View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0828_high_7 (Length: 209)
Name: NF0828_high_7
Description: NF0828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0828_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 1839872 - 1839912
Alignment:
| Q |
31 |
gtaggaacaacagttgcagctgattcagcaccaaataactg |
71 |
Q |
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| T |
1839872 |
gtaggaacaacagttgcagctgattcagcaccaaataactg |
1839912 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 1865816 - 1865854
Alignment:
| Q |
29 |
tggtaggaacaacagttgcagctgattcagcaccaaata |
67 |
Q |
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| T |
1865816 |
tggtaggaacaacagttgcagctgattcagcaacaaata |
1865854 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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