View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0829_low_100 (Length: 245)
Name: NF0829_low_100
Description: NF0829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0829_low_100 |
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Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 9145560 - 9145782
Alignment:
| Q |
1 |
ttcagcagtgctttgcattcaagctgtgcaagagaatattgaaccaaagagtctaggggacattactttagaagccccttgtaaggttcgatttggtgta |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
9145560 |
ttcagcagtgctttgcattcaagctgtgcaagagaatattgaaccaaagagtctaggggacattactttagaagccccttgtagggttcgatttggtgta |
9145659 |
T |
|
| Q |
101 |
atctccttgtttggtgaattttacattgcagtaataatgttggtcctttgatgtggttgctgcagtattatgtctcctcttgtagagcatgttgctcagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9145660 |
atctccttgtttggtgaattttacattgcactaataatgttggtcctttgatgtggttgctgcagtattatgtctcctcttgtagagcatgttgctcagt |
9145759 |
T |
|
| Q |
201 |
tgactagttcccaaaggctactt |
223 |
Q |
| |
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||||||||||||||||||||||| |
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|
| T |
9145760 |
tgactagttcccaaaggctactt |
9145782 |
T |
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