View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0830_high_5 (Length: 724)

Name: NF0830_high_5
Description: NF0830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0830_high_5
NF0830_high_5
[»] chr8 (21 HSPs)
chr8 (302-695)||(14168331-14168727)
chr8 (6-294)||(14168004-14168301)
chr8 (129-227)||(44319583-44319681)
chr8 (129-207)||(24017772-24017850)
chr8 (140-214)||(27502902-27502976)
chr8 (129-210)||(36058776-36058857)
chr8 (140-220)||(10934668-10934748)
chr8 (136-211)||(92762-92837)
chr8 (129-194)||(18603512-18603577)
chr8 (143-208)||(41753765-41753830)
chr8 (129-201)||(11295718-11295790)
chr8 (140-215)||(1897858-1897933)
chr8 (140-223)||(7484682-7484765)
chr8 (141-208)||(33385178-33385245)
chr8 (129-223)||(3225834-3225928)
chr8 (140-202)||(9930941-9931003)
chr8 (146-208)||(13964426-13964488)
chr8 (129-186)||(2805842-2805899)
chr8 (140-169)||(7258631-7258660)
chr8 (129-202)||(10815500-10815573)
chr8 (140-169)||(36916648-36916677)
[»] chr4 (22 HSPs)
chr4 (129-220)||(6974987-6975078)
chr4 (129-211)||(50686009-50686091)
chr4 (129-223)||(4406233-4406327)
chr4 (141-215)||(40575839-40575913)
chr4 (136-214)||(2582809-2582887)
chr4 (130-208)||(24798182-24798260)
chr4 (140-213)||(16170975-16171048)
chr4 (141-214)||(25022519-25022592)
chr4 (140-208)||(55416363-55416432)
chr4 (129-201)||(23003976-23004048)
chr4 (129-221)||(33036918-33037010)
chr4 (140-208)||(40814734-40814802)
chr4 (140-208)||(52914063-52914131)
chr4 (140-215)||(36786215-36786290)
chr4 (140-223)||(39533821-39533904)
chr4 (141-208)||(41654507-41654574)
chr4 (127-213)||(40952350-40952436)
chr4 (146-215)||(2253954-2254023)
chr4 (129-178)||(4708573-4708622)
chr4 (140-213)||(8826867-8826940)
chr4 (129-221)||(21224739-21224832)
chr4 (129-194)||(39235158-39235223)
[»] chr3 (21 HSPs)
chr3 (129-208)||(37897736-37897815)
chr3 (140-220)||(331794-331873)
chr3 (140-220)||(48191710-48191790)
chr3 (140-208)||(54783384-54783452)
chr3 (141-220)||(27224575-27224654)
chr3 (129-220)||(52215934-52216025)
chr3 (145-211)||(40639865-40639931)
chr3 (144-208)||(20625246-20625310)
chr3 (140-208)||(37807517-37807585)
chr3 (147-215)||(40639781-40639849)
chr3 (129-202)||(51253683-51253756)
chr3 (140-208)||(12744966-12745034)
chr3 (141-213)||(41253933-41254005)
chr3 (140-208)||(54595797-54595865)
chr3 (141-208)||(24722694-24722761)
chr3 (140-207)||(42929071-42929138)
chr3 (140-194)||(52866438-52866492)
chr3 (140-202)||(53638456-53638518)
chr3 (140-221)||(22496945-22497026)
chr3 (140-221)||(45736681-45736762)
chr3 (129-202)||(51060717-51060790)
[»] chr2 (17 HSPs)
chr2 (140-222)||(38465782-38465864)
chr2 (140-223)||(11093522-11093605)
chr2 (139-213)||(37182880-37182954)
chr2 (140-221)||(15119771-15119852)
chr2 (140-221)||(21183392-21183473)
chr2 (140-208)||(596092-596160)
chr2 (140-208)||(1961374-1961442)
chr2 (144-215)||(7079370-7079441)
chr2 (140-223)||(31024163-31024246)
chr2 (141-215)||(3121422-3121496)
chr2 (141-213)||(15859553-15859625)
chr2 (140-208)||(32630471-32630539)
chr2 (140-202)||(10602307-10602369)
chr2 (132-194)||(18479342-18479404)
chr2 (129-202)||(15916746-15916819)
chr2 (146-223)||(32308330-32308407)
chr2 (129-202)||(36547354-36547427)
[»] chr1 (14 HSPs)
chr1 (140-202)||(3549844-3549906)
chr1 (129-215)||(50550173-50550259)
chr1 (140-207)||(14885327-14885394)
chr1 (140-207)||(14885485-14885552)
chr1 (140-208)||(34953903-34953971)
chr1 (129-201)||(41007691-41007763)
chr1 (129-200)||(14967240-14967311)
chr1 (140-202)||(33765852-33765914)
chr1 (129-202)||(50503237-50503310)
chr1 (129-201)||(39362863-39362935)
chr1 (131-221)||(48083498-48083588)
chr1 (129-214)||(9590745-9590830)
chr1 (130-195)||(35544553-35544618)
chr1 (140-221)||(41161530-41161611)
[»] chr7 (10 HSPs)
chr7 (140-206)||(30138797-30138863)
chr7 (140-221)||(7295121-7295202)
chr7 (140-221)||(25245208-25245289)
chr7 (140-220)||(10095714-10095794)
chr7 (140-226)||(6455614-6455700)
chr7 (129-202)||(21586827-21586900)
chr7 (140-208)||(2943219-2943287)
chr7 (140-208)||(31115674-31115742)
chr7 (129-208)||(26385632-26385711)
chr7 (140-201)||(26904846-26904907)
[»] chr5 (11 HSPs)
chr5 (128-210)||(694259-694341)
chr5 (141-202)||(7505162-7505223)
chr5 (141-213)||(4297263-4297335)
chr5 (141-221)||(10437703-10437783)
chr5 (145-222)||(18652835-18652912)
chr5 (129-209)||(3100411-3100491)
chr5 (140-214)||(8681750-8681824)
chr5 (140-202)||(28518787-28518849)
chr5 (141-194)||(13710356-13710409)
chr5 (147-220)||(32198855-32198928)
chr5 (140-213)||(36897744-36897817)
[»] scaffold0009 (2 HSPs)
scaffold0009 (140-208)||(216338-216406)
scaffold0009 (140-215)||(145968-146043)
[»] scaffold0149 (1 HSPs)
scaffold0149 (140-215)||(24671-24746)
[»] chr6 (16 HSPs)
chr6 (140-215)||(26527255-26527330)
chr6 (140-194)||(31158864-31158918)
chr6 (142-222)||(10258297-10258377)
chr6 (140-220)||(12383782-12383862)
chr6 (140-208)||(34379800-34379868)
chr6 (146-213)||(8449576-8449643)
chr6 (146-213)||(8458380-8458447)
chr6 (129-220)||(29072063-29072154)
chr6 (129-220)||(29104636-29104727)
chr6 (140-202)||(15517155-15517217)
chr6 (139-221)||(18886302-18886384)
chr6 (140-202)||(20704036-20704098)
chr6 (141-223)||(31996565-31996647)
chr6 (146-208)||(34170085-34170147)
chr6 (140-209)||(3102203-3102272)
chr6 (141-202)||(34313553-34313614)
[»] scaffold0113 (1 HSPs)
scaffold0113 (130-208)||(40460-40538)
[»] scaffold0036 (1 HSPs)
scaffold0036 (129-211)||(89602-89684)


Alignment Details
Target: chr8 (Bit Score: 346; Significance: 0; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 302 - 695
Target Start/End: Original strand, 14168331 - 14168727
Alignment:
Q  302 gtcggcggtgagtcattgggaccagactcaaatcatcaagtagaccaaaaaggtacgttaacccataggagacattcgataaaattagaaccaaagactt 401  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14168331 gtcggcggtgagtcattgggaccagactcaaatcatcatgtagaccaaaaaggtacgttaatccataggagacattcgataaaattagaaccaaagactt 14168430  T
Q  402 aaacatatttagacggtgagacattttatagttgttgatgagtcatcaagacgggaactcaatgaactcaaatcatgtagacaaaaaatgcattttgtct 501  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14168431 aaacatatttagacggtgagacattttatagttgctgatgagccatcaagacgggaactctatgaactcaaatcatgtagacaaaaaatgcattttgtct 14168530  T
Q  502 ctaaactccctttaaacggtgaaatgttctccaatacgacgagtcatcggaattgaaatcggaactcaactcacgtaaacttttctcatgatagaattgt 601  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14168531 ctaaactccttttaaacggtgaaatgttctccaatacgacgagtcatcagaattgaaatcgggactcaactcacgtaaacttttctcatgatagaattgt 14168630  T
Q  602 gcaattattttgagaaagtgataaagattgaaaattctatatatgctctaaattaac--ttttttatcactatggtccaattc-atgcattggaaat 695  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||    
T  14168631 gcaattattttgagaaagtgataaagattgaaaattctatatatgctctaaattaacttttttttatcactatggtccaattcaatgcattggaaat 14168727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 6 - 294
Target Start/End: Original strand, 14168004 - 14168301
Alignment:
Q  6 aggagcagagagggtagccatagttcaatatgtattgtctatagtgctaagtaagaaaatgtgatgaagaaatctaagtctatggctcttctatttataa 105  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14168004 aggagcagaaagggtagccatagttcaatatgtattgtttatagtgctaagtaagaaaatgtgatgaagaaatctaagtctatggctcttctatttataa 14168103  T
Q  106 t-----------aaaaatgaatacata-atcatatatgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttt 193  Q
    |           ||||||||||||||| |||  |||||||| |||||||| | |||||||| |||||| |||||||||||||||||||||||||||||||    
T  14168104 tactatgaaaacaaaaatgaatacatacatc--atatgtatatgacctttttcatagaccagatacatcatttaattaattaattcaaaatgtttatttt 14168201  T
Q  194 tgtttataaaagtgatcggaggttgtatttgt-ttgtacgtgacatccgataaaatcaaaacgcggtataaagaaataaatgtatcttgggaaagtgaaa 292  Q
    ||||||| ||||||| | |||| |||||||||  |||| |||||||||||||||| |||||  ||||||||||||||||||||||| | ||||||| |||    
T  14168202 tgtttattaaagtgaccagagggtgtatttgtcctgtaagtgacatccgataaaaccaaaa--cggtataaagaaataaatgtatccttggaaagtaaaa 14168299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 44319583 - 44319681
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtatttgttt 227  Q
    |||||||||  ||||||||||||| |||||||| ||||||| ||||| |  ||||| || ||||||| |||||| |||||||||| | |||||||||||    
T  44319583 atgtatgtggtctttattatagactacatacatcatttaataaattattctaaaatattaatttttgcttataatagtgatcggatggtgtatttgttt 44319681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 24017772 - 24017850
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtg 207  Q
    |||||| ||| |||||||| ||||||||||||| ||||||||||| |||  |||||||| ||||||| |||||| ||||    
T  24017772 atgtatatgatctttattacagaccacatacatcatttaattaataaatctaaaatgttgatttttgcttataatagtg 24017850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 27502976 - 27502902
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggag 214  Q
    |||||||||| | ||||||||| ||||||| ||| |||| |||||||| ||||||| |||||| |||||||||||    
T  27502976 ctttattataaatcacatacatcatttaatgaatgaatttaaaatgttaatttttgcttataatagtgatcggag 27502902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 36058857 - 36058776
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatc 210  Q
    |||||| ||| |||||||||||| ||||||| ||||||||| ||| |||  |||||||| | |||||||||||| |||||||    
T  36058857 atgtatttgatctttattatagatcacatactttatttaataaataaatctaaaatgttaaattttgtttataatagtgatc 36058776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 10934668 - 10934748
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgta 220  Q
    ||||||| |||||||||||||| ||||||| ||| |||  |||||||| ||||||| |||||| ||||| |||||| ||||    
T  10934668 ctttattgtagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccggagggtgta 10934748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 92837 - 92762
Alignment:
Q  136 tgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcg 211  Q
    ||||||| ||||||||| |||||||||||| ||| ||| |||  ||| |||| |||||||||||||| ||||||||    
T  92837 tgaccttcattatagactacatacattattaaatgaatgaatctaaattgttgatttttgtttataatagtgatcg 92762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 18603512 - 18603577
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttattttt 194  Q
    |||||| ||| |||||||||| ||||||||||| ||||||||||| |||  |||||||| ||||||    
T  18603512 atgtatatgatctttattatataccacatacatcatttaattaataaatctaaaatgttaattttt 18603577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 41753830 - 41753765
Alignment:
Q  143 tattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    ||||||||||||||||||| ||||||| ||| |||| |||||||| | ||||| |||||| |||||    
T  41753830 tattatagaccacatacatcatttaatgaatgaatttaaaatgttgaattttgcttataatagtga 41753765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 11295718 - 11295790
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttata 201  Q
    |||||||||  |||||||||| ||||||| ||| ||||||| ||| |||  |||||||| |||||||||||||    
T  11295718 atgtatgtggtctttattataaaccacatgcatcatttaatgaatgaatctaaaatgttaatttttgtttata 11295790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 1897933 - 1897858
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggagg 215  Q
    ||||||||||||| |||||||||||||||| ||| |||  ||||| || ||||||| |||||| | ||| ||||||    
T  1897933 ctttattatagacaacatacattatttaatgaataaatataaaatattgatttttgcttataataatgaccggagg 1897858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 7484682 - 7484765
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtattt 223  Q
    ||||||||| |||||||||||| ||||||| ||| |||  |||||||| ||||||| |||||| | ||| || ||| |||||||    
T  7484682 ctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataataatgaccgtagggtgtattt 7484765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 33385245 - 33385178
Alignment:
Q  141 tttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    ||||||||||||||||||||| ||||||  ||| |||  |||||||| |||||| ||||||| |||||    
T  33385245 tttattatagaccacatacatcatttaaaaaataaatctaaaatgttaatttttatttataatagtga 33385178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 3225834 - 3225928
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtattt 223  Q
    |||||| ||| |||||||||||||||||||||| ||||||| ||| ||   ||||| || ||||||| |||||| | |||| ||| | |||||||    
T  3225834 atgtatatgatctttattatagaccacatacatcatttaatgaatgaaccaaaaatattgatttttgcttataataatgattggatggtgtattt 3225928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 9930941 - 9931003
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    ||||||||||||| | |||||| || |||||||| |||  ||||| |||||||||||||||||    
T  9930941 ctttattatagactatatacatcatctaattaatgaatctaaaatatttatttttgtttataa 9931003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 13964488 - 13964426
Alignment:
Q  146 tatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||||||||||||| ||||| | ||| |||| |||||||| ||||||| |||||| |||||    
T  13964488 tatagaccacatacatcatttattgaatgaatttaaaatgttgatttttgcttataatagtga 13964426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 2805899 - 2805842
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgt 186  Q
    |||||| ||| ||||||||||||||||||| || ||||||| ||| ||| ||||||||    
T  2805899 atgtatatgatctttattatagaccacatatatcatttaataaatgaatccaaaatgt 2805842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 7258660 - 7258631
Alignment:
Q  140 ctttattatagaccacatacattatttaat 169  Q
    ||||||||||||||||||||||||||||||    
T  7258660 ctttattatagaccacatacattatttaat 7258631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 10815500 - 10815573
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    |||||| ||| |||||||||| |||||||||||| |||||||||| |||   |||| || ||||||| ||||||    
T  10815500 atgtatatgaactttattataaaccacatacattttttaattaatgaatctcaaatattgatttttgcttataa 10815573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 36916648 - 36916677
Alignment:
Q  140 ctttattatagaccacatacattatttaat 169  Q
    ||||||||||||||||||||||||||||||    
T  36916648 ctttattatagaccacatacattatttaat 36916677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 6974987 - 6975078
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgta 220  Q
    |||||| ||| ||||||||||||| |||||||| ||| ||| ||| ||||||||||||| ||||||| |||||| ||||| |||||| ||||    
T  6974987 atgtatttgatctttattatagactacatacatcattaaatgaatgaattcaaaatgttgatttttgcttataatagtgaccggaggatgta 6975078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 50686091 - 50686009
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcg 211  Q
    |||||| ||| |||||||||||| ||||||||||||||||| ||| |||| |||||  | |||||||||||||| ||||||||    
T  50686091 atgtatatgatctttattatagatcacatacattatttaataaatgaatttaaaatactaatttttgtttataacagtgatcg 50686009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 4406327 - 4406233
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtattt 223  Q
    |||||||||  |||||||||||||||||||||| ||||||| ||| |||  |||||||| ||||||  |||||| ||||| |||| | |||||||    
T  4406327 atgtatgtggtctttattatagaccacatacatcatttaatgaataaatctaaaatgttgatttttacttataatagtgaccggatggtgtattt 4406233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 40575913 - 40575839
Alignment:
Q  141 tttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggagg 215  Q
    ||||||||| | || |||||||||||||| ||| |||| |||||||| |||||||||||||| ||||| ||||||    
T  40575913 tttattatatatcatatacattatttaataaatgaatttaaaatgttcatttttgtttataatagtgaccggagg 40575839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 2582887 - 2582809
Alignment:
Q  136 tgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggag 214  Q
    ||||||||||||||||| |||||||| ||||||| ||| |||  ||||| || ||||||| |||||| | |||||||||    
T  2582887 tgacctttattatagactacatacatcatttaatgaatcaatctaaaatattgatttttgcttataataatgatcggag 2582809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 24798182 - 24798260
Alignment:
Q  130 tgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    ||||| ||| |||||||||||||||| ||||| ||||||| ||| |||| ||||| || ||||||| |||||| |||||    
T  24798182 tgtatatgatctttattatagaccacgtacatcatttaatgaatgaatttaaaatattaatttttgcttataatagtga 24798260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 16170975 - 16171048
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcgga 213  Q
    ||||||||||||| |||||||| ||||||||||| |||  |||||||| ||||||  |||||| ||||| ||||    
T  16170975 ctttattatagactacatacatcatttaattaataaatctaaaatgttgatttttccttataatagtgaccgga 16171048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 25022592 - 25022519
Alignment:
Q  141 tttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggag 214  Q
    ||||||||||| ||||||||| ||||||| ||| |||  |||||||| |||| ||||||||| | |||||||||    
T  25022592 tttattatagatcacatacatcatttaatgaatgaatgtaaaatgttaatttgtgtttataataatgatcggag 25022519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 55416363 - 55416432
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaat-tcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||||||||||||||||||||||||||| ||| ||| | ||||| || ||||||| |||||| |||||    
T  55416363 ctttattatagaccacatacattatttaatgaatgaatataaaaattttgatttttgcttataacagtga 55416432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 23004048 - 23003976
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttata 201  Q
    |||||| ||| ||||||||||||| |||||||||||||||| ||  |||  |||||||| ||||||| |||||    
T  23004048 atgtatatgatctttattatagactacatacattatttaatgaacgaatctaaaatgttaatttttgcttata 23003976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 33036918 - 33037010
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtat 221  Q
    |||||||||  ||||| ||||||||||||||||| |||| | ||| |||  |||||||| | ||||| |||||| ||||| |||||| |||||    
T  33036918 atgtatgtggtctttaatatagaccacatacattctttattgaatgaatagaaaatgttaaattttgcttataatagtgaccggagggtgtat 33037010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 40814734 - 40814802
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||||||| |||||||| || ||||||| ||| |||  |||||||| |||||||||||||| |||||    
T  40814734 ctttattataaaccacatatatcatttaatgaatgaatctaaaatgttaatttttgtttataacagtga 40814802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 52914063 - 52914131
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||||||||||||||||||| ||||||| ||| |||  ||||| || ||||||| |||||| |||||    
T  52914063 ctttattatagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtga 52914131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 36786215 - 36786290
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggagg 215  Q
    |||||||||| ||||||||||| |||| || ||| ||| |||||| || ||||||| |||||| ||||| ||||||    
T  36786215 ctttattataaaccacatacatcatttgatgaatgaatccaaaatattgatttttgcttataatagtgaccggagg 36786290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 39533821 - 39533904
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtattt 223  Q
    |||||||||||| ||||||||| ||||||| ||| |||  |||||||| ||||||| |||||| | ||| || ||| |||||||    
T  39533821 ctttattatagatcacatacatcatttaatgaataaatctaaaatgttgatttttgcttataataatgaccgtagggtgtattt 39533904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 41654574 - 41654507
Alignment:
Q  141 tttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||||||||||| |||||| | |||||||||||||  |||||||| ||||||| || ||| |||||    
T  41654574 tttattatagaccatatacatcaattaattaattaatctaaaatgttgatttttgcttttaatagtga 41654507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 40952436 - 40952350
Alignment:
Q  127 atatgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcgga 213  Q
    |||||||| |||  |||||||||||||||||| || ||||||| ||| |||  |||||||| ||| ||| |||||| ||||| ||||    
T  40952436 atatgtatatgatttttattatagaccacatatatcatttaatgaatgaatctaaaatgttgattattgcttataatagtgaacgga 40952350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 2254023 - 2253954
Alignment:
Q  146 tatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggagg 215  Q
    |||||||||||||||| ||||||| ||| |||  ||||  || |||||||||||||| | ||||||||||    
T  2254023 tatagaccacatacatcatttaatgaataaatctaaaaaattaatttttgtttataataatgatcggagg 2253954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 4708622 - 4708573
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaatt 178  Q
    |||||| ||| |||||||||||||||||||||| ||||||| ||| ||||    
T  4708622 atgtatatgatctttattatagaccacatacatcatttaataaataaatt 4708573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 8826940 - 8826867
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcgga 213  Q
    |||||||||||| ||||||||| ||||||| ||| |||| |||||    |||||||||||||| ||||| ||||    
T  8826940 ctttattatagatcacatacatcatttaatgaataaatttaaaatacaaatttttgtttataatagtgaccgga 8826867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 21224739 - 21224832
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtt-tatttttgtttataaaagtgatcggaggttgtat 221  Q
    ||||| |||| |||||||||| ||||| ||||| ||||||| ||| |||  |||||||  | ||||||||||||| ||||| |||||| |||||    
T  21224739 atgtaggtgatctttattataaaccacgtacatcatttaatgaatgaatctaaaatgtagtttttttgtttataatagtgaccggagggtgtat 21224832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 39235223 - 39235158
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttattttt 194  Q
    |||||| ||| |||||||||| ||||||||||| ||||||| ||| |||  |||||||| ||||||    
T  39235223 atgtatatgatctttattataaaccacatacatcatttaataaatgaatctaaaatgttgattttt 39235158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 37897736 - 37897815
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||| ||| |||||||||||||||||||||| ||||||| ||| |||| |||||||| ||||||| |||||| |||||    
T  37897736 atgtatatgatctttattatagaccacatacataatttaatgaatgaatttaaaatgttgatttttgcttataatagtga 37897815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 140 - 220
Target Start/End: Complemental strand, 331873 - 331794
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgta 220  Q
    |||||||||||||||||||||| ||||||| ||| |||| |||||||| ||||||| |||||| ||||| |||||| ||||    
T  331873 ctttattatagaccacatacatcatttaatcaataaatt-aaaatgttgatttttgcttataatagtgaccggaggatgta 331794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 140 - 220
Target Start/End: Complemental strand, 48191790 - 48191710
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgta 220  Q
    |||||||||| ||||||||||| ||||||| ||| |||  |||||||| |||||||||||||| ||||| |||||| ||||    
T  48191790 ctttattataaaccacatacatcatttaatgaatgaatctaaaatgttaatttttgtttataatagtgaccggaggatgta 48191710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 54783452 - 54783384
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||||||||||||||||||| | ||||||||| |||  |||||||| |||||||||||||| |||||    
T  54783452 ctttattatagaccacatacatcaattaattaatgaatctaaaatgttaatttttgtttataatagtga 54783384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 27224654 - 27224575
Alignment:
Q  141 tttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgta 220  Q
    ||||||||||| ||||||||| ||||||| ||| |||  |||||||| |||||||||||||| ||||| |||||| ||||    
T  27224654 tttattatagatcacatacatcatttaatgaataaatctaaaatgttgatttttgtttataatagtgaccggagggtgta 27224575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 52215934 - 52216025
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgta 220  Q
    |||||| ||| |||||||||||||||||||||| ||||||| | | |||  |||||||| ||||||| |||||| ||||| |||||| ||||    
T  52215934 atgtatatgatctttattatagaccacatacatcatttaatgagtgaatctaaaatgttgatttttgcttataatagtgaccggagggtgta 52216025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 211
Target Start/End: Original strand, 40639865 - 40639931
Alignment:
Q  145 ttatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcg 211  Q
    ||||||||||||||||| ||||||| ||| |||| |||||||| ||||||| |||||| ||||||||    
T  40639865 ttatagaccacatacatcatttaatgaataaatttaaaatgttgatttttgcttataatagtgatcg 40639931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 20625310 - 20625246
Alignment:
Q  144 attatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||| ||||||||||| ||||||| ||| |||| |||||||| |||||||||||||| |||||    
T  20625310 attataaaccacatacatcatttaataaatgaatttaaaatgttgatttttgtttataatagtga 20625246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 37807585 - 37807517
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||||||| ||||||||||| ||| ||| ||| |||| |||||||| |||||||||||||| |||||    
T  37807585 ctttattataaaccacatacatcattcaatgaataaatttaaaatgttaatttttgtttataacagtga 37807517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 40639781 - 40639849
Alignment:
Q  147 atagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggagg 215  Q
    ||||||||||||||| ||||||| ||| |||| |||||||| ||||||| |||||| ||||| ||||||    
T  40639781 atagaccacatacatcatttaatgaatgaatttaaaatgttaatttttgcttataatagtgaccggagg 40639849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 51253756 - 51253683
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    |||||| ||| ||||||||||||| |||||||| ||||||| |||  ||| ||||| || ||||||||||||||    
T  51253756 atgtatatgaactttattatagacaacatacatcatttaataaatggatttaaaatattgatttttgtttataa 51253683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 12744966 - 12745034
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||||||||||||||||||| ||||||| |||  ||  |||||||| ||||||| |||||| |||||    
T  12744966 ctttattatagaccacatacatcatttaatgaatgtatctaaaatgttaatttttgcttataatagtga 12745034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 41254005 - 41253933
Alignment:
Q  141 tttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcgga 213  Q
    ||||||||| ||||||||||| ||||||| ||| |||  |||||||| ||||||| |||||| ||||| ||||    
T  41254005 tttattataaaccacatacatcatttaatgaatgaatataaaatgttgatttttgattataatagtgaccgga 41253933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 54595865 - 54595797
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    ||||||||| |||||||||||| ||||||| ||| |||  |||||||| ||||||| |||||| |||||    
T  54595865 ctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 54595797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 24722761 - 24722694
Alignment:
Q  141 tttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    ||||||||||||||||||||| ||||||| ||| |||  ||||| || ||||||| |||||| |||||    
T  24722761 tttattatagaccacatacatcatttaataaatgaatctaaaatattaatttttgcttataatagtga 24722694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 42929071 - 42929138
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtg 207  Q
    |||| ||||||||||||| ||| ||||| | |||||||  |||||||| |||||||||||||| ||||    
T  42929071 ctttcttatagaccacatgcatcatttactaaattaatctaaaatgttgatttttgtttataatagtg 42929138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 52866492 - 52866438
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttattttt 194  Q
    |||||||||||||||||||||| ||||||| ||| |||  |||||||| ||||||    
T  52866492 ctttattatagaccacatacatcatttaatgaatgaatctaaaatgttaattttt 52866438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 53638456 - 53638518
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    |||||||||||||| ||||||||||||||| |||  ||  ||||| ||||||||||| |||||    
T  53638456 ctttattatagaccccatacattatttaatgaatggataaaaaatatttatttttgtctataa 53638518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 22497026 - 22496945
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtat 221  Q
    |||||| ||||||||||||||| ||||||| ||| |||  ||||| || ||||||| |||||| |||||  ||||| |||||    
T  22497026 ctttatcatagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgactggagggtgtat 22496945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 45736762 - 45736681
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtat 221  Q
    |||||||||||||||||||||| ||||||| ||| |||  ||| | |  ||||||| |||||| ||||| |||||| |||||    
T  45736762 ctttattatagaccacatacatcatttaatgaatgaatctaaactatcgatttttgcttataatagtgaccggagggtgtat 45736681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 51060717 - 51060790
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    |||||| ||| |||||||||| | ||| ||||| ||||||| |||||||  ||||| || ||||||||||||||    
T  51060717 atgtatatgatctttattatatatcacgtacatcatttaataaattaatctaaaatattgatttttgtttataa 51060790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 38465864 - 38465782
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtatt 222  Q
    ||||||||| |||||||||||| ||||||| |||||||  |||||||| ||||||| |||||| ||||| |||||| ||||||    
T  38465864 ctttattatggaccacatacatcatttaatgaattaatctaaaatgttgatttttgcttataatagtgaccggagggtgtatt 38465782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 11093605 - 11093522
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtattt 223  Q
    |||||||||||||||||||||| ||||||| ||| |||  ||||| || ||||||  |||||| ||||||| ||||||||||||    
T  11093605 ctttattatagaccacatacatcatttaatgaatcaatctaaaatattgatttttacttataatagtgatcagaggttgtattt 11093522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 37182880 - 37182954
Alignment:
Q  139 cctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcgga 213  Q
    ||||||||||||||||||||||| ||||||| ||| |||| |||||||  |||||||  ||||| ||||||||||    
T  37182880 cctttattatagaccacatacatcatttaatgaatgaatttaaaatgtaaatttttgcgtataatagtgatcgga 37182954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 15119852 - 15119771
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtat 221  Q
    |||||||||||||||||||||| ||||||| ||| |||  |||||||| ||||||| |||||| ||||| || ||| |||||    
T  15119852 ctttattatagaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccgaagggtgtat 15119771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 21183392 - 21183473
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtat 221  Q
    ||||||| |||||||||||||| ||||||| ||| |||  |||||||| ||||||| |||||| ||||| |||||| |||||    
T  21183392 ctttattgtagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataacagtgaccggaggatgtat 21183473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 596092 - 596160
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||||||||| || |||||||||||||| ||| ||||  ||||||| |||||||||||||| |||||    
T  596092 ctttattatagatcatatacattatttaataaatgaatttgaaatgttgatttttgtttataatagtga 596160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 1961374 - 1961442
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||||||||||||||||||| ||||||| ||| |||  |||||||| ||||||| |||||| |||||    
T  1961374 ctttattatagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 1961442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 7079441 - 7079370
Alignment:
Q  144 attatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggagg 215  Q
    ||||||||||||||| || |||||||  || |||| |||||||| ||||||| |||||| ||||||||||||    
T  7079441 attatagaccacatatatcatttaatggatgaatttaaaatgttgatttttgcttataatagtgatcggagg 7079370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 31024246 - 31024163
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtattt 223  Q
    ||||||||| |||||||||||| ||||||| ||| |||  |||||||| ||||||| |||||| ||||| || ||| |||||||    
T  31024246 ctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccgtaggatgtattt 31024163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 3121496 - 3121422
Alignment:
Q  141 tttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggagg 215  Q
    ||||||||||| ||||||||||||||||| ||| |||  ||||| || ||||||| |||||| ||||| ||||||    
T  3121496 tttattatagatcacatacattatttaataaatgaatctaaaatattgatttttgcttataatagtgaccggagg 3121422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 15859625 - 15859553
Alignment:
Q  141 tttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcgga 213  Q
    |||||||||||| |||||||||||||||| ||| ||||  || |||| ||||||  |||||| ||||||||||    
T  15859625 tttattatagacaacatacattatttaatgaatgaatttgaattgttgatttttacttataatagtgatcgga 15859553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 32630471 - 32630539
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    ||||||||||||| |||||||| ||||||| ||| |||  |||||||| |||||| ||||||| |||||    
T  32630471 ctttattatagactacatacatcatttaatgaataaatctaaaatgttgatttttatttataatagtga 32630539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 10602369 - 10602307
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    |||||||||||||||||||||||||||| | ||| |||  || ||||| ||||||| ||||||    
T  10602369 ctttattatagaccacatacattatttactaaataaatcgaatatgttgatttttgcttataa 10602307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 18479404 - 18479342
Alignment:
Q  132 tatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttattttt 194  Q
    ||||||| ||||||||||||||||||| |||||||||  ||| |||  |||||||| ||||||    
T  18479404 tatgtgatctttattatagaccacatatattatttaacaaataaatctaaaatgttgattttt 18479342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 15916819 - 15916746
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    |||||| ||| |||| |||||||| |||||||||||||||| ||| |||  ||||| || ||||||| ||||||    
T  15916819 atgtatatgatctttgttatagactacatacattatttaatgaatgaatctaaaatattgatttttgcttataa 15916746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 32308330 - 32308407
Alignment:
Q  146 tatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtattt 223  Q
    |||||| ||||||||| ||||| | ||| |||| | || ||| ||||||| |||||| |||||||||||| |||||||    
T  32308330 tatagatcacatacataatttattaaatgaatttataaggttaatttttgcttataatagtgatcggagggtgtattt 32308407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 36547427 - 36547354
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    |||||||||| || ||||| ||| ||||||||| ||||| | ||| |||| |||||||  ||||||||||||||    
T  36547427 atgtatgtgatctatattaaagatcacatacatcatttattaaatgaatttaaaatgtcaatttttgtttataa 36547354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 3549844 - 3549906
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    |||||||||||||||||||||||||||||| ||| |||| |||||||| ||||||| ||||||    
T  3549844 ctttattatagaccacatacattatttaatgaatgaatttaaaatgttaatttttgcttataa 3549906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 50550173 - 50550259
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggagg 215  Q
    |||||| ||| |||||||||||| ||||||||| ||||||| ||| |||  |||||||| |||||| ||||||| ||||||||||||    
T  50550173 atgtatatgatctttattatagatcacatacatcatttaatgaatgaatctaaaatgttgatttttctttataatagtgatcggagg 50550259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 14885394 - 14885327
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtg 207  Q
    |||||||||||||||||||||| ||||||| ||| |||| |||||||| |||||| ||||||| ||||    
T  14885394 ctttattatagaccacatacataatttaatgaataaatttaaaatgttgatttttttttataatagtg 14885327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 14885552 - 14885485
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtg 207  Q
    |||||||||||||||||||||| ||||||| ||| |||| |||||||| |||||| ||||||| ||||    
T  14885552 ctttattatagaccacatacataatttaatgaataaatttaaaatgttgatttttttttataatagtg 14885485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 34953971 - 34953903
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||||||||||||||||||| ||||||| ||| |||| ||||| || ||||||| |||||| |||||    
T  34953971 ctttattatagaccacatacatcatttaatgaatgaatttaaaatattgatttttgcttataatagtga 34953903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 41007763 - 41007691
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttata 201  Q
    |||||||||  |||||||||||||||||||||| ||||||| ||| |||| ||||| || ||||||| |||||    
T  41007763 atgtatgtggtctttattatagaccacatacatcatttaatgaataaatttaaaatattgatttttgcttata 41007691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 14967311 - 14967240
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttat 200  Q
    |||||||||| ||||||||||| |||||||||| ||||||| ||| |||  |||||||| ||||||| ||||    
T  14967311 atgtatgtgatctttattataggccacatacatcatttaatgaataaatgtaaaatgttgatttttgcttat 14967240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 33765852 - 33765914
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    |||||||||||||||||||||| ||||||| ||| |||  |||||||| ||||||| ||||||    
T  33765852 ctttattatagaccacatacatcatttaataaatgaatctaaaatgttgatttttgcttataa 33765914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 50503237 - 50503310
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    |||||| ||| |||||||||||||||||||||| ||||||| ||| |||  |||||||| | |||| |||||||    
T  50503237 atgtatatgatctttattatagaccacatacatcatttaataaatgaatataaaatgttaacttttatttataa 50503310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 39362863 - 39362935
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttata 201  Q
    |||||| ||| |||||||||||||||||||| | ||||||| ||| |||  ||||| || |||||||||||||    
T  39362863 atgtatatgatctttattatagaccacatacttcatttaataaatgaatctaaaatattgatttttgtttata 39362935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 48083588 - 48083498
Alignment:
Q  131 gtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtat 221  Q
    |||| ||| |||||||||||||||||||||| ||||||| ||| ||   ||||| || ||||||| |||||| ||||| | |||| |||||    
T  48083588 gtatatgatctttattatagaccacatacatcatttaatgaatgaacctaaaatattaatttttgcttataatagtgaccagagggtgtat 48083498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 9590830 - 9590745
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggag 214  Q
    |||||| ||| |||||||||| |||||||||||| |||||| ||| |||  ||||||   | ||||| |||||| |||||||||||    
T  9590830 atgtatatgatctttattatataccacatacattgtttaatgaatgaatctaaaatgcaaaattttgcttataatagtgatcggag 9590745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 35544618 - 35544553
Alignment:
Q  130 tgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttg 195  Q
    ||||||||  ||| |||||||||||||||||| ||||||  ||| |||| |||||||| |||||||    
T  35544618 tgtatgtggtcttcattatagaccacatacatcatttaacgaatgaatttaaaatgttgatttttg 35544553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 41161530 - 41161611
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtat 221  Q
    |||||||||||||||||||||| ||| ||| ||| || | ||||||||  |||||| |||||  ||||| |||||| |||||    
T  41161530 ctttattatagaccacatacatcattaaatgaatgaacttaaaatgttattttttgcttatattagtgaccggagggtgtat 41161611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 30138863 - 30138797
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagt 206  Q
    ||||||||||||||||| |||| ||||||| ||| ||| ||||||||| ||||||| ||||||||||    
T  30138863 ctttattatagaccacacacatcatttaatgaatgaatccaaaatgttgatttttgcttataaaagt 30138797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 7295121 - 7295202
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtat 221  Q
    |||||||||| | ||||||||| ||||||| ||| |||  |||||||| |||||||||||||| | |||||||||| |||||    
T  7295121 ctttattatatatcacatacatcatttaataaatgaatgtaaaatgttaatttttgtttataataatgatcggagggtgtat 7295202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 25245208 - 25245289
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtat 221  Q
    ||||||| |||||||||||||| ||||||| ||| |||  |||||||| ||||||| |||||| ||||| |||||| |||||    
T  25245208 ctttattgtagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccggagggtgtat 25245289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 220
Target Start/End: Complemental strand, 10095794 - 10095714
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgta 220  Q
    |||||| ||||||||||||||| ||||||| ||| |||  |||||||| ||||||| |||||| ||||| |||||| ||||    
T  10095794 ctttatcatagaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccggagggtgta 10095714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 6455614 - 6455700
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtatttgtt 226  Q
    |||||||||||||||||||||| ||| ||| ||| ||   |||||||  ||||||| |||||  |||||||||||| ||||||||||    
T  6455614 ctttattatagaccacatacatcattaaatgaatgaacctaaaatgtagatttttgcttatattagtgatcggagggtgtatttgtt 6455700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 21586900 - 21586827
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    |||||| ||| |||||||||||||||||||||| ||| ||| ||| |||  ||||| || ||||||||||||||    
T  21586900 atgtatatgatctttattatagaccacatacatcattgaataaatgaatctaaaatattgatttttgtttataa 21586827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 2943287 - 2943219
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    ||||||| |||||||||||||| ||||||| ||| |||  |||||||| ||||||| |||||| |||||    
T  2943287 ctttattgtagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 2943219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 31115674 - 31115742
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||||||||||||||||||| ||||||| ||| ||   |||||||| ||||||| |||||| |||||    
T  31115674 ctttattatagaccacatacataatttaatgaatgaagctaaaatgttgatttttgcttataatagtga 31115742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 26385711 - 26385632
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||||||  |||||||||||||||||||||| ||||| | ||| |||  |||||||  || ||||||||||| |||||    
T  26385711 atgtatgtggtctttattatagaccacatacataatttattgaatgaatctaaaatgtaaatctttgtttataacagtga 26385632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 26904846 - 26904907
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttata 201  Q
    |||||||||||||||||||||| ||| ||| ||| ||| ||||||||| | ||||| |||||    
T  26904846 ctttattatagaccacatacatcattaaataaatgaatccaaaatgttaaattttgcttata 26904907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.000000000001; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 694259 - 694341
Alignment:
Q  128 tatgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatc 210  Q
    ||||||| ||| |||||||||||||||||||||| ||||| | ||| ||   |||||||| |||||||||||||| |||||||    
T  694259 tatgtatatgatctttattatagaccacatacataatttattaaataaacctaaaatgttgatttttgtttataagagtgatc 694341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 7505162 - 7505223
Alignment:
Q  141 tttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    ||||||||||| ||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  7505162 tttattatagatcacatacatcatttaatgaatgaatccaaaatgttgatttttgtttataa 7505223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 4297263 - 4297335
Alignment:
Q  141 tttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcgga 213  Q
    ||||||||| | || |||||| ||||||||||| |||  |||||||| |||||||||||||| ||||||||||    
T  4297263 tttattatatatcaaatacatcatttaattaatgaatataaaatgttgatttttgtttataatagtgatcgga 4297335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 10437703 - 10437783
Alignment:
Q  141 tttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtat 221  Q
    |||||||||||| |||||||| ||||||| ||| |||  |||||||| ||||||| |||||| ||||| |||||| |||||    
T  10437703 tttattatagactacatacataatttaataaatgaatctaaaatgttgatttttgcttataatagtgaccggagggtgtat 10437783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 18652835 - 18652912
Alignment:
Q  145 ttatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtatt 222  Q
    ||||| ||||||||||| ||||||| ||| |||  |||||||| |||||||||||||| |||||  ||| ||||||||    
T  18652835 ttataaaccacatacatcatttaatgaatgaatctaaaatgttgatttttgtttataatagtgactggatgttgtatt 18652912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 3100491 - 3100411
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgat 209  Q
    |||||| ||| ||||||||||||| |||||||| ||||| | ||| |||  |||||||| ||||||| |||||| ||||||    
T  3100491 atgtatatgatctttattatagactacatacatcatttattgaatgaatctaaaatgttaatttttgcttataatagtgat 3100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 8681750 - 8681824
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggag 214  Q
    ||||||| ||||||||||||||||||| || ||| |||| |||| ||| | |||||  ||||| |||||||||||    
T  8681750 ctttattgtagaccacatacattatttgatgaatgaatttaaaacgttgagttttgcctataatagtgatcggag 8681824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 28518787 - 28518849
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    |||||||||||||||||||||| ||||||| ||| |||  ||||| || ||||||| ||||||    
T  28518787 ctttattatagaccacatacatcatttaatgaatcaatctaaaattttgatttttgcttataa 28518849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 13710356 - 13710409
Alignment:
Q  141 tttattatagaccacatacattatttaattaattaattcaaaatgtttattttt 194  Q
    ||||||||||||| ||||||||||||||| ||| |||  |||||||| ||||||    
T  13710356 tttattatagacctcatacattatttaatgaataaatataaaatgttgattttt 13710409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 32198928 - 32198855
Alignment:
Q  147 atagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgta 220  Q
    ||||||||||||||||||||| | ||| || | |||| ||  |||||||||||||  |||||||||||| ||||    
T  32198928 atagaccacatacattatttattgaataaacttaaaaggtagatttttgtttatattagtgatcggagggtgta 32198855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 36897817 - 36897744
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcgga 213  Q
    |||||||||| ||||||||||| ||||| ||||| |||| |||||||  ||||||  |||||| ||| ||||||    
T  36897817 ctttattataaaccacatacatcatttatttaatgaatttaaaatgtaaatttttacttataatagtaatcgga 36897744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 216338 - 216406
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||||||| || |||||||| ||||||| |||||||| |||||||| | ||||| ||||||||||||    
T  216338 ctttattataaacgacatacatcatttaatgaattaatttaaaatgttaaattttgcttataaaagtga 216406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 146043 - 145968
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggagg 215  Q
    ||||||| |||||||||||||| ||||||| ||| |||  |||||| | |||||||||||||| ||||| ||||||    
T  146043 ctttattttagaccacatacatcatttaatgaatgaatctaaaatgatgatttttgtttataatagtgaccggagg 145968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 24671 - 24746
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggagg 215  Q
    |||||||||||||||||||||| ||||||| ||| |||  ||||| || ||||||| |||||| ||||| ||||||    
T  24671 ctttattatagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgaccggagg 24746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000007; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 26527255 - 26527330
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggagg 215  Q
    |||||||||| ||||||||||| ||||||| ||| |||  |||||||| ||||||| |||||| ||||| ||||||    
T  26527255 ctttattataaaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaacggagg 26527330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 31158918 - 31158864
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttattttt 194  Q
    |||||||||||||||||||||||||| ||||||| |||  |||||||| ||||||    
T  31158918 ctttattatagaccacatacattattcaattaataaatctaaaatgttgattttt 31158864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 10258377 - 10258297
Alignment:
Q  142 ttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtatt 222  Q
    |||||||||||||  ||||| ||||||| ||| |||  |||||||| |||||||||||||| |||||  ||||| ||||||    
T  10258377 ttattatagaccatgtacatcatttaataaatgaatctaaaatgttgatttttgtttataacagtgactggaggatgtatt 10258297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 220
Target Start/End: Complemental strand, 12383862 - 12383782
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgta 220  Q
    ||||||||||||||| ||||| |||||||| |||||||  ||||| || ||||||  |||||| | |||||||||| ||||    
T  12383862 ctttattatagaccatatacactatttaatgaattaatctaaaatattaattttttcttataatattgatcggagggtgta 12383782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 34379800 - 34379868
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    ||||||||| |||||||||||| ||||||| ||| |||  |||||||| ||||||| |||||| |||||    
T  34379800 ctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 34379868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 8449643 - 8449576
Alignment:
Q  146 tatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcgga 213  Q
    |||||||||||||||| ||||| | ||| ||| |||||| || ||||||| |||||| ||||||||||    
T  8449643 tatagaccacatacatcatttattgaataaatccaaaatattaatttttgcttataatagtgatcgga 8449576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 8458447 - 8458380
Alignment:
Q  146 tatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcgga 213  Q
    |||||||||||||||| ||||| | ||| ||| |||||| || ||||||| |||||| ||||||||||    
T  8458447 tatagaccacatacatcatttattgaataaatccaaaatattaatttttgcttataatagtgatcgga 8458380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 29072154 - 29072063
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgta 220  Q
    ||||||||||  ||||| ||||  ||||||||| ||||||| ||| |||| |||||||| ||||||||||| ||  ||||||| ||| ||||    
T  29072154 atgtatgtgatatttatgataggtcacatacatcatttaataaatgaatttaaaatgttgatttttgtttaaaattgtgatcgaagggtgta 29072063  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 29104727 - 29104636
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgta 220  Q
    ||||||||||  ||||| ||||  ||||||||| ||||||| ||| |||| |||||||| ||||||||||| ||  ||||||| ||| ||||    
T  29104727 atgtatgtgatatttatgataggtcacatacatcatttaataaatgaatttaaaatgttgatttttgtttaaaattgtgatcgaagggtgta 29104636  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 15517155 - 15517217
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    |||||||||||||||||||||| ||||||| ||| |||  ||||| || ||||||| ||||||    
T  15517155 ctttattatagaccacatacatcatttaatgaatgaatctaaaatattgatttttgcttataa 15517217  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 18886384 - 18886302
Alignment:
Q  139 cctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtat 221  Q
    |||||||||||||||||||| || ||||||| ||| |||  ||||| || ||||||| |||||| |||||  ||||| |||||    
T  18886384 cctttattatagaccacatatatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgactggagggtgtat 18886302  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 20704098 - 20704036
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    ||||||||||||||||||| |||||| ||| ||| |||| ||||| || ||||||| ||||||    
T  20704098 ctttattatagaccacatatattattgaatgaatgaatttaaaatattgatttttgattataa 20704036  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 31996565 - 31996647
Alignment:
Q  141 tttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcggaggttgtattt 223  Q
    |||||||||||| |||||||| ||||||| ||| ||   |||||||| ||||||| |||||| ||||| |||||  |||||||    
T  31996565 tttattatagactacatacatcatttaataaatgaacctaaaatgttgatttttgcttataatagtgaccggagagtgtattt 31996647  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 34170147 - 34170085
Alignment:
Q  146 tatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    |||||| ||||||||| ||||||| ||| |||  |||||||| |||||||||||||| |||||    
T  34170147 tatagatcacatacatcatttaatgaatgaatctaaaatgttgatttttgtttataatagtga 34170085  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 3102203 - 3102272
Alignment:
Q  140 ctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgat 209  Q
    |||||||||| |||| |||||||||||||| ||  |||| |||||||| ||||||  |||||| ||||||    
T  3102203 ctttattatataccatatacattatttaataaacaaatttaaaatgttaatttttacttataatagtgat 3102272  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 34313553 - 34313614
Alignment:
Q  141 tttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataa 202  Q
    ||||||||| ||||||||  ||||||||||||| |||  |||||||| |||||| |||||||    
T  34313553 tttattataaaccacatattttatttaattaataaatcgaaaatgttaatttttatttataa 34313614  T

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Target: scaffold0113 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 40538 - 40460
Alignment:
Q  130 tgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtga 208  Q
    ||||| ||| |||||||||||||| ||||||| ||||||| ||| |||  |||||||| |||||| ||||||| |||||    
T  40538 tgtatatgatctttattatagaccgcatacatcatttaatgaataaatctaaaatgttgatttttatttataatagtga 40460  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 89684 - 89602
Alignment:
Q  129 atgtatgtgacctttattatagaccacatacattatttaattaattaattcaaaatgtttatttttgtttataaaagtgatcg 211  Q
    |||||| ||| |||||||||||| ||||||||| ||||||| ||  |||  |||||||| ||||||| |||||| | ||||||    
T  89684 atgtatatgatctttattatagatcacatacatcatttaatgaaagaatctaaaatgttgatttttgcttataataatgatcg 89602  T

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