View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0830_high_35 (Length: 437)

Name: NF0830_high_35
Description: NF0830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0830_high_35
NF0830_high_35
[»] chr1 (50 HSPs)
chr1 (1-426)||(29056360-29056788)
chr1 (294-410)||(36371469-36371584)
chr1 (296-411)||(8904412-8904526)
chr1 (293-407)||(33700734-33700847)
chr1 (301-409)||(9165164-9165271)
chr1 (294-410)||(11063555-11063670)
chr1 (294-410)||(8177144-8177259)
chr1 (329-406)||(15786317-15786393)
chr1 (294-411)||(21547442-21547558)
chr1 (328-409)||(50901581-50901662)
chr1 (327-411)||(4566546-4566629)
chr1 (294-409)||(2799862-2799976)
chr1 (294-409)||(10526823-10526937)
chr1 (294-405)||(14787298-14787408)
chr1 (327-405)||(17745251-17745328)
chr1 (327-409)||(31794259-31794340)
chr1 (326-410)||(6122793-6122876)
chr1 (360-408)||(18459259-18459307)
chr1 (330-409)||(16169976-16170054)
chr1 (327-409)||(51703779-51703860)
chr1 (328-409)||(2219972-2220052)
chr1 (331-411)||(40257397-40257476)
chr1 (294-369)||(1247152-1247227)
chr1 (330-409)||(19528325-19528403)
chr1 (294-369)||(40810506-40810581)
chr1 (330-409)||(52116779-52116857)
chr1 (328-410)||(34228873-34228953)
chr1 (327-407)||(15904612-15904692)
chr1 (327-411)||(21267988-21268071)
chr1 (331-409)||(21694446-21694520)
chr1 (330-382)||(43445989-43446041)
chr1 (330-409)||(952511-952589)
chr1 (327-378)||(3265954-3266005)
chr1 (327-410)||(6650594-6650676)
chr1 (328-379)||(12370192-12370243)
chr1 (330-405)||(24047100-24047174)
chr1 (335-409)||(1690080-1690153)
chr1 (332-410)||(37046984-37047060)
chr1 (331-409)||(37400274-37400351)
chr1 (328-410)||(51814493-51814574)
chr1 (330-411)||(4824969-4825049)
chr1 (330-379)||(17297013-17297062)
chr1 (328-409)||(19940868-19940948)
chr1 (328-409)||(30420310-30420390)
chr1 (330-402)||(17410238-17410309)
chr1 (331-367)||(23398981-23399017)
chr1 (382-410)||(25297771-25297799)
chr1 (330-382)||(31605846-31605898)
chr1 (342-410)||(41508830-41508897)
chr1 (342-410)||(45235389-45235456)
[»] chr7 (51 HSPs)
chr7 (294-410)||(43215183-43215298)
chr7 (294-409)||(26459372-26459486)
chr7 (294-409)||(39631844-39631958)
chr7 (294-409)||(17113795-17113909)
chr7 (316-410)||(23552117-23552210)
chr7 (294-411)||(17040974-17041090)
chr7 (294-409)||(2962460-2962573)
chr7 (310-409)||(18363696-18363794)
chr7 (330-409)||(20335829-20335907)
chr7 (330-409)||(22760863-22760941)
chr7 (331-409)||(39499718-39499795)
chr7 (330-410)||(42711957-42712036)
chr7 (328-410)||(2446307-2446388)
chr7 (294-411)||(5672531-5672647)
chr7 (294-411)||(5697583-5697699)
chr7 (331-410)||(41487361-41487436)
chr7 (341-409)||(25021344-25021411)
chr7 (329-409)||(30442488-30442567)
chr7 (327-402)||(7721376-7721450)
chr7 (330-409)||(43590907-43590985)
chr7 (294-380)||(29785263-29785349)
chr7 (294-406)||(15905636-15905746)
chr7 (293-409)||(24513797-24513912)
chr7 (294-410)||(25655190-25655305)
chr7 (294-409)||(23301564-23301678)
chr7 (327-410)||(30579334-30579416)
chr7 (306-409)||(33869419-33869521)
chr7 (294-369)||(37162312-37162387)
chr7 (342-409)||(42836011-42836077)
chr7 (328-366)||(48959240-48959278)
chr7 (327-404)||(41519259-41519335)
chr7 (330-410)||(18056773-18056852)
chr7 (327-395)||(33222384-33222451)
chr7 (328-408)||(35513467-35513546)
chr7 (294-382)||(37085511-37085599)
chr7 (294-406)||(45976885-45976996)
chr7 (327-406)||(4566423-4566501)
chr7 (328-382)||(5668567-5668621)
chr7 (335-409)||(7801180-7801253)
chr7 (327-409)||(15137553-15137634)
chr7 (331-409)||(23735226-23735303)
chr7 (328-410)||(45709704-45709785)
chr7 (301-382)||(11700191-11700271)
chr7 (297-378)||(21569997-21570078)
chr7 (330-403)||(21877814-21877886)
chr7 (329-382)||(29385740-29385793)
chr7 (330-406)||(18884403-18884478)
chr7 (333-409)||(31835192-31835267)
chr7 (294-410)||(35119382-35119497)
chr7 (330-410)||(38374597-38374676)
chr7 (333-409)||(48771938-48772013)
[»] chr6 (28 HSPs)
chr6 (294-410)||(12188265-12188380)
chr6 (328-410)||(33549103-33549184)
chr6 (294-369)||(15951264-15951339)
chr6 (342-411)||(31623001-31623069)
chr6 (332-411)||(10338174-10338252)
chr6 (330-409)||(14557962-14558040)
chr6 (330-409)||(21418470-21418548)
chr6 (330-415)||(22669-22753)
chr6 (331-409)||(30127400-30127477)
chr6 (294-367)||(6608078-6608150)
chr6 (294-411)||(13330085-13330201)
chr6 (332-413)||(14199947-14200027)
chr6 (328-411)||(12234503-12234585)
chr6 (328-411)||(20744505-20744587)
chr6 (315-382)||(20863401-20863468)
chr6 (327-409)||(1056680-1056761)
chr6 (294-352)||(11306136-11306194)
chr6 (297-407)||(22995000-22995109)
chr6 (297-407)||(23793291-23793400)
chr6 (329-407)||(32613137-32613214)
chr6 (294-367)||(98744-98817)
chr6 (330-367)||(346571-346608)
chr6 (328-409)||(2616476-2616556)
chr6 (328-381)||(19162810-19162863)
chr6 (329-378)||(23910108-23910157)
chr6 (329-409)||(19638001-19638080)
chr6 (333-409)||(22995112-22995187)
chr6 (333-409)||(23793213-23793288)
[»] chr8 (43 HSPs)
chr8 (294-409)||(18540298-18540412)
chr8 (330-413)||(19703485-19703567)
chr8 (330-411)||(16852338-16852418)
chr8 (328-407)||(3624582-3624660)
chr8 (330-410)||(28783059-28783138)
chr8 (326-410)||(44780108-44780191)
chr8 (328-409)||(968362-968442)
chr8 (342-407)||(2203494-2203558)
chr8 (331-411)||(18897164-18897243)
chr8 (294-409)||(6436517-6436631)
chr8 (326-409)||(11819776-11819858)
chr8 (294-409)||(33017214-33017327)
chr8 (327-409)||(23361644-23361725)
chr8 (327-409)||(30483879-30483960)
chr8 (328-382)||(34628668-34628722)
chr8 (294-407)||(8794308-8794419)
chr8 (310-410)||(12988427-12988526)
chr8 (294-366)||(31408084-31408156)
chr8 (328-412)||(35641897-35641980)
chr8 (294-409)||(6569733-6569847)
chr8 (326-409)||(27750730-27750812)
chr8 (294-381)||(27871695-27871782)
chr8 (329-411)||(3058046-3058127)
chr8 (342-412)||(5264541-5264610)
chr8 (328-410)||(8484998-8485079)
chr8 (294-391)||(6536538-6536634)
chr8 (330-415)||(36205189-36205273)
chr8 (327-411)||(13129666-13129749)
chr8 (294-409)||(20994419-20994534)
chr8 (337-409)||(26688865-26688936)
chr8 (329-409)||(29431011-29431090)
chr8 (332-408)||(29858049-29858124)
chr8 (331-410)||(11793520-11793598)
chr8 (327-398)||(35690059-35690129)
chr8 (337-410)||(4830486-4830558)
chr8 (336-409)||(23874386-23874458)
chr8 (329-410)||(28566104-28566183)
chr8 (329-410)||(28573727-28573806)
chr8 (328-409)||(35287716-35287796)
chr8 (326-363)||(43594312-43594349)
chr8 (333-374)||(45053493-45053533)
chr8 (301-409)||(11518846-11518953)
chr8 (330-382)||(30113039-30113091)
[»] chr4 (49 HSPs)
chr4 (294-406)||(7292760-7292871)
chr4 (301-409)||(37109320-37109427)
chr4 (294-409)||(31759620-31759734)
chr4 (327-409)||(37274454-37274536)
chr4 (294-382)||(23377982-23378070)
chr4 (294-409)||(15180741-15180852)
chr4 (294-402)||(44194946-44195053)
chr4 (327-409)||(2622390-2622475)
chr4 (327-410)||(7949449-7949531)
chr4 (294-411)||(2184994-2185111)
chr4 (294-392)||(38869785-38869882)
chr4 (294-411)||(19680750-19680866)
chr4 (325-405)||(13901746-13901825)
chr4 (294-409)||(4249177-4249291)
chr4 (326-409)||(8030198-8030280)
chr4 (330-409)||(19238575-19238653)
chr4 (330-409)||(46295097-46295175)
chr4 (294-364)||(20770955-20771025)
chr4 (328-402)||(49576890-49576963)
chr4 (328-392)||(13015444-13015507)
chr4 (330-410)||(37720212-37720291)
chr4 (330-409)||(20608922-20609000)
chr4 (330-409)||(39509070-39509148)
chr4 (330-409)||(55427198-55427276)
chr4 (331-409)||(13496241-13496318)
chr4 (294-356)||(24991579-24991641)
chr4 (316-410)||(29195094-29195186)
chr4 (327-409)||(46545711-46545792)
chr4 (332-410)||(51250522-51250599)
chr4 (301-366)||(20216153-20216217)
chr4 (332-409)||(31826609-31826685)
chr4 (349-406)||(33438495-33438551)
chr4 (294-378)||(11592115-11592199)
chr4 (330-382)||(32992638-32992690)
chr4 (294-382)||(33632098-33632186)
chr4 (294-409)||(1730451-1730565)
chr4 (328-382)||(24234671-24234725)
chr4 (360-410)||(27965538-27965587)
chr4 (294-391)||(16581711-16581807)
chr4 (329-378)||(19583150-19583199)
chr4 (326-411)||(21660138-21660222)
chr4 (326-411)||(21668902-21668986)
chr4 (331-380)||(46329192-46329241)
chr4 (329-405)||(4911229-4911304)
chr4 (327-411)||(11418218-11418301)
chr4 (336-412)||(24827822-24827897)
chr4 (327-409)||(37443702-37443780)
chr4 (331-407)||(40283985-40284060)
chr4 (330-409)||(55256197-55256275)
[»] chr5 (39 HSPs)
chr5 (305-410)||(26078024-26078128)
chr5 (307-410)||(34984805-34984907)
chr5 (330-411)||(30883196-30883276)
chr5 (327-409)||(25627057-25627138)
chr5 (306-410)||(14285160-14285263)
chr5 (294-410)||(22737081-22737196)
chr5 (310-409)||(21549115-21549213)
chr5 (294-358)||(16638865-16638929)
chr5 (294-409)||(7918431-7918545)
chr5 (327-406)||(12877696-12877774)
chr5 (294-409)||(16773807-16773921)
chr5 (333-411)||(16436616-16436692)
chr5 (327-409)||(29075781-29075862)
chr5 (330-409)||(16457810-16457888)
chr5 (301-407)||(18595970-18596075)
chr5 (294-383)||(2331950-2332038)
chr5 (294-382)||(25979196-25979284)
chr5 (326-409)||(17028258-17028340)
chr5 (310-409)||(19043458-19043556)
chr5 (327-409)||(21589288-21589369)
chr5 (329-402)||(1410657-1410728)
chr5 (328-409)||(8278271-8278351)
chr5 (294-379)||(39327053-39327137)
chr5 (330-381)||(84851-84902)
chr5 (332-411)||(87423-87501)
chr5 (294-361)||(2269186-2269253)
chr5 (332-411)||(30109308-30109386)
chr5 (327-402)||(41730549-41730623)
chr5 (328-366)||(11352025-11352063)
chr5 (328-410)||(29692382-29692463)
chr5 (294-356)||(30000168-30000230)
chr5 (327-369)||(43442235-43442277)
chr5 (328-409)||(14495801-14495881)
chr5 (294-402)||(17155831-17155936)
chr5 (327-380)||(31074260-31074313)
chr5 (325-410)||(36958115-36958199)
chr5 (294-367)||(37258328-37258401)
chr5 (337-409)||(892479-892550)
chr5 (342-410)||(40461623-40461690)
[»] chr2 (50 HSPs)
chr2 (294-411)||(19322766-19322882)
chr2 (329-409)||(42327392-42327471)
chr2 (330-411)||(29503269-29503349)
chr2 (294-409)||(42922414-42922529)
chr2 (294-409)||(13803495-13803609)
chr2 (330-409)||(23052521-23052599)
chr2 (327-409)||(11062360-11062441)
chr2 (294-411)||(4060176-4060292)
chr2 (301-409)||(19244109-19244216)
chr2 (330-410)||(37480074-37480153)
chr2 (328-411)||(23140908-23140990)
chr2 (328-411)||(23552698-23552780)
chr2 (328-411)||(42602552-42602634)
chr2 (294-355)||(2750588-2750649)
chr2 (294-391)||(30410511-30410607)
chr2 (294-411)||(34041550-34041666)
chr2 (327-411)||(1729814-1729897)
chr2 (330-410)||(21213768-21213847)
chr2 (301-409)||(40416359-40416466)
chr2 (294-409)||(4438941-4439055)
chr2 (327-410)||(11251086-11251168)
chr2 (295-410)||(45026742-45026856)
chr2 (327-409)||(1435064-1435144)
chr2 (332-409)||(12994376-12994452)
chr2 (327-408)||(16918573-16918653)
chr2 (326-410)||(21195670-21195753)
chr2 (327-411)||(33569853-33569937)
chr2 (330-410)||(39714991-39715070)
chr2 (310-409)||(5147657-5147755)
chr2 (330-409)||(19016031-19016109)
chr2 (328-382)||(4262298-4262352)
chr2 (328-410)||(7799031-7799112)
chr2 (333-411)||(17737625-17737701)
chr2 (294-408)||(37755933-37756046)
chr2 (330-411)||(12517751-12517835)
chr2 (329-414)||(30808644-30808728)
chr2 (294-410)||(14500276-14500391)
chr2 (333-409)||(28846691-28846766)
chr2 (294-365)||(1156476-1156546)
chr2 (326-365)||(6658425-6658464)
chr2 (331-410)||(29197375-29197453)
chr2 (331-406)||(32687484-32687558)
chr2 (330-412)||(3697398-3697478)
chr2 (331-377)||(33839259-33839305)
chr2 (332-410)||(43963989-43964065)
chr2 (294-367)||(2285264-2285336)
chr2 (329-410)||(25931005-25931085)
chr2 (330-382)||(30359680-30359731)
chr2 (330-382)||(31681075-31681127)
chr2 (330-410)||(45672376-45672455)
[»] chr3 (47 HSPs)
chr3 (294-410)||(46518627-46518742)
chr3 (294-409)||(10445101-10445216)
chr3 (294-411)||(30311304-30311420)
chr3 (326-411)||(36720379-36720463)
chr3 (301-406)||(53412948-53413052)
chr3 (327-410)||(27093356-27093438)
chr3 (294-409)||(37788428-37788541)
chr3 (294-410)||(15048023-15048138)
chr3 (294-409)||(28703366-28703480)
chr3 (327-409)||(16354887-16354968)
chr3 (332-413)||(8051210-8051290)
chr3 (328-409)||(14186648-14186727)
chr3 (294-409)||(37051256-37051370)
chr3 (327-409)||(4222141-4222222)
chr3 (326-411)||(32651432-32651515)
chr3 (294-367)||(33464504-33464576)
chr3 (297-397)||(37504341-37504440)
chr3 (327-409)||(8796088-8796168)
chr3 (294-409)||(26505323-26505437)
chr3 (330-408)||(47454615-47454692)
chr3 (332-409)||(27923043-27923119)
chr3 (328-409)||(47810740-47810820)
chr3 (326-402)||(8075121-8075196)
chr3 (333-409)||(8170672-8170747)
chr3 (330-382)||(16900679-16900731)
chr3 (306-382)||(27259187-27259263)
chr3 (330-409)||(14339610-14339688)
chr3 (294-381)||(44743817-44743904)
chr3 (328-402)||(4844507-4844580)
chr3 (328-402)||(4870203-4870276)
chr3 (328-410)||(10499105-10499186)
chr3 (328-410)||(31520601-31520682)
chr3 (307-409)||(40063619-40063720)
chr3 (330-407)||(10682942-10683017)
chr3 (329-410)||(19154630-19154710)
chr3 (328-409)||(21960551-21960631)
chr3 (382-411)||(34622571-34622600)
chr3 (327-372)||(36010778-36010823)
chr3 (333-410)||(49397542-49397618)
chr3 (329-409)||(2597217-2597296)
chr3 (326-402)||(2667869-2667944)
chr3 (337-409)||(3054994-3055065)
chr3 (313-369)||(3427534-3427590)
chr3 (333-401)||(12761520-12761587)
chr3 (326-409)||(40777014-40777094)
chr3 (330-382)||(47236969-47237021)
chr3 (330-382)||(54990728-54990780)
[»] scaffold0258 (1 HSPs)
scaffold0258 (328-409)||(15319-15399)
[»] scaffold0002 (1 HSPs)
scaffold0002 (327-406)||(94966-95044)
[»] scaffold0072 (1 HSPs)
scaffold0072 (294-367)||(16592-16664)
[»] scaffold0178 (1 HSPs)
scaffold0178 (329-409)||(6631-6710)
[»] scaffold0211 (1 HSPs)
scaffold0211 (294-409)||(24053-24167)
[»] scaffold0180 (1 HSPs)
scaffold0180 (327-398)||(19957-20027)
[»] scaffold0004 (1 HSPs)
scaffold0004 (294-405)||(81526-81636)
[»] scaffold0101 (1 HSPs)
scaffold0101 (332-382)||(43332-43382)
[»] scaffold0299 (1 HSPs)
scaffold0299 (327-403)||(11534-11609)
[»] scaffold0126 (1 HSPs)
scaffold0126 (327-399)||(25342-25413)
[»] scaffold0122 (1 HSPs)
scaffold0122 (334-402)||(6921-6988)
[»] scaffold0291 (1 HSPs)
scaffold0291 (330-409)||(2468-2546)
[»] scaffold0074 (1 HSPs)
scaffold0074 (327-378)||(45754-45805)
[»] scaffold0517 (1 HSPs)
scaffold0517 (331-409)||(7725-7802)
[»] scaffold0194 (1 HSPs)
scaffold0194 (328-382)||(13042-13096)
[»] scaffold0118 (1 HSPs)
scaffold0118 (327-409)||(41628-41709)


Alignment Details
Target: chr1 (Bit Score: 287; Significance: 1e-161; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 1 - 426
Target Start/End: Complemental strand, 29056788 - 29056360
Alignment:
Q  1 ccttcaaaaggttattacttttcataactggctctcatgatggccagaggatgcattgaagtttttgtgatttcggataattgaacaatggtaccaccta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  29056788 ccttcaaaaggttattacttttcataactggctctcatgatggccagaggatgcattgaagtttt-gtaatttcggataattgaacaatggtaccaccta 29056690  T
Q  101 tctctgctgtaaagaaaaggatgtaaagggaacaaaaggcttgtactaatttcaaaaatgtacgacgtacatatgcttccatgctagtgctcttaaaaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29056689 tctctgctgtaaagaaaaggatgtaaagggaacaaaaggcttgtactaatttcaaaaatgtacgacgtacatatgcttccatgctagtgctcttaaaaat 29056590  T
Q  201 caatactactatcattccaaatcttaatgtacat---cttcttcccaccttgaattatgaaacaagttcaattggagtagggta-nnnnnnnnnnnaaag 296  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||| ||||||||||            ||||    
T  29056589 caatactactatcattccaaatcttaatgtacatatgcttcttcccaccttgaattatgaaacaagttcaattagagtagggtattttttttttttaaag 29056490  T
Q  297 aagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagacca 396  Q
    |||||||||||||||  | |||||||  | ||||| |||||||| ||| | ||| ||||  | |||||||||| ||||||| |||||||||||| |||||    
T  29056489 aagttaaattaacccttttaaattggcatcagagataatcgaacctgaaaacttcaggatgagcacactcccaggtcccaaaccaaataccactggacca 29056390  T
Q  397 acccaagtgggtttagagtagggtatatta 426  Q
    ||||||||||||||||| ||||||||||||    
T  29056389 acccaagtgggtttagaatagggtatatta 29056360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 294 - 410
Target Start/End: Complemental strand, 36371584 - 36371469
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||||||||||||||  | |||||||||||||| | ||||||||||||| | |||||||||| || ||||||| |||||||||||     
T  36371584 aagaagctaaactaaccccctcaaattggcatcagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagcc-aataccactagg 36371486  T
Q  394 ccaacccaagtgggttt 410  Q
    |||||||||||||||||    
T  36371485 ccaacccaagtgggttt 36371469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 296 - 411
Target Start/End: Complemental strand, 8904526 - 8904412
Alignment:
Q  296 gaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagacc 395  Q
    ||||||||| |||||||||||||||||    |||||||||||||| ||||||||||||||| | ||||||| ||| ||||||| | ||||| ||||| ||    
T  8904526 gaagttaaactaaccccctcaaattggcaccagagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtc-aatactactaggcc 8904428  T
Q  396 aacccaagtgggttta 411  Q
    ||||||||||||||||    
T  8904427 aacccaagtgggttta 8904412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 293 - 407
Target Start/End: Original strand, 33700734 - 33700847
Alignment:
Q  293 aaagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactag 392  Q
    |||||||||||| ||||||||| |||||||    |||||||||||||| ||||||||||||||| | ||||||||||  | ||||||| |||||||||||    
T  33700734 aaagaagttaaactaacccccttaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagcc-aataccactag 33700832  T
Q  393 accaacccaagtggg 407  Q
     ||||||||||||||    
T  33700833 gccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 301 - 409
Target Start/End: Original strand, 9165164 - 9165271
Alignment:
Q  301 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccc 400  Q
    |||| |||||||||||||||||    ||||||||| |||| |||||| |||||||| | |||||||||| |||||||||| ||||||||||| |||||||    
T  9165164 taaagtaaccccctcaaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagcc-aataccactaggccaaccc 9165262  T
Q  401 aagtgggtt 409  Q
    |||||||||    
T  9165263 aagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 410
Target Start/End: Complemental strand, 11063670 - 11063555
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| ||||||| |||||||||   ||||||||||||||| | ||||||||||||| ||||||||  || |||||||||| ||||||||||||    
T  11063670 aagaagctaaactaaccccttcaaattggcactagagagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagcc-aataccactaga 11063572  T
Q  394 ccaacccaagtgggttt 410  Q
     |||||||| |||||||    
T  11063571 tcaacccaaatgggttt 11063555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 294 - 410
Target Start/End: Original strand, 8177144 - 8177259
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||||||||||||||    |||||||||||||| ||| ||||||||||| | ||||||||||  ||||||||| |||||||||||     
T  8177144 aagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagcc-aataccactagg 8177242  T
Q  394 ccaacccaagtgggttt 410  Q
    ||||| ||| |||||||    
T  8177243 ccaactcaaatgggttt 8177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 329 - 406
Target Start/End: Original strand, 15786317 - 15786393
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgg 406  Q
    |||||||||||| ||||||||||||||| | ||||||||||  ||||||||| ||||| |||||||||||||||||||    
T  15786317 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcc-aatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 411
Target Start/End: Original strand, 21547442 - 21547558
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    ||||||||||| || ||| |  |||||||  | |||||||||||||| ||| |||| |||||| | ||| ||||||||||||||||| |||||||||||     
T  21547442 aagaagttaaactagcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagcc-aataccactagg 21547540  T
Q  394 ccaacccaagtgggttta 411  Q
    ||||||||||| ||||||    
T  21547541 ccaacccaagtcggttta 21547558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 50901662 - 50901581
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||||  |||||||| |||||| | |||||| ||| |||||||||||| ||||||||| ||||||||||||||||    
T  50901662 gagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaattaccactaggccaacccaagtgggtt 50901581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 4566629 - 4566546
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||||||||||||| ||||||| ||||||| | |||||||||| || ||||||| |||| |||||| ||||||||||||||||||    
T  4566629 agagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagcc-aatatcactaggccaacccaagtgggttta 4566546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 2799976 - 2799862
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||||||||||||||    |||||||||||||| ||||||||||||||| | ||||||||||  || ||||||  ||||||||||     
T  2799976 aagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcc-tataccactagg 2799878  T
Q  394 ccaacccaagtgggtt 409  Q
    |||| | |||||||||    
T  2799877 ccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 10526937 - 10526823
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| ||||||||||| | |||||||     |||||||||||||  ||||||||||||||| | || ||||||| |||||||||| ||||||||| ||    
T  10526937 aagaagctaaattaacccacccaaattgactccagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagcc-aataccactgga 10526839  T
Q  394 ccaacccaagtgggtt 409  Q
    ||||||||| ||||||    
T  10526838 ccaacccaaatgggtt 10526823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 294 - 405
Target Start/End: Original strand, 14787298 - 14787408
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||| || |||||| | |||||||||||||||| ||| ||||||||||||||||||||| || ||| |||| | |||||||||||     
T  14787298 aagaagctaaactaacccacttaaattgatattagagagaatcgaacctgacaccttgaggagaaacacactctcaggtctcaagtc-aataccactagg 14787396  T
Q  394 ccaacccaagtg 405  Q
     |||| ||||||    
T  14787397 tcaactcaagtg 14787408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 405
Target Start/End: Original strand, 17745251 - 17745328
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 405  Q
    ||||||||||||||||||||||| |||||| | ||||| | || |||||||||| ||||||||||| ||||||||||||    
T  17745251 agagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagcc-aataccactaggccaacccaagtg 17745328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 31794259 - 31794340
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||| |||||||||   ||||||||||||| | |||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  31794259 agagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagcc-aataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 410
Target Start/End: Complemental strand, 6122876 - 6122793
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||| ||||||||| ||||||||||||||| | |||||||||| ||||||||||  ||||||||||  |||||||| |||||||    
T  6122876 tagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcc-tataccactagggcaacccaaatgggttt 6122793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 18459259 - 18459307
Alignment:
Q  360 cacactcccatgtcccaagccaaataccactagaccaacccaagtgggt 408  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||    
T  18459259 cacactcccaagtcccaagccaattaccactagaccaacccaagtgggt 18459307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 409
Target Start/End: Original strand, 16169976 - 16170054
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| ||| ||||||||||| |||||||||||| |||||||| | |||||||| || | ||||||||||||||    
T  16169976 gagaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtc-aataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 51703860 - 51703779
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||||| ||| || |||||||| | ||||||||||  | ||||||||| ||||||||||||||||||| ||||||    
T  51703860 agagagaatcgaacctgaaactttgaggaggagcacactcccagattccaagccaa-taccactagaccaacccaaatgggtt 51703779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 2220052 - 2219972
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||||| |||||||| |||||||| ||||||  || || ||||||| |||||||| ||| |||||||||||||||    
T  2220052 gagagaatcgaacctgagacctcgaggagaagcacactttcaggttccaagcc-aataccaccagaacaacccaagtgggtt 2219972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 40257476 - 40257397
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    ||||| |||| |||||||| |||||| | |||||||||| ||| |||||||| |||||| || ||||||||||||||||||    
T  40257476 agaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaa-taccaccaggccaacccaagtgggttta 40257397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 1247227 - 1247152
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactccca 369  Q
    |||||| |||| ||||||| ||||||||||   |||||||||||||| ||||||||||||||| |  |||||||||    
T  1247227 aagaagctaaaataaccccttcaaattggtaccagagagaatcgaacctgagaccttgaggaggagtacactccca 1247152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 409
Target Start/End: Original strand, 19528325 - 19528403
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| ||||||||||||||| | |||||||  |  ||||||||| |||||||| || ||||||||||||||||    
T  19528325 gagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagcc-aataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 40810581 - 40810506
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactccca 369  Q
    |||||| |||| |||||| ||||||||||    |||||||||||||| ||||||||||| ||| ||||||||||||    
T  40810581 aagaagctaaactaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaagaggaacacactccca 40810506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 409
Target Start/End: Original strand, 52116779 - 52116857
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||| |||| |||||| |||||||| | |||||||||| |||||||||| |||||||| || ||||||||| ||||||    
T  52116779 gagaattgaacctgagacattgaggaggagcacactcccaagtcccaagcc-aataccaccaggccaacccaactgggtt 52116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 34228953 - 34228873
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||| ||| |||||||||||| || |||||||||| | ||||||||||||  ||||| |||||||| |||||||||||    
T  34228953 gagagaatccaacctgagaccttgag-aggaacacactccgaggtcccaagccaac-accaccagaccaactcaagtgggttt 34228873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 15904692 - 15904612
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtggg 407  Q
    |||||||||||||  |||||  |||||||| |  | ||||||| |||| ||||||| |||||||||||||||| |||||||    
T  15904692 agagagaatcgaatctgagattttgaggaggaggatactcccaggtcctaagccaattaccactagaccaacctaagtggg 15904612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 411
Target Start/End: Original strand, 21267988 - 21268071
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||||||||| |||   |||||| |||||| | |||||||||| |||||||||| ||||| ||||| ||||| ||||||||||||    
T  21267988 agagagaatcaaacccaagacctagaggaggagcacactcccaagtcccaagcc-aatactactagcccaactcaagtgggttta 21268071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 409
Target Start/End: Complemental strand, 21694520 - 21694446
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||| |||||||||||||||   |||||||||| ||| |||||| |||||||| ||  |||||||||||||||    
T  21694520 agaatcgaacctgagaccttgaggag---cacactcccaagtctcaagcc-aataccaccaggtcaacccaagtgggtt 21694446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 43446041 - 43445989
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||||||||||||||||||||| | |||||||| | | ||||||||||    
T  43446041 gagaatcgaacatgagaccttgaggaggagcacactccaaggacccaagccaa 43445989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 409
Target Start/End: Complemental strand, 952589 - 952511
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||| ||| |||||| |||||||  | |||||||||| |||||||||| || ||||| |||||||| ||||||||||    
T  952589 gagaatctaacctgagactttgaggatgagcacactcccaggtcccaagcc-aacaccaccagaccaactcaagtgggtt 952511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 378
Target Start/End: Complemental strand, 3266005 - 3265954
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaag 378  Q
    |||||||||||||| ||||||||||||||| | |||||||||| || |||||    
T  3266005 agagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaag 3265954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 6650676 - 6650594
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    |||||||||||||| |||||| |||||||| | || ||||||   ||||||||| ||||||||||| |||||| || |||||||    
T  6650676 agagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagcc-aataccactaggccaacctaattgggttt 6650594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 12370243 - 12370192
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagc 379  Q
    ||||||||| |||||||||||| |||||| | |||||||||| |||||||||    
T  12370243 gagagaatcaaacatgagacctcgaggaggagcacactcccaggtcccaagc 12370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 405
Target Start/End: Original strand, 24047100 - 24047174
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 405  Q
    ||||||||||| ||| |||| |||||| | |||||||||| ||| |||||| |||||||  |||||||||||||||    
T  24047100 gagaatcgaacttgaaacctcgaggaggagcacactcccaagtctcaagcc-aataccatgagaccaacccaagtg 24047174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 409
Target Start/End: Original strand, 1690080 - 1690153
Alignment:
Q  335 tcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||| ||||||||  ||||| |||| ||||||| |||||||||| |||||||| |||||||  ||||||||||    
T  1690080 tcgaacttgagacctcaaggaggaacagactcccaggtcccaagcc-aataccaccagaccaattcaagtgggtt 1690153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 410
Target Start/End: Complemental strand, 37047060 - 37046984
Alignment:
Q  332 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||| ||| |||||||||||| || | |||||||| | ||||||||||||  ||||| ||||||||||||||||||||    
T  37047060 gaatcaaacctgagaccttgag-aggagcacactccaaggtcccaagccaac-accaccagaccaacccaagtgggttt 37046984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 409
Target Start/End: Complemental strand, 37400351 - 37400274
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||| ||||||||| ||||| | ||||||  || ||| |||||||| |||||| |||||||||||||| ||||    
T  37400351 agaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaa-taccaccagaccaacccaagttggtt 37400274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 51814574 - 51814493
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||||| ||||||||||||||| | ||||||| ||  || |||| | |||||||  || |||||||||||||||||    
T  51814574 gagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtc-aataccatcaggccaacccaagtgggttt 51814493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 411
Target Start/End: Complemental strand, 4825049 - 4824969
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    ||||||| ||| ||||||||||| ||| | |||||||| | |||||||||| || ||||  ||||||||||||||| |||||    
T  4825049 gagaatcaaacctgagaccttgaagaggagcacactccaaggtcccaagcc-aacaccatcagaccaacccaagtgtgttta 4824969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 17297062 - 17297013
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagc 379  Q
    ||||||| ||||||||||||||||||| | |||||||| | |||||||||    
T  17297062 gagaatcaaacatgagaccttgaggaggagcacactccaaggtcccaagc 17297013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 409
Target Start/End: Original strand, 19940868 - 19940948
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||| ||| ||||||||| ||||| | |||||||| | | ||||||| ||  ||||| |||||||||||||||||||    
T  19940868 gagagaatcaaacctgagaccttaaggaggagcacactccaaggacccaagctaac-accaccagaccaacccaagtgggtt 19940948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 30420390 - 30420310
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||| |||||| |||||  |||||||| | |||||||| || |||||||||||| |||||| | |||||| |||||||||    
T  30420390 gagagattcgaacctgagatgttgaggaggagcacactcctatatcccaagccaaa-accacttggccaacctaagtgggtt 30420310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 17410309 - 17410238
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 402  Q
    ||||||||||| ||||| || |||||| | ||||||||||  |||||| || ||||||||||| |||||||||    
T  17410309 gagaatcgaacttgagatctcgaggaggaccacactcccagatcccaaacc-aataccactaggccaacccaa 17410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 367
Target Start/End: Complemental strand, 23399017 - 23398981
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcc 367  Q
    |||||||||| |||||||||||| |||||||||||||    
T  23399017 agaatcgaacttgagaccttgagaagaaacacactcc 23398981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 410
Target Start/End: Complemental strand, 25297799 - 25297771
Alignment:
Q  382 aataccactagaccaacccaagtgggttt 410  Q
    |||||||||||||||||||||||||||||    
T  25297799 aataccactagaccaacccaagtgggttt 25297771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 31605846 - 31605898
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||||| ||||||||||||||| | |||||| | | ||||||||||||    
T  31605846 gagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagccaa 31605898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 41508897 - 41508830
Alignment:
Q  342 tgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||||||| | ||||||||||  |||||| || | |||||| || |||||||||||||||||    
T  41508897 tgagaccttgaggaggagcacactcccagatcccaaacc-agtaccaccaggccaacccaagtgggttt 41508830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 45235389 - 45235456
Alignment:
Q  342 tgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||| || |||||| | |||||||||| ||||||| |||| |||||  ||||||||||||||||||||    
T  45235389 tgagatctcgaggaggagcacactcccaagtcccaaaccaa-taccatcagaccaacccaagtgggttt 45235456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 8e-31; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 294 - 410
Target Start/End: Complemental strand, 43215298 - 43215183
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||||||||||||||  | |||||||||||||| ||||||||||||||| | |||||||| | |||||||||| ||||||||||||    
T  43215298 aagaagctaaactaaccccctcaaattggcataagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagcc-aataccactaga 43215200  T
Q  394 ccaacccaagtgggttt 410  Q
    |||||||||||||||||    
T  43215199 ccaacccaagtgggttt 43215183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 26459372 - 26459486
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| ||||||| |||||||||    |||||||||||||| ||||||||||||||| | |||||||||| |||||||||| |||||||||||     
T  26459372 aagaagctaaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagcc-aataccactagg 26459470  T
Q  394 ccaacccaagtgggtt 409  Q
    ||||||||||||||||    
T  26459471 ccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 39631958 - 39631844
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||||||||||||||    |||||||||||||| ||||||||||||||| | |  ||||||| |||||||||| |||||||||||     
T  39631958 aagaagctaaactaaccccctcaaattggcacaagagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagcc-aataccactagg 39631860  T
Q  394 ccaacccaagtgggtt 409  Q
    ||||||||||||||||    
T  39631859 ccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 17113909 - 17113795
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| ||||||||||||||| |  | |||||||||||||| ||||||||||||||||| |||||||||| || | ||||| ||||| |||||     
T  17113909 aagaagctaaactaaccccctcaaattagcatcagagagaatcgaacttgagaccttgaggagaagcacactcccaggttctaagcc-aatacaactagg 17113811  T
Q  394 ccaacccaagtgggtt 409  Q
    ||| ||||||||||||    
T  17113810 ccaccccaagtgggtt 17113795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 316 - 410
Target Start/End: Complemental strand, 23552210 - 23552117
Alignment:
Q  316 aaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    |||||||  |||||||||||||||| ||||||||||||||| | |||||||||| |||||||| | |||| |||||| |||||||||||||||||    
T  23552210 aaattggcattagagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtc-aatagcactaggccaacccaagtgggttt 23552117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 411
Target Start/End: Original strand, 17040974 - 17041090
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||||| |||| | ||||||||   | ||||||||||||| ||||||||||||||| | |||||| |||  ||||||||| ||| ||||||||    
T  17040974 aagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagcc-aatgccactaga 17041072  T
Q  394 ccaacccaagtgggttta 411  Q
    ||||||||||||||||||    
T  17041073 ccaacccaagtgggttta 17041090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 2962573 - 2962460
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    ||||||||||| |||| |||||||||||||   |||||||||||||| ||||| ||||||||| | ||||||| || || |||| || ||||||||||||    
T  2962573 aagaagttaaactaactccctcaaattggttccagagagaatcgaacctgagatcttgaggaggagcacactcacaggttccaaacc-aataccactaga 2962475  T
Q  394 ccaacccaagtgggtt 409  Q
    |||| |||||||||||    
T  2962474 ccaa-ccaagtgggtt 2962460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 409
Target Start/End: Complemental strand, 18363794 - 18363696
Alignment:
Q  310 cccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||||||  ||||||||||| ||| ||||||||||||||| | ||||||||||  || ||||||  |||||||||| ||||||||||||||||    
T  18363794 cccctcaaattggtactagagagaatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcc-tataccactaggccaacccaagtgggtt 18363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 409
Target Start/End: Original strand, 20335829 - 20335907
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| |||||||| |||||| | |||||||||| |||||||||| |||||| |||||||||||||||||||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagcc-aatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 409
Target Start/End: Complemental strand, 22760941 - 22760863
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| ||||||||||||||| | |||||||||| |||||||| | |||||||| |||||||||||||||||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtc-aataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 409
Target Start/End: Original strand, 39499718 - 39499795
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||||||||||| | ||| ||||||||| || |||||||||| ||||||||||| ||||||||||||||||    
T  39499718 agaatcgaacatgagaccttaaagaggaacacactcacaggtcccaagcc-aataccactaggccaacccaagtgggtt 39499795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 410
Target Start/End: Complemental strand, 42712036 - 42711957
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||||| | ||||||||||  |||||||||||| ||||    
T  42712036 gagaatcgaacatgagaccttgaggaggagcacactcccatgtaccaag-ctaataccactaagccaacccaagtgagttt 42711957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 2446388 - 2446307
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||||| ||||| || |||||| | |||||||||| |||||||||| |||||||  ||||||||||||||||||||    
T  2446388 gagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagcc-aataccatcagaccaacccaagtgggttt 2446307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 411
Target Start/End: Original strand, 5672531 - 5672647
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||||||||  |||||||||||||||    || |||||||||||| ||||||||||||||  |||||||| ||| || ||||   |||||| ||||||    
T  5672531 aagaagttaaaccaaccccctcaaattgagactaaagagaatcgaacttgagaccttgaggaagaacacacttccaggtaccaa-ataaatacaactaga 5672629  T
Q  394 ccaacccaagtgggttta 411  Q
    |||| |||||||||||||    
T  5672630 ccaatccaagtgggttta 5672647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 411
Target Start/End: Original strand, 5697583 - 5697699
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||||||||  |||||||||||||||    || |||||||||||| ||||||||||||||  |||||||| ||| || ||||   |||||| ||||||    
T  5697583 aagaagttaaaccaaccccctcaaattgagactaaagagaatcgaacttgagaccttgaggaagaacacacttccaggtaccaa-ataaatacaactaga 5697681  T
Q  394 ccaacccaagtgggttta 411  Q
    |||| |||||||||||||    
T  5697682 ccaatccaagtgggttta 5697699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 41487436 - 41487361
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    |||||||||| ||||||||||||||||   ||||||||| |||||||||| |||||||| || |||||||||||||||||    
T  41487436 agaatcgaacctgagaccttgaggaga---acactcccaagtcccaagcc-aataccaccaggccaacccaagtgggttt 41487361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 25021344 - 25021411
Alignment:
Q  341 atgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||| |||||||| | |||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  25021344 atgagactttgaggaggagcacactcccaggtcccaagcc-aataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 329 - 409
Target Start/End: Complemental strand, 30442567 - 30442488
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||| | ||||||||||||| | || ||||||| |||||||||| ||||||||| | ||||||||||||||||    
T  30442567 agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagcc-aataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 402
Target Start/End: Complemental strand, 7721450 - 7721376
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 402  Q
    |||||||||||||||||||||||||||||| |  ||||||||| ||||||| || ||||||||| ||||| |||||    
T  7721450 agagagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaaacc-aataccacttgaccaccccaa 7721376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 409
Target Start/End: Complemental strand, 43590985 - 43590907
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| |||||| |||||||| | |||||||||| |||||||||| |||||||| || ||||||||| ||||||    
T  43590985 gagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagcc-aataccaccaggccaacccaactgggtt 43590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 294 - 380
Target Start/End: Original strand, 29785263 - 29785349
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcc 380  Q
    |||||| |||| |||||||||||||||||    ||| |||||||||||||||||||||||||| | |||||| |||  |||||||||    
T  29785263 aagaagctaaactaaccccctcaaattggcaccagaaagaatcgaacatgagaccttgaggaggagcacacttccagatcccaagcc 29785349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 406
Target Start/End: Original strand, 15905636 - 15905746
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| ||||||||||| | |||||||   |||| ||||||||||| ||||||| | ||||| | |||||||||| |||||||||| |||||| | ||     
T  15905636 aagaagctaaattaacccacccaaattgacattagggagaatcgaacctgagacc-taaggaggagcacactcccaggtcccaagcc-aataccgccagg 15905733  T
Q  394 ccaacccaagtgg 406  Q
    |||||||||||||    
T  15905734 ccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 409
Target Start/End: Complemental strand, 24513912 - 24513797
Alignment:
Q  293 aaagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactag 392  Q
    ||||||||||||||| ||| | |||||||   | || || |||||||| ||||||||  |||||||  |||||||||  || |||||||| |||||||||    
T  24513912 aaagaagttaaattagcccacccaaattgacatcagtgaaaatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaa-taccactag 24513814  T
Q  393 accaacccaagtgggtt 409  Q
     ||||||||||||||||    
T  24513813 gccaacccaagtgggtt 24513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 410
Target Start/End: Original strand, 25655190 - 25655305
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| ||||  |||||| |||||||||    |||||||||||||| ||| ||||||||||| | ||||||| ||  ||||||| | |||||||||| |    
T  25655190 aagaagctaaaccaaccccttcaaattggcaccagagagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtc-aataccactaaa 25655288  T
Q  394 ccaacccaagtgggttt 410  Q
    |||||||| ||||||||    
T  25655289 ccaacccaggtgggttt 25655305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 23301564 - 23301678
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    ||||||||||||||  || |||||||| |   || |||||||| ||| ||||||||  ||||| | |||||||||| |||||||| ||| |||||| ||     
T  23301564 aagaagttaaattagtccactcaaattagcactaaagagaatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaa-taccaccagg 23301662  T
Q  394 ccaacccaagtgggtt 409  Q
    ||||||||||||||||    
T  23301663 ccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 30579416 - 30579334
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||| |||||||| |||||||||||||||    ||||||||| ||| |||||| |||||||| || |||||||||||||||||    
T  30579416 agagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagcc-aataccaccaggccaacccaagtgggttt 30579334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 409
Target Start/End: Original strand, 33869419 - 33869521
Alignment:
Q  306 taaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 405  Q
    ||||||||||||||||     ||||||||||||||  ||||||||||| || | |||||| ||| ||| |||||| ||||| ||||| ||||||||||||    
T  33869419 taaccccctcaaattgacaccagagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagcc-aatactactaggccaacccaagtg 33869517  T
Q  406 ggtt 409  Q
    ||||    
T  33869518 ggtt 33869521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 369
Target Start/End: Original strand, 37162312 - 37162387
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactccca 369  Q
    |||||| |||| ||| |||||||||||||    |||||||||||||| |||||||||||| |||| ||||||||||    
T  37162312 aagaagctaaactaatcccctcaaattggcaccagagagaatcgaacttgagaccttgagaagaagcacactccca 37162387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 42836011 - 42836077
Alignment:
Q  342 tgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||| |||||||||  | |||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  42836011 tgaggccttgaggaagagcacactcccaggtcccaagccaa-taccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 366
Target Start/End: Complemental strand, 48959278 - 48959240
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactc 366  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  48959278 gagagaatcgaacatgagaccttgaggaggaacacactc 48959240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 404
Target Start/End: Original strand, 41519259 - 41519335
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagt 404  Q
    |||||||| ||||| ||||||||||||||| | |||||||| |  ||||||| | ||||||||||| |||||||||||    
T  41519259 agagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtc-aataccactaggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 410
Target Start/End: Original strand, 18056773 - 18056852
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||| ||||||||| ||||| | |||||||| | | |||||| | |||||||| |||| |||||||||||||||    
T  18056773 gagaatcgaacctgagaccttcaggaggagcacactccgaagacccaagtc-aataccaccagactaacccaagtgggttt 18056852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 395
Target Start/End: Complemental strand, 33222451 - 33222384
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagacc 395  Q
    |||||||||||||| ||||||||||||||  |  ||||| ||| |||||||||| ||||||||||||||    
T  33222451 agagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagcc-aataccactagacc 33222384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 408
Target Start/End: Complemental strand, 35513546 - 35513467
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggt 408  Q
    |||| ||||||||||||||  | |||||| | ||||||| || ||||||||| |||||||||||| ||||||||| |||||    
T  35513546 gagaaaatcgaacatgagatatcgaggaggagcacactctcaagtcccaagc-aaataccactaggccaacccaaatgggt 35513467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 382
Target Start/End: Original strand, 37085511 - 37085599
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    |||||||||||||| ||| || |||||||| || | ||||||||||| ||| |||| |||||  | ||||||||||  |||||||||||    
T  37085511 aagaagttaaattagcccacttaaattggtattggggagaatcgaacctgaaacctcgaggatgagcacactcccaaatcccaagccaa 37085599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 406
Target Start/End: Original strand, 45976885 - 45976996
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||||||||||||||  || |||||||  | ||||| ||  |||| | | ||||| ||||| | |||||||||| ||| |||||||| |||||||||     
T  45976885 aagaagttaaattaacctacttaaattggcatcagagataaatgaacttaaaaccttaaggaggagcacactcccaggtcacaagccaa-taccactagg 45976983  T
Q  394 ccaacccaagtgg 406  Q
    |||||||||||||    
T  45976984 ccaacccaagtgg 45976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 406
Target Start/End: Original strand, 4566423 - 4566501
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgg 406  Q
    |||||||||| ||| |||||||||||| || || ||||||| | |||| ||| | ||||||||||| |||||||||||||    
T  4566423 agagagaatcaaacctgagaccttgagaaggaatacactccaaggtccgaagtc-aataccactaggccaacccaagtgg 4566501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 5668567 - 5668621
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||||| | |||||||| |||||| | |||||| ||||||||||||||||    
T  5668567 gagagaatcgatcctgagacctcgaggaggagcacacttccatgtcccaagccaa 5668621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 409
Target Start/End: Complemental strand, 7801253 - 7801180
Alignment:
Q  335 tcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||| ||||||||||| ||| | |||||||||| |||||||| | |||||||| || |||| |||||||||||    
T  7801253 tcgaacctgagaccttgaagaggagcacactcccaggtcccaagtc-aataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 15137634 - 15137553
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||| ||| ||||||||||||||| | |||||||| |  ||||||| | | |||||| || ||||||||||||||||    
T  15137634 agagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtc-agtaccaccaggccaacccaagtgggtt 15137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 409
Target Start/End: Original strand, 23735226 - 23735303
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||| ||||||| |||||||| | |||| |||||  | | ||||||| |||||||||| |||||||||||||||    
T  23735226 agaatcgaatatgagactttgaggaggagcacaatcccaaattctaagccaa-taccactagatcaacccaagtgggtt 23735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 45709704 - 45709785
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    |||| |||||||| |||||||| |||||| | ||||||| ||  |||||||| || ||||||||| ||||||||| |||||||    
T  45709704 gagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaa-taccactaggccaacccaaatgggttt 45709785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 11700271 - 11700191
Alignment:
Q  301 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||| ||| |||||||||| |  |||||||||||||| ||||||||||||||| | || |||| || ||| ||||||||    
T  11700271 taaattagcccactcaaattgg-cacagagagaatcgaacctgagaccttgaggaggagcaaactctcaagtctcaagccaa 11700191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 378
Target Start/End: Original strand, 21569997 - 21570078
Alignment:
Q  297 aagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaag 378  Q
    |||||||| ||||||||||||||||     ||||| |||||||| ||||||||||||||| | | ||||| || ||||||||    
T  21569997 aagttaaactaaccccctcaaattgacaccagagaaaatcgaacttgagaccttgaggaggagcgcactctcaagtcccaag 21570078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 403
Target Start/End: Complemental strand, 21877886 - 21877814
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaag 403  Q
    ||||||||||| ||||||||| ||||| | ||| |||||| |||||||| | ||||||||||| ||||| ||||    
T  21877886 gagaatcgaacgtgagaccttaaggaggagcaccctcccaggtcccaagtc-aataccactaggccaactcaag 21877814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 29385740 - 29385793
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    |||||||| ||| ||||||||||||||| | |||||||| | ||||||||||||    
T  29385740 agagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaa 29385793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 406
Target Start/End: Original strand, 18884403 - 18884478
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgg 406  Q
    ||||||||||| ||||||||| || |||| |||||||| | |||| ||| | |||||||| | ||||||||||||||    
T  18884403 gagaatcgaacttgagaccttaagaagaagcacactccgaggtccaaagtc-aataccaccaaaccaacccaagtgg 18884478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 409
Target Start/End: Complemental strand, 31835267 - 31835192
Alignment:
Q  333 aatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||| ||||||||||||||| | |||||||| |   |||||||| || ||||| || ||||||||||||||||    
T  31835267 aatcgaacctgagaccttgaggaggagcacactccaagcacccaagcc-aacaccaccaggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 410
Target Start/End: Complemental strand, 35119497 - 35119382
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| ||| || ||||||||||  ||| |||||||||||| ||| | ||||||||  | || || ||||  ||||||| | |||||||||||     
T  35119497 aagaagataaactaatcctctcaaattggcattaaagagaatcgaacctgaaatcttgaggatgagcatacacccagatcccaagtc-aataccactagg 35119399  T
Q  394 ccaacccaagtgggttt 410  Q
    ||||||||| |||||||    
T  35119398 ccaacccaaatgggttt 35119382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 410
Target Start/End: Original strand, 38374597 - 38374676
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||| | ||||||||||||| | |||||||  | |||||||||| || ||||| |  |||||||||||||||||    
T  38374597 gagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagcc-aacaccaccacgccaacccaagtgggttt 38374676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 409
Target Start/End: Complemental strand, 48772013 - 48771938
Alignment:
Q  333 aatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||| ||||||||  ||||| | ||||||||||  ||||||||| |||||||| |  ||||||||||||||||    
T  48772013 aatcgaacctgagacctcaaggaggagcacactcccagatcccaagcc-aataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 294 - 410
Target Start/End: Original strand, 12188265 - 12188380
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||||||||||||||   ||||||||||||||| ||| ||||||||||| | |||||||||| |||||||||| |||||||||||     
T  12188265 aagaagctaaactaaccccctcaaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagcc-aataccactagg 12188363  T
Q  394 ccaacccaagtgggttt 410  Q
    |||||||||||||||||    
T  12188364 ccaacccaagtgggttt 12188380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 33549184 - 33549103
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||||| |||||||| |||||| | |||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagcc-aataccaccagaccaacccaagtgggttt 33549103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 369
Target Start/End: Original strand, 15951264 - 15951339
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactccca 369  Q
    |||||| |||| |||||| |||||||||||   ||||||||| |||||||||||||||||||| | ||||||||||    
T  15951264 aagaagctaaactaaccctctcaaattggtaccagagagaattgaacatgagaccttgaggaggagcacactccca 15951339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 411
Target Start/End: Original strand, 31623001 - 31623069
Alignment:
Q  342 tgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||||||| |||||| | |||||||||| |||||||||| ||||||||  ||||||||||||||||||||    
T  31623001 tgagacctcgaggaggagcacactcccaggtcccaagcc-aataccaccggaccaacccaagtgggttta 31623069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 411
Target Start/End: Original strand, 10338174 - 10338252
Alignment:
Q  332 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    ||||||||| ||||||||||||||| | |||||||| | |||||||||| |||||||| |  |||||||||||| |||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagcc-aataccaccatgccaacccaagtgagttta 10338252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 409
Target Start/End: Complemental strand, 14558040 - 14557962
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| |||||||  |||||| | |||||| ||| |||||||||| || ||||| |||||||||||||||||||    
T  14558040 gagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagcc-aacaccaccagaccaacccaagtgggtt 14557962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 409
Target Start/End: Complemental strand, 21418548 - 21418470
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| |||||| | |||||| | |||||||||| |||||||||| |||||||| || ||||||||| ||||||    
T  21418548 gagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagcc-aataccaccaggccaacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 415
Target Start/End: Original strand, 22669 - 22753
Alignment:
Q  330 gagaatcgaacatg-agaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtttagagt 415  Q
    |||||| ||||||| |||||||||| |||  |||||||| | ||||||||||||| |||||||| ||||||||||||||||| ||||    
T  22669 gagaattgaacatggagaccttgagaagag-cacactccaaggtcccaagccaaa-accactagcccaacccaagtgggttttgagt 22753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 409
Target Start/End: Complemental strand, 30127477 - 30127400
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||| |||||||| || ||| | ||||||||||   |||||||||| |||||| |||||||||||||||||||    
T  30127477 agaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaa-taccaccagaccaacccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 6608078 - 6608150
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcc 367  Q
    |||||||||||||| ||| ||||||||| | | || ||||||| |||||||||| ||||| |||||||||||||    
T  6608078 aagaagttaaattagcccactcaaattgatat-agggagaatcaaacatgagacattgagaagaaacacactcc 6608150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 411
Target Start/End: Complemental strand, 13330201 - 13330085
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||| ||||||||||    |||||||||||||  ||||||||||||||| | |  ||||||| || | ||| ||| |||||||||     
T  13330201 aagaagctaaactaaccctctcaaattggcacaagagagaatcgaatctgagaccttgaggaggagcttactcccaagttcaaagtcaa-taccactagg 13330103  T
Q  394 ccaacccaagtgggttta 411  Q
     |||||||||||||||||    
T  13330102 tcaacccaagtgggttta 13330085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 413
Target Start/End: Original strand, 14199947 - 14200027
Alignment:
Q  332 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtttaga 413  Q
    ||||||||  ||||||||||||||| | |||||||||| ||| ||||||  ||||| ||||| |||||||| ||||||||||    
T  14199947 gaatcgaatctgagaccttgaggaggagcacactcccaagtctcaagcc-tatacctctagagcaacccaaatgggtttaga 14200027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 12234503 - 12234585
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    ||||||||||||| |||||||| |||  | | |||||||||| |||||||| | |||||||| || |||||| |||||||||||    
T  12234503 gagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtc-aataccaccaggccaacctaagtgggttta 12234585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 20744505 - 20744587
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||| |||||||||||||||||||||||| |||||||| |||| ||  || || |||||||| |  ||||| ||||||||||||    
T  20744505 gagataatcgaacatgagaccttgaggaggaacacacttccatatcaaaatcc-aataccacgaagccaactcaagtgggttta 20744587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 382
Target Start/End: Complemental strand, 20863468 - 20863401
Alignment:
Q  315 caaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||  |||||||||||| ||  ||||||||||||||| | |||||||| | ||||||||||||    
T  20863468 caaattggcattagagagaatcaaatctgagaccttgaggaggagcacactccaaagtcccaagccaa 20863401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 1056680 - 1056761
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||||| | | ||||||||||  | || ||||||| |||||| ||| |||||||||||  |||||||||||||||    
T  1056680 agagagaatcgaacttaaaaccttgaggatgagcatactcccaagtcccaggcc-aataccactaggtcaacccaagtgggtt 1056761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 11306136 - 11306194
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttga 352  Q
    |||||| |||| |||||||||||||||||    |||||||||||||| |||||||||||    
T  11306136 aagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttga 11306194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 407
Target Start/End: Original strand, 22995000 - 22995109
Alignment:
Q  297 aagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagacca 396  Q
    ||||||||||| ||| | | |||||||  | |||| ||||||||  ||||| |||||||||||||||||| || ||  |||| | |||||||| ||||||    
T  22995000 aagttaaattagcccacccgaattggtactggagaaaatcgaaccagagactttgaggagaaacacactcacaagtttcaagtc-aataccaccagacca 22995098  T
Q  397 acccaagtggg 407  Q
    || ||||||||    
T  22995099 actcaagtggg 22995109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 407
Target Start/End: Complemental strand, 23793400 - 23793291
Alignment:
Q  297 aagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagacca 396  Q
    ||||||||||| ||| | | |||||||  | |||| ||||||||  ||||| |||||||||||||||||| || ||  |||| | |||||||| ||||||    
T  23793400 aagttaaattagcccacccgaattggtactggagaaaatcgaaccagagactttgaggagaaacacactcacaagtttcaagtc-aataccaccagacca 23793302  T
Q  397 acccaagtggg 407  Q
    || ||||||||    
T  23793301 actcaagtggg 23793291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 32613137 - 32613214
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtggg 407  Q
    |||||||||||||||||| |||||| || | ||||||||||   |||||| | |||||||| || ||||||||||||||    
T  32613137 agagaatcgaacatgagatcttgagaaggagcacactcccagaccccaagtc-aataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 367
Target Start/End: Complemental strand, 98817 - 98744
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcc 367  Q
    |||||| |||| |||||| |||||||||   ||| ||| ||| |||| ||||||||||||||| ||||||||||    
T  98817 aagaagctaaactaaccctctcaaattgacattaaagataattgaacttgagaccttgaggaggaacacactcc 98744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 367
Target Start/End: Complemental strand, 346608 - 346571
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcc 367  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  346608 gagaatcgaacatgagacctcgaggagaagcacactcc 346571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 2616556 - 2616476
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||| ||||| ||||||||||| ||| | |||||| ||||| | ||||| || ||||||||| ||||||||| ||||||    
T  2616556 gagagaaacgaacttgagaccttgaagaggagcacacttccatgactcaagctaa-taccactaggccaacccaaatgggtt 2616476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 381
Target Start/End: Complemental strand, 19162863 - 19162810
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcca 381  Q
    ||||||||||||| ||||| || |||||| | ||||||||| ||||||||||||    
T  19162863 gagagaatcgaacctgagatctcgaggaggagcacactcccgtgtcccaagcca 19162810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 378
Target Start/End: Original strand, 23910108 - 23910157
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaag 378  Q
    ||||| |||||| ||||||||||||||| | |||||||||| ||||||||    
T  23910108 agagattcgaacctgagaccttgaggaggagcacactcccaggtcccaag 23910157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 409
Target Start/End: Original strand, 19638001 - 19638080
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||| ||| ||||||||||||  | | |||||||||| || ||| ||| ||||||||| ||||||| ||||||||||    
T  19638001 agagaatcaaacctgagaccttgagctggagcacactcccaggttccacgcc-aataccactggaccaacgcaagtgggtt 19638080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 409
Target Start/End: Original strand, 22995112 - 22995187
Alignment:
Q  333 aatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||  ||||| |||||||||||||||||| || ||  |||| | |||||||| |||||||| ||||||||||    
T  22995112 aatcgaaccagagactttgaggagaaacacactcacaagtttcaagtc-aataccaccagaccaactcaagtgggtt 22995187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 409
Target Start/End: Complemental strand, 23793288 - 23793213
Alignment:
Q  333 aatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||  ||||| |||||||||||||||||| || ||  |||| | |||||||| |||||||| ||||||||||    
T  23793288 aatcgaaccagagactttgaggagaaacacactcacaagtttcaagtc-aataccaccagaccaactcaagtgggtt 23793213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 8e-28; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 18540412 - 18540298
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| ||||||||||| ||||||||||    |||||||||||||| |||||||||||||||||  ||||||||| |||||||||| |||||||||||     
T  18540412 aagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagcc-aataccactagg 18540314  T
Q  394 ccaacccaagtgggtt 409  Q
    ||||||||||||||||    
T  18540313 ccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 330 - 413
Target Start/End: Original strand, 19703485 - 19703567
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtttaga 413  Q
    ||||||||||| ||||||||||||||| | ||||||| || |||||||||| ||||||||||| ||||||||||||||||||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagcc-aataccactaggccaacccaagtgggtttaga 19703567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 330 - 411
Target Start/End: Complemental strand, 16852418 - 16852338
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    ||||||||||| |||||||| |||||| | |||||||||| |||||||||| ||||||||||| ||||||||||||||||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagcc-aataccactaggccaacccaagtgggttta 16852338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 3624660 - 3624582
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtggg 407  Q
    ||||||||||||| ||||||||||| ||| | |||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  3624660 gagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagcc-aataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 410
Target Start/End: Complemental strand, 28783138 - 28783059
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||||||||||||||||||| | |||||||||| ||| |||||| |||||||| |  |||||||||||||||||    
T  28783138 gagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagcc-aataccaccaagccaacccaagtgggttt 28783059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 410
Target Start/End: Original strand, 44780108 - 44780191
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||| ||||| ||| ||||||||||||||| | |||||||||| |||||||||| ||| ||||||| |||||||||||||||||    
T  44780108 tagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagcc-aatgccactaggccaacccaagtgggttt 44780191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 968442 - 968362
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||||| |||||||| |||||| | |||||||||| |||||||||| |||||||| || ||||| ||||||||||    
T  968442 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagcc-aataccaccaggccaactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 407
Target Start/End: Complemental strand, 2203558 - 2203494
Alignment:
Q  342 tgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtggg 407  Q
    ||||||||||||||| | |||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  2203558 tgagaccttgaggaggagcacactcccaggtcccaagcc-aataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 18897243 - 18897164
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||||||||||||||||||||||||| | |||||||  | ||||||| || || |||||||| ||||||||||||||||||    
T  18897243 agaatcgaacatgagaccttgaggaggagcacactctaaggtcccaaacc-aacaccactaggccaacccaagtgggttta 18897164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 6436517 - 6436631
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||||||||||||| |   ||||||||| | |||| ||||||||  |||||||||| |||| | |||||||| | |||||||||| |||||||| ||     
T  6436517 aagaagttaaattaactcatccaaattggtttcagagggaatcgaatctgagaccttgcggaggagcacactcctaagtcccaagcc-aataccaccagg 6436615  T
Q  394 ccaacccaagtgggtt 409  Q
     |||||||||||||||    
T  6436616 gcaacccaagtgggtt 6436631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 11819858 - 11819776
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||| ||||||||| ||||||||||||||| | |||||||||| ||||||||||  ||||||||||  |||||||| ||||||    
T  11819858 tagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcc-tataccactagggcaacccaaatgggtt 11819776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 33017327 - 33017214
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    ||||||||||| ||||||| |||||||||    |||||||||||||| ||||||||||||||| | |||||| ||| || ||||||| ||||  || ||     
T  33017327 aagaagttaaactaacccc-tcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagcc-aatatgacaagg 33017230  T
Q  394 ccaacccaagtgggtt 409  Q
    ||||||||||||||||    
T  33017229 ccaacccaagtgggtt 33017214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 23361644 - 23361725
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||| |||| ||||||||||||||| | ||||||||||| ||||||| | |||||||| ||  |||||||||||||||    
T  23361644 agagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtc-aataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 30483879 - 30483960
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||| |||| ||||||  ||||||| | ||||||||||| ||||||||| ||||||||| | ||||||||||||||||    
T  30483879 agagagaattgaacctgagactctgaggaggagcacactcccatatcccaagcc-aataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 34628722 - 34628668
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||||||| |||||| |||||||||||||||||||||  |||||||||||    
T  34628722 gagagaatcgaacctgagactttgaggagaaacacactcccagatcccaagccaa 34628668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 407
Target Start/End: Original strand, 8794308 - 8794419
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||||||||||| | ||||||||   |||||||||||||| ||||||| ||||||| | |||||| ||| || ||||||| ||||||||||      
T  8794308 aagaagctaaattaacccctt-aaattggtaccagagagaatcgaacctgagaccctgaggaggagcacacttccaggttccaagcc-aataccactatg 8794405  T
Q  394 ccaacccaagtggg 407  Q
    |||| |||||||||    
T  8794406 ccaatccaagtggg 8794419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 410
Target Start/End: Complemental strand, 12988526 - 12988427
Alignment:
Q  310 cccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||||    |||||| ||||||| ||| ||||||||||| | |||||| ||| || ||||||| ||||||||||| |||| |||||||||||    
T  12988526 cccctcaaattggcaccagagaggatcgaacctgaaaccttgaggaggagcacacttccaggttccaagcc-aataccactaggccaatccaagtgggtt 12988428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 366
Target Start/End: Original strand, 31408084 - 31408156
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactc 366  Q
    |||||| |||||||||||||| ||||||   |||||||||||||||| ||| ||||||||||| | |||||||    
T  31408084 aagaagctaaattaacccccttaaattgacattagagagaatcgaacctgaaaccttgaggaggagcacactc 31408156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 35641897 - 35641980
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtttag 412  Q
    ||||||||||||| |||||| | |||||| | ||||||||||  || |||||| | |||||| ||||||||||||||||||||||    
T  35641897 gagagaatcgaacctgagacatcgaggaggagcacactcccaaatctcaagccga-taccaccagaccaacccaagtgggtttag 35641980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 6569733 - 6569847
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| ||||||||||||||||     | |||||||||||||||| ||||  ||||| | ||||||||||  ||||||||| |||| ||||||     
T  6569733 aagaagctaaactaaccccctcaaattgacaccaaagagaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagcc-aatatcactagg 6569831  T
Q  394 ccaacccaagtgggtt 409  Q
    |||||| |||||||||    
T  6569832 ccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 27750812 - 27750730
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||| ||||||||| ||||||||||||||| | |||||||||| ||||||||||  ||||||| ||  |||||||| ||||||    
T  27750812 tagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcc-tataccacgagggcaacccaaatgggtt 27750730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 381
Target Start/End: Complemental strand, 27871782 - 27871695
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcca 381  Q
    ||||||||||| || | | ||||||||| | |||||||||||||||| |||||| |||||||| |||| ||||| |  ||||||||||    
T  27871782 aagaagttaaactagctcactcaaattgatattagagagaatcgaacttgagactttgaggaggaacaaactccaagatcccaagcca 27871695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 411
Target Start/End: Original strand, 3058046 - 3058127
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||||||||||| ||||||||||  ||| | |||||||||| | ||||| || |||||||| |||||||||||| ||||||||    
T  3058046 agagaatcgaacctgagaccttgcagaggagcacactcccaagacccaaacc-aataccaccagaccaacccaaatgggttta 3058127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 412
Target Start/End: Complemental strand, 5264610 - 5264541
Alignment:
Q  342 tgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtttag 412  Q
    |||||||| |||||| | |||| ||||| || ||||||||| ||||||||| |||||||||||||||||||    
T  5264610 tgagacctcgaggaggagcacattcccaggttccaagccaa-taccactaggccaacccaagtgggtttag 5264541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 8485079 - 8484998
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    |||||||||||| |||||||||  | ||| | ||||||| || ||||||||| ||||||||| || |||||||||||||||||    
T  8485079 gagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagc-aaataccaccaggccaacccaagtgggttt 8484998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 391
Target Start/End: Complemental strand, 6536634 - 6536538
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccacta 391  Q
    |||||| ||||||||||| |  |||||||    ||||||||| |||| ||||||||||||||| | |||||||| | |||||||||| ||||||||||    
T  6536634 aagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagcc-aataccacta 6536538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 415
Target Start/End: Complemental strand, 36205273 - 36205189
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtttagagt 415  Q
    ||||||||||||||||||||||||||| | ||||||||||  || ||| || |||| ||  |||||||||||||||| ||| ||||    
T  36205273 gagaatcgaacatgagaccttgaggaggagcacactcccagatctcaaacc-aataacatcagaccaacccaagtggatttggagt 36205189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 13129749 - 13129666
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||||||||||||| ||| ||||||||||| | | |||||||| ||||||| || ||| ||||| | | ||||||||||||||||    
T  13129749 agagagaatcgaacctgaaaccttgaggaggagcgcactcccaagtcccaaacc-aatgccactgggctaacccaagtgggttta 13129666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 20994419 - 20994534
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgagg-agaaacacactcccatgtcccaagccaaataccactag 392  Q
    |||||| ||||||| |||   |||||||||   ||||| |||||| | |||||| |||||| || | |||||||||| |||||||| ||| |||||||||    
T  20994419 aagaagctaaattagcccatccaaattggtaccagagataatcgatcctgagactttgagggaggagcacactcccaggtcccaagtcaa-taccactag 20994517  T
Q  393 accaacccaagtgggtt 409  Q
     ||||||||||||||||    
T  20994518 gccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 409
Target Start/End: Complemental strand, 26688936 - 26688865
Alignment:
Q  337 gaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||| ||||||||||||||| | |||||||| | |||||||||| || ||||| || ||||||||||||||||    
T  26688936 gaacctgagaccttgaggaggagcacactccaaggtcccaagcc-aacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 409
Target Start/End: Complemental strand, 29431090 - 29431011
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||| |||| |||  ||||| | |||||||||| |||||||||| |||||| | || ||||||||||||||||    
T  29431090 agagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagcc-aataccgccaggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 408
Target Start/End: Original strand, 29858049 - 29858124
Alignment:
Q  332 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggt 408  Q
    ||||||||| |||||||| |||||| | |||||||||  |||||||||| |||||||| || |||| ||||||||||    
T  29858049 gaatcgaacctgagacctcgaggaggagcacactccctggtcccaagcc-aataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 410
Target Start/End: Original strand, 11793520 - 11793598
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    |||||| ||| | ||||||||||||| | |||||||| | ||||||||| ||  ||||| ||||||||||||||||||||    
T  11793520 agaatcaaacctaagaccttgaggaggagcacactccaaggtcccaagcgaac-accacaagaccaacccaagtgggttt 11793598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 398
Target Start/End: Original strand, 35690059 - 35690129
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaac 398  Q
    |||||||||||||| ||||||||||||||| | || || ||||  ||||||||| ||||||||||| |||||    
T  35690059 agagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagcc-aataccactaggccaac 35690129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 4830558 - 4830486
Alignment:
Q  337 gaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    |||| |||||||| |||||| ||||||||| ||  |||||| | ||||||||| || |||||||||||||||||    
T  4830558 gaacctgagacctcgaggaggaacacactctcagatcccaaac-aaataccaccaggccaacccaagtgggttt 4830486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 409
Target Start/End: Original strand, 23874386 - 23874458
Alignment:
Q  336 cgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||| |||||||| ||||||   || | ||||| |||||||||||| ||||||||| ||||||||||||||||    
T  23874386 cgaacctgagacctcgaggaggcgcagattcccaggtcccaagccaa-taccactaggccaacccaagtgggtt 23874458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 410
Target Start/End: Complemental strand, 28566183 - 28566104
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||||||||| ||||||| || | |||||||  | ||||||| |||| |||||||||  ||||||||||||||||    
T  28566183 agagaatcgaacatgag-ccttgagaaggagcacactctaaggtcccaaaccaa-taccactaggtcaacccaagtgggttt 28566104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 410
Target Start/End: Complemental strand, 28573806 - 28573727
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||||||||| ||||||| || | |||||||  | ||||||| |||| |||||||||  ||||||||||||||||    
T  28573806 agagaatcgaacatgag-ccttgagaaggagcacactctaaggtcccaaaccaa-taccactaggtcaacccaagtgggttt 28573727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 35287796 - 35287716
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||||||||| ||||||||||| | |||||||| |  || |||||| || ||||| || || |||||||||||||    
T  35287796 gagagaatcgaacatgataccttgaggaggagcacactccaaaatctcaagcc-aacaccaccaggcctacccaagtgggtt 35287716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 363
Target Start/End: Original strand, 43594312 - 43594349
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacaca 363  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  43594312 tagagagaatcgaacctgagaccttgaggaggaacaca 43594349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 374
Target Start/End: Original strand, 45053493 - 45053533
Alignment:
Q  333 aatcgaacatgagaccttgaggagaaacacactcccatgtcc 374  Q
    |||||||| |||||||||||||||||||||||||| ||||||    
T  45053493 aatcgaac-tgagaccttgaggagaaacacactccaatgtcc 45053533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 409
Target Start/End: Original strand, 11518846 - 11518953
Alignment:
Q  301 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccc 400  Q
    ||||||| ||| |||||||||   ||| || ||||||||| | |||||||||||||    ||||||||| || |||||||  |||||||||| | |||||    
T  11518846 taaattagcccactcaaattgacattatagtgaatcgaacctaagaccttgaggaggggtacactcccaagttccaagcc-tataccactaggctaaccc 11518944  T
Q  401 aagtgggtt 409  Q
    |||||||||    
T  11518945 aagtgggtt 11518953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 30113091 - 30113039
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    |||||| |||||||| || |||||||||| || ||||||||||| ||||||||    
T  30113091 gagaatggaacatgacacattgaggagaagcatactcccatgtctcaagccaa 30113039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 5e-26; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 294 - 406
Target Start/End: Original strand, 7292760 - 7292871
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||||||||||||||   ||||||||||||||| |||||| |||||||| | |||||||||| || ||||||| ||||||||||||    
T  7292760 aagaagctaaactaaccccctcaaattggcactagagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagcc-aataccactaga 7292858  T
Q  394 ccaacccaagtgg 406  Q
    |||||||||||||    
T  7292859 ccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 301 - 409
Target Start/End: Original strand, 37109320 - 37109427
Alignment:
Q  301 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccc 400  Q
    |||| |||||||||||||||||    |||||||||||||| ||||||||||||||| | |||||||||| |||||||||| ||||||||||| |||||||    
T  37109320 taaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagcc-aataccactaggccaaccc 37109418  T
Q  401 aagtgggtt 409  Q
    |||||||||    
T  37109419 aagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 31759620 - 31759734
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| ||| ||| ||||||||||   ||| |||||||||  ||||||||||||||| | |||||||||| |||||||||| ||||||||||||    
T  31759620 aagaagctaaactaatcccttcaaattggtaccagaaagaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagcc-aataccactaga 31759718  T
Q  394 ccaacccaagtgggtt 409  Q
     |||||||||||||||    
T  31759719 tcaacccaagtgggtt 31759734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 37274454 - 37274536
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||||| | ||||||||||||| | |||||||||| |||||||||||| ||| ||||| ||||||||||||||||    
T  37274454 agagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgactaggccaacccaagtgggtt 37274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 294 - 382
Target Start/End: Complemental strand, 23378070 - 23377982
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    |||||| |||| || ||||||||||||||   ||||||||||||||| ||||||||||||||| | |||||||||| ||||||||||||    
T  23378070 aagaagctaaactagccccctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaa 23377982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 15180852 - 15180741
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||||||||||||||    |||||||||||||| | |||||||||||||    ||||||||| |||||||||| ||||||||||||    
T  15180852 aagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctaagaccttgaggag---tacactcccaggtcccaagcc-aataccactaga 15180757  T
Q  394 ccaacccaagtgggtt 409  Q
    |||| | |||||||||    
T  15180756 ccaatctaagtgggtt 15180741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 402
Target Start/End: Original strand, 44194946 - 44195053
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    ||||||||||| |||| ||||||||||||    ||||||||| ||||||||||||||||| ||||||||||| |||  | |||| || ||||||||| ||    
T  44194946 aagaagttaaactaactccctcaaattggcaccagagagaattgaacatgagaccttgagaagaaacacacttccagattccaaacc-aataccactgga 44195044  T
Q  394 ccaacccaa 402  Q
    |||||||||    
T  44195045 ccaacccaa 44195053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 2622390 - 2622475
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcca---aataccactagaccaacccaagtgggtt 409  Q
    |||||||||||||| |||||| | |||||| | |||||||||| |||||||||||   ||||||||||| ||||||||||||||||    
T  2622390 agagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaattaataccactaggccaacccaagtgggtt 2622475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 7949449 - 7949531
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    |||||||||||||| ||||||||||||||| | |||||||| | |||||||||| |||||| |||| ||| |||||||||||||    
T  7949449 agagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagcc-aataccgctaggccagcccaagtgggttt 7949531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 411
Target Start/End: Original strand, 2184994 - 2185111
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||||||||||||||  |  ||||||||||||| |||||| ||||| || | |||||||||| || ||||||| | |||||||||     
T  2184994 aagaagctaaactaaccccctcaaattggcatcggagagaatcgaacctgagactttgagaaggagcacactcccaggttccaagcc-attaccactagg 2185092  T
Q  394 ccaaccc-aagtgggttta 411  Q
    ||||||| |||||||||||    
T  2185093 ccaacccgaagtgggttta 2185111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 38869882 - 38869785
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactag 392  Q
    |||||| |||| |||||||||||||||||    |||| ||||||||| ||||||||||||||| | ||||||||||  ||||||||| |||||||||||    
T  38869882 aagaagctaaactaaccccctcaaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcc-aataccactag 38869785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 411
Target Start/End: Original strand, 19680750 - 19680866
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| ||||| ||| |||||||    |||||||||||||| | ||||||||||||  | |||||||||| |||||||| | |||||||||||     
T  19680750 aagaagctaaactaacctccttaaattggcaccagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaag-cgaataccactagg 19680848  T
Q  394 ccaacccaagtgggttta 411  Q
    |||| |||||||||||||    
T  19680849 ccaatccaagtgggttta 19680866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 405
Target Start/End: Complemental strand, 13901825 - 13901746
Alignment:
Q  325 ttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 405  Q
    ||||| ||||| |||| ||||||||  ||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  13901825 ttagatagaattgaacttgagacctcaaggaggaacacactcccaggtctcaagcc-aataccactagaccaacccaagtg 13901746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 4249291 - 4249177
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||||||||||||||    |||||||||| ||| ||||||||||||||| | |||||||| |  |||||||||  ||||||||||     
T  4249291 aagaagctaaactaaccccctcaaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcc-tataccactagg 4249193  T
Q  394 ccaacccaagtgggtt 409  Q
    |||| | |||||||||    
T  4249192 ccaagcgaagtgggtt 4249177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 409
Target Start/End: Original strand, 8030198 - 8030280
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||| ||||||||| ||||||||||||||| | |||||||||| ||||||||||  ||||||||||  ||| |||||||||||    
T  8030198 tagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcc-tataccactagggcaatccaagtgggtt 8030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 409
Target Start/End: Original strand, 19238575 - 19238653
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||  ||||||| |||||| | |||||||||| |||||||||| |||||||| || ||||||||||||||||    
T  19238575 gagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagcc-aataccaccaggccaacccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 409
Target Start/End: Complemental strand, 46295175 - 46295097
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| ||||||||||||||| | |||||||| |||||||||||| || || || ||||||||| |||||||||    
T  46295175 gagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagcc-aacactaccagaccaacctaagtgggtt 46295097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 20771025 - 20770955
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacac 364  Q
    |||||||||||||||||||||||||||||     ||||||||||||| |||||||||||| || |||||||    
T  20771025 aagaagttaaattaaccccctcaaattggcacctgagagaatcgaacttgagaccttgagaaggaacacac 20770955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 402
Target Start/End: Original strand, 49576890 - 49576963
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 402  Q
    ||||||||||||| ||||||||||||||| | |||||||||| |||| ||||| |||||||| || |||||||||    
T  49576890 gagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagcc-aataccaccaggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 13015507 - 13015444
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactag 392  Q
    |||||||||||||||||||| | |||||| | |||||||||| |||||||||| |||||||||||    
T  13015507 gagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagcc-aataccactag 13015444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 410
Target Start/End: Original strand, 37720212 - 37720291
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||| || ||||||||||||   |||||||||| |||||||||| |||| ||| || |||||||||||||||||    
T  37720212 gagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagcc-aataacaccaggccaacccaagtgggttt 37720291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 409
Target Start/End: Complemental strand, 20609000 - 20608922
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| ||||||||||| |||||||||||||||   || |||||| |||||||  ||| |||||||||||||||    
T  20609000 gagaatcgaacttgagaccttgatgagaaacacactcccggatctcaagcc-aataccatcagatcaacccaagtgggtt 20608922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 409
Target Start/End: Complemental strand, 39509148 - 39509070
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| |||||||| |||||| | ||||||||||  ||||||||| | |||||  |||||||||||||||||||    
T  39509148 gagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagcc-attaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 409
Target Start/End: Original strand, 55427198 - 55427276
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| |||||||| ||| || | || ||||||| |||||||||| |||||||| || ||||||||||||||||    
T  55427198 gagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagcc-aataccaccaggccaacccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 409
Target Start/End: Complemental strand, 13496318 - 13496241
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| ||||||| || ||| ||||||||| ||||||||||| | |||||||| |  ||||||||||||||||    
T  13496318 agaatcgaacacgagacctcgaagaggaacacactcacatgtcccaagtc-aataccaccatgccaacccaagtgggtt 13496241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 24991641 - 24991579
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggag 356  Q
    ||||||||||| |||| |||||||||| ||  |||||| |||||||| |||||||||||||||    
T  24991641 aagaagttaaactaactccctcaaattagtactagagaaaatcgaacctgagaccttgaggag 24991579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 410
Target Start/End: Complemental strand, 29195186 - 29195094
Alignment:
Q  316 aaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    |||||||  |||||||||||||||| || |||||||| ||| | |||||||| | |||||||||| || ||||| || |||||||||||||||||    
T  29195186 aaattggcattagagagaatcgaacttgcgaccttga-gaggagcacactccaaggtcccaagcc-aacaccaccaggccaacccaagtgggttt 29195094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 46545792 - 46545711
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||| |||||||  ||||| ||||||||| | ||||||| || ||| |||||||| ||||||||| ||||||||||||||||    
T  46545792 agagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaa-taccactaggccaacccaagtgggtt 46545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 410
Target Start/End: Original strand, 51250522 - 51250599
Alignment:
Q  332 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||| ||||| ||||||| | | ||||||||||  ||||||||| |||||||| || |||||||||||||||||    
T  51250522 gaatcgaacttgagatcttgaggcggagcacactcccagatcccaagcc-aataccaccaggccaacccaagtgggttt 51250599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 20216217 - 20216153
Alignment:
Q  301 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactc 366  Q
    ||||||||||||| |||||||   || || ||||||||||||||||| ||||||||||||||||||    
T  20216217 taaattaaccccc-caaattgacattggaaagaatcgaacatgagactttgaggagaaacacactc 20216153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 409
Target Start/End: Complemental strand, 31826685 - 31826609
Alignment:
Q  332 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||| ||||||||||||||| | ||||||| ||  |||||||||  ||||||||||  |||||||||||||||    
T  31826685 gaatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcc-tataccactagggcaacccaagtgggtt 31826609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 406
Target Start/End: Original strand, 33438495 - 33438551
Alignment:
Q  349 ttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgg 406  Q
    ||||||||||||| ||| ||| || ||||||||| |||||||||||||||||||||||    
T  33438495 ttgaggagaaacatacttccaggttccaagccaa-taccactagaccaacccaagtgg 33438551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 378
Target Start/End: Original strand, 11592115 - 11592199
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaag 378  Q
    |||||||||||||||||  |||||||||||   ||||| |||||||| | |||||| |||||| | ||||||| || ||||||||    
T  11592115 aagaagttaaattaaccaactcaaattggttccagagataatcgaacctaagacctggaggaggagcacactctcaggtcccaag 11592199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 32992690 - 32992638
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||||| ||||||||||||||| | |||||||| | ||||||||||||    
T  32992690 gagaatcgaacttgagaccttgaggaggagcacactccaaggtcccaagccaa 32992638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 382
Target Start/End: Original strand, 33632098 - 33632186
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||||| ||||||||||||||||     |||||||||||| | || |||||||||||| | || |||||||| | |||||||||    
T  33632098 aagaagttaaactaaccccctcaaattgacaccagagagaatcgatcctgggaccttgaggaggagcatactcccatattccaagccaa 33632186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 1730451 - 1730565
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| ||| ||||||||||| |    ||||||||| |||  |||||| |||| ||| | ||||||| || |||||||||| |||||||||||     
T  1730451 aagaagctaaactaatcccctcaaattagcaccagagagaatagaatctgagactttgaagaggagcacactctcaggtcccaagcc-aataccactagg 1730549  T
Q  394 ccaacccaagtgggtt 409  Q
     |||||||||||||||    
T  1730550 tcaacccaagtgggtt 1730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 24234725 - 24234671
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||||||| ||||||||| ||||  | |||||||||| ||||||||||||    
T  24234725 gagagaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaa 24234671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 410
Target Start/End: Original strand, 27965538 - 27965587
Alignment:
Q  360 cacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||  ||||||||||| ||||||||| |||||||||||||||||    
T  27965538 cacactcccagatcccaagccaa-taccactaggccaacccaagtgggttt 27965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 391
Target Start/End: Complemental strand, 16581807 - 16581711
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccacta 391  Q
    |||||| |||| |||||| ||||||||||    ||||| ||| |||| ||||||||||||||| | || ||||||| || ||||||| ||||||||||    
T  16581807 aagaagctaaactaaccctctcaaattggcaccagagataatagaacctgagaccttgaggaggagcagactcccaggttccaagcc-aataccacta 16581711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 378
Target Start/End: Original strand, 19583150 - 19583199
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaag 378  Q
    |||||||||||| ||||| ||| |||||||||||||| ||| ||||||||    
T  19583150 agagaatcgaacttgagatcttaaggagaaacacactaccaagtcccaag 19583199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 411
Target Start/End: Original strand, 21660138 - 21660222
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||||| |||||||| |||||||| |||||  | ||||||||||  || |||| ||| |||||| |||||||||||||| ||||||    
T  21660138 tagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaa-taccaccagaccaacccaagttggttta 21660222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 411
Target Start/End: Original strand, 21668902 - 21668986
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||||| |||||||| |||||||| |||||  | ||||||||||  || |||| ||| |||||| |||||||||||||| ||||||    
T  21668902 tagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaa-taccaccagaccaacccaagttggttta 21668986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 46329241 - 46329192
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcc 380  Q
    |||||||||| ||| ||||||||||| | |||||||||| ||||||||||    
T  46329241 agaatcgaacctgataccttgaggaggagcacactcccaggtcccaagcc 46329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 405
Target Start/End: Original strand, 4911229 - 4911304
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 405  Q
    ||||||||||| |||| || ||||| || | |||||||| | ||||||||| || |||||| |||||||||||||||    
T  4911229 agagaatcgaatatgaaacgttgagtaggagcacactcctaagtcccaagctaa-taccaccagaccaacccaagtg 4911304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 11418301 - 11418218
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    ||||| ||||||||||| |||||||||  | | |||||| |||  ||||||| ||| || ||||||||||||||||||| |||||    
T  11418301 agagataatcgaacatgggaccttgagtcggagcacacttccaaatcccaagtcaa-tatcactagaccaacccaagtgagttta 11418218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 412
Target Start/End: Complemental strand, 24827897 - 24827822
Alignment:
Q  336 cgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtttag 412  Q
    ||||| |||||||| |||||| | | |||||||| |||||||| ||| ||||||  |||||||| ||||||||||||    
T  24827897 cgaacctgagacctcgaggaggagcgcactcccaggtcccaagtcaa-taccaccggaccaaccaaagtgggtttag 24827822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 37443780 - 37443702
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||| |||||||||||| |||| |||||| |   ||||||||  ||||||||||| |||||||||  |||||||||||||||    
T  37443780 agagataatcgaacatgaaacctcgaggagta---cactcccagatcccaagccaa-taccactaggtcaacccaagtgggtt 37443702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 407
Target Start/End: Original strand, 40283985 - 40284060
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtggg 407  Q
    |||||| ||| | ||||||||||||||  |||||||||| |||||||||| |||||||  |  ||||||||||||||    
T  40283985 agaatcaaaccttagaccttgaggagatgcacactcccaagtcccaagcc-aataccatcatgccaacccaagtggg 40284060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 409
Target Start/End: Original strand, 55256197 - 55256275
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccacta-gaccaacccaagtgggtt 409  Q
    ||||||||||| |||| |||||||| ||| |||||||| ||||| |||||| |||||||| | | ||||||||||||||||    
T  55256197 gagaatcgaacctgaggccttgagg-gaagcacactccaatgtcacaagcc-aataccaccaggcccaacccaagtgggtt 55256275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 305 - 410
Target Start/End: Original strand, 26078024 - 26078128
Alignment:
Q  305 ttaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagt 404  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| ||||| || ||||||| ||||||| || ||||||||||| |||||||||||    
T  26078024 ttaaccccctcaaattggcactagagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaacc-aataccactaggccaacccaagt 26078122  T
Q  405 gggttt 410  Q
    ||||||    
T  26078123 gggttt 26078128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 307 - 410
Target Start/End: Complemental strand, 34984907 - 34984805
Alignment:
Q  307 aaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgg 406  Q
    ||||||||||||||||    |||||||||||||| | ||||||||||||| | |||||||||| || ||||||| |||||||||||||||||||||||||    
T  34984907 aaccccctcaaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagcc-aataccactagaccaacccaagtgg 34984809  T
Q  407 gttt 410  Q
    ||||    
T  34984808 gttt 34984805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 330 - 411
Target Start/End: Original strand, 30883196 - 30883276
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||||| |||| ||||||||||||||| | |||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  30883196 gagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagcc-aataccactagaccaacccaagtgggttta 30883276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 25627138 - 25627057
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||||| ||||||||||||||| | |||||||||| || ||||||| ||||||||||| ||||||||||||||||    
T  25627138 agagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcc-aataccactaggccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 306 - 410
Target Start/End: Complemental strand, 14285263 - 14285160
Alignment:
Q  306 taaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 405  Q
    |||||||||||||||||    |||||||||||||| ||||||||||||||| | |||||||||| || ||||||| ||| ||||| | ||||||||||||    
T  14285263 taaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagcc-aattccactcggccaacccaagtg 14285165  T
Q  406 ggttt 410  Q
    |||||    
T  14285164 ggttt 14285160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 294 - 410
Target Start/End: Complemental strand, 22737196 - 22737081
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| ||||||||||| |  |||||| | | |||| ||||||||| |||||| ||| |||| | |||||| ||| |||||||||||| ||||||||||    
T  22737196 aagaagctaaattaacccacctaaattgatatcagagggaatcgaacctgagacattggggaggagcacacttccaagtcccaagccaa-taccactaga 22737098  T
Q  394 ccaacccaagtgggttt 410  Q
    |||||||||||||||||    
T  22737097 ccaacccaagtgggttt 22737081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 409
Target Start/End: Original strand, 21549115 - 21549213
Alignment:
Q  310 cccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||||   |||||| |||||||| |||||| || ||||| | |||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  21549115 cccctcaaattggcactagagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagcc-aataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 16638929 - 16638865
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaa 358  Q
    |||||||||||||||||| ||||||||||| | |||||||||||||||||||| ||||| |||||    
T  16638929 aagaagttaaattaaccctctcaaattggtataagagagaatcgaacatgagatcttgaagagaa 16638865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 7918431 - 7918545
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| ||| |||||||||||||    |||||||||||||| | ||||||||||||| |   |||||||| || ||||||| |||||||||||     
T  7918431 aagaagctaaactaaacccctcaaattggcaccagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagcc-aataccactagg 7918529  T
Q  394 ccaacccaagtgggtt 409  Q
    ||||||||||||||||    
T  7918530 ccaacccaagtgggtt 7918545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 406
Target Start/End: Complemental strand, 12877774 - 12877696
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgg 406  Q
    |||||||||||||| |||||| |||||||||||||||||||||  |||||| || ||| ||||||||||||| |||||||    
T  12877774 agagagaatcgaacctgagacattgaggagaaacacactcccaaatcccaaacc-aatgccactagaccaactcaagtgg 12877696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 16773921 - 16773807
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| ||||||| ||| |  |||||||  | |||||||||||||| |||||||| |||||| | |||||||||| |||||||| | |||||||| |||    
T  16773921 aagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtc-aataccaccaga 16773823  T
Q  394 ccaacccaagtgggtt 409  Q
    ||||| ||||||||||    
T  16773822 ccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 411
Target Start/End: Complemental strand, 16436692 - 16436616
Alignment:
Q  333 aatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||||||||||||||||||||||| | |||||| ||| |||||||||| ||||||||||| |||||||||||| |||||    
T  16436692 aatcgaacatgagaccttgaggaggagcacact-ccaagtcccaagcc-aataccactaggccaacccaagtgagttta 16436616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 29075862 - 29075781
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||||||||||| || |||||| | ||||||||||  ||||||||| ||||||||||| | ||||||||||||||    
T  29075862 agagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagcc-aataccactaggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 409
Target Start/End: Complemental strand, 16457888 - 16457810
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||| |||||||||||||||||||| | |||||||| | |||||||||| |||||||| || |||||| |||||||||    
T  16457888 gagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagcc-aataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 407
Target Start/End: Original strand, 18595970 - 18596075
Alignment:
Q  301 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccc 400  Q
    |||| |||||||||||||||||    ||||| |||||||| | ||||||||||||| | |||| ||||| ||| |||||| |||||||||||| ||| ||    
T  18595970 taaactaaccccctcaaattggcaccagagaaaatcgaacctaagaccttgaggaggagcacattcccaggtcacaagcc-aataccactagatcaatcc 18596068  T
Q  401 aagtggg 407  Q
    |||||||    
T  18596069 aagtggg 18596075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 383
Target Start/End: Original strand, 2331950 - 2332038
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaa 383  Q
    |||||||||||||| ||| |||||||||  | ||| ||||||| |||||||||||||||| | ||||||||||| |  ||||||||||||    
T  2331950 aagaagttaaattagcccactcaaattga-catagggagaatcaaacatgagaccttgagaaaaaacacactccaagatcccaagccaaa 2332038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 382
Target Start/End: Complemental strand, 25979284 - 25979196
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    |||||| |||||||||||| ||||||||   | |||||||||||||| ||||||||||||||| |  |||||||||  | |||||||||    
T  25979284 aagaagctaaattaaccccatcaaattgacataagagagaatcgaacctgagaccttgaggaggagaacactcccaaattccaagccaa 25979196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 409
Target Start/End: Original strand, 17028258 - 17028340
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||| ||||| ||| ||||||||||||||| | |||||||||| ||||||| || ||||| |||||  |||||||||||||||    
T  17028258 tagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaa-cccaatacaactaggtcaacccaagtgggtt 17028340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 409
Target Start/End: Complemental strand, 19043556 - 19043458
Alignment:
Q  310 cccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||||   ||||||| || |||| |||||| ||||| || |||||||||||| || ||||| | |||| |||||| ||||||||||||||||    
T  19043556 cccctcaaattggcactagagaggattgaacctgagactttgagaaggaacacactcccaagttccaagtc-aatagcactaggccaacccaagtgggtt 19043458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 21589369 - 21589288
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||| ||||||||| |||||| | |||||| | || ||||||| |||||||||| |||||||| || ||||||||||||||||    
T  21589369 agagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagcc-aataccaccaggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 402
Target Start/End: Original strand, 1410657 - 1410728
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 402  Q
    |||||||||||| |||||||| |||||| | ||||||||||| ||||||| | |||||||| ||||||||||||    
T  1410657 agagaatcgaac-tgagacctcgaggaggagcacactcccatatcccaagtc-aataccaccagaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 409
Target Start/End: Original strand, 8278271 - 8278351
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||| |||| ||| ||||| || |||||| | |||||||||| |||||||||| |||||||  |||||||||||||||||||    
T  8278271 gagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagcc-aataccatcagaccaacccaagtgggtt 8278351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 379
Target Start/End: Original strand, 39327053 - 39327137
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagc 379  Q
    |||||| ||||||| ||| | |||||| || || ||||||||||||  | ||||||||||||| | ||||||||||||||||||||    
T  39327053 aagaagctaaattagcccac-caaattagtattggagagaatcgaagctaagaccttgaggaggagcacactcccatgtcccaagc 39327137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 381
Target Start/End: Complemental strand, 84902 - 84851
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcca 381  Q
    ||||||||||| ||||||||||||||| | ||||||||||  ||||||||||    
T  84902 gagaatcgaacttgagaccttgaggaggagcacactcccagatcccaagcca 84851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 411
Target Start/End: Original strand, 87423 - 87501
Alignment:
Q  332 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    ||||| ||| ||||||||||||||| | ||||||||||  | ||||| | ||||||||||| |||||| |||||||||||    
T  87423 gaatcaaacctgagaccttgaggaggagcacactcccagattccaaggc-aataccactaggccaaccgaagtgggttta 87501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 2269186 - 2269253
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaaca 361  Q
    |||||| |||| |||||||||||||||| | | ||||| |||||||  ||||||||||||||| ||||    
T  2269186 aagaagctaaaataaccccctcaaattgttatcagagataatcgaatttgagaccttgaggaggaaca 2269253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 411
Target Start/End: Original strand, 30109308 - 30109386
Alignment:
Q  332 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    ||||||||| ||||||||  ||||| | |||||||||| ||| |||||||| |||||| |  ||||||||||||||||||    
T  30109308 gaatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaa-taccaccaagccaacccaagtgggttta 30109386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 402
Target Start/End: Complemental strand, 41730623 - 41730549
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 402  Q
    |||||||||||||||||| ||||||||| | | |||||||| |||| |||| |  ||||||||||| |||||||||    
T  41730623 agagagaatcgaacatgataccttgaggtggagcacactccaatgttccaa-ctcaataccactaggccaacccaa 41730549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 366
Target Start/End: Complemental strand, 11352063 - 11352025
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactc 366  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  11352063 gagagaatcgaacttgagacattgaggagaaacacactc 11352025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 29692382 - 29692463
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||  ||| |||||| |||||||| | ||||||||||  |||||| |||| |||||| |||||||||||| |||||||    
T  29692382 gagagaattaaacctgagactttgaggaggagcacactcccagatcccaatccaa-taccaccagaccaacccaaatgggttt 29692463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 30000230 - 30000168
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggag 356  Q
    |||||||||||||||||| || |||||||  | ||||||| |||||| |||||||| ||||||    
T  30000230 aagaagttaaattaacccacttaaattggcatcagagagagtcgaacctgagacctcgaggag 30000168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 369
Target Start/End: Complemental strand, 43442277 - 43442235
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactccca 369  Q
    |||||||||||||| ||||||||||||||| | ||||||||||    
T  43442277 agagagaatcgaacctgagaccttgaggaggagcacactccca 43442235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 409
Target Start/End: Original strand, 14495801 - 14495881
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||| ||  |||||||| |||||| | ||||||||||  ||||||| ||| |||||| |||||||||||| ||||||    
T  14495801 gagagaatcaaatctgagacctcgaggaggagcacactcccagatcccaagtcaa-taccaccagaccaacccaaatgggtt 14495881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 402
Target Start/End: Complemental strand, 17155936 - 17155831
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||||||||||| ||| ||||||||||    | |||||||| ||| ||||||||||||||| |   ||||| || ||||||| || |||||||||| |    
T  17155936 aagaagttaaattagcccactcaaattggcagcacagagaatcaaacctgagaccttgaggagga--gcactctcaggtcccaaacc-aataccactaaa 17155840  T
Q  394 ccaacccaa 402  Q
    |||||||||    
T  17155839 ccaacccaa 17155831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 380
Target Start/End: Complemental strand, 31074313 - 31074260
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcc 380  Q
    |||||||||||||| ||||| ||||||||| |||||||||| |  |||||||||    
T  31074313 agagagaatcgaacctgagatcttgaggaggaacacactccaaaatcccaagcc 31074260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 36958115 - 36958199
Alignment:
Q  325 ttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    |||||||||||||||| |||||| | || ||| ||||||||||||  || |||||| ||| |||| | | ||||||||||||||||    
T  36958115 ttagagagaatcgaacctgagacttcgatgaggaacacactcccaaatctcaagcc-aatcccaccatatcaacccaagtgggttt 36958199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 37258328 - 37258401
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcc 367  Q
    |||||| |||| ||||||||||||||||     |||||||||||||| ||| ||||||||||| | ||||||||    
T  37258328 aagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgaaaccttgaggaggagcacactcc 37258401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 409
Target Start/End: Original strand, 892479 - 892550
Alignment:
Q  337 gaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||| ||||||||||||||| |  ||||||  | |||||||||||| ||||||||| ||||||||| ||||||    
T  892479 gaacctgagaccttgaggaggagtacactctgaggtcccaagccaa-taccactaggccaacccaaatgggtt 892550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 40461623 - 40461690
Alignment:
Q  342 tgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||||||||| ||||||| || ||| ||||   |||||||| ||| ||||||||||||||||    
T  40461623 tgagaccttgaggagaagcacactctcaagtctcaag-ttaataccaccagatcaacccaagtgggttt 40461690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 7e-22; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 294 - 411
Target Start/End: Complemental strand, 19322882 - 19322766
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    ||||||||||| ||||| |||||||||||   ||||||||||| |||  |||||||||| ||| | |||||||||| ||||||| || ||||||||||||    
T  19322882 aagaagttaaactaacctcctcaaattggcactagagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaacc-aataccactaga 19322784  T
Q  394 ccaacccaagtgggttta 411  Q
     |||||||||||||||||    
T  19322783 tcaacccaagtgggttta 19322766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 329 - 409
Target Start/End: Original strand, 42327392 - 42327471
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||| ||||||||||||||| | |||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  42327392 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagcc-aataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 330 - 411
Target Start/End: Complemental strand, 29503349 - 29503269
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    ||||||||||| ||||||||||||||| | |||||||||| ||||||| || ||||||||||| ||||||||||||||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaacc-aataccactaggccaacccaagtgggttta 29503269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 42922529 - 42922414
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagacctt-gaggagaaacacactcccatgtcccaagccaaataccactag 392  Q
    |||||| |||| ||||||| |||||||||    |||||||||||||| ||||||||| |||||| | |||||||||| || ||||||||| |||||||||    
T  42922529 aagaagctaaactaaccccatcaaattggcaccagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaa-taccactag 42922431  T
Q  393 accaacccaagtgggtt 409  Q
     ||||||||||||||||    
T  42922430 gccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 13803609 - 13803495
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||||||||||||||  | ||||| |||||||| ||||||||||||||| | |||||||| | ||| |||||| |||| |||||||    
T  13803609 aagaaggtaaactaaccccctcaaattggcatcagagataatcgaacctgagaccttgaggaggagcacactcctaagtctcaagcc-aatatcactaga 13803511  T
Q  394 ccaacccaagtgggtt 409  Q
     |||||||| ||||||    
T  13803510 tcaacccaaatgggtt 13803495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 409
Target Start/End: Original strand, 23052521 - 23052599
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| ||||||||||||||||| |||||||||| |||||||||| |||||||| || |||||| |||||||||    
T  23052521 gagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagcc-aataccaccaggccaacctaagtgggtt 23052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 11062441 - 11062360
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||| ||| ||||||||||||||||| |||||||||| || ||||||| |||| |||||| ||||||||||||||||    
T  11062441 agagagaatcaaacctgagaccttgaggagaagcacactcccaagttccaagcc-aatatcactaggccaacccaagtgggtt 11062360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 411
Target Start/End: Original strand, 4060176 - 4060292
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| ||||||||||||||||     |||||||||||||| ||||| ||||||||||| ||||||| || ||  ||| || |||||||||||     
T  4060176 aagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgagatcttgaggagaagcacactctcaggtttcaaacc-aataccactagg 4060274  T
Q  394 ccaacccaagtgggttta 411  Q
    ||||||||||||||||||    
T  4060275 ccaacccaagtgggttta 4060292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 409
Target Start/End: Complemental strand, 19244216 - 19244109
Alignment:
Q  301 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccc 400  Q
    ||||||| ||| ||||||||||    |||||||||||||| |||||||||| |||| | ||||||| || |||||||| | ||||||| |||||||||||    
T  19244216 taaattagcccactcaaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtc-aataccagtagaccaaccc 19244118  T
Q  401 aagtgggtt 409  Q
    |||||||||    
T  19244117 aagtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 410
Target Start/End: Complemental strand, 37480153 - 37480074
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||| ||||||||||||||| | ||||||| || |||||||||| |||||||| || |||||||||||||||||    
T  37480153 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagcc-aataccaccaggccaacccaagtgggttt 37480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 23140908 - 23140990
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||||||||||||  ||||| |||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||| || |||||    
T  23140908 gagagaatcgaaccagagacattgaggaggaacacacacccatgtcccaagcc-aataccattagaccaacccaaatgagttta 23140990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 23552698 - 23552780
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||||||||||||  ||||| |||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||| || |||||    
T  23552698 gagagaatcgaaccagagacattgaggaggaacacacacccatgtcccaagcc-aataccattagaccaacccaaatgagttta 23552780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 42602634 - 42602552
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    ||||||||| ||| | |||||||||| || | |||||||||| |||||||||| ||||||||||| ||||||||||||||||||    
T  42602634 gagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagcc-aataccactaggccaacccaagtgggttta 42602552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 2750588 - 2750649
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgagga 355  Q
    |||||| |||| |||||||||||||||||   ||||||||||||||||||||||||||||||    
T  2750588 aagaagctaaactaaccccctcaaattggcactagagagaatcgaacatgagaccttgagga 2750649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 391
Target Start/End: Original strand, 30410511 - 30410607
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccacta 391  Q
    |||||| |||| |||||||||||||||||    ||||| ||||||||||||| |||||||||| | |||||||| | |||||||||| ||||||||||    
T  30410511 aagaagctaaactaaccccctcaaattggcaccagagaaaatcgaacatgagtccttgaggaggagcacactcctaggtcccaagcc-aataccacta 30410607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 411
Target Start/End: Original strand, 34041550 - 34041666
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||||||||||||||    |||| ||||| ||| ||||||||||||||| | ||||||| ||  ||| ||| ||| |||||||||     
T  34041550 aagaagctaaactaaccccctcaaattggcaccagagggaatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaa-taccactagg 34041648  T
Q  394 ccaacccaagtgggttta 411  Q
    ||||||||||||||||||    
T  34041649 ccaacccaagtgggttta 34041666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 1729897 - 1729814
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||||||||| ||  | |||||| |||||| | |||||||||| |||||||||||| ||||||||| ||||||||||||||||||    
T  1729897 agagagaatcaaatctaagacctagaggaggagcacactcccaagtcccaagccaa-taccactagcccaacccaagtgggttta 1729814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 410
Target Start/End: Complemental strand, 21213847 - 21213768
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||| ||||||||  ||||| |||||||||||| |||||||||| |||||||| ||||||||||| | ||||||    
T  21213847 gagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagcc-aataccaccagaccaacccatgcgggttt 21213768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 409
Target Start/End: Original strand, 40416359 - 40416466
Alignment:
Q  301 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccc 400  Q
    |||| ||||||| |||||||||    |||||||||||||| ||||||||| ||||| | || ||||||| || ||||| | ||||||||||| |||||||    
T  40416359 taaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtc-aataccactaggccaaccc 40416457  T
Q  401 aagtgggtt 409  Q
    |||||||||    
T  40416458 aagtgggtt 40416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 4438941 - 4439055
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||| |||||||||||   ||| ||||||||||||| |||||||||||| | ||||||| ||  |||||||   ||||||| |||     
T  4438941 aagaagctaaactaaccctctcaaattggtaccagaaagaatcgaacatgcgaccttgaggaggagcacactctcagatcccaag-ttaataccattagg 4439039  T
Q  394 ccaacccaagtgggtt 409  Q
    ||||||||||||||||    
T  4439040 ccaacccaagtgggtt 4439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 11251168 - 11251086
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    |||||||||| ||| ||||||||||||||| | |||||| ||| |||||||||| ||||||||||  |||||| ||||||||||    
T  11251168 agagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagcc-aataccactaagccaacctaagtgggttt 11251086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 410
Target Start/End: Complemental strand, 45026856 - 45026742
Alignment:
Q  295 agaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagac 394  Q
    ||||| |||| |||||||||||||||||    |||||||||| ||||||||||||||||||| | |||||||| | || ||||| | | ||| | |||||    
T  45026856 agaagctaaactaaccccctcaaattggcaccagagagaatcaaacatgagaccttgaggaggagcacactcctaagttccaagtc-attactaatagac 45026758  T
Q  395 caacccaagtgggttt 410  Q
    ||| ||||||||||||    
T  45026757 caaaccaagtgggttt 45026742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 1435144 - 1435064
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||||| ||||||||||||||||| |||||||| |  ||||||||| | ||||||||  ||||||||||||||||    
T  1435144 agagagaatcgaac-tgagaccttgaggagaagcacactcctaaatcccaagcc-agtaccactatgccaacccaagtgggtt 1435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 409
Target Start/End: Original strand, 12994376 - 12994452
Alignment:
Q  332 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||| ||||||||| ||||| | |||||||||| |||||||| ||| ||||||||||||||| |||| |||||    
T  12994376 gaatcgaacttgagaccttaaggaggagcacactcccaggtcccaagtcaa-taccactagaccaactcaagcgggtt 12994452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 16918573 - 16918653
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggt 408  Q
    |||||||||| ||| | ||||||||||||| | ||||||||||  |||||| || ||||||||||| |||||||||||||||    
T  16918573 agagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaacc-aataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 410
Target Start/End: Original strand, 21195670 - 21195753
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||| ||||||||| ||||||||||||||| | |||||||||| || |||||||  ||||||||||  |||||||| |||||||    
T  21195670 tagagggaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcc-tataccactagggcaacccaaatgggttt 21195753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 411
Target Start/End: Original strand, 33569853 - 33569937
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||||||||||||| |||||||| |||||  | |||||| ||| |||| ||||||| ||||||||  |||||||| |||||||||    
T  33569853 agagagaatcgaacctgagacctcgaggaagagcacacttccaagtcctaagccaattaccactaagccaacccatgtgggttta 33569937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 410
Target Start/End: Complemental strand, 39715070 - 39714991
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||| |||||||| |||||| | |||||||||| |||||||| | |||||||| |  |||||||||||||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtc-aataccaccatgccaacccaagtgggttt 39714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 409
Target Start/End: Original strand, 5147657 - 5147755
Alignment:
Q  310 cccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||||||   |||||||||||||   ||||||||||| || | || |||||||  || |||| ||| ||||||||||||||||||||||||||    
T  5147657 cccctcaaattggtgcaagagagaatcgaatccgagaccttgagaaggagcatactcccagatctcaagtcaa-taccactagaccaacccaagtgggtt 5147755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 409
Target Start/End: Complemental strand, 19016109 - 19016031
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||| ||| |||||||| |||||| | |||||||||| ||| |||||||| |||||  |||||||||||||||||||    
T  19016109 gagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaa-taccatcagaccaacccaagtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 4262298 - 4262352
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||||||| ||||||||||||||| | |||||| ||| ||||||||||||    
T  4262298 gagagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaa 4262352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 7799031 - 7799112
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||||  ||||| || |||||| | |||||||||| |||||||||| |||||||| ||  ||||||||||||||||    
T  7799031 gagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagcc-aataccaccaggacaacccaagtgggttt 7799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 411
Target Start/End: Original strand, 17737625 - 17737701
Alignment:
Q  333 aatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||| || |||||||||| |||||||||| || |||||    
T  17737625 aatcgaacatgagaccttgaggaggagcacactcccaagtcacaaacc-aataccacta-accaacccaaatgagttta 17737701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 408
Target Start/End: Original strand, 37755933 - 37756046
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| ||||||| ||| ||||||||||  | |||| || |||||| |||||||| ||| || | |||| ||||| |||||||||| |||||||| |      
T  37755933 aagaagctaaattagcccactcaaattggcatcagagggagtcgaacttgagacctcgagtaggagcacattcccaggtcccaagcc-aataccaccaag 37756031  T
Q  394 ccaacccaagtgggt 408  Q
    |||||||||||||||    
T  37756032 ccaacccaagtgggt 37756046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 411
Target Start/End: Original strand, 12517751 - 12517835
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcca--aataccactagaccaaccc-aagtgggttta 411  Q
    ||||||| ||||||||||||||||||| | || ||||| | |||||||||||  || ||||| |||||||||| |||||||||||    
T  12517751 gagaatcaaacatgagaccttgaggaggagcaaactccaaggtcccaagccaacaacaccaccagaccaacccgaagtgggttta 12517835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 414
Target Start/End: Original strand, 30808644 - 30808728
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtttagag 414  Q
    |||||||||||  ||||||||||||||| | || | || || ||| |||||||| || ||| ||||||||||||||||||||||||    
T  30808644 agagaatcgaaactgagaccttgaggaggagcatattctcaggtctcaagccaa-tatcaccagaccaacccaagtgggtttagag 30808728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 410
Target Start/End: Complemental strand, 14500391 - 14500276
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| || ||||||||||||||    |||||||||||||  |||||||| |||||| | ||||||||||  || |||| |  ||||||||||     
T  14500391 aagaagctaaactatccccctcaaattggcaccagagagaatcgaatctgagacctagaggaggagcacactcccagatctcaag-cttataccactagg 14500293  T
Q  394 ccaacccaagtgggttt 410  Q
    |||| ||||||||||||    
T  14500292 ccaaaccaagtgggttt 14500276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 409
Target Start/End: Complemental strand, 28846766 - 28846691
Alignment:
Q  333 aatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||| |||||| | |||||| | |||||||||| |||||||| ||| |||||||||| ||||| |||||||||    
T  28846766 aatcgaacctgagacatcgaggaggagcacactcccaggtcccaagtcaa-taccactagatcaacctaagtgggtt 28846691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 1156546 - 1156476
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacact 365  Q
    ||||||||||||||  || |||||||||  | ||| ||||||| |||||||||||||||| |||||||||||    
T  1156546 aagaagttaaattactccactcaaattga-catagggagaatcaaacatgagaccttgagaagaaacacact 1156476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 6658464 - 6658425
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacacact 365  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  6658464 tagagagaatcgaacatgagactttgaggagaagcacact 6658425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 410
Target Start/End: Original strand, 29197375 - 29197453
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||||||||| |  ||||| | |||||||||| |||||||| | |||||||| |  |||||||||||||||||    
T  29197375 agaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtc-aataccaccaagccaacccaagtgggttt 29197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 406
Target Start/End: Complemental strand, 32687558 - 32687484
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgg 406  Q
    |||||||||| |||||||| |||||| ||||||||| || ||||||| | || |||||| ||| ||||||||||||    
T  32687558 agaatcgaacctgagacctcgaggaggaacacactctcaagtcccaaactaa-taccacaagaacaacccaagtgg 32687484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 412
Target Start/End: Original strand, 3697398 - 3697478
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtttag 412  Q
    |||||||||||  ||||||||||| || | ||| |||| | |||||||||||| |||||  ||||||||||||||||||||||    
T  3697398 gagaatcgaaccagagaccttgag-aggagcactctccaaggtcccaagccaa-taccatcagaccaacccaagtgggtttag 3697478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 33839259 - 33839305
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaa 377  Q
    ||||| |||| ||||||||||||||| | ||||||||||||||||||    
T  33839259 agaattgaacctgagaccttgaggaggagcacactcccatgtcccaa 33839305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 410
Target Start/End: Original strand, 43963989 - 43964065
Alignment:
Q  332 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||| |||||||||||||||| || | |||||||| | ||||||| ||||  || |||||||||||||||||||||||    
T  43963989 gaatcaaacatgagaccttgag-aggagcacactccaaggtcccaaaccaac-actactagaccaacccaagtgggttt 43964065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 2285264 - 2285336
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcc 367  Q
    |||||||||||||| |||  |||||||| | | || ||||||| |||||||||||||||| | |||||||||||    
T  2285264 aagaagttaaattagcccaatcaaattgatat-agggagaatcaaacatgagaccttgagaaaaaacacactcc 2285336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 410
Target Start/End: Complemental strand, 25931085 - 25931005
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    |||||||||||  |||||| | ||||| |||||||||| || ||||||| || |||||||| || ||||||||| |||||||    
T  25931085 agagaatcgaatctgagacttcgaggataaacacactctcaggtcccaaacc-aataccaccaggccaacccaaatgggttt 25931005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 30359731 - 30359680
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    |||||||||| |||||||||||||||| | |||||||| | ||||||||||||    
T  30359731 gagaatcgaa-atgagaccttgaggaggagcacactccaaggtcccaagccaa 30359680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 31681127 - 31681075
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||||| |||||| |||||||||| |||||||| | ||| ||||||||    
T  31681127 gagaatcgaacctgagactttgaggagaagcacactccaaggtctcaagccaa 31681075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 410
Target Start/End: Original strand, 45672376 - 45672455
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    |||||| |||| |||||||| |||||| |||| ||||| | ||| |||| |||| ||||| || |||||||||||||||||    
T  45672376 gagaattgaacctgagacctagaggaggaacatactccaaggtctcaaggcaaa-accacaaggccaacccaagtgggttt 45672455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 410
Target Start/End: Complemental strand, 46518742 - 46518627
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||||||||||||||  | |||||||||| ||| ||| ||||||||||| | ||||||||||  ||||||||| ||||||||||      
T  46518742 aagaagctaaactaaccccctcaaattggcatcagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagcc-aataccactatg 46518644  T
Q  394 ccaacccaagtgggttt 410  Q
    |||||||||||||||||    
T  46518643 ccaacccaagtgggttt 46518627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 10445101 - 10445216
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| ||||||| ||| |||||||| |    |||||||||||||| |||||||| |||||| | |||||||||| |||||||||||| | |||||||     
T  10445101 aagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccactagg 10445200  T
Q  394 ccaacccaagtgggtt 409  Q
    ||||||||||||||||    
T  10445201 ccaacccaagtgggtt 10445216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 411
Target Start/End: Complemental strand, 30311420 - 30311304
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||||||||||||||    | |||||||||||| ||||||||||||||| | ||||||||||  |||||||||  ||||||||||     
T  30311420 aagaagctaaactaaccccctcaaattggcaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcc-tataccactagg 30311322  T
Q  394 ccaacccaagtgggttta 411  Q
    |||||||| |||||||||    
T  30311321 ccaacccaggtgggttta 30311304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 411
Target Start/End: Complemental strand, 36720463 - 36720379
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    ||||||||||||||| ||| |||| |||||| | ||||||||||| ||||||||| |||||||| |||||||||||||||||||||    
T  36720463 tagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagcc-aataccaccagaccaacccaagtgggttta 36720379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 406
Target Start/End: Complemental strand, 53413052 - 53412948
Alignment:
Q  301 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccc 400  Q
    |||| |||||||||||||||||    ||||||||| |||| ||||||||||||||| | |||||||||| ||  |||||| |||||||||||||||||||    
T  53413052 taaactaaccccctcaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagcc-aataccactagaccaaccc 53412954  T
Q  401 aagtgg 406  Q
    ||||||    
T  53412953 aagtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 27093356 - 27093438
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    |||||||||| ||| ||||||||||||||| | |||||||||| || ||||||| ||||||||||| |||||||||||||||||    
T  27093356 agagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagcc-aataccactaggccaacccaagtgggttt 27093438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 37788428 - 37788541
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||||||||||| |||||||||   ||||||||||||||| ||||||||||||||| | |||||||| | || ||||| | ||||||||| |     
T  37788428 aagaagctaaattaacccc-tcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtc-aataccactggg 37788525  T
Q  394 ccaacccaagtgggtt 409  Q
    ||||||||||||||||    
T  37788526 ccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 410
Target Start/End: Original strand, 15048023 - 15048138
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    ||||||||||| |||||||||||||||||    ||||| |||||||| ||||||||||||||| | |||| |||||  |||||||||  |||||| ||      
T  15048023 aagaagttaaactaaccccctcaaattggcaccagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcc-tataccattaag 15048121  T
Q  394 ccaacccaagtgggttt 410  Q
    |||||||||||||||||    
T  15048122 ccaacccaagtgggttt 15048138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 28703366 - 28703480
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| ||||| |||||||||||    |||||||||||||| ||||||||||| ||| | ||||||||||  ||||||| | |||| |||| ||    
T  28703366 aagaagctaaactaacctcctcaaattggcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaag-ctaatatcactgga 28703464  T
Q  394 ccaacccaagtgggtt 409  Q
    ||||||||||||||||    
T  28703465 ccaacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 16354887 - 16354968
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||||| ||||||| ||||||| | ||||||| || || ||||||| ||||||||||| ||||||||||||||||    
T  16354887 agagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagcc-aataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 413
Target Start/End: Complemental strand, 8051290 - 8051210
Alignment:
Q  332 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtttaga 413  Q
    ||||||||| |||||||| |||||||| || ||| ||| |||||||||| |||||||| || ||||||||||||||||||||    
T  8051290 gaatcgaacttgagacctcgaggagaagcatactgccaggtcccaagcc-aataccaccaggccaacccaagtgggtttaga 8051210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 14186727 - 14186648
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||||| ||||||||||||||| | |||||| ||| |||||||| | ||||||||||| ||||||||||||||||    
T  14186727 gagagaatcgaacctgagaccttgaggaggagcacact-ccaggtcccaagac-aataccactaggccaacccaagtgggtt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 37051256 - 37051370
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||| |||| |||||||||||||| |||   |||||||||||||| |||||| || ||||| ||||||||||||  ||||||  | |||| ||||| |    
T  37051256 aagaagctaaactaaccccctcaaatcggtgcaagagagaatcgaacctgagactttaaggaggaacacactcccagatcccaaatc-aatatcactaaa 37051354  T
Q  394 ccaacccaagtgggtt 409  Q
     |||||||||||||||    
T  37051355 tcaacccaagtgggtt 37051370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 4222222 - 4222141
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||||| | |||| |||||||| | ||||||||||  ||||||||| ||||||||||  ||||||||||||||||    
T  4222222 agagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagcc-aataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 411
Target Start/End: Original strand, 32651432 - 32651515
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttta 411  Q
    ||||||||||||||  ||||| ||||||||| | |||||||||| |||||||||| ||||||||||| |||| | |||||||||||    
T  32651432 tagagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagcc-aataccactaggccaa-ctaagtgggttta 32651515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 367
Target Start/End: Complemental strand, 33464576 - 33464504
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcc 367  Q
    |||||||||||||| ||| ||||||||| | | || ||||||| |||||||||||||||| |||||||||||||    
T  33464576 aagaagttaaattagcccactcaaattgatat-agggagaatcaaacatgagaccttgagaagaaacacactcc 33464504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 397
Target Start/End: Original strand, 37504341 - 37504440
Alignment:
Q  297 aagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagacca 396  Q
    ||||||||||| ||| ||||||||||| | ||||| |||||||| | ||||||| |||||| ||| ||||||| ||  |||||| ||||||||||| |||    
T  37504341 aagttaaattagcccactcaaattggtttcagagataatcgaacctcagaccttaaggagagacatactcccaagtttcaagcc-aataccactaggcca 37504439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 8796088 - 8796168
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||||||| ||||||||||||||| | || ||||||| | |||  ||  ||||||||||| ||||||||||||||||    
T  8796088 agagagaatcgaacttgagaccttgaggaggagcatactcccaagcccccggc--aataccactaggccaacccaagtgggtt 8796168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 26505323 - 26505437
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    ||||||||||| ||||||||| ||||||||   |||||||||  ||| | ||| ||||| ||| | |||||| |||| |||||||||  |||||||| ||    
T  26505323 aagaagttaaactaaccccctgaaattggtaccagagagaattcaacctcagatcttgaagaggagcacacttccatatcccaagcc-tataccactgga 26505421  T
Q  394 ccaacccaagtgggtt 409  Q
    |||| |||||||||||    
T  26505422 ccaatccaagtgggtt 26505437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 408
Target Start/End: Original strand, 47454615 - 47454692
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggt 408  Q
    ||||||||||| |||||||| |||||| | |||||||| |  || |||||||| |||||||||| ||||||||||||||    
T  47454615 gagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaa-taccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 409
Target Start/End: Original strand, 27923043 - 27923119
Alignment:
Q  332 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||| ||||||  ||||||| | |||||| |||||||||||||| |||||||| || |||||| |||||||||    
T  27923043 gaatcgaacctgagactatgaggaggagcacacttccatgtcccaagcc-aataccaccaggccaacctaagtgggtt 27923119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 409
Target Start/End: Original strand, 47810740 - 47810820
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||| |||  ||||||||| |||| | |||||||||| | || ||||||| |||||| |||||||||||||||||||    
T  47810740 gagagaatcaaacccgagaccttgcggaggagcacactcccaagaccaaagccaa-taccaccagaccaacccaagtgggtt 47810820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 402
Target Start/End: Original strand, 8075121 - 8075196
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 402  Q
    ||||| ||||||||| ||| ||||||||||| | |||||||||| ||||||||||  ||||||||||  ||||||||    
T  8075121 tagagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcc-tataccactagggcaacccaa 8075196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 409
Target Start/End: Complemental strand, 8170747 - 8170672
Alignment:
Q  333 aatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||| |||||||||||| || | |||||||||| ||  |||||| ||||||||||| ||||||||| ||||||    
T  8170747 aatcgaacctgagaccttgagtaggagcacactcccaagtttcaagcc-aataccactaggccaacccaaatgggtt 8170672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 16900679 - 16900731
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||||||||||||||||| ||| | |||||||| | ||||||||||||    
T  16900679 gagaatcgaacatgagaccttgacgaggagcacactccaaggtcccaagccaa 16900731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 27259263 - 27259187
Alignment:
Q  306 taaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||||||||||   | |||||||||| ||| ||| |||| |||||| | |||||||||| ||||||||||||    
T  27259263 taaccccctcaaattgacatcagagagaatcaaacctgaaacctcgaggaggagcacactcccaggtcccaagccaa 27259187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 409
Target Start/End: Complemental strand, 14339688 - 14339610
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| |||||| |||||||| | ||||||||||  ||||||||| |||||||| || |||| |||| ||||||    
T  14339688 gagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagcc-aataccaccaggccaatccaactgggtt 14339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 381
Target Start/End: Original strand, 44743817 - 44743904
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcca 381  Q
    |||||| ||||||||||| | ||||||||   | |||| |||||||| |||||||| |||||| | ||||||||||  ||||||||||    
T  44743817 aagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 44743904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 402
Target Start/End: Original strand, 4844507 - 4844580
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 402  Q
    ||||||||||| | |||||||| |||||| | ||||||||||  ||||||| | |||||||| ||||||||||||    
T  4844507 gagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtc-aataccaccagaccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 402
Target Start/End: Original strand, 4870203 - 4870276
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 402  Q
    ||||||||||| | |||||||| |||||| | ||||||||||  ||||||| | |||||||| ||||||||||||    
T  4870203 gagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtc-aataccaccagaccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 10499105 - 10499186
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||||| ||||||||  ||||  | || |||||||  ||||||||||| |||||| || |||||||||||||||||    
T  10499105 gagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaa-taccaccaggccaacccaagtgggttt 10499186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 31520601 - 31520682
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||| ||| | |||||| |||||| | ||||||||||  ||||||||| ||| |||| || |||||||||||||||||    
T  31520601 gagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagcc-aatgccaccaggccaacccaagtgggttt 31520682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 409
Target Start/End: Complemental strand, 40063720 - 40063619
Alignment:
Q  307 aaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgg 406  Q
    ||||||||||||||||   | ||||||||||||| ||||||||| ||||| | || |||| ||  ||||||||| ||||| ||||   ||||||||||||    
T  40063720 aaccccctcaaattggcactggagagaatcgaacttgagaccttaaggaggagcatactctcagatcccaagcc-aatactactaagtcaacccaagtgg 40063622  T
Q  407 gtt 409  Q
    |||    
T  40063621 gtt 40063619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 407
Target Start/End: Original strand, 10682942 - 10683017
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtggg 407  Q
    |||||| |||| |||||| ||||| |||| |||||||| | ||| |||||||| |||||||||| |||||||||||||    
T  10682942 gagaattgaacctgagactttgag-agaagcacactccaaggtctcaagccaa-taccactagatcaacccaagtggg 10683017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 410
Target Start/End: Complemental strand, 19154710 - 19154630
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    |||||||||||| ||||||||| ||||| | ||||||| || | | |||||| ||||| ||||| ||||||||| |||||||    
T  19154710 agagaatcgaacctgagacctttaggaggagcacactctcaggcctcaagcc-aatacaactaggccaacccaaatgggttt 19154630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 21960631 - 21960551
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||||  |||||||| |||||| | ||||||| || |||||||||| |||||||| ||  |||||||| ||||||    
T  21960631 gagagaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagcc-aataccaccagcgcaacccaattgggtt 21960551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 411
Target Start/End: Original strand, 34622571 - 34622600
Alignment:
Q  382 aataccactagaccaacccaagtgggttta 411  Q
    ||||||||||||||||||||||||||||||    
T  34622571 aataccactagaccaacccaagtgggttta 34622600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 36010823 - 36010778
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgt 372  Q
    |||||||||||||| |||||| |||||||| | |||||||||||||    
T  36010823 agagagaatcgaacttgagactttgaggaggagcacactcccatgt 36010778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 410
Target Start/End: Original strand, 49397542 - 49397618
Alignment:
Q  333 aatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggttt 410  Q
    ||||||||||||||||| |||||||| |||||||||| | |  || || |||| ||| | ||||||||||||||||||    
T  49397542 aatcgaacatgagacctcgaggagaagcacactcccaagccataaacc-aatatcaccaaaccaacccaagtgggttt 49397618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 409
Target Start/End: Original strand, 2597217 - 2597296
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||| |||||| ||||||||  ||||| | |||||||| |  ||| ||||||| |||||| |||||||||||||||||||    
T  2597217 agagattcgaacctgagacctcaaggaggagcacactcctaaatccgaagccaa-taccaccagaccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 402
Target Start/End: Complemental strand, 2667944 - 2667869
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 402  Q
    |||||| |||||||| |||||||| |||||  | ||||||||||  ||||||||| |||||||| || |||||||||    
T  2667944 tagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagcc-aataccaccaggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 409
Target Start/End: Complemental strand, 3055065 - 3054994
Alignment:
Q  337 gaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||| ||||| ||||||||||| ||| |||| | |||||||||| || ||||| || ||||||||||||||||    
T  3055065 gaacctgagatcttgaggagaagcacgctccaaggtcccaagcc-aacaccaccaggccaacccaagtgggtt 3054994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 369
Target Start/End: Original strand, 3427534 - 3427590
Alignment:
Q  313 ctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactccca 369  Q
    ||||||||||   ||||||||||||||  ||||||||||||||| | ||||||||||    
T  3427534 ctcaaattggcactagagagaatcgaatctgagaccttgaggaggagcacactccca 3427590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 401
Target Start/End: Complemental strand, 12761587 - 12761520
Alignment:
Q  333 aatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccca 401  Q
    |||||||| ||||| ||  ||||| |||||||||||| |||||||| | |||||||| |||||||||||    
T  12761587 aatcgaacctgagagctcaaggaggaacacactcccaggtcccaagtc-aataccaccagaccaaccca 12761520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 40777094 - 40777014
Alignment:
Q  326 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| ||| ||||||||||| ||| | |||||||| |||||||| ||  || ||||| ||| |||||||||||||||    
T  40777094 tagagagaatcaaacctgagaccttga-gaggagcacactccaatgtcccatgc--aacaccaccagatcaacccaagtgggtt 40777014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 47236969 - 47237021
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||||||||||||||||| ||| | |||||||||  ||||||| ||||    
T  47236969 gagaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaa 47237021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 54990780 - 54990728
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||||| ||||||||||||||| | ||| |||| | ||||||||||||    
T  54990780 gagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaa 54990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 409
Target Start/End: Original strand, 15319 - 15399
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||||| |||||||| |||||| | |||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  15319 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagcc-aataccaccagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 406
Target Start/End: Original strand, 94966 - 95044
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgg 406  Q
    ||||| ||| |||| ||||||||||||||| | |||||||||| || ||||||| ||||||||||| |||||||||||||    
T  94966 agagataattgaacctgagaccttgaggaggagcacactcccaggttccaagcc-aataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 367
Target Start/End: Complemental strand, 16664 - 16592
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcc 367  Q
    |||||||||||||| ||| ||||||||| | | || ||||||| |||||||||||||||| |||||||||||||    
T  16664 aagaagttaaattagcccactcaaattgatat-agggagaatcaaacatgagaccttgagaagaaacacactcc 16592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 409
Target Start/End: Original strand, 6631 - 6710
Alignment:
Q  329 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||||  ||||| |||||||| |||||||||||| |||| || || |||||||||||| ||||| |||||||||    
T  6631 agagaatcgaacccgagactttgaggaggaacacactcccaagtcctaaacc-aataccactagatcaacctaagtgggtt 6710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 24167 - 24053
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    |||||||||||||| ||| ||||||||||  | ||||| |||||||| ||| || | || ||| | |||||||| | |||||||| | ||||||| |||     
T  24167 aagaagttaaattagcccactcaaattggcatcagagataatcgaacctgacacttcgaagaggagcacactcctaagtcccaagtc-aataccattagg 24069  T
Q  394 ccaacccaagtgggtt 409  Q
    ||||||||||||||||    
T  24068 ccaacccaagtgggtt 24053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 398
Target Start/End: Original strand, 19957 - 20027
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaac 398  Q
    |||||||||||||| ||||||||||||||| | || ||||||| || ||||||| ||||||||||| |||||    
T  19957 agagagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagcc-aataccactaggccaac 20027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 405
Target Start/End: Original strand, 81526 - 81636
Alignment:
Q  294 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 393  Q
    ||||||||||| |||| ||||||||||||  | || ||||||||||  ||||||||||||||| | |||||| |||  | |||| || |||| |||||||    
T  81526 aagaagttaaactaactccctcaaattggcatcagggagaatcgaatctgagaccttgaggaggagcacacttccagattccaaacc-aatatcactaga 81624  T
Q  394 ccaacccaagtg 405  Q
    |||||| |||||    
T  81625 ccaaccaaagtg 81636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 43332 - 43382
Alignment:
Q  332 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||||||||||||| || || |||||||||||| ||||||||||||    
T  43332 gaatcgaacatgagaccttaagaaggaacacactcccaagtcccaagccaa 43382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 403
Target Start/End: Complemental strand, 11609 - 11534
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaag 403  Q
    |||||||||||||| |||||||| |||||| | ||||||||||  ||||||||| |||||||| || ||| ||||||    
T  11609 agagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagcc-aataccaccaggccatcccaag 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 399
Target Start/End: Original strand, 25342 - 25413
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacc 399  Q
    ||||| |||||||| |||||||||||| || | |||||||||| ||| |||||| ||||||||||||| ||||    
T  25342 agagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagcc-aataccactagacgaacc 25413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 6921 - 6988
Alignment:
Q  334 atcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 402  Q
    ||||||| |||||| |||||||| | |||||||||  |||||||||| ||||||||||| |||||||||    
T  6921 atcgaacctgagactttgaggaggagcacactccccagtcccaagcc-aataccactaggccaacccaa 6988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 409
Target Start/End: Original strand, 2468 - 2546
Alignment:
Q  330 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||||| ||||||||||||||| | ||||||||||  ||| || || ||||||||  ||||||||||| ||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaacc-aataccaccggaccaacccaaatgggtt 2546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 378
Target Start/End: Original strand, 45754 - 45805
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaag 378  Q
    |||||||||||||||||||||||  ||||| |||||||||| | ||||||||    
T  45754 agagagaatcgaacatgagacctcaaggaggaacacactcctaggtcccaag 45805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 409
Target Start/End: Original strand, 7725 - 7802
Alignment:
Q  331 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    |||||||||| ||||||||| ||||| | ||||||  || ||| |||||||| |||||| |||||||||||||| ||||    
T  7725 agaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaa-taccaccagaccaacccaagttggtt 7802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 13042 - 13096
Alignment:
Q  328 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 382  Q
    ||||||||||||| ||||||||||||||| | ||||||||||  || ||||||||    
T  13042 gagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaa 13096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 41628 - 41709
Alignment:
Q  327 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgggtt 409  Q
    ||||||||| |||| |||||||| |||||| | || |||| ||  || |||||||| ||||||||| ||||||||||||||||    
T  41628 agagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaa-taccactaggccaacccaagtgggtt 41709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 3145 times since January 2019
Visitors: 6169