View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0829_low_94 (Length: 251)
Name: NF0829_low_94
Description: NF0829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0829_low_94 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 28985510 - 28985264
Alignment:
| Q |
1 |
ctataattgccatgtatgcaaaatgtggaagtttgaattatgctcgtgagttgtttgatgaaatgggtgagaaagatgaggtaagttataggtcgattat |
100 |
Q |
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| T |
28985510 |
ctataattgccatgtatgcaaaatgtggaagtttgaattatgctcgtgagttgtttgatgaaatgggtgagaaagatgaggtaagttataggtcgattat |
28985411 |
T |
|
| Q |
101 |
ttctgggtatatgattaatgggtttgtcgataaggctttagatgttttaaagggaatagaaaaccctggattgagtacttggaatgatgtgattcctggt |
200 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28985410 |
ttctgggtatatgattaatgggtttgtcgatgaggctttagatgttttaaagggaatagaaaaccctggattgagtacttggaatgatgtgattcctggt |
28985311 |
T |
|
| Q |
201 |
atggttcagaataaccagtttgaacgagctttggattttgttggaga |
247 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||| |||| |
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| T |
28985310 |
atggttcagaataaccagtttgaacgagctttggatttggttagaga |
28985264 |
T |
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