View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0829_low_33 (Length: 368)
Name: NF0829_low_33
Description: NF0829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0829_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 159 - 339
Target Start/End: Complemental strand, 31504560 - 31504380
Alignment:
| Q |
159 |
caattttttgataacccttttactccctgaaaactttgcaattcacattacctcaccaacctccttaaaaaaccatctttttgttccagaaatgtaaacc |
258 |
Q |
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| T |
31504560 |
caattttttgataacccttttactccctgaaaactttgcaattcacattacctcaccaacctcctaaaaaaaccatctttttgttccagaaatgtaaacc |
31504461 |
T |
|
| Q |
259 |
ataatgacagaaaagaatcccaaaaactagttctttaaggtaacaaggtacaataatgtaatccaaaacaaaccctgcaaa |
339 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31504460 |
ataatgacagaaaagaatcccaaaaactagttctttaaggtaacaaggtacaataatgtaatccaaaacaaaccctgcaaa |
31504380 |
T |
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