View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0829_high_26 (Length: 425)
Name: NF0829_high_26
Description: NF0829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0829_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 29 - 384
Target Start/End: Original strand, 44829116 - 44829471
Alignment:
| Q |
29 |
atatgagagtaacaaaatagcttgacaaagcaagacctaaaaggataaattatatctttttctctatatttttagggggaggtgtagttgtgttactttg |
128 |
Q |
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| T |
44829116 |
atatgagagtaacaaaatagcttgacaaatcaagacctaaaaggataaattatatctttttctctatatttttagggggaggtgtagttgtgttactttg |
44829215 |
T |
|
| Q |
129 |
atgtgtgatggataaatggtacagaggagtttgctatttatatgagtggttagtatatacatcggttattgatgatttcaatgttggataaataataaat |
228 |
Q |
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| T |
44829216 |
atgtgtgatggataaatggtacacaggagtttgctatttatatgagtggttagtatatacatcggttattgatgatttcaatgtttgataaataataaat |
44829315 |
T |
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| Q |
229 |
gtgaccaaagtctactagtattttaaagtttatggtaaatatatatatgatgtctctcttatagtca----attcatcaaggtattgataaatcgcttga |
324 |
Q |
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||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
44829316 |
gtgaccaaagtctactagtattttaaagtttatagtaa----atatatgatgtctctcttatagtcaattcattcatcaaggtattgataaatcgcttga |
44829411 |
T |
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| Q |
325 |
cacttacaatcaaagataagtttaacactagacacaatgtctattcaattatgtcatttt |
384 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44829412 |
cacttacaatcaaagataagtttaacactagacacaatgtctattcaattatgtcatttt |
44829471 |
T |
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