View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0825_high_17 (Length: 250)

Name: NF0825_high_17
Description: NF0825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0825_high_17
NF0825_high_17
[»] chr5 (28 HSPs)
chr5 (31-222)||(18741227-18741426)
chr5 (25-64)||(18855850-18855889)
chr5 (23-64)||(10989083-10989124)
chr5 (23-64)||(16347378-16347419)
chr5 (25-66)||(38132577-38132618)
chr5 (24-64)||(3000982-3001022)
chr5 (24-64)||(3302087-3302127)
chr5 (25-64)||(408494-408533)
chr5 (25-64)||(4496627-4496666)
chr5 (25-64)||(7678720-7678759)
chr5 (25-64)||(12492384-12492423)
chr5 (25-64)||(13606997-13607036)
chr5 (25-64)||(14665955-14665994)
chr5 (25-64)||(28411919-28411958)
chr5 (25-64)||(28976859-28976898)
chr5 (25-64)||(29816625-29816664)
chr5 (25-63)||(4653496-4653534)
chr5 (25-63)||(14668015-14668053)
chr5 (23-64)||(218050-218091)
chr5 (27-64)||(3442873-3442910)
chr5 (25-58)||(36123182-36123215)
chr5 (25-61)||(7359261-7359297)
chr5 (23-63)||(9234130-9234170)
chr5 (24-64)||(10124387-10124427)
chr5 (24-64)||(27386583-27386623)
chr5 (25-61)||(29929300-29929336)
chr5 (24-60)||(32489293-32489329)
chr5 (24-64)||(43557832-43557872)
[»] chr3 (31 HSPs)
chr3 (23-64)||(14415258-14415299)
chr3 (24-66)||(15296148-15296190)
chr3 (23-64)||(31566159-31566200)
chr3 (24-64)||(27192466-27192506)
chr3 (23-63)||(30797820-30797860)
chr3 (25-64)||(311309-311348)
chr3 (25-64)||(5169075-5169114)
chr3 (25-64)||(12096705-12096744)
chr3 (25-64)||(31454225-31454264)
chr3 (25-60)||(36764932-36764967)
chr3 (25-64)||(37083292-37083331)
chr3 (25-64)||(38060957-38060996)
chr3 (25-64)||(39512786-39512825)
chr3 (25-64)||(48259947-48259986)
chr3 (25-64)||(48508478-48508517)
chr3 (25-64)||(48532201-48532240)
chr3 (25-64)||(52139043-52139082)
chr3 (25-64)||(53262384-53262423)
chr3 (25-63)||(3987578-3987616)
chr3 (25-63)||(35701093-35701131)
chr3 (23-61)||(40106618-40106656)
chr3 (23-57)||(50891993-50892027)
chr3 (25-62)||(2133612-2133649)
chr3 (22-63)||(31337557-31337598)
chr3 (23-64)||(47233594-47233635)
chr3 (25-62)||(54128624-54128661)
chr3 (24-64)||(24778608-24778648)
chr3 (28-64)||(41530004-41530040)
chr3 (24-64)||(43396081-43396121)
chr3 (24-60)||(45289090-45289126)
chr3 (25-61)||(45374477-45374513)
[»] chr8 (33 HSPs)
chr8 (21-61)||(32838887-32838927)
chr8 (25-64)||(39953264-39953303)
chr8 (25-62)||(16008395-16008432)
chr8 (25-65)||(24837933-24837973)
chr8 (24-64)||(44529468-44529508)
chr8 (24-64)||(45419478-45419518)
chr8 (25-64)||(1064963-1065002)
chr8 (25-64)||(1928587-1928626)
chr8 (27-62)||(5205420-5205455)
chr8 (25-64)||(9842363-9842402)
chr8 (25-64)||(11523723-11523762)
chr8 (25-64)||(14742082-14742121)
chr8 (25-64)||(25473403-25473442)
chr8 (25-64)||(30198266-30198305)
chr8 (25-64)||(31309596-31309635)
chr8 (25-64)||(32569710-32569749)
chr8 (25-64)||(35324016-35324055)
chr8 (25-64)||(36545392-36545431)
chr8 (25-64)||(41031420-41031459)
chr8 (25-64)||(41031526-41031565)
chr8 (25-64)||(42584601-42584640)
chr8 (25-63)||(1489753-1489791)
chr8 (26-64)||(18473973-18474011)
chr8 (24-62)||(26363731-26363769)
chr8 (23-61)||(35914599-35914637)
chr8 (25-63)||(39651028-39651066)
chr8 (31-64)||(18741875-18741908)
chr8 (31-64)||(18746839-18746872)
chr8 (25-58)||(39947097-39947130)
chr8 (22-74)||(2938326-2938378)
chr8 (24-64)||(4061906-4061946)
chr8 (23-63)||(4213049-4213089)
chr8 (25-61)||(44047532-44047568)
[»] chr1 (41 HSPs)
chr1 (24-64)||(28533710-28533750)
chr1 (25-64)||(4029365-4029404)
chr1 (25-64)||(28090694-28090733)
chr1 (21-64)||(29975442-29975485)
chr1 (22-64)||(2544836-2544878)
chr1 (25-63)||(51440765-51440803)
chr1 (23-64)||(52921323-52921364)
chr1 (25-61)||(7922071-7922107)
chr1 (24-64)||(49347392-49347432)
chr1 (25-64)||(696513-696552)
chr1 (25-64)||(1210988-1211027)
chr1 (25-64)||(4707221-4707260)
chr1 (25-64)||(8796452-8796491)
chr1 (25-64)||(8809501-8809540)
chr1 (25-64)||(25979231-25979270)
chr1 (25-64)||(26299311-26299350)
chr1 (24-67)||(28545903-28545946)
chr1 (25-64)||(29577495-29577534)
chr1 (25-64)||(30202130-30202169)
chr1 (25-64)||(34444599-34444638)
chr1 (25-64)||(38758020-38758059)
chr1 (25-64)||(38807671-38807710)
chr1 (25-64)||(41560472-41560511)
chr1 (23-62)||(43028806-43028845)
chr1 (25-64)||(43481798-43481837)
chr1 (25-64)||(44941776-44941815)
chr1 (21-64)||(46423212-46423255)
chr1 (24-58)||(4380208-4380242)
chr1 (26-64)||(52561590-52561628)
chr1 (23-64)||(12231601-12231642)
chr1 (23-64)||(21769709-21769750)
chr1 (23-64)||(25715324-25715365)
chr1 (26-63)||(27850177-27850214)
chr1 (27-64)||(37462878-37462915)
chr1 (25-62)||(41017217-41017254)
chr1 (23-60)||(42337803-42337840)
chr1 (25-61)||(1704873-1704909)
chr1 (28-64)||(8725812-8725848)
chr1 (23-63)||(35828560-35828600)
chr1 (24-64)||(37831616-37831656)
chr1 (24-60)||(40568409-40568445)
[»] chr4 (41 HSPs)
chr4 (25-64)||(28236425-28236464)
chr4 (19-64)||(27450174-27450219)
chr4 (23-64)||(49416950-49416991)
chr4 (24-64)||(48622542-48622582)
chr4 (24-64)||(49686936-49686976)
chr4 (25-64)||(436472-436511)
chr4 (25-64)||(1211392-1211431)
chr4 (25-64)||(8327144-8327183)
chr4 (25-64)||(21528531-21528570)
chr4 (22-61)||(23906294-23906333)
chr4 (25-64)||(30634106-30634145)
chr4 (25-64)||(31959814-31959853)
chr4 (25-64)||(35690514-35690553)
chr4 (25-64)||(39100536-39100575)
chr4 (25-64)||(44719361-44719400)
chr4 (25-64)||(45209205-45209244)
chr4 (25-64)||(46153951-46153990)
chr4 (25-64)||(50238615-50238654)
chr4 (25-64)||(50238701-50238740)
chr4 (25-60)||(51051455-51051490)
chr4 (25-64)||(52569515-52569554)
chr4 (25-64)||(55007989-55008028)
chr4 (25-64)||(56130413-56130452)
chr4 (25-64)||(56375533-56375572)
chr4 (25-63)||(36556760-36556798)
chr4 (27-64)||(20047677-20047714)
chr4 (23-64)||(28348300-28348341)
chr4 (23-64)||(29209173-29209214)
chr4 (25-66)||(30662043-30662084)
chr4 (27-64)||(50059492-50059529)
chr4 (25-61)||(12494909-12494945)
chr4 (25-61)||(15665347-15665383)
chr4 (25-61)||(19154863-19154899)
chr4 (25-61)||(22420717-22420753)
chr4 (28-64)||(32745831-32745867)
chr4 (23-59)||(38789621-38789657)
chr4 (28-64)||(44940739-44940775)
chr4 (25-61)||(48174093-48174129)
chr4 (24-64)||(49738549-49738589)
chr4 (22-62)||(50471772-50471812)
chr4 (25-61)||(50869880-50869916)
[»] chr2 (33 HSPs)
chr2 (22-64)||(38452683-38452725)
chr2 (23-64)||(2073305-2073346)
chr2 (23-64)||(12474925-12474966)
chr2 (25-64)||(227432-227471)
chr2 (25-64)||(3635323-3635362)
chr2 (25-64)||(4807838-4807877)
chr2 (25-64)||(8560806-8560845)
chr2 (25-64)||(9531600-9531639)
chr2 (25-64)||(10403893-10403932)
chr2 (25-64)||(12489802-12489841)
chr2 (25-64)||(12520062-12520101)
chr2 (25-64)||(15775845-15775884)
chr2 (25-64)||(17670711-17670750)
chr2 (24-59)||(18424377-18424412)
chr2 (25-64)||(25834921-25834960)
chr2 (25-64)||(28508921-28508960)
chr2 (25-64)||(30306275-30306314)
chr2 (25-64)||(35643191-35643230)
chr2 (25-64)||(37520689-37520728)
chr2 (25-64)||(38328370-38328409)
chr2 (25-64)||(38429652-38429691)
chr2 (25-64)||(41763043-41763082)
chr2 (25-64)||(43573130-43573169)
chr2 (25-64)||(44437721-44437760)
chr2 (26-64)||(3243654-3243692)
chr2 (24-62)||(13474213-13474251)
chr2 (24-61)||(11992107-11992144)
chr2 (25-62)||(12734945-12734982)
chr2 (27-64)||(39029830-39029867)
chr2 (28-64)||(13726967-13727003)
chr2 (24-64)||(16521006-16521046)
chr2 (24-64)||(17429293-17429333)
chr2 (28-64)||(20935447-20935483)
[»] chr7 (39 HSPs)
chr7 (23-64)||(40979926-40979967)
chr7 (12-64)||(27649023-27649075)
chr7 (25-61)||(45840996-45841032)
chr7 (25-64)||(1011289-1011328)
chr7 (25-64)||(2885722-2885761)
chr7 (25-64)||(11594203-11594242)
chr7 (25-64)||(12841275-12841314)
chr7 (25-64)||(14593995-14594034)
chr7 (25-64)||(16013518-16013557)
chr7 (25-64)||(21244283-21244322)
chr7 (25-64)||(28208328-28208367)
chr7 (25-64)||(29650627-29650666)
chr7 (25-64)||(31005448-31005487)
chr7 (25-64)||(31682602-31682641)
chr7 (25-64)||(31869102-31869141)
chr7 (25-64)||(32631807-32631846)
chr7 (25-64)||(37618188-37618227)
chr7 (25-64)||(39906372-39906411)
chr7 (21-64)||(41157898-41157941)
chr7 (25-64)||(41483730-41483769)
chr7 (25-64)||(43491551-43491590)
chr7 (25-64)||(44855174-44855213)
chr7 (25-64)||(47652790-47652829)
chr7 (25-64)||(48515518-48515557)
chr7 (26-64)||(34745990-34746028)
chr7 (26-64)||(38103616-38103654)
chr7 (25-63)||(43423991-43424029)
chr7 (27-64)||(6263502-6263539)
chr7 (21-58)||(33732081-33732118)
chr7 (23-64)||(35734689-35734730)
chr7 (27-64)||(48735683-48735720)
chr7 (28-64)||(6375111-6375147)
chr7 (25-61)||(6807737-6807773)
chr7 (24-64)||(25579102-25579142)
chr7 (25-61)||(28355412-28355448)
chr7 (25-61)||(29012337-29012373)
chr7 (25-61)||(33650870-33650906)
chr7 (25-61)||(36101777-36101813)
chr7 (25-61)||(47413715-47413751)
[»] chr6 (11 HSPs)
chr6 (23-64)||(9707013-9707054)
chr6 (25-61)||(34505-34541)
chr6 (24-64)||(34934829-34934869)
chr6 (25-64)||(3206459-3206498)
chr6 (25-64)||(5258148-5258187)
chr6 (25-64)||(12890818-12890857)
chr6 (25-64)||(28085619-28085658)
chr6 (25-64)||(33730208-33730247)
chr6 (26-64)||(608404-608442)
chr6 (22-64)||(1615220-1615262)
chr6 (25-62)||(10098896-10098933)
[»] scaffold0168 (1 HSPs)
scaffold0168 (25-64)||(28889-28928)
[»] scaffold0018 (1 HSPs)
scaffold0018 (25-64)||(31711-31750)
[»] scaffold0491 (1 HSPs)
scaffold0491 (31-64)||(3680-3713)
[»] scaffold0041 (1 HSPs)
scaffold0041 (23-64)||(16821-16862)
[»] scaffold0157 (1 HSPs)
scaffold0157 (25-61)||(25532-25568)
[»] scaffold0024 (1 HSPs)
scaffold0024 (24-64)||(82961-83001)


Alignment Details
Target: chr5 (Bit Score: 131; Significance: 5e-68; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 31 - 222
Target Start/End: Original strand, 18741227 - 18741426
Alignment:
Q  31 acaaccaagtcttataccactaagtggggtcggccaaaagtagaatctcatcatatgggtagacactatcaagtcattcataactgaaacactgtcacta 130  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||| |||| ||||||||| ||||||||||    
T  18741227 acaaccaagtcttatcccactaagtgggatcggccaaaagtagaatctcatcacatgagtagacactatcaagtaattcctaactgaaaaactgtcacta 18741326  T
Q  131 actgattttgtttcagttagt--------tacaagattctagatgaatgtaaactaaacaggtaaaggctacagattagctagagaaccatatccataac 222  Q
    ||||||| |||||||||||||        |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18741327 actgattctgtttcagttagttacagcagtacacgattctagatgaatgtaaactaaacaggtaaaggctacagactagctagagaaccatatccataac 18741426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 18855889 - 18855850
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  18855889 acaacaacaaccaagtcttatcccactaagtggggtcggc 18855850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 10989083 - 10989124
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  10989083 atacaacaacaaccaagccttatcccactaagtggggtcggc 10989124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 16347378 - 16347419
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  16347378 atacaacaacaaccaagtcttatcccactaagtagggtcggc 16347419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 38132618 - 38132577
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggcca 66  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  38132618 acaacaacaaccaagccttatcccactaagtggggtcggcca 38132577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 3001022 - 3000982
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  3001022 tacaacaacaaccaagccttatcccactaagtggggtcggc 3000982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 3302127 - 3302087
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  3302127 tacaacaacaaccaagccttatcccactaagtggggtcggc 3302087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 408494 - 408533
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  408494 acaacaacaaccaagccttatcccactaagtggggtcggc 408533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 4496666 - 4496627
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  4496666 acaacaacaaccaagccttatcccactaagtggggtcggc 4496627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 7678759 - 7678720
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  7678759 acaacaacaaccaagttttatcccactaagtggggtcggc 7678720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 12492384 - 12492423
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  12492384 acaacaacaaccaagccttatcccactaagtggggtcggc 12492423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 13606997 - 13607036
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  13606997 acaacaacaaccaagccttatcccactaagtggggtcggc 13607036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 14665994 - 14665955
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  14665994 acaacaacaaccaagccttatcccactaagtggggtcggc 14665955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 28411958 - 28411919
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  28411958 acaacaacaaccaagccttatcccactaagtggggtcggc 28411919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 28976859 - 28976898
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  28976859 acaacaacaaccaagccttatcccactaagtggggtcggc 28976898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 29816664 - 29816625
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  29816664 acaacaacaaccaagccttatcccactaagtggggtcggc 29816625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 4653534 - 4653496
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcgg 63  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  4653534 acaacaacaaccaagtcttatctcactaagtggggtcgg 4653496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 14668053 - 14668015
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcgg 63  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  14668053 acaactacaaccaagtcttatcccactaagtggggtcgg 14668015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 218050 - 218091
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||| |||||||||||||||| |||||| |||||||||||    
T  218050 atacaataacaaccaagtcttatcccactaggtggggtcggc 218091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 3442873 - 3442910
Alignment:
Q  27 aacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  3442873 aacaacaaccaagccttatgccactaagtggggtcggc 3442910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 36123182 - 36123215
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggg 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  36123182 acaacaacaaccaagtcttatcccactaagtggg 36123215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 7359261 - 7359297
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||||||| | |||||||||||||||    
T  7359261 acaacaacaaccaagtcttgtcccactaagtggggtc 7359297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 9234170 - 9234130
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcgg 63  Q
    |||||||||||| |||| ||||| |||||||||||||||||    
T  9234170 atacaacaacaatcaagccttatcccactaagtggggtcgg 9234130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 10124387 - 10124427
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||| ||||| |||||||||||| |||||    
T  10124387 tacaacaacaaccaagccttatcccactaagtgggttcggc 10124427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 27386623 - 27386583
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||| | ||||| ||||||||||||||||||    
T  27386623 tacaacaacaaccatgccttatcccactaagtggggtcggc 27386583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 29929336 - 29929300
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  29929336 acaacaacaaccaagccttatcccactaagtggggtc 29929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 32489329 - 32489293
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggt 60  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  32489329 tacaacaacaaccaagccttatcccactaagtggggt 32489293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 43557832 - 43557872
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||| | ||||| ||||||||||||||||||    
T  43557832 tacaacaacaaccaggccttatcccactaagtggggtcggc 43557872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 14415258 - 14415299
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  14415258 atacaacaacaaccaagtcttatcccactaagtggggtcggc 14415299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 15296190 - 15296148
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggcca 66  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  15296190 tacaacaacaaccaagccttatcccactaagtggggtcggcca 15296148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 31566159 - 31566200
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  31566159 atacaacaacaaccaagccttatcccactaagtggggtcggc 31566200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 27192506 - 27192466
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  27192506 tacaacaacaaccaagccttatcccactaagtggggtcggc 27192466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 30797820 - 30797860
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcgg 63  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  30797820 atacaacaacaaccaagccttattccactaagtggggtcgg 30797860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 311309 - 311348
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  311309 acaacaacaaccaagccttatcccactaagtggggtcggc 311348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 5169114 - 5169075
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  5169114 acaacaacaaccaagccttatcccactaagtggggtcggc 5169075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 12096705 - 12096744
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  12096705 acaacaacaaccaagccttatcccactaagtggggtcggc 12096744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 31454225 - 31454264
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  31454225 acaacaacaaccaagccttatcccactaagtggggtcggc 31454264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 36764967 - 36764932
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggt 60  Q
    ||||||||||||||| ||||||||||||||||||||    
T  36764967 acaacaacaaccaagccttataccactaagtggggt 36764932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 37083292 - 37083331
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  37083292 acaacaacaaccaagccttatcccactaagtggggtcggc 37083331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 38060996 - 38060957
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  38060996 acaacaacaaccaattcttatcccactaagtggggtcggc 38060957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 39512825 - 39512786
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  39512825 acaacaacaaccaagccttatcccactaagtggggtcggc 39512786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 48259986 - 48259947
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  48259986 acaacaacaaccaagccttatcccactaagtggggtcggc 48259947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 48508517 - 48508478
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  48508517 acaacaacaaccaagccttatcccactaagtggggtcggc 48508478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 48532240 - 48532201
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  48532240 acaacaacaaccaagccttatcccactaagtggggtcggc 48532201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 52139082 - 52139043
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  52139082 acaacaacaaccaagccttatcccactaagtggggtcggc 52139043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 53262423 - 53262384
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  53262423 acaacaacaaccaagccttatcccactaagtggggtcggc 53262384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 3987616 - 3987578
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcgg 63  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  3987616 acaacaacaaccaagtcttatcccacaaagtggggtcgg 3987578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 35701131 - 35701093
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcgg 63  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  35701131 acaacaacaaccaagccttatcccactaagtggggtcgg 35701093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 40106618 - 40106656
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  40106618 atacaacaacaaccaagccttatcccactaagtggggtc 40106656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 50892027 - 50891993
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtgg 57  Q
    ||||||||||||||||||||||| |||||||||||    
T  50892027 atacaacaacaaccaagtcttatcccactaagtgg 50891993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 2133612 - 2133649
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcg 62  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  2133612 acaacaacaaccaagccttatcccactaagtggggtcg 2133649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 31337557 - 31337598
Alignment:
Q  22 tatacaacaacaaccaagtcttataccactaagtggggtcgg 63  Q
    ||||||||||||||||||  ||||||||||||||| ||||||    
T  31337557 tatacaacaacaaccaagctttataccactaagtgaggtcgg 31337598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 47233594 - 47233635
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||    
T  47233594 atacaacaacaaccaagccttatcccactaactggggtcggc 47233635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 54128661 - 54128624
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcg 62  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  54128661 acaacaacaaccaagccttatcccactaagtggggtcg 54128624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 24778608 - 24778648
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||| ||||| ||||| ||||||||||||||||||    
T  24778608 tacaacaacagccaagccttatcccactaagtggggtcggc 24778648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 41530040 - 41530004
Alignment:
Q  28 acaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  41530040 acaacaaccaagccttatcccactaagtggggtcggc 41530004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 43396081 - 43396121
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  43396081 tacaacaacaaccaagctttatcccactaagtggggtcggc 43396121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 45289090 - 45289126
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggt 60  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  45289090 tacaacaacaaccaagccttatcccactaagtggggt 45289126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 45374477 - 45374513
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  45374477 acaacaacaaccaagccttatcccactaagtggggtc 45374513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 32838887 - 32838927
Alignment:
Q  21 atatacaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  32838887 atatacaacaacaaccaagtcttatcccactaagtggggtc 32838927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 39953264 - 39953303
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  39953264 acaacaacaaccaagtcttatcccactaagtggggtcggc 39953303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 16008395 - 16008432
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcg 62  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  16008395 acaacaacaaccaagtcttatcccactaagtggggtcg 16008432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 24837973 - 24837933
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggcc 65  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  24837973 acaacaacaaccaagccttatcccactaagtggggtcggcc 24837933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 44529508 - 44529468
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  44529508 tacaacaacaaccaagccttatcccactaagtggggtcggc 44529468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 45419518 - 45419478
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  45419518 tacaacaacaaccaagccttatcccactaagtggggtcggc 45419478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 1065002 - 1064963
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  1065002 acaacaacaaccaagccttatcccactaagtggggtcggc 1064963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 1928587 - 1928626
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  1928587 acaacaacaaccaagccttatcccactaagtggggtcggc 1928626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 5205455 - 5205420
Alignment:
Q  27 aacaacaaccaagtcttataccactaagtggggtcg 62  Q
    ||||||||||||||||||| ||||||||||||||||    
T  5205455 aacaacaaccaagtcttatcccactaagtggggtcg 5205420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 9842402 - 9842363
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  9842402 acaacaacaaccaagccttatgccactaagtggggtcggc 9842363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 11523723 - 11523762
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  11523723 acaacaacaaccaagccttatcccactaagtggggtcggc 11523762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 14742082 - 14742121
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  14742082 acaacaacaaccaagccttatcccactaagtggggtcggc 14742121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 25473403 - 25473442
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  25473403 acaacaacaaccaagccttatcccactaagtggggtcggc 25473442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 30198266 - 30198305
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  30198266 acaacaacaaccaagccttatcccactaagtggggtcggc 30198305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 31309635 - 31309596
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  31309635 acaacaacaaccaagtcttatcccactaagtggtgtcggc 31309596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 32569710 - 32569749
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||||| ||||||| ||||||||||    
T  32569710 acaacaacaaccaagtcttatcccactaaatggggtcggc 32569749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 35324055 - 35324016
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  35324055 acaacaacaaccaagccttatcccactaagtggggtcggc 35324016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 36545431 - 36545392
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  36545431 acaacaacaaccaagccttatcccactaagtggggtcggc 36545392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 41031420 - 41031459
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  41031420 acaacaacaaccaagccttatcccactaagtggggtcggc 41031459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 41031526 - 41031565
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  41031526 acaacaacaaccaagccttatcccactaagtggggtcggc 41031565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 42584640 - 42584601
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  42584640 acaacaacaatcaagtcttatcccactaagtggggtcggc 42584601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 1489791 - 1489753
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcgg 63  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  1489791 acaataacaaccaagtcttatcccactaagtggggtcgg 1489753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 18473973 - 18474011
Alignment:
Q  26 caacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  18473973 caacaacaaccaagtcttatcccactaagtggtgtcggc 18474011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 26363769 - 26363731
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcg 62  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  26363769 tacaacaacaaccaagtcttatcccactgagtggggtcg 26363731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 35914599 - 35914637
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtc 61  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  35914599 atacaacaacaaccaagtcttatctcactaagtggggtc 35914637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 39651028 - 39651066
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcgg 63  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  39651028 acaacaacaaccaagccttatcccactaagtggggtcgg 39651066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 18741908 - 18741875
Alignment:
Q  31 acaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||||||||||||||||    
T  18741908 acaaccaagtcttatcccactaagtggggtcggc 18741875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 18746872 - 18746839
Alignment:
Q  31 acaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||||||||||||||||    
T  18746872 acaaccaagtcttatcccactaagtggggtcggc 18746839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 39947130 - 39947097
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggg 58  Q
    ||||||||||||||||||||| ||||||||||||    
T  39947130 acaacaacaaccaagtcttatcccactaagtggg 39947097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 2938378 - 2938326
Alignment:
Q  22 tatacaacaacaaccaagtcttataccactaagtggggtcggccaaaagtaga 74  Q
    |||||||||||||||||| ||||  |||||||||||||| ||| |||| ||||    
T  2938378 tatacaacaacaaccaagccttaacccactaagtggggtaggctaaaaataga 2938326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 4061946 - 4061906
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||| ||| | ||||||||||||||||||    
T  4061946 tacaacaacaaccaagcctttttccactaagtggggtcggc 4061906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 4213049 - 4213089
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcgg 63  Q
    ||||||||||||||||| ||||| ||| |||||||||||||    
T  4213049 atacaacaacaaccaagccttattccattaagtggggtcgg 4213089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 44047532 - 44047568
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  44047532 acaacaacaaccaagccttatcccactaagtggggtc 44047568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 28533750 - 28533710
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  28533750 tacaacaacaaccaagtcttatcccactaagtggggtcggc 28533710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 4029404 - 4029365
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  4029404 acaacaacaaccaagtcttatcccactaagtggggtcggc 4029365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 28090694 - 28090733
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  28090694 acaacaacaaccaagtcttatcccactaagtggggtcggc 28090733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 29975485 - 29975442
Alignment:
Q  21 atatacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  29975485 atatacaacaacaaccaagccttatcccactaagtggggtcggc 29975442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 2544878 - 2544836
Alignment:
Q  22 tatacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  2544878 tatacaacaacaaccaagccttttaccactaagtggggtcggc 2544836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 51440765 - 51440803
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcgg 63  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  51440765 acaacaacaaccaagtcttatcccactaagtggggtcgg 51440803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 52921364 - 52921323
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  52921364 atacaacaacaaccaagccttatcccactaagtggggtcggc 52921323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 7922107 - 7922071
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||||||||| |||||||||||||||    
T  7922107 acaacaacaaccaagtcttatcccactaagtggggtc 7922071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 49347392 - 49347432
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  49347392 tacaacaacaaccaagccttatcccactaagtggggtcggc 49347432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 696552 - 696513
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  696552 acaacaacaaccaagccttatcccactaagtggggtcggc 696513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 1211027 - 1210988
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  1211027 acaacaacaaccaagccttatcccactaagtggggtcggc 1210988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 4707221 - 4707260
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  4707221 acaacaacaaccaagccttatcccactaagtggggtcggc 4707260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 8796491 - 8796452
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  8796491 acaacaacaaccaagccttatcccactaagtggggtcggc 8796452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 8809501 - 8809540
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  8809501 acaacaacaaccaagccttatcccactaagtggggtcggc 8809540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 25979231 - 25979270
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  25979231 acaacaacaaccaagccttatcccactaagtggggtcggc 25979270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 26299350 - 26299311
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||| |||||||||||||| ||||||||||||||||||    
T  26299350 acaacagcaaccaagtcttatcccactaagtggggtcggc 26299311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 28545946 - 28545903
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggccaa 67  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||    
T  28545946 tacaacaacaaccgagttttattccactaagtggggtcggccaa 28545903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 29577534 - 29577495
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  29577534 acaacaacaaccaagccttatcccactaagtggggtcggc 29577495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 30202130 - 30202169
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  30202130 acaacaacaaccaagccttatcccactaagtggggtcggc 30202169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 34444638 - 34444599
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  34444638 acaacaacaaccaagccttatcccactaagtggggtcggc 34444599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 38758020 - 38758059
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  38758020 acaacaacaaccaagccttatcccactaagtggggtcggc 38758059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 38807671 - 38807710
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  38807671 acaacaacaaccaagccttatcccactaagtggggtcggc 38807710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 41560511 - 41560472
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  41560511 acaacaacaaccaagccttatcccactaagtggggtcggc 41560472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 43028806 - 43028845
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcg 62  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  43028806 atacaacaacaaccaagccttatcccactaagtggggtcg 43028845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 43481798 - 43481837
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  43481798 acaacaacaaccaagccttatcccactaagtggggtcggc 43481837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 44941776 - 44941815
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  44941776 acaacaacaaccaagccttatcccactaagtggggtcggc 44941815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 46423212 - 46423255
Alignment:
Q  21 atatacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||| || ||||| ||||||||||||||||||    
T  46423212 atatacaacaacaaccgagccttatcccactaagtggggtcggc 46423255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 4380242 - 4380208
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggg 58  Q
    |||||||||||||||||||||| ||||||||||||    
T  4380242 tacaacaacaaccaagtcttatcccactaagtggg 4380208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 52561590 - 52561628
Alignment:
Q  26 caacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  52561590 caacaacaaccaagccttatcccactaagtggggtcggc 52561628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 12231642 - 12231601
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||| ||||| | ||||||||||||||||    
T  12231642 atacaacaacaaccaagccttatcctactaagtggggtcggc 12231601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 21769709 - 21769750
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||| |||||  |||||||||||||||||    
T  21769709 atacaacaacaaccaagccttatcacactaagtggggtcggc 21769750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 25715324 - 25715365
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||| ||||| |||||||||| |||||||    
T  25715324 atacaacaacaaccaagccttatcccactaagtgaggtcggc 25715365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 27850177 - 27850214
Alignment:
Q  26 caacaacaaccaagtcttataccactaagtggggtcgg 63  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  27850177 caacaacaaccaagtcttatcccattaagtggggtcgg 27850214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 37462878 - 37462915
Alignment:
Q  27 aacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  37462878 aacaacaaccaagccttatcccactaagtggggtcggc 37462915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 41017217 - 41017254
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcg 62  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  41017217 acaacaacaaccaagtcttattccactaagtggagtcg 41017254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 42337840 - 42337803
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggt 60  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  42337840 atacaacaacaaccaagccttatcccactaagtggggt 42337803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 1704909 - 1704873
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    |||||||||||||||||||||  ||||||||||||||    
T  1704909 acaacaacaaccaagtcttatcacactaagtggggtc 1704873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 8725812 - 8725848
Alignment:
Q  28 acaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  8725812 acaacaaccaagccttatcccactaagtggggtcggc 8725848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 35828560 - 35828600
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcgg 63  Q
    ||||||||||||||||||||| | |||||||| ||||||||    
T  35828560 atacaacaacaaccaagtcttttcccactaagcggggtcgg 35828600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 37831656 - 37831616
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||| |||||||||| ||||| ||||||||||||||||||    
T  37831656 tacaaaaacaaccaagccttatcccactaagtggggtcggc 37831616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 40568409 - 40568445
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggt 60  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  40568409 tacaacaacaaccaagccttatcccactaagtggggt 40568445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 28236464 - 28236425
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  28236464 acaacaacaaccaagtcttatcccactaagtggggtcggc 28236425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 27450174 - 27450219
Alignment:
Q  19 aaatatacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||| |||||||| ||||| ||||||||||||||||||    
T  27450174 aaatatacaacagcaaccaagccttatcccactaagtggggtcggc 27450219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 49416991 - 49416950
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  49416991 atacaacaacaaccaagccttatcccactaagtggggtcggc 49416950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 48622542 - 48622582
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  48622542 tacaacaacaaccaagccttatcccactaagtggggtcggc 48622582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 49686976 - 49686936
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  49686976 tacagcaacaaccaagtcttatcccactaagtggggtcggc 49686936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 436511 - 436472
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  436511 acaacaacaaccaagccttatcccactaagtggggtcggc 436472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 1211392 - 1211431
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  1211392 acaacaacaaccaagtcttatcccattaagtggggtcggc 1211431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 8327183 - 8327144
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  8327183 acaacaacaaccaagccttatcccactaagtggggtcggc 8327144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 21528570 - 21528531
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  21528570 acaacaacaaccaagccttatcccactaagtggggtcggc 21528531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 23906294 - 23906333
Alignment:
Q  22 tatacaacaacaaccaagtcttataccactaagtggggtc 61  Q
    |||||||||||||||||| ||||| |||||||||||||||    
T  23906294 tatacaacaacaaccaagccttatcccactaagtggggtc 23906333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 30634106 - 30634145
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  30634106 acaacaacaaccaagccttatcccactaagtggggtcggc 30634145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 31959814 - 31959853
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  31959814 acaacaacaaccaagccttatcccactaagtggggtcggc 31959853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 35690553 - 35690514
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  35690553 acaacaaaaaccaagtcttatcccactaagtggggtcggc 35690514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 39100536 - 39100575
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  39100536 acaacaacaaccaagccttatcccactaagtggggtcggc 39100575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 44719361 - 44719400
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  44719361 acaacaacaaccaagtcttatcccactaagtagggtcggc 44719400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 45209205 - 45209244
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  45209205 acaacaacaaccaagccttatcccactaagtggggtcggc 45209244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 46153990 - 46153951
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  46153990 acaacaacaaccaagccttatcccactaagtggggtcggc 46153951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 50238615 - 50238654
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  50238615 acaacaacaaccaagccttatcccactaagtggggtcggc 50238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 50238701 - 50238740
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  50238701 acaacaacaaccaagccttatcccactaagtggggtcggc 50238740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 51051455 - 51051490
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggt 60  Q
    ||||||||||||||||||||| ||||||||||||||    
T  51051455 acaacaacaaccaagtcttatcccactaagtggggt 51051490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 52569515 - 52569554
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  52569515 acaacaacaaccaagccttatcccactaagtggggtcggc 52569554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 55008028 - 55007989
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  55008028 acaacaacaaccaagccttatcccactaagtggggtcggc 55007989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 56130452 - 56130413
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  56130452 acaacaacaaccaagccttatcccactaagtggggtcggc 56130413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 56375572 - 56375533
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  56375572 acaacaacaaccaagtcttatcccactaagtgaggtcggc 56375533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 36556760 - 36556798
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcgg 63  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  36556760 acaacaacaaccaagtcttatcccacaaagtggggtcgg 36556798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 20047714 - 20047677
Alignment:
Q  27 aacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  20047714 aacaacaaccaagtcttatcccactaagtggggccggc 20047677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 28348341 - 28348300
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||| ||||| |||||||| |||||||||    
T  28348341 atacaacaacaaccaagccttatcccactaagcggggtcggc 28348300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 29209173 - 29209214
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||| |||||||||||||||| ||| ||||||||||||||    
T  29209173 atacaaaaacaaccaagtcttatcccattaagtggggtcggc 29209214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 30662043 - 30662084
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggcca 66  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||    
T  30662043 acaacaacaaccaagtcttatcccactaagtagggtcagcca 30662084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 50059492 - 50059529
Alignment:
Q  27 aacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  50059492 aacaacaacaaagtcttatcccactaagtggggtcggc 50059529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 12494945 - 12494909
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  12494945 acaacaacaaccaagccttatcccactaagtggggtc 12494909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 15665383 - 15665347
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  15665383 acaacaacaaccaagccttatcccactaagtggggtc 15665347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 19154863 - 19154899
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  19154863 acaacaacaaccaagccttatcccactaagtggggtc 19154899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 22420717 - 22420753
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  22420717 acaacaacaaccaagccttatcccactaagtggggtc 22420753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 32745867 - 32745831
Alignment:
Q  28 acaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  32745867 acaacaaccaagccttatcccactaagtggggtcggc 32745831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 38789621 - 38789657
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtgggg 59  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  38789621 atacaacaacaaccaagccttatcccactaagtgggg 38789657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 44940775 - 44940739
Alignment:
Q  28 acaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  44940775 acaacaaccaagacttatcccactaagtggggtcggc 44940739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 48174093 - 48174129
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  48174093 acaacaacaaccaagccttatcccactaagtggggtc 48174129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 49738549 - 49738589
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||| ||||| ||||||| ||||||||||    
T  49738549 tacaacaacaaccaagccttatcccactaaatggggtcggc 49738589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 50471812 - 50471772
Alignment:
Q  22 tatacaacaacaaccaagtcttataccactaagtggggtcg 62  Q
    ||||||||||||||||||  |||| ||||||||||||||||    
T  50471812 tatacaacaacaaccaagcgttatcccactaagtggggtcg 50471772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 50869880 - 50869916
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  50869880 acaacaacaaccaagccttatcccactaagtggggtc 50869916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 38452683 - 38452725
Alignment:
Q  22 tatacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  38452683 tatacaacaacaaccaagccttatcccactaagtggggtcggc 38452725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 2073305 - 2073346
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  2073305 atacaacaacaaccaagccttatcccactaagtggggtcggc 2073346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 12474925 - 12474966
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  12474925 atacaacaacaaccaagccttatcccactaagtggggtcggc 12474966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 227471 - 227432
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  227471 acaacaacaaccaagccttatcccactaagtggggtcggc 227432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 3635323 - 3635362
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  3635323 acaacaacaaccaagccttatcccactaagtggggtcggc 3635362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 4807877 - 4807838
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  4807877 acaacaacaaccaagccttatcccactaagtggggtcggc 4807838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 8560806 - 8560845
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  8560806 acaacaacaaccaagtcttatcccactaagttgggtcggc 8560845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 9531600 - 9531639
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  9531600 acaacaacaaccaagccttatcccactaagtggggtcggc 9531639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 10403893 - 10403932
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  10403893 acaacaacaaccaagccttatcccactaagtggggtcggc 10403932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 12489802 - 12489841
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  12489802 acaacaacaaccaagccttatcccactaagtggggtcggc 12489841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 12520062 - 12520101
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  12520062 acaacaacaaccaagccttatcccactaagtggggtcggc 12520101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 15775845 - 15775884
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  15775845 acaacaacaaccaagccttattccactaagtggggtcggc 15775884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 17670750 - 17670711
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  17670750 acaacaacaaccaagccttatcccactaagtggggtcggc 17670711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 18424377 - 18424412
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtgggg 59  Q
    |||||||||||||||||||||| |||||||||||||    
T  18424377 tacaacaacaaccaagtcttatcccactaagtgggg 18424412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 25834960 - 25834921
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  25834960 acaacaacaaccaagccttatcccactaagtggggtcggc 25834921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 28508960 - 28508921
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  28508960 acaacaacaaccaagccttatcccactaagtggggtcggc 28508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 30306314 - 30306275
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  30306314 acaacaacaaccaagccttatcccactaagtggggtcggc 30306275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 35643230 - 35643191
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  35643230 acaacaacaaccaagccttatcccactaagtggggtcggc 35643191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 37520728 - 37520689
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  37520728 acaacaacaaccaagccttatcccactaagtggggtcggc 37520689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 38328370 - 38328409
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  38328370 acaacaacaaccaagccttatcccactaagtggggtcggc 38328409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 38429691 - 38429652
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  38429691 acaacaacaaccaagccttatcccactaagtggggtcggc 38429652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 41763043 - 41763082
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  41763043 acaacaacaaccaagccttatcccactaagtggggtcggc 41763082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 43573130 - 43573169
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  43573130 acaacaacaaccaagccttatcccactaagtggggtcggc 43573169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 44437721 - 44437760
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  44437721 acaacaacaaccaagccttatcccactaagtggggtcggc 44437760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 3243654 - 3243692
Alignment:
Q  26 caacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  3243654 caacaacaaccaagccttatcccactaagtggggtcggc 3243692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 13474213 - 13474251
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcg 62  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  13474213 tacaacaacaaccaagtcttatcccactaagtggagtcg 13474251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 11992107 - 11992144
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtc 61  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  11992107 tacaacaacaaccaagccttattccactaagtggggtc 11992144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 12734982 - 12734945
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcg 62  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  12734982 acaacaacaaccaagccttatcccactaagtggggtcg 12734945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 39029867 - 39029830
Alignment:
Q  27 aacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  39029867 aacaacaaccaagccttatcccactaagtggggtcggc 39029830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 13727003 - 13726967
Alignment:
Q  28 acaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  13727003 acaacaaccaagttttattccactaagtggggtcggc 13726967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 16521006 - 16521046
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||| || ||||| ||||||||||||||||||    
T  16521006 tacaacaacaaccgagccttatcccactaagtggggtcggc 16521046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 17429333 - 17429293
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||| |||||  |||||||||||||||||    
T  17429333 tacaacaacaaccaagccttatctcactaagtggggtcggc 17429293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 20935483 - 20935447
Alignment:
Q  28 acaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||||  |||||||||||||||||    
T  20935483 acaacaaccaagtcttatcacactaagtggggtcggc 20935447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 40979926 - 40979967
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  40979926 atacaacaacaaccaagccttatcccactaagtggggtcggc 40979967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 27649075 - 27649023
Alignment:
Q  12 tggtctgaaatatacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||| ||| | ||||||||||||||| ||||| ||||||||||||||||||    
T  27649075 tggtctcaaaaaaacaacaacaaccaagccttatcccactaagtggggtcggc 27649023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 45840996 - 45841032
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||||||||||||||||| |||||||    
T  45840996 acaacaacaaccaagtcttataccactaattggggtc 45841032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 1011328 - 1011289
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  1011328 acaacaacaaccaagccttatcccactaagtggggtcggc 1011289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 2885722 - 2885761
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  2885722 acaacaacaaccaagccttatcccactaagtggggtcggc 2885761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 11594242 - 11594203
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  11594242 acaacaacaaccaagccttatcccactaagtggggtcggc 11594203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 12841275 - 12841314
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  12841275 acaacaacaaccaagccttatcccactaagtggggtcggc 12841314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 14594034 - 14593995
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  14594034 acaacaacaaccaagccttatcccactaagtggggtcggc 14593995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 16013557 - 16013518
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  16013557 acaacaacaaccaagccttatcccactaagtggggtcggc 16013518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 21244283 - 21244322
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  21244283 acaacaacaaccaagccttatcccactaagtggggtcggc 21244322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 28208328 - 28208367
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  28208328 acaacaacaaccaagccttatcccactaagtggggtcggc 28208367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 29650666 - 29650627
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  29650666 acaacaacaaccaagccttatcccactaagtggggtcggc 29650627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 31005487 - 31005448
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  31005487 acaacaacaaccaagccttatcccactaagtggggtcggc 31005448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 31682602 - 31682641
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  31682602 acaacaacaaccaagccttatcccactaagtggggtcggc 31682641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 31869102 - 31869141
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  31869102 acaacaacaaccaagccttatcccactaagtggggtcggc 31869141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 32631846 - 32631807
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  32631846 acaacaacaaccaagccttatcccactaagtggggtcggc 32631807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 37618227 - 37618188
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  37618227 acaacaacaaccaagccttatcccactaagtggggtcggc 37618188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 39906372 - 39906411
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  39906372 acaacaacaaccaagccttatcccactaagtggggtcggc 39906411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 41157941 - 41157898
Alignment:
Q  21 atatacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||    
T  41157941 atatacaacaacaatcaagccttatcccactaagtggggtcggc 41157898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 41483769 - 41483730
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  41483769 acaacaacaaccaaatcttatcccactaagtggggtcggc 41483730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 43491590 - 43491551
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  43491590 acaacaacaaccaagccttatcccactaagtggggtcggc 43491551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 44855174 - 44855213
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  44855174 acaacaacaaccaagccttatcccactaagtggggtcggc 44855213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 47652829 - 47652790
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  47652829 acaacaacaaccaagccttatcccactaagtggggtcggc 47652790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 48515557 - 48515518
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  48515557 acaacaaaaaccaagtcttatcccactaagtggggtcggc 48515518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 34746028 - 34745990
Alignment:
Q  26 caacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  34746028 caacaacaaccaagccttatcccactaagtggggtcggc 34745990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 38103616 - 38103654
Alignment:
Q  26 caacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  38103616 caacaacaaccaagtcttatcccactaactggggtcggc 38103654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 43423991 - 43424029
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcgg 63  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  43423991 acaacaacaaccaagccttatcccactaagtggggtcgg 43424029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 6263539 - 6263502
Alignment:
Q  27 aacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  6263539 aacaacaaccaagccttatcccactaagtggggtcggc 6263502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 33732118 - 33732081
Alignment:
Q  21 atatacaacaacaaccaagtcttataccactaagtggg 58  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  33732118 atatacaacaacaaccaagccttatcccactaagtggg 33732081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 35734689 - 35734730
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||| ||||| || |||||||||||||||    
T  35734689 atacaacaacaaccaagccttatcccgctaagtggggtcggc 35734730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 48735683 - 48735720
Alignment:
Q  27 aacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  48735683 aacaacaaccaagccttatgccactaagtggggtcggc 48735720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 6375147 - 6375111
Alignment:
Q  28 acaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  6375147 acaacaaccaagccttatcccactaagtggggtcggc 6375111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 6807773 - 6807737
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    |||||||||||||| |||||| |||||||||||||||    
T  6807773 acaacaacaaccaaatcttatcccactaagtggggtc 6807737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 25579102 - 25579142
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||| ||| ||||||||||| ||||||||||||    
T  25579102 tacaacaacaactaagccttataccactgagtggggtcggc 25579142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 28355448 - 28355412
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  28355448 acaacaacaaccaagccttatcccactaagtggggtc 28355412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 29012337 - 29012373
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  29012337 acaacaacaaccaagtcttatcccactaagtagggtc 29012373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 33650870 - 33650906
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  33650870 acaacaacaaccaagccttatcccactaagtggggtc 33650906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 36101777 - 36101813
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  36101777 acaacaacaaccaagccttatcccactaagtggggtc 36101813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 47413715 - 47413751
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  47413715 acaacaacaaccaagccttatcccactaagtggggtc 47413751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 9707054 - 9707013
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  9707054 atacaacaacaaccaagccttatcccactaagtggggtcggc 9707013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 34505 - 34541
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||||||||| |||||||||||||||    
T  34505 acaacaacaaccaagtcttatcccactaagtggggtc 34541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 34934829 - 34934869
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  34934829 tacaacaacaaccaagccttatcccactaagtggggtcggc 34934869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 3206459 - 3206498
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  3206459 acaacaataaccaagtcttatcccactaagtggggtcggc 3206498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 5258148 - 5258187
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  5258148 acaacaacaaccaagacttatcccactaagtggggtcggc 5258187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 12890857 - 12890818
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  12890857 acaacaacaaccaagccttatcccactaagtggggtcggc 12890818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 28085658 - 28085619
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  28085658 acaacaacaaccaagccttatcccactaagtggggtcggc 28085619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 33730247 - 33730208
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  33730247 acaacaacaaccaagccttatcccactaagtggggtcggc 33730208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 608442 - 608404
Alignment:
Q  26 caacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  608442 caacaacaaccaagtcttatcccactaagtagggtcggc 608404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 1615220 - 1615262
Alignment:
Q  22 tatacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||||||||||| ||||||| || |||||||    
T  1615220 tatacaacaacaaccaagtcttatcccactaaatgaggtcggc 1615262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 10098896 - 10098933
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcg 62  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  10098896 acaacaacaatcaagtcttatcccactaagtggggtcg 10098933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 28889 - 28928
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  28889 acaacaacaaccaagccttatcccactaagtggggtcggc 28928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 31750 - 31711
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  31750 acaacaacaaccaagccttatcccactaagtggggtcggc 31711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 3713 - 3680
Alignment:
Q  31 acaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||| ||||||||||||||||||    
T  3713 acaaccaagtcttatcccactaagtggggtcggc 3680  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 16862 - 16821
Alignment:
Q  23 atacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||    
T  16862 atacaacaacaaccaagccttatcccactaagtggagtcggc 16821  T

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Target: scaffold0157 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 25532 - 25568
Alignment:
Q  25 acaacaacaaccaagtcttataccactaagtggggtc 61  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  25532 acaacaacaaccaagccttatcccactaagtggggtc 25568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 83001 - 82961
Alignment:
Q  24 tacaacaacaaccaagtcttataccactaagtggggtcggc 64  Q
    |||||||||||||||| ||||| ||| ||||||||||||||    
T  83001 tacaacaacaaccaagccttattccattaagtggggtcggc 82961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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