View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0825_high_14 (Length: 251)
Name: NF0825_high_14
Description: NF0825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0825_high_14 |
 | |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 47429711 - 47429491
Alignment:
| Q |
1 |
ttcgaaatagctaacgatggttagttaatatccttgactagatcaaagccaaacccaaaacactacaacagcatagagatnnnnnnntccaagtcaacac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
47429711 |
ttcgaaatagctaacgatggttagttaatatccttgactagatcaaagccaaacccaaaacactacaacagcatagagataaaaaa-tccaagtcaacac |
47429613 |
T |
|
| Q |
101 |
aacatttttaattaatttgtgctaatttataatttatgttaacattaaactgaattagagttaagcaattaaatactgcatttgatcatcaaaatcataa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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|
| T |
47429612 |
aacatttttaattaatttgtgctaatttataatttatgttaacattaaactgaattagagttaagcaattaaatactgcatttaatcatcaaaatcataa |
47429513 |
T |
|
| Q |
201 |
ttcatcttctaagactaaaatg |
222 |
Q |
| |
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|||||||||||||||||||||| |
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|
| T |
47429512 |
ttcatcttctaagactaaaatg |
47429491 |
T |
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