View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0830_high_69 (Length: 349)

Name: NF0830_high_69
Description: NF0830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0830_high_69
NF0830_high_69
[»] chr4 (39 HSPs)
chr4 (5-167)||(17506984-17507146)
chr4 (169-229)||(51965373-51965432)
chr4 (169-229)||(18320692-18320752)
chr4 (170-230)||(27579516-27579575)
chr4 (169-229)||(51396160-51396219)
chr4 (169-228)||(5401995-5402054)
chr4 (169-216)||(18454193-18454240)
chr4 (169-216)||(18454439-18454486)
chr4 (169-215)||(21780366-21780412)
chr4 (169-219)||(22272931-22272980)
chr4 (169-218)||(13334823-13334872)
chr4 (169-218)||(49166970-49167019)
chr4 (169-229)||(21780123-21780182)
chr4 (169-216)||(16493519-16493565)
chr4 (169-219)||(5401762-5401812)
chr4 (169-215)||(19875981-19876027)
chr4 (169-215)||(20125429-20125474)
chr4 (169-215)||(21798333-21798379)
chr4 (169-215)||(35539791-35539836)
chr4 (188-218)||(47858437-47858467)
chr4 (169-215)||(49166646-49166692)
chr4 (188-218)||(49300756-49300786)
chr4 (169-215)||(50727591-50727636)
chr4 (169-215)||(50735605-50735650)
chr4 (188-228)||(12388104-12388145)
chr4 (169-218)||(17289743-17289792)
chr4 (169-218)||(18164889-18164938)
chr4 (169-218)||(21246477-21246526)
chr4 (188-221)||(31857212-31857245)
chr4 (169-229)||(44519458-44519518)
chr4 (189-218)||(49296023-49296052)
chr4 (169-218)||(54130540-54130588)
chr4 (188-216)||(8652843-8652871)
chr4 (188-216)||(8664650-8664678)
chr4 (159-215)||(29104150-29104205)
chr4 (188-216)||(31067966-31067994)
chr4 (188-228)||(33316723-33316763)
chr4 (188-228)||(35370386-35370426)
chr4 (188-228)||(39133105-39133145)
[»] chr8 (40 HSPs)
chr8 (18-157)||(23387857-23387996)
chr8 (11-157)||(25334505-25334648)
chr8 (9-157)||(25437604-25437749)
chr8 (169-226)||(4482046-4482102)
chr8 (169-218)||(29309782-29309830)
chr8 (9-157)||(25298846-25298991)
chr8 (169-228)||(3912257-3912316)
chr8 (169-228)||(27543412-27543471)
chr8 (169-230)||(25277701-25277762)
chr8 (169-219)||(27198145-27198194)
chr8 (169-218)||(11830501-11830550)
chr8 (169-218)||(29309566-29309614)
chr8 (169-217)||(960506-960553)
chr8 (169-217)||(4482289-4482337)
chr8 (9-157)||(25567986-25568131)
chr8 (9-157)||(25765389-25765534)
chr8 (169-216)||(24970964-24971011)
chr8 (169-228)||(24971175-24971234)
chr8 (169-208)||(30112912-30112951)
chr8 (169-215)||(12478574-12478620)
chr8 (188-218)||(12478899-12478929)
chr8 (169-215)||(13567239-13567285)
chr8 (169-211)||(17818089-17818131)
chr8 (169-218)||(25277473-25277522)
chr8 (169-214)||(27543637-27543681)
chr8 (169-218)||(32684562-32684611)
chr8 (167-228)||(42406222-42406282)
chr8 (188-228)||(3912478-3912518)
chr8 (188-216)||(4100706-4100734)
chr8 (169-229)||(14329377-14329437)
chr8 (169-217)||(14329609-14329656)
chr8 (188-216)||(18367270-18367298)
chr8 (188-228)||(23428755-23428795)
chr8 (188-228)||(30222085-30222125)
chr8 (188-216)||(34662558-34662586)
chr8 (188-216)||(34820592-34820620)
chr8 (166-217)||(38500523-38500572)
chr8 (188-228)||(38703620-38703660)
chr8 (171-215)||(41509710-41509754)
chr8 (169-217)||(41565517-41565565)
[»] scaffold0027 (1 HSPs)
scaffold0027 (47-160)||(54803-54916)
[»] chr3 (37 HSPs)
chr3 (164-230)||(49880499-49880565)
chr3 (169-218)||(5205117-5205166)
chr3 (169-218)||(5205362-5205411)
chr3 (169-217)||(4699976-4700024)
chr3 (169-218)||(51252292-51252341)
chr3 (169-228)||(8355564-8355623)
chr3 (169-216)||(30586163-30586210)
chr3 (169-218)||(7118088-7118137)
chr3 (188-229)||(27760308-27760349)
chr3 (169-218)||(42349018-42349067)
chr3 (169-218)||(49872957-49873005)
chr3 (7-126)||(10917332-10917449)
chr3 (171-214)||(5417278-5417320)
chr3 (169-215)||(300496-300542)
chr3 (161-215)||(5572282-5572336)
chr3 (190-228)||(14004253-14004291)
chr3 (188-218)||(14241233-14241263)
chr3 (169-207)||(27432840-27432878)
chr3 (188-229)||(38442214-38442256)
chr3 (188-229)||(40816944-40816986)
chr3 (169-215)||(52839628-52839674)
chr3 (169-218)||(6510216-6510264)
chr3 (169-218)||(18464954-18465003)
chr3 (169-229)||(19624006-19624066)
chr3 (170-215)||(22949248-22949292)
chr3 (188-228)||(23626234-23626275)
chr3 (169-214)||(49880749-49880793)
chr3 (169-218)||(51252050-51252098)
chr3 (180-216)||(5571964-5572000)
chr3 (187-219)||(7118324-7118356)
chr3 (7-126)||(10922529-10922646)
chr3 (169-217)||(25110070-25110117)
chr3 (188-216)||(29224603-29224631)
chr3 (167-219)||(31797541-31797593)
chr3 (188-216)||(38441006-38441034)
chr3 (188-216)||(38640417-38640445)
chr3 (169-228)||(47115559-47115618)
[»] scaffold1493 (1 HSPs)
scaffold1493 (9-157)||(1542-1687)
[»] chr7 (36 HSPs)
chr7 (169-217)||(20041144-20041192)
chr7 (169-229)||(48104725-48104784)
chr7 (169-215)||(15994769-15994815)
chr7 (169-214)||(3951384-3951429)
chr7 (169-218)||(13797417-13797466)
chr7 (181-229)||(31864024-31864072)
chr7 (169-229)||(38192963-38193023)
chr7 (169-217)||(39580175-39580222)
chr7 (164-211)||(1676407-1676454)
chr7 (169-228)||(21443866-21443925)
chr7 (163-218)||(24845633-24845687)
chr7 (167-229)||(44414075-44414135)
chr7 (169-215)||(442535-442581)
chr7 (186-228)||(2240866-2240908)
chr7 (188-218)||(2300841-2300871)
chr7 (169-207)||(12180853-12180891)
chr7 (169-215)||(13263870-13263916)
chr7 (169-215)||(13638067-13638113)
chr7 (169-215)||(15720930-15720976)
chr7 (169-215)||(19272220-19272266)
chr7 (169-215)||(21522098-21522144)
chr7 (169-215)||(24555912-24555957)
chr7 (188-218)||(32946578-32946608)
chr7 (169-215)||(47370153-47370199)
chr7 (169-218)||(13286873-13286922)
chr7 (169-214)||(15037417-15037462)
chr7 (188-229)||(33440885-33440926)
chr7 (171-228)||(39065386-39065442)
chr7 (169-218)||(47370478-47370527)
chr7 (188-228)||(2301138-2301178)
chr7 (188-216)||(11685273-11685301)
chr7 (173-229)||(13286635-13286691)
chr7 (159-215)||(21298005-21298060)
chr7 (188-228)||(24478043-24478083)
chr7 (188-216)||(42042906-42042934)
chr7 (180-216)||(46146060-46146096)
[»] chr5 (27 HSPs)
chr5 (166-218)||(33658868-33658920)
chr5 (161-228)||(10976745-10976811)
chr5 (169-228)||(39153417-39153476)
chr5 (169-229)||(31861492-31861552)
chr5 (169-218)||(39418959-39419008)
chr5 (181-228)||(31920343-31920390)
chr5 (169-228)||(33659103-33659162)
chr5 (162-228)||(711231-711297)
chr5 (169-218)||(6117908-6117957)
chr5 (166-218)||(9227092-9227144)
chr5 (189-228)||(13924344-13924383)
chr5 (163-218)||(22642330-22642385)
chr5 (181-216)||(26243428-26243463)
chr5 (188-218)||(20960883-20960913)
chr5 (188-218)||(26035092-26035122)
chr5 (169-215)||(41123473-41123519)
chr5 (166-215)||(9005097-9005146)
chr5 (173-218)||(16504954-16504999)
chr5 (164-229)||(20688792-20688856)
chr5 (169-218)||(29754049-29754098)
chr5 (169-218)||(33053054-33053103)
chr5 (188-229)||(40339534-40339574)
chr5 (188-216)||(2724702-2724730)
chr5 (169-228)||(12147909-12147969)
chr5 (188-216)||(25354540-25354568)
chr5 (169-217)||(35798692-35798739)
chr5 (188-216)||(41825064-41825092)
[»] chr2 (36 HSPs)
chr2 (169-229)||(28149663-28149722)
chr2 (169-228)||(34635940-34635999)
chr2 (169-217)||(11839028-11839076)
chr2 (167-218)||(10851699-10851749)
chr2 (169-218)||(15543715-15543764)
chr2 (169-218)||(17328093-17328141)
chr2 (169-218)||(20182265-20182313)
chr2 (169-218)||(34635707-34635755)
chr2 (169-218)||(37147552-37147600)
chr2 (162-215)||(38949850-38949903)
chr2 (169-217)||(19641447-19641494)
chr2 (169-217)||(19840040-19840087)
chr2 (169-229)||(22535680-22535739)
chr2 (167-215)||(38385934-38385981)
chr2 (169-228)||(6468059-6468117)
chr2 (163-218)||(22116150-22116204)
chr2 (181-216)||(25103744-25103779)
chr2 (188-218)||(758753-758783)
chr2 (169-219)||(7894207-7894257)
chr2 (169-215)||(18555577-18555623)
chr2 (169-215)||(19272663-19272708)
chr2 (190-228)||(29949868-29949906)
chr2 (164-218)||(38950181-38950235)
chr2 (188-226)||(40321447-40321485)
chr2 (169-215)||(45464622-45464667)
chr2 (168-228)||(18701551-18701611)
chr2 (169-218)||(25227824-25227873)
chr2 (169-218)||(30371386-30371434)
chr2 (167-216)||(37147795-37147844)
chr2 (188-217)||(41101019-41101048)
chr2 (169-229)||(22535455-22535514)
chr2 (164-220)||(22829343-22829399)
chr2 (188-216)||(36528978-36529006)
chr2 (188-216)||(42631798-42631826)
chr2 (188-216)||(43440493-43440521)
chr2 (188-216)||(43441792-43441820)
[»] chr1 (35 HSPs)
chr1 (169-229)||(42736818-42736877)
chr1 (169-216)||(35034305-35034351)
chr1 (169-230)||(2472391-2472452)
chr1 (159-217)||(13154570-13154628)
chr1 (23-157)||(24650837-24650969)
chr1 (169-218)||(8620200-8620249)
chr1 (164-209)||(34360261-34360306)
chr1 (169-217)||(18458811-18458858)
chr1 (188-228)||(22387164-22387204)
chr1 (188-228)||(23889696-23889736)
chr1 (169-229)||(27794590-27794650)
chr1 (169-228)||(28724326-28724384)
chr1 (170-217)||(33573891-33573938)
chr1 (188-218)||(10027775-10027805)
chr1 (169-215)||(22604673-22604718)
chr1 (169-215)||(24987609-24987654)
chr1 (169-230)||(28797160-28797222)
chr1 (159-217)||(46561377-46561435)
chr1 (169-218)||(10027985-10028033)
chr1 (256-305)||(15336867-15336916)
chr1 (169-214)||(27794359-27794404)
chr1 (169-229)||(28410915-28410975)
chr1 (169-229)||(31532486-31532546)
chr1 (188-216)||(1824515-1824543)
chr1 (166-218)||(7112729-7112780)
chr1 (188-216)||(7610475-7610503)
chr1 (161-217)||(9439411-9439466)
chr1 (188-216)||(15234205-15234233)
chr1 (169-229)||(15790469-15790529)
chr1 (188-228)||(15879966-15880006)
chr1 (188-216)||(16279250-16279278)
chr1 (188-228)||(21771038-21771078)
chr1 (188-228)||(31883775-31883815)
chr1 (186-218)||(34748063-34748095)
chr1 (166-229)||(47220910-47220973)
[»] scaffold0769 (2 HSPs)
scaffold0769 (169-228)||(3915-3974)
scaffold0769 (169-218)||(4159-4207)
[»] scaffold0079 (1 HSPs)
scaffold0079 (169-229)||(6811-6871)
[»] chr6 (26 HSPs)
chr6 (169-229)||(3593341-3593401)
chr6 (169-228)||(19325835-19325893)
chr6 (169-228)||(31851990-31852049)
chr6 (163-228)||(18591116-18591180)
chr6 (169-218)||(31851759-31851807)
chr6 (161-217)||(30381559-30381614)
chr6 (159-218)||(21544456-21544515)
chr6 (188-218)||(1228002-1228032)
chr6 (190-228)||(16659535-16659573)
chr6 (169-215)||(17158442-17158488)
chr6 (169-215)||(21544131-21544177)
chr6 (169-215)||(22362619-22362665)
chr6 (169-218)||(7922318-7922366)
chr6 (188-217)||(8237985-8238014)
chr6 (169-218)||(10344051-10344099)
chr6 (188-217)||(26882379-26882408)
chr6 (169-218)||(29942451-29942499)
chr6 (188-216)||(11536754-11536782)
chr6 (188-216)||(11562264-11562292)
chr6 (161-217)||(13728929-13728985)
chr6 (188-216)||(16840317-16840345)
chr6 (188-216)||(21180392-21180420)
chr6 (188-216)||(22794109-22794137)
chr6 (169-217)||(25400786-25400834)
chr6 (188-216)||(30240585-30240613)
chr6 (188-216)||(32131866-32131894)
[»] scaffold0070 (1 HSPs)
scaffold0070 (9-127)||(21823-21938)
[»] scaffold0450 (2 HSPs)
scaffold0450 (169-229)||(8092-8151)
scaffold0450 (169-229)||(7860-7919)
[»] scaffold0113 (2 HSPs)
scaffold0113 (170-218)||(28072-28120)
scaffold0113 (255-296)||(28896-28937)
[»] scaffold0142 (2 HSPs)
scaffold0142 (169-228)||(34570-34629)
scaffold0142 (169-228)||(34824-34882)
[»] scaffold0031 (1 HSPs)
scaffold0031 (169-216)||(2069-2116)
[»] scaffold0041 (1 HSPs)
scaffold0041 (266-300)||(38049-38083)
[»] scaffold0022 (1 HSPs)
scaffold0022 (188-218)||(63051-63081)
[»] scaffold0384 (1 HSPs)
scaffold0384 (169-218)||(4250-4298)
[»] scaffold0289 (1 HSPs)
scaffold0289 (191-228)||(6748-6785)
[»] scaffold0010 (1 HSPs)
scaffold0010 (169-218)||(26309-26357)
[»] scaffold0092 (1 HSPs)
scaffold0092 (163-215)||(44386-44437)
[»] scaffold0068 (1 HSPs)
scaffold0068 (190-218)||(38633-38661)
[»] scaffold0021 (1 HSPs)
scaffold0021 (188-216)||(23916-23944)
[»] scaffold0002 (1 HSPs)
scaffold0002 (188-228)||(332084-332124)


Alignment Details
Target: chr4 (Bit Score: 147; Significance: 2e-77; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 17507146 - 17506984
Alignment:
Q  5 agatagtttgttatggttgttagctacttttaaacaaagatcgttagcttttgatcaattacttgatcagcaagtaatatacataagcttgtatgtaagt 104  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  17507146 agatggtttgttatggttgttagctacttttaaacaaagatcgttagcttttgatcatttacttgatcagcaagtaatatacataagcttgtatataagt 17507047  T
Q  105 atgatgtaaacacactttcattgataacgataataacaagtttacaatcaatagttaattata 167  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17507046 atgatgtaaacacactttcattgataatgataataacaagtttacaatcaatagttaattata 17506984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 51965373 - 51965432
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  51965373 ggttaataggtcttta-ctccctgtaatataggtcatttccggttttccctctgtaaaatt 51965432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 18320752 - 18320692
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||  |||||||||    
T  18320752 ggttaataggtctttacccccctgtaatataggtcatttccggttttccccctgtaaaatt 18320692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 27579516 - 27579575
Alignment:
Q  170 gttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatta 230  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| || ||||||||||    
T  27579516 gttaataggtctttacc-ccctgtaatataggtcatttccggttttctctctgtaaaatta 27579575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 51396160 - 51396219
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| |||||| |||||||||||| |||||||| |||||||||| |||||||||    
T  51396160 ggttaataggtctttatc-ccctgtaatataagtcatttctggttttccctctgtaaaatt 51396219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 5402054 - 5401995
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||| |||| | || ||||||||||||||||||||||||||||  ||||||||    
T  5402054 ggttaataggtctttacccccttgtaatataggtcatttccggttttccccctgtaaaat 5401995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 18454193 - 18454240
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttc 216  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||    
T  18454193 ggttaataggtctttacccccctgtaatataggtcatttccggttttc 18454240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 18454486 - 18454439
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttc 216  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||    
T  18454486 ggttaataggtctttacccccctgtaatataggtcatttccggttttc 18454439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 21780412 - 21780366
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  21780412 ggttaataggtctttacctccctgtaatataggtcatttctggtttt 21780366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 22272931 - 22272980
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccct 219  Q
    |||||||||||||||| | |||||||||||||||||||| |||||||||||    
T  22272931 ggttaataggtttttacc-ccctgtaatataggtcattttcggttttccct 22272980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 13334823 - 13334872
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | ||||||||||||||||||||| |||||||||    
T  13334823 ggttaataggtctttacccccctgtaatataggtcatttctggttttccc 13334872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 49167019 - 49166970
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||  ||||| | |||||||||||||||||||||||||||||||    
T  49167019 ggttaatagtgttttacccccctgtaatataggtcatttccggttttccc 49166970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 21780123 - 21780182
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| |||| | |||||||||||||||||||| ||||||||||  |||||||||    
T  21780123 ggttaataggtctttacc-ccctgtaatataggtcattttcggttttccccctgtaaaatt 21780182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 16493519 - 16493565
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttc 216  Q
    ||||||||||| |||| |||| ||||||||||||||||||||||||||    
T  16493519 ggttaataggtctttacctcc-tgtaatataggtcatttccggttttc 16493565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 5401762 - 5401812
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccct 219  Q
    ||||||||||| |||| | |||||||||||||||||||| || ||||||||    
T  5401762 ggttaataggtctttacccccctgtaatataggtcattttcgattttccct 5401812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 19876027 - 19875981
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    ||||||||||| |||| | |||||||||||||||||||| |||||||    
T  19876027 ggttaataggtctttaaccccctgtaatataggtcattttcggtttt 19875981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 20125474 - 20125429
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||    
T  20125474 ggttaataggtctttacc-ccctgtaatataggtcatttccggtttt 20125429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 21798333 - 21798379
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    ||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  21798333 ggttaataggtctttacccccctgtaatataggtcatttctggtttt 21798379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 35539836 - 35539791
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||    
T  35539836 ggttaataggtatttacc-ccctgtaatataggtcatttccggtttt 35539791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 47858467 - 47858437
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||||||||||||||||||    
T  47858467 ccctgtaatataggtcatttccggttttccc 47858437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 49166646 - 49166692
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||| | ||||||||||||||||||||||||||||    
T  49166646 ggttaatagtgttttacccccctgtaatataggtcatttccggtttt 49166692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Original strand, 49300756 - 49300786
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||||||||||||||||||    
T  49300756 ccctgtaatataggtcatttccggttttccc 49300786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 50727591 - 50727636
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||||||||| | ||||||||||||||||||||| ||||||    
T  50727591 ggttaataggtttttacc-ccctgtaatataggtcatttctggtttt 50727636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 50735605 - 50735650
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||||||||| | ||||||||||||||||||||| ||||||    
T  50735605 ggttaataggtttttacc-ccctgtaatataggtcatttctggtttt 50735650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 12388104 - 12388145
Alignment:
Q  188 ccctgtaatataggtcatttccggtttt-ccctttgtaaaat 228  Q
    |||||||||||||||||||||||||||| ||| |||||||||    
T  12388104 ccctgtaatataggtcatttccggttttaccccttgtaaaat 12388145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 17289743 - 17289792
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||||| ||||| ||||||||||||||  |||||||||    
T  17289743 ggttaataggtctttatccccctgaaatataggtcatttttggttttccc 17289792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 18164889 - 18164938
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||  ||||| | |||||||||||| ||||||||||||||||||    
T  18164889 ggttaatagtgttttacccccctgtaatatatgtcatttccggttttccc 18164938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 21246477 - 21246526
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| ||||   |||||||||||||||||||| ||||||||||    
T  21246477 ggttaataggtctttacacccctgtaatataggtcattttcggttttccc 21246526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Complemental strand, 31857245 - 31857212
Alignment:
Q  188 ccctgtaatataggtcatttccggttttcccttt 221  Q
    |||||||||||| |||||||||||||||||||||    
T  31857245 ccctgtaatatatgtcatttccggttttcccttt 31857212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 44519458 - 44519518
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccgg-ttttccctttgtaaaatt 229  Q
    ||||||||||| |||| |||| ||||||| ||||||||||||| ||||||| ||||||||||    
T  44519458 ggttaataggtctttacctcc-tgtaatagaggtcatttccggtttttccccttgtaaaatt 44519518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 49296023 - 49296052
Alignment:
Q  189 cctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||||||||||||||||||||||    
T  49296023 cctgtaatataggtcatttccggttttccc 49296052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 54130588 - 54130540
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||||| |||| |||||||||||||||||| |||||||    
T  54130588 ggttaataggtctttatc-ccctctaatataggtcatttccgattttccc 54130540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 8652871 - 8652843
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  8652871 ccctgtaatataggtcatttccggttttc 8652843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 8664678 - 8664650
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  8664678 ccctgtaatataggtcatttccggttttc 8664650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 29104150 - 29104205
Alignment:
Q  159 ttaattataaggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||| |||| |||||||||  ||||| | ||||||||||||||||||||||||||||    
T  29104150 ttaaatatagggttaatagtgttttacc-ccctgtaatataggtcatttccggtttt 29104205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 31067966 - 31067994
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  31067966 ccctgtaatataggtcatttccggttttc 31067994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 33316763 - 33316723
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||||||||||||||||||| |||  ||||||||    
T  33316763 ccctgtaatataggtcatttccggtttcccccctgtaaaat 33316723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 35370426 - 35370386
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||||||||||||  |||||||||| ||||||||    
T  35370426 ccctgtaatataggtcatttttggttttccctctgtaaaat 35370386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 39133105 - 39133145
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||||||||||||||||||||||| |||  |||||||    
T  39133105 ccctgtaatataggtcatttccggttttacctccgtaaaat 39133145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 7e-40; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 23387996 - 23387857
Alignment:
Q  18 tggttgttagctacttttaaacaaagatcgttagcttttgatcaattacttgatcagcaagtaatatacataagcttgtatgtaagtatgatgtaaacac 117  Q
    |||||||||||||||||||| ||||| | |||||||||||||  |||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||    
T  23387996 tggttgttagctacttttaatcaaagtttgttagcttttgattgattacttgataagcaagtaatgtacataagcttgtatataagtatgatgtaaacac 23387897  T
Q  118 actttcattgataacgataataacaagtttacaatcaata 157  Q
    ||||||| || |||  | ||||||||||||| ||||||||    
T  23387896 actttcaatgctaattagaataacaagtttagaatcaata 23387857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 25334505 - 25334648
Alignment:
Q  11 tttgttatggttgttagctacttttaaacaaagatcgttagcttttgatcaattacttgatcagcaagtaatatacataagcttgtatgtaagtatgatg 110  Q
    ||||||||| ||||||||||||||||| ||| | | ||||| ||||||  ||||||||| | |||||||||| |||||| |||||||| ||||||||| |    
T  25334505 tttgttatgtttgttagctacttttaagcaa-gtttgttag-ttttgaataattacttgtttagcaagtaatgtacata-gcttgtatataagtatgacg 25334601  T
Q  111 taaacacactttcattgataacgataataacaagtttacaatcaata 157  Q
    ||||| || |||||||| ||| |  |||||||||||| |||||||||    
T  25334602 taaacccaatttcattgctaatgtgaataacaagttttcaatcaata 25334648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 25437604 - 25437749
Alignment:
Q  9 agtttgttatggttgttagctacttttaaacaaagatcgttagcttttgatcaattacttgatcagcaagtaatatacataagcttgtatgtaagtatga 108  Q
    ||||||||||| ||||||||||||||||| | ||| | ||||| ||||||  ||||||||  | |||||||||| ||||| ||||||||| ||  |||||    
T  25437604 agtttgttatgtttgttagctacttttaagc-aagtttgttag-ttttgaataattacttttttagcaagtaatgtacat-agcttgtatatacctatga 25437700  T
Q  109 tgtaaacacactttcattgataacgataataacaagtttacaatcaata 157  Q
    ||||||| || |||||||| ||| |  | |||||||||| |||||||||    
T  25437701 tgtaaacccaatttcattgttaatgtgagtaacaagttttcaatcaata 25437749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 4482046 - 4482102
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaa 226  Q
    |||||||||||||||| | |||||||||||| |||||||||||||||||| |||||||    
T  4482046 ggttaataggtttttacc-ccctgtaatatatgtcatttccggttttccccttgtaaa 4482102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 29309830 - 29309782
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  29309830 ggttaataggtttttacc-ccctgtaatataggtcatttccggttttccc 29309782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 25298846 - 25298991
Alignment:
Q  9 agtttgttatggttgttagctacttttaaacaaagatcgttagcttttgatcaattacttgatcagcaagtaatatacataagcttgtatgtaagtatga 108  Q
    ||||||||||| ||||||| ||||||||| ||| | | ||||| ||||||  ||||||||  | |||||||||| |||||| |||||||| ||  |||||    
T  25298846 agtttgttatgtttgttaggtacttttaagcaa-gtttgttag-ttttgaataattacttttttagcaagtaatgtacata-gcttgtatatacctatga 25298942  T
Q  109 tgtaaacacactttcattgataacgataataacaagtttacaatcaata 157  Q
    ||||||| || |||||||| ||| |  | |||||||||| |||||||||    
T  25298943 tgtaaacccaatttcattgttaatgtgagtaacaagttttcaatcaata 25298991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 3912257 - 3912316
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||| |||| |||| | |||||||||||||||||||||||||||||||  ||||||||    
T  3912257 ggttaacaggtctttacccccctgtaatataggtcatttccggttttccccctgtaaaat 3912316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 27543412 - 27543471
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||| |||| | |||||||||||||||||||| ||||||||||  ||||||||    
T  27543412 ggttaataggtctttacccccctgtaatataggtcattttcggttttccccctgtaaaat 27543471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 25277762 - 25277701
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc-ctttgtaaaatta 230  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||| | |||||||||||    
T  25277762 ggttaataggtctttacc-ccctgtaatataggtcatttccggttttccaccttgtaaaatta 25277701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 27198145 - 27198194
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccct 219  Q
    ||||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  27198145 ggttaataggtctttatc-ccctgtaatataggtcattttcggttttccct 27198194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 11830550 - 11830501
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||  ||||| | |||||||||||||||||||||||||||||||    
T  11830550 ggttaatagtgttttacccccctgtaatataggtcatttccggttttccc 11830501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 29309566 - 29309614
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  29309566 ggttaataggtctttacc-ccctgtaatataggtcatttccggttttccc 29309614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 960553 - 960506
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  960553 ggttaataggtctttacc-ccctgtaatataggtcatttccggttttcc 960506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 4482337 - 4482289
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    |||||||||||||||| | |||||||||||| ||||||| |||||||||    
T  4482337 ggttaataggtttttaaccccctgtaatataagtcattttcggttttcc 4482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 25567986 - 25568131
Alignment:
Q  9 agtttgttatggttgttagctacttttaaacaaagatcgttagcttttgatcaattacttgatcagcaagtaatatacataagcttgtatgtaagtatga 108  Q
    ||||| ||||| ||||||| ||||||||| ||||  | ||||| ||||||  ||||||||  | |||||||||| |||||| || ||||| |||||||||    
T  25567986 agtttcttatgtttgttaggtacttttaagcaaattt-gttag-ttttgagtaattacttttttagcaagtaatgtacata-gcatgtatataagtatga 25568082  T
Q  109 tgtaaacacactttcattgataacgataataacaagtttacaatcaata 157  Q
    ||||||  || |||||||| ||| |  ||||| |||||| |||||||||    
T  25568083 tgtaaatccaatttcattgctaatgtgaataaaaagttttcaatcaata 25568131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 25765389 - 25765534
Alignment:
Q  9 agtttgttatggttgttagctacttttaaacaaagatcgttagcttttgatcaattacttgatcagcaagtaatatacataagcttgtatgtaagtatga 108  Q
    ||||||||||| ||||||||||||||||| | ||| | ||||| ||||||  ||||||||  | |||||||||| ||||| ||||||||| ||  |||||    
T  25765389 agtttgttatgtttgttagctacttttaagc-aagtttgttag-ttttgaataattacttttttagcaagtaatgtacat-agcttgtatatacctatga 25765485  T
Q  109 tgtaaacacactttcattgataacgataataacaagtttacaatcaata 157  Q
    |||||||  | |||||||| ||| |  | |||||| ||| |||||||||    
T  25765486 tgtaaaccgaatttcattgttaatgtgactaacaaattttcaatcaata 25765534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 24970964 - 24971011
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttc 216  Q
    ||||||||||| |||| | |||||||||||| ||||||||||||||||    
T  24970964 ggttaataggtctttacccccctgtaatataagtcatttccggttttc 24971011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 24971234 - 24971175
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||| |||| | ||||||||||||| |||||||||||||| ||  ||||||||    
T  24971234 ggttaataggtctttacccccctgtaatatagatcatttccggtttttcccctgtaaaat 24971175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 30112951 - 30112912
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttc 208  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  30112951 ggttaataggtatttatccccctgtaatataggtcatttc 30112912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 12478574 - 12478620
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||| | ||||||||||||||||||||||||||||    
T  12478574 ggttaatagtgttttacccccctgtaatataggtcatttccggtttt 12478620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 12478929 - 12478899
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||||||||||||||||||    
T  12478929 ccctgtaatataggtcatttccggttttccc 12478899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 13567239 - 13567285
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||||||||||| || ||||||||| ||||||| |||||||    
T  13567239 ggttaataggtttttatccccttgtaatataagtcattttcggtttt 13567285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 17818131 - 17818089
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccgg 211  Q
    |||||||||  ||||||| ||||||||||||||||||||||||    
T  17818131 ggttaatagtgttttatccccctgtaatataggtcatttccgg 17818089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 25277473 - 25277522
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | |||||||||||| ||||||||||| ||||||    
T  25277473 ggttaataggtctttacccccctgtaatatatgtcatttccgggtttccc 25277522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 27543681 - 27543637
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttt 214  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||    
T  27543681 ggttaataggtctttacc-ccctgtaatataggtcatttccggttt 27543637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 32684562 - 32684611
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||  ||||| | |||||||||||| ||||||||||||||||||    
T  32684562 ggttaatagtcttttacccccctgtaatataagtcatttccggttttccc 32684611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 42406222 - 42406282
Alignment:
Q  167 aaggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||| |||| |||||| ||||||||||||||| |||||||||||| ||  ||||||||    
T  42406222 aaggttaacaggtctttatc-ccctgtaatataggttatttccggttttacccctgtaaaat 42406282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 3912518 - 3912478
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||||||||||||||| ||||||||||  ||||||||    
T  3912518 ccctgtaatataggtcattttcggttttccccctgtaaaat 3912478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 4100734 - 4100706
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  4100734 ccctgtaatataggtcatttccggttttc 4100706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 14329377 - 14329437
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| |||| | |||||||||||| |||||||| ||||||| |  |||||||||    
T  14329377 ggttaataggtctttagcgccctgtaatatatgtcatttctggttttctccctgtaaaatt 14329437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 14329656 - 14329609
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    ||||||||||| |||| | |||||||||||||||||||| |||||||||    
T  14329656 ggttaataggtctttacc-ccctgtaatataggtcattttcggttttcc 14329609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 18367298 - 18367270
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  18367298 ccctgtaatataggtcatttccggttttc 18367270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 23428755 - 23428795
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||||||||||||||| ||||||||||  ||||||||    
T  23428755 ccctgtaatataggtcatttgcggttttccccctgtaaaat 23428795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 30222125 - 30222085
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||||||||||||||| ||||||||||  ||||||||    
T  30222125 ccctgtaatataggtcattttcggttttccccctgtaaaat 30222085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 34662558 - 34662586
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  34662558 ccctgtaatataggtcatttccggttttc 34662586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 34820592 - 34820620
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  34820592 ccctgtaatataggtcatttccggttttc 34820620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 38500572 - 38500523
Alignment:
Q  166 taaggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    |||||||||||||| |||| |  ||||||||||||||||||| |||||||||    
T  38500572 taaggttaataggtctttacc--cctgtaatataggtcattttcggttttcc 38500523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 38703620 - 38703660
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||| |||||||||||||||||||||||  ||||||||    
T  38703620 ccctgtattataggtcatttccggttttccccctgtaaaat 38703660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 41509754 - 41509710
Alignment:
Q  171 ttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||  ||||| | ||||||||||||||||||||||||||||    
T  41509754 ttaatagtgttttacccccctgtaatataggtcatttccggtttt 41509710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 41565565 - 41565517
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    |||||||||||  ||| | || |||||||||||||||||||||||||||    
T  41565565 ggttaataggtccttacccccgtgtaatataggtcatttccggttttcc 41565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 47 - 160
Target Start/End: Complemental strand, 54916 - 54803
Alignment:
Q  47 gttagcttttgatcaattacttgatcagcaagtaatatacataagcttgtatgtaagtatgatgtaaacacactttcattgataacgataataacaagtt 146  Q
    ||||| |||||||  |||||||||||| |||||||| ||||||||||||||  ||||||||||||||||| |||||||||  ||| || |||||||||||    
T  54916 gttagtttttgattgattacttgatcaccaagtaatgtacataagcttgtaaataagtatgatgtaaacatactttcattcctaatgagaataacaagtt 54817  T
Q  147 tacaatcaatagtt 160  Q
    ||||||||||||||    
T  54816 tacaatcaatagtt 54803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 49880499 - 49880565
Alignment:
Q  164 tataaggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatta 230  Q
    |||| ||||||||||| |||||| |||| |||||||||||||||||||||| ||| |||||||||||    
T  49880499 tatagggttaataggtctttatccccctataatataggtcatttccggtttcccccttgtaaaatta 49880565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 5205117 - 5205166
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  5205117 ggttaataggtttttacccccctgtaatataggtcatttccggttttccc 5205166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 5205411 - 5205362
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  5205411 ggttaataggtttttacccccctgtaatataggtcatttccggttttccc 5205362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 4699976 - 4700024
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  4699976 ggttaataggtctttacctccctgtaatataggtcatttccggttttcc 4700024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 51252341 - 51252292
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  51252341 ggttaataggtctttatccccctgtaatataggtcatttctggttttccc 51252292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 8355623 - 8355564
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||| |||| | ||||||||||||||||||||| |||||||||  ||||||||    
T  8355623 ggttaataggtctttacccccctgtaatataggtcatttctggttttccccctgtaaaat 8355564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 30586163 - 30586210
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttc 216  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||    
T  30586163 ggttaataggtctttacccccctgtaatataggtcatttccggttttc 30586210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 7118088 - 7118137
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| ||||   |||||||||||||||||||||||||||||||    
T  7118088 ggttaataggtctttacacccctgtaatataggtcatttccggttttccc 7118137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 27760308 - 27760349
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||||||||||||| ||||||||| ||||||||||    
T  27760308 ccctgtaatataggtcatttctggttttccccttgtaaaatt 27760349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 42349067 - 42349018
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | || ||||||||||||||||||||||||||||    
T  42349067 ggttaataggtctttagccccatgtaatataggtcatttccggttttccc 42349018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 49873005 - 49872957
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  49873005 ggttaataggtctttacc-ccctgtaatataggtcatttccggttttccc 49872957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 10917332 - 10917449
Alignment:
Q  7 atagtttgttatggttgttagctacttttaaacaaagatcgttagcttttgatcaattacttgatcagcaagtaatatacataagcttgtatgtaagtat 106  Q
    |||||||  ||||| ||||||||| |||||| ||||| | |||||  |||| |  |||||||||| | |||||| | |  ||||| |||||| |||||||    
T  10917332 atagtttagtatggatgttagctatttttaagcaaagtttgttag--tttgtttgattacttgataaacaagtattgtgaataagtttgtatataagtat 10917429  T
Q  107 gatgtaaacacactttcatt 126  Q
    ||| ||||||||||||||||    
T  10917430 gatataaacacactttcatt 10917449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 5417320 - 5417278
Alignment:
Q  171 ttaataggtttttatctccctgtaatataggtcatttccggttt 214  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  5417320 ttaataggtttttacctcc-tgtaatataggtcatttccggttt 5417278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 300542 - 300496
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||| | ||||||||||||||||||||||||||||    
T  300542 ggttaatagtgttttacccccctgtaatataggtcatttccggtttt 300496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 5572336 - 5572282
Alignment:
Q  161 aattataaggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    ||||||| |||||||||  |||||   ||||||||||||||||||||||||||||    
T  5572336 aattatagggttaatagtgttttactcccctgtaatataggtcatttccggtttt 5572282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 14004253 - 14004291
Alignment:
Q  190 ctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  14004253 ctgtaatatatgtcatttccggttttccccttgtaaaat 14004291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Original strand, 14241233 - 14241263
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||||||||||||||||||    
T  14241233 ccctgtaatataggtcatttccggttttccc 14241263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 27432878 - 27432840
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcattt 207  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  27432878 ggttaataggtctttacctccctgtaatataggtcattt 27432840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 38442256 - 38442214
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc-cctttgtaaaatt 229  Q
    ||||||||||||||||||||||||||||| || ||||||||||    
T  38442256 ccctgtaatataggtcatttccggttttcgcccttgtaaaatt 38442214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 40816986 - 40816944
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc-cctttgtaaaatt 229  Q
    ||||||||||||||||||||||||||||| || ||||||||||    
T  40816986 ccctgtaatataggtcatttccggttttcgcccttgtaaaatt 40816944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 52839674 - 52839628
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||| | ||||||||||||||||||||||||||||    
T  52839674 ggttaatagtgttttacccccctgtaatataggtcatttccggtttt 52839628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 6510216 - 6510264
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||    
T  6510216 ggttaataggtctttacc-ccctgtaatataggtcatttccgattttccc 6510264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 18464954 - 18465003
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | |||||||| |||||||||||||| |||||||    
T  18464954 ggttaataggtctttagccccctgtaaaataggtcatttccgattttccc 18465003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 19624066 - 19624006
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc-ctttgtaaaatt 229  Q
    ||||||||||| |||||| | |||||||||||||||||| ||||||||| || |||||||||    
T  19624066 ggttaataggtctttatc-ctctgtaatataggtcattttcggttttcctctctgtaaaatt 19624006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 22949248 - 22949292
Alignment:
Q  170 gttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||    
T  22949248 gttaataggtctttacc-ccctgtaatataggtcatttccggtttt 22949292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 23626275 - 23626234
Alignment:
Q  188 ccctgtaatataggtcatttccggtttt-ccctttgtaaaat 228  Q
    |||||||||||||||||||||||||||| ||| |||||||||    
T  23626275 ccctgtaatataggtcatttccggttttaccccttgtaaaat 23626234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 49880793 - 49880749
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttt 214  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||    
T  49880793 ggttaataggtctttacc-ccctgtaatataggtcatttccggttt 49880749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 51252050 - 51252098
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| ||||||||||||||||| ||||| |||||||||    
T  51252050 ggttaataggtcttta-ctccctgtaatataggttatttctggttttccc 51252098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 5571964 - 5572000
Alignment:
Q  180 ttttatctccctgtaatataggtcatttccggttttc 216  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  5571964 ttttatccccctgtaatataggtcattttcggttttc 5572000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 7118356 - 7118324
Alignment:
Q  187 tccctgtaatataggtcatttccggttttccct 219  Q
    ||||||||||||||||||||| |||||||||||    
T  7118356 tccctgtaatataggtcattttcggttttccct 7118324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 10922529 - 10922646
Alignment:
Q  7 atagtttgttatggttgttagctacttttaaacaaagatcgttagcttttgatcaattacttgatcagcaagtaatatacataagcttgtatgtaagtat 106  Q
    |||||||  ||||| ||||||||| |||||| ||||| | |||||  |||| |  |||||||||| | |||||| | |  ||||| |||||| ||| |||    
T  10922529 atagtttagtatggatgttagctatttttaagcaaagtttgttag--tttgtttgattacttgataaacaagtattgtgaataagtttgtatataaatat 10922626  T
Q  107 gatgtaaacacactttcatt 126  Q
    ||||||||||| ||||||||    
T  10922627 gatgtaaacacgctttcatt 10922646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 25110117 - 25110070
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    ||||||||||| |||| | |||||||||||||||||||| |||||||||    
T  25110117 ggttaataggtcttta-caccctgtaatataggtcattttcggttttcc 25110070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 29224603 - 29224631
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  29224603 ccctgtaatataggtcatttccggttttc 29224631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 31797541 - 31797593
Alignment:
Q  167 aaggttaataggtttttatctccctgtaatataggtcatttccggttttccct 219  Q
    ||||||||||||| |||| | |||||||||||| ||||||| || ||||||||    
T  31797541 aaggttaataggtctttagccccctgtaatatatgtcattttcgattttccct 31797593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 38441006 - 38441034
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  38441006 ccctgtaatataggtcatttccggttttc 38441034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 38640417 - 38640445
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  38640417 ccctgtaatataggtcatttccggttttc 38640445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 47115618 - 47115559
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttc-cctttgtaaaat 228  Q
    ||||||||||| |||| | |||||||||||||||||||| |||||||| ||| ||||||||    
T  47115618 ggttaataggtctttacc-ccctgtaatataggtcattttcggttttctcctctgtaaaat 47115559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 1687 - 1542
Alignment:
Q  9 agtttgttatggttgttagctacttttaaacaaagatcgttagcttttgatcaattacttgatcagcaagtaatatacataagcttgtatgtaagtatga 108  Q
    ||||||||||| ||||||||||||||||| | ||| | ||||| ||||||  ||||||||  | |||||||||| ||||| ||||||||| ||  |||||    
T  1687 agtttgttatgtttgttagctacttttaagc-aagtttgttag-ttttgaataattacttttttagcaagtaatgtacat-agcttgtatatacctatga 1591  T
Q  109 tgtaaacacactttcattgataacgataataacaagtttacaatcaata 157  Q
    ||||||| || |||||||| ||| |  | |||||||||| |||||||||    
T  1590 tgtaaacccaatttcattgttaatgtgagtaacaagttttcaatcaata 1542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 20041192 - 20041144
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||    
T  20041192 ggttaataggtttttacccccctgtaatataggtcatttccggttttcc 20041144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 48104784 - 48104725
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| |||| |||| ||||||||||||||||| ||||||||||| |||||||||    
T  48104784 ggttaataggtctttacctcc-tgtaatataggtcattttcggttttccctctgtaaaatt 48104725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 15994815 - 15994769
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||    
T  15994815 ggttaatagtgttttatccccctgtaatataggtcatttccggtttt 15994769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 3951384 - 3951429
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttt 214  Q
    ||||||||||| |||||| | |||||||||||||||||||||||||    
T  3951384 ggttaataggtctttatccctctgtaatataggtcatttccggttt 3951429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 13797417 - 13797466
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | |||||||||||| ||||||||||||||||||    
T  13797417 ggttaataggtctttacccccctgtaatataagtcatttccggttttccc 13797466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 31864072 - 31864024
Alignment:
Q  181 tttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||||    
T  31864072 tttatccccctgtaatataggtcatttccggtttcccccctgtaaaatt 31864024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 38192963 - 38193023
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||| |  |||||||||    
T  38192963 ggttaataggtctttacccccctgtaatataggtcatttccgattttctccctgtaaaatt 38193023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 39580222 - 39580175
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  39580222 ggttaataggtctttacc-ccctgtaatataggtcatttccggttttcc 39580175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 1676454 - 1676407
Alignment:
Q  164 tataaggttaataggtttttatctccctgtaatataggtcatttccgg 211  Q
    |||| |||||||||||||||| | ||||||||||||||||| ||||||    
T  1676454 tatagggttaataggtttttacccccctgtaatataggtcacttccgg 1676407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 21443866 - 21443925
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||||  ||||||| |||||||||||| |||||||| |||||| ||| ||||||||    
T  21443866 ggttaatagtgttttatccccctgtaatataagtcatttctggtttttcctctgtaaaat 21443925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 24845633 - 24845687
Alignment:
Q  163 ttataaggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||| ||||||||||| |||| |||| ||||||||||||||||| ||||||||||    
T  24845633 ttatagggttaataggtctttacctcc-tgtaatataggtcattttcggttttccc 24845687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 44414135 - 44414075
Alignment:
Q  167 aaggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||||| |||| |  |||||||||||||||||||  |||||| |||||||||||||    
T  44414135 aaggttaataggtctttacc--cctgtaatataggtcatttatggtttttcctttgtaaaatt 44414075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 442535 - 442581
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||| | ||||||||||||||||||||||||||||    
T  442535 ggttaatagtgttttagccccctgtaatataggtcatttccggtttt 442581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 2240866 - 2240908
Alignment:
Q  186 ctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||| ||||||||||||||||||||||||||  ||||||||    
T  2240866 ctccctttaatataggtcatttccggttttccccctgtaaaat 2240908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Original strand, 2300841 - 2300871
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||||||||||||||||||    
T  2300841 ccctgtaatataggtcatttccggttttccc 2300871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 12180891 - 12180853
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcattt 207  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  12180891 ggttaataggtctttatccccctgtaatataggtcattt 12180853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 13263870 - 13263916
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||| | ||||||||||||||||||||||||||||    
T  13263870 ggttaatagtgttttacccccctgtaatataggtcatttccggtttt 13263916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 13638067 - 13638113
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||| | ||||||||||||||||||||||||||||    
T  13638067 ggttaatagtgttttacccccctgtaatataggtcatttccggtttt 13638113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 15720930 - 15720976
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||| | ||||||||||||||||||||||||||||    
T  15720930 ggttaatagtgttttacccccctgtaatataggtcatttccggtttt 15720976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 19272220 - 19272266
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    ||||||||||| |||| |||||| |||||||||||||||| ||||||    
T  19272220 ggttaataggtctttacctccctctaatataggtcatttctggtttt 19272266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 21522144 - 21522098
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||||| ||||||||||||||||||||||| ||||    
T  21522144 ggttaatagtgttttatccccctgtaatataggtcatttccgatttt 21522098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 24555957 - 24555912
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||||||||| | ||||||||||||||||||||| ||||||    
T  24555957 ggttaataggtttttacc-ccctgtaatataggtcatttctggtttt 24555912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 32946608 - 32946578
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||||||||||||||||||    
T  32946608 ccctgtaatataggtcatttccggttttccc 32946578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 47370153 - 47370199
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||| | ||||||||||||||||||||||||||||    
T  47370153 ggttaatagtgttttagccccctgtaatataggtcatttccggtttt 47370199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 13286922 - 13286873
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | || |||||||||||||||||| |||||||||    
T  13286922 ggttaataggtctttacccccttgtaatataggtcatttctggttttccc 13286873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 15037462 - 15037417
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttt 214  Q
    ||||||||||| |||| | ||||||||||||||||||||| |||||    
T  15037462 ggttaataggtctttacccccctgtaatataggtcatttctggttt 15037417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 33440885 - 33440926
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    |||||||||||| ||||||||||||||||||  |||||||||    
T  33440885 ccctgtaatatatgtcatttccggttttcccactgtaaaatt 33440926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 39065386 - 39065442
Alignment:
Q  171 ttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||| |||| | |||||||||||||||||||||||||||| ||  ||||||||    
T  39065386 ttaataggtctttacc-ccctgtaatataggtcatttccggtttttcccctgtaaaat 39065442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 47370527 - 47370478
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||  ||||| |||||||||||||||| ||||||| ||||||||    
T  47370527 ggttaatagtgttttacctccctgtaatataggccatttccagttttccc 47370478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 2301178 - 2301138
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||| |||||||||||||||||||||  ||||||||    
T  2301178 ccctgtaatgtaggtcatttccggttttccccctgtaaaat 2301138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 11685301 - 11685273
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  11685301 ccctgtaatataggtcatttccggttttc 11685273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 13286635 - 13286691
Alignment:
Q  173 aataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||| |||| | || ||||||||||||||||| ||||||||||  |||||||||    
T  13286635 aataggtctttacccccatgtaatataggtcattttcggttttccccctgtaaaatt 13286691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 21298005 - 21298060
Alignment:
Q  159 ttaattataaggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    ||||||| ||||||||||||| |||| | |||||||||||| ||||||| |||||||    
T  21298005 ttaattaaaaggttaataggtctttacc-ccctgtaatataagtcattttcggtttt 21298060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 24478043 - 24478083
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||||||||||||||||||||||| ||  ||||||||    
T  24478043 ccctgtaatataggtcatttccggtttttcccctgtaaaat 24478083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 42042934 - 42042906
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  42042934 ccctgtaatataggtcatttccggttttc 42042906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 46146060 - 46146096
Alignment:
Q  180 ttttatctccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||| || |||||    
T  46146060 ttttatctccctgtaatataggtcattttcgtttttc 46146096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 33658868 - 33658920
Alignment:
Q  166 taaggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  33658868 taaggttaataggtctttacccccctgtaatataggtcatttccggttttccc 33658920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 10976811 - 10976745
Alignment:
Q  161 aattataaggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||| ||||||||||| |||| | |||||||||||||||||||||||||||||||  ||||||||    
T  10976811 aattatagggttaataggtctttacc-ccctgtaatataggtcatttccggttttccccctgtaaaat 10976745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 39153417 - 39153476
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||  ||||||||    
T  39153417 ggttaataggtctttacccccctgtaatataggtcatttccggttttccccatgtaaaat 39153476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 31861492 - 31861552
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccgg-ttttccctttgtaaaatt 229  Q
    ||||||||||| |||||| |||||||||||||||||||||||| ||||||| ||||||||||    
T  31861492 ggttaataggtctttatc-ccctgtaatataggtcatttccggtttttccccttgtaaaatt 31861552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 39419008 - 39418959
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  39419008 ggttaataggtctttacccccctgtaatataggtcatttccggttttccc 39418959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 31920390 - 31920343
Alignment:
Q  181 tttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||| |||||||||||||||||||||||||||||||||  ||||||||    
T  31920390 tttacctccctgtaatataggtcatttccggttttccccctgtaaaat 31920343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 33659162 - 33659103
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||| |||| | || ||||||||||||||||||||||||||||  ||||||||    
T  33659162 ggttaataggtatttacccccttgtaatataggtcatttccggttttccccctgtaaaat 33659103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 711231 - 711297
Alignment:
Q  162 attataaggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||| ||||||||||| |||| | ||||||||||||||||||||  |||||||||  ||||||||    
T  711231 attatagggttaataggtctttacccccctgtaatataggtcatttatggttttccccctgtaaaat 711297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 6117957 - 6117908
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||  ||||| |||| ||||||||||||||||||||||||||||    
T  6117957 ggttaatagtgttttacctccatgtaatataggtcatttccggttttccc 6117908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 9227144 - 9227092
Alignment:
Q  166 taaggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||| ||||   ||||||||||||||||||||| |||||||||    
T  9227144 taaggttaataggtctttacacccctgtaatataggtcatttctggttttccc 9227092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 13924383 - 13924344
Alignment:
Q  189 cctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  13924383 cctgtaatataggtcatttccggtttttcctctgtaaaat 13924344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 22642385 - 22642330
Alignment:
Q  163 ttataaggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||| ||||||||||| |||| | | |||||||||||||||||||| ||||||||    
T  22642385 ttatagggttaataggtctttacccctctgtaatataggtcatttccagttttccc 22642330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 26243463 - 26243428
Alignment:
Q  181 tttatctccctgtaatataggtcatttccggttttc 216  Q
    |||||| |||||||||||||||||||||||||||||    
T  26243463 tttatccccctgtaatataggtcatttccggttttc 26243428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Original strand, 20960883 - 20960913
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||||||||||||||||||    
T  20960883 ccctgtaatataggtcatttccggttttccc 20960913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 26035122 - 26035092
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||||||||||||||||||    
T  26035122 ccctgtaatataggtcatttccggttttccc 26035092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 41123519 - 41123473
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||| | ||||||||||||||||||||||||||||    
T  41123519 ggttaatagtgttttacccccctgtaatataggtcatttccggtttt 41123473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 9005097 - 9005146
Alignment:
Q  166 taaggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||| |||||    
T  9005097 taaggttaatagtgttttatccccctttaatataggtcatttcccgtttt 9005146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 16504999 - 16504954
Alignment:
Q  173 aataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||| |||| | |||||||||||||||||||| ||||||||||    
T  16504999 aataggtctttacccccctgtaatataggtcattttcggttttccc 16504954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 20688792 - 20688856
Alignment:
Q  164 tataaggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    |||| ||| ||||||| |||| |||| ||||||||||||||||| ||||||| || ||||||||||    
T  20688792 tatatggtcaataggtctttacctcc-tgtaatataggtcattttcggtttttcccttgtaaaatt 20688856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 29754049 - 29754098
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||| | |||| | |||| ||||||||||||||||||||||||||    
T  29754049 ggttaatagatctttacccccctataatataggtcatttccggttttccc 29754098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 33053103 - 33053054
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | |||||||||||||| |||||| |||||||||    
T  33053103 ggttaataggtctttacccccctgtaatataggccatttcgggttttccc 33053054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 40339574 - 40339534
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  40339574 ccctataatataggtcatttccggttttccc-ttgtaaaatt 40339534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 2724730 - 2724702
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  2724730 ccctgtaatataggtcatttccggttttc 2724702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 12147909 - 12147969
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt-ccctttgtaaaat 228  Q
    |||||||||  ||||| | ||||||||||||||||||||| |||||| ||| |||||||||    
T  12147909 ggttaatagtgttttaccaccctgtaatataggtcatttctggttttaccccttgtaaaat 12147969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 25354568 - 25354540
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  25354568 ccctgtaatataggtcatttccggttttc 25354540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 35798739 - 35798692
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    ||||| ||||| |||||| |||||||||||||||||||| |||||||||    
T  35798739 ggttagtaggtctttatc-ccctgtaatataggtcattttcggttttcc 35798692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 41825064 - 41825092
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  41825064 ccctgtaatataggtcatttccggttttc 41825092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 28149722 - 28149663
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||  |||||||||    
T  28149722 ggttaataggtttttacc-ccctgtaatataggtcatttccggttttccccctgtaaaatt 28149663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 34635999 - 34635940
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||  ||||||||    
T  34635999 ggttaataggtctttacccccctgtaatataggtcatttccggttttccccctgtaaaat 34635940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 11839028 - 11839076
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||||    
T  11839028 ggttaatagtgttttatccccctgtaatataggtcatttccggttttcc 11839076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 10851749 - 10851699
Alignment:
Q  167 aaggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| | |||| |||||||||||||||||||||||||||||||||    
T  10851749 aaggttaatagatcttta-ctccctgtaatataggtcatttccggttttccc 10851699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 15543715 - 15543764
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||  ||||| | |||||||||||||||||||||||||||||||    
T  15543715 ggttaatagtgttttacccccctgtaatataggtcatttccggttttccc 15543764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 17328093 - 17328141
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  17328093 ggttaataggtctttacc-ccctgtaatataggtcatttccggttttccc 17328141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 20182265 - 20182313
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||||| |||||||||||||||||||| || |||||||    
T  20182265 ggttaataggtttttatc-ccctgtaatataggtcattttcgattttccc 20182313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 34635707 - 34635755
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  34635707 ggttaataggtctttacc-ccctgtaatataggtcatttccggttttccc 34635755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 37147552 - 37147600
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  37147552 ggttaataggtctttacc-ccctgtaatataggtcatttccggttttccc 37147600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 38949850 - 38949903
Alignment:
Q  162 attataaggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||| |||||||||  ||||| | ||||||||||||||||||||||||||||    
T  38949850 attatagggttaatagtgttttaaccccctgtaatataggtcatttccggtttt 38949903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 19641447 - 19641494
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  19641447 ggttaataggtctttacc-ccctgtaatataggtcatttccggttttcc 19641494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 19840040 - 19840087
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  19840040 ggttaataggtctttacc-ccctgtaatataggtcatttccggttttcc 19840087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 22535739 - 22535680
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| |||| |||| |||||||||||||||||| |||||||||  |||||||||    
T  22535739 ggttaataggtctttacctcc-tgtaatataggtcatttctggttttccccctgtaaaatt 22535680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 38385934 - 38385981
Alignment:
Q  167 aaggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    ||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  38385934 aaggttaataggtctttacc-ccctgtaatataggtcatttccggtttt 38385981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 6468059 - 6468117
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||| ||||||| | |||||||||||| |||||||||| |||||||| ||||||||    
T  6468059 ggttaataagtttttacc-ccctgtaatataagtcatttccgattttccctctgtaaaat 6468117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 22116150 - 22116204
Alignment:
Q  163 ttataaggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||| ||||||||||| |||| | |||||||||||||||||||| ||||||||||    
T  22116150 ttatagggttaataggtctttacc-ccctgtaatataggtcattttcggttttccc 22116204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 25103744 - 25103779
Alignment:
Q  181 tttatctccctgtaatataggtcatttccggttttc 216  Q
    |||||| |||||||||||||||||||||||||||||    
T  25103744 tttatccccctgtaatataggtcatttccggttttc 25103779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 758783 - 758753
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||||||||||||||||||    
T  758783 ccctgtaatataggtcatttccggttttccc 758753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 7894257 - 7894207
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccct 219  Q
    ||||||||| | |||| | | ||||||||||||||||||||||||||||||    
T  7894257 ggttaatagatctttacccctctgtaatataggtcatttccggttttccct 7894207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 18555577 - 18555623
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    ||||||||||| |||| | |||||||||||| |||||||||||||||    
T  18555577 ggttaataggtctttacccccctgtaatataagtcatttccggtttt 18555623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 19272663 - 19272708
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||    
T  19272663 ggttaatagtgttttatc-ccctgtaatataggtcatttccggtttt 19272708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 29949906 - 29949868
Alignment:
Q  190 ctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  29949906 ctgtaatataggtcatttccggttttccccctgtaaaat 29949868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 38950235 - 38950181
Alignment:
Q  164 tataaggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||| |||||||||  ||||| | |||||||||||||| ||||||||||||||||    
T  38950235 tatagggttaatagtgttttacccccctgtaatataggccatttccggttttccc 38950181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 40321447 - 40321485
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaa 226  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  40321447 ccctgtaatataggtcatttccgattttccctctgtaaa 40321485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 45464667 - 45464622
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||||    
T  45464667 ggttaataggtttttacctcc-tgtaatataggtcattttcggtttt 45464622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 18701551 - 18701611
Alignment:
Q  168 aggttaataggtttttatctccctgtaatataggtcatttccggttttccctt-tgtaaaat 228  Q
    |||||||||||| |||||| ||||||||||||||||||||  ||||||| ||| ||||||||    
T  18701551 aggttaataggtctttatc-ccctgtaatataggtcatttttggttttctcttctgtaaaat 18701611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 25227824 - 25227873
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| |  |||||||||||||||||||| |||||||||    
T  25227824 ggttaataggtctttaccctcctgtaatataggtcatttctggttttccc 25227873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 30371386 - 30371434
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  30371386 ggttaataggtcttta-ctccctgtaatataggtcatttttggttttccc 30371434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 37147844 - 37147795
Alignment:
Q  167 aaggttaataggtttttatctccctgtaatataggtcatttccggttttc 216  Q
    ||||||||||||| |||| | | ||||||||||||||||||| |||||||    
T  37147844 aaggttaataggtctttaccccactgtaatataggtcatttctggttttc 37147795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 41101048 - 41101019
Alignment:
Q  188 ccctgtaatataggtcatttccggttttcc 217  Q
    ||||||||||||||||||||||||||||||    
T  41101048 ccctgtaatataggtcatttccggttttcc 41101019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 22535455 - 22535514
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| |||| | |||| ||||||||||||||| ||||||| || ||||||||||    
T  22535455 ggttaataggtctttacc-ccctttaatataggtcattttcggtttttcccttgtaaaatt 22535514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 22829399 - 22829343
Alignment:
Q  164 tataaggttaataggtttttatctccctgtaatataggtcatttccggttttccctt 220  Q
    |||| ||||||||||| ||||||  ||||||||||| |||||||||| |||| ||||    
T  22829399 tatagggttaataggtctttatcctcctgtaatataagtcatttccgatttttcctt 22829343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 36528978 - 36529006
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  36528978 ccctgtaatataggtcatttccggttttc 36529006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 42631798 - 42631826
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  42631798 ccctgtaatataggtcatttccggttttc 42631826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 43440493 - 43440521
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  43440493 ccctgtaatataggtcatttccggttttc 43440521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 43441820 - 43441792
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  43441820 ccctgtaatataggtcatttccggttttc 43441792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 42736877 - 42736818
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||  |||||||||    
T  42736877 ggttaataggtctttatc-ccctgtaatataggtcatttccggttttccccctgtaaaatt 42736818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 35034351 - 35034305
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttc 216  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||    
T  35034351 ggttaataggtctttatc-ccctgtaatataggtcatttccggttttc 35034305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 2472391 - 2472452
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttc-cctttgtaaaatta 230  Q
    ||||||||||| |||| | ||||||||||||||||||||| ||||||| ||||||||||||||    
T  2472391 ggttaataggtctttaac-ccctgtaatataggtcatttctggttttcacctttgtaaaatta 2472452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 13154570 - 13154628
Alignment:
Q  159 ttaattataaggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    |||||| || ||||||||||| |||||| |||| |||||||||||||||||| ||||||    
T  13154570 ttaattttagggttaataggtctttatccccctataatataggtcatttccgattttcc 13154628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 24650837 - 24650969
Alignment:
Q  23 gttagctacttttaaacaaagatcgttagcttttgatcaattacttgatcagcaagtaatatacataagcttgtatgtaagtatgatgtaaacacacttt 122  Q
    ||||||||||||||| ||| | | ||||| |||||||   ||||||| | |||||| ||| |||||| |||||||| |||| || ||||||||||| |||    
T  24650837 gttagctacttttaagcaa-gtttgttagtttttgattggttacttgtttagcaagcaatgtacata-gcttgtatataaggattatgtaaacacatttt 24650934  T
Q  123 cattgataacgataataacaagtttacaatcaata 157  Q
    |||   ||| || ||||| ||||||||||||||||    
T  24650935 cataactaatgagaataataagtttacaatcaata 24650969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 8620249 - 8620200
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||| | |||| | |||||||||||||||||||||||||||||||    
T  8620249 ggttaatagatctttacccccctgtaatataggtcatttccggttttccc 8620200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 34360306 - 34360261
Alignment:
Q  164 tataaggttaataggtttttatctccctgtaatataggtcatttcc 209  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||    
T  34360306 tatagggttaataggtctttacctccctgtaatataggtcatttcc 34360261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 18458858 - 18458811
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  18458858 ggttaataggtctttacc-ccctgtaatataggtcatttccggttttcc 18458811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 22387164 - 22387204
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  22387164 ccctgtaatataggtcattttcggttttccccttgtaaaat 22387204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 23889696 - 23889736
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  23889696 ccctgtaatataggtcatttccggttttccccctgtaaaat 23889736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 27794650 - 27794590
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| |||| ||||||||||||||  ||||||| |||||||||  |||||||||    
T  27794650 ggttaataggtctttacctccctgtaatataaatcatttctggttttccccctgtaaaatt 27794590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 28724326 - 28724384
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||| |||| | |||||||| |||||||||||| |||||||||| ||||||||    
T  28724326 ggttaataggtctttacc-ccctgtaaaataggtcatttctggttttccctctgtaaaat 28724384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 33573938 - 33573891
Alignment:
Q  170 gttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    |||||||||| |||| |||||||||||||||||||||| || ||||||    
T  33573938 gttaataggtctttacctccctgtaatataggtcattttcgattttcc 33573891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Original strand, 10027775 - 10027805
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||||||||||||||||||    
T  10027775 ccctgtaatataggtcatttccggttttccc 10027805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 22604718 - 22604673
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||    
T  22604718 ggttaataggtctttaac-ccctgtaatataggtcatttccggtttt 22604673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 24987609 - 24987654
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||    
T  24987609 ggttaataggtctttacc-ccctgtaatataggtcatttccggtttt 24987654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 28797160 - 28797222
Alignment:
Q  169 ggttaataggtttttatctcc-ctgtaatataggtcatttccggttttccctttgtaaaatta 230  Q
    ||||||||||| |||| | || ||||||||||||||||||||||||||| |  ||||||||||    
T  28797160 ggttaataggtctttaccccctctgtaatataggtcatttccggttttctccctgtaaaatta 28797222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 46561377 - 46561435
Alignment:
Q  159 ttaattataaggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    |||||| ||||||||||| || |||| | || |||||||||||||||||| ||||||||    
T  46561377 ttaattttaaggttaatatgtctttacccccttgtaatataggtcatttctggttttcc 46561435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 10028033 - 10027985
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | ||||||||||||||||||||| |||||||||    
T  10028033 ggttaataggtctttacc-ccctgtaatataggtcatttctggttttccc 10027985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 305
Target Start/End: Original strand, 15336867 - 15336916
Alignment:
Q  256 accgagaataacctatattacagaaagtaaagacctattaatcctgaatt 305  Q
    ||||||||| ||||||||||||||   |||||||||||||||||| ||||    
T  15336867 accgagaatgacctatattacagaggataaagacctattaatccttaatt 15336916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 27794359 - 27794404
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttt 214  Q
    ||||||||||| |||| | |||| ||||||||||||||||||||||    
T  27794359 ggttaataggtctttacccccctataatataggtcatttccggttt 27794404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 28410915 - 28410975
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccg-gttttccctttgtaaaatt 229  Q
    ||||||||||| |||||| |||||||||||||||||||| ||  |||||||| |||||||||    
T  28410915 ggttaataggtctttatc-ccctgtaatataggtcattttcgatttttccctctgtaaaatt 28410975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 31532546 - 31532486
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccgg-ttttccctttgtaaaatt 229  Q
    ||||||||||| ||||||||| | |||||||||||||||| || |||||||| |||||||||    
T  31532546 ggttaataggtctttatctcc-tataatataggtcatttctggtttttccctctgtaaaatt 31532486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 1824543 - 1824515
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  1824543 ccctgtaatataggtcatttccggttttc 1824515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 7112780 - 7112729
Alignment:
Q  166 taaggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||| |||| | |||||||||||| |||||||| |||||||||    
T  7112780 taaggttaataggtctttacc-ccctgtaatatatgtcatttctggttttccc 7112729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 7610475 - 7610503
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  7610475 ccctgtaatataggtcatttccggttttc 7610503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 9439466 - 9439411
Alignment:
Q  161 aattataaggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    ||||||| ||||||||||| |||| | ||||||||||||||| | ||||||||||||    
T  9439466 aattatagggttaataggtctttacc-ccctgtaatataggttaattccggttttcc 9439411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 15234233 - 15234205
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  15234233 ccctgtaatataggtcatttccggttttc 15234205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 15790529 - 15790469
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| || | | ||||||||||||||||||||| ||||||| |  |||||||||    
T  15790529 ggttaataggtcttgacccccctgtaatataggtcatttctggttttcaccctgtaaaatt 15790469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 15880006 - 15879966
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||||||||||||  |||||||||| ||||||||    
T  15880006 ccctgtaatataggtcatttttggttttccctctgtaaaat 15879966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 16279250 - 16279278
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  16279250 ccctgtaatataggtcatttccggttttc 16279278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 21771078 - 21771038
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||||||||||||||||||| |||  ||||||||    
T  21771078 ccctgtaatataggtcatttccggtttcccccctgtaaaat 21771038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 31883815 - 31883775
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||||||| |||||||  |||||||||||||||||||    
T  31883815 ccctgtaatatatgtcatttttggttttccctttgtaaaat 31883775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 34748063 - 34748095
Alignment:
Q  186 ctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||||||||||||||||| |||||||    
T  34748063 ctccctgtaatataggtcatttccgattttccc 34748095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 47220910 - 47220973
Alignment:
Q  166 taaggttaataggtttttatctccctgtaatataggtcatttccgg-ttttccctttgtaaaatt 229  Q
    ||||||||||||||||||||| ||||| |||||| |||||||  || |||||| |||||||||||    
T  47220910 taaggttaataggtttttatc-ccctgcaatataagtcatttttggtttttccttttgtaaaatt 47220973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 3915 - 3974
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||  ||||||||    
T  3915 ggttaataggtctttacccccctgtaatataggtcatttccggttttccccctgtaaaat 3974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 4207 - 4159
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  4207 ggttaataggtctttacc-ccctgtaatataggtcatttccggttttccc 4159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 6811 - 6871
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| |||||| ||||||||||||||||||||  |||||||||  |||||||||    
T  6811 ggttaataggtctttatccccctgtaatataggtcatttatggttttccccctgtaaaatt 6871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 3593341 - 3593401
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| |||||  | || |||||||||||||||| ||||||||||||||||||||    
T  3593341 ggttaataggtatttattcctctataatataggtcatttctggttttccctttgtaaaatt 3593401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 19325893 - 19325835
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||| || |||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  19325893 ggttaatatgtctttatc-ccctgtaaaatatgtcatttccggttttccctttgtaaaat 19325835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 31852049 - 31851990
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||| |||| | |||||||||||||||||||| ||||||||||  ||||||||    
T  31852049 ggttaataggtctttacccccctgtaatataggtcattttcggttttccccctgtaaaat 31851990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 18591116 - 18591180
Alignment:
Q  163 ttataaggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||| |||||||||  ||||||| |||| ||||||||||||||||||||||||||  ||||||||    
T  18591116 ttatagggttaatagtgttttatc-ccctataatataggtcatttccggttttccccctgtaaaat 18591180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 31851759 - 31851807
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||||||||    
T  31851759 ggttaataggtctttatc-ccctgtaatataggtcattttcggttttccc 31851807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 30381559 - 30381614
Alignment:
Q  161 aattataaggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    |||| |||||||||||||| |||||| ||||||||||||||| |||| |||||||||    
T  30381559 aattctaaggttaataggtctttatc-ccctgtaatataggttattttcggttttcc 30381614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 21544515 - 21544456
Alignment:
Q  159 ttaattataaggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    |||| |||| |||||||||   |||| | |||||||||||||||||||||||||||||||    
T  21544515 ttaaatatagggttaatagtgctttacccccctgtaatataggtcatttccggttttccc 21544456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 1228032 - 1228002
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||||||||||||||||||    
T  1228032 ccctgtaatataggtcatttccggttttccc 1228002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 16659535 - 16659573
Alignment:
Q  190 ctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  16659535 ctgtaatataggtcatttccggttttccccctgtaaaat 16659573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 17158488 - 17158442
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||| | ||||||||||||||||||||||||||||    
T  17158488 ggttaatagtgttttacccccctgtaatataggtcatttccggtttt 17158442  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 21544131 - 21544177
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||| | ||||||||||||||||||||||||||||    
T  21544131 ggttaatagtgttttacccccctgtaatataggtcatttccggtttt 21544177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 22362619 - 22362665
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    |||||||||  ||||| |||| |||||||||||||||||||||||||    
T  22362619 ggttaatagtgttttacctccgtgtaatataggtcatttccggtttt 22362665  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 7922318 - 7922366
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||||| ||||||||||||||||||||  |||||||||    
T  7922318 ggttaataggtctttatc-ccctgtaatataggtcatttttggttttccc 7922366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 8238014 - 8237985
Alignment:
Q  188 ccctgtaatataggtcatttccggttttcc 217  Q
    ||||||||||||||||||||||||||||||    
T  8238014 ccctgtaatataggtcatttccggttttcc 8237985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 10344051 - 10344099
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | ||||||||||||||||||||| |||||||||    
T  10344051 ggttaataggtctttacc-ccctgtaatataggtcatttctggttttccc 10344099  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 26882408 - 26882379
Alignment:
Q  188 ccctgtaatataggtcatttccggttttcc 217  Q
    ||||||||||||||||||||||||||||||    
T  26882408 ccctgtaatataggtcatttccggttttcc 26882379  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 29942499 - 29942451
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | ||||||||||||||||||||| |||||||||    
T  29942499 ggttaataggtctttacc-ccctgtaatataggtcatttctggttttccc 29942451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 11536754 - 11536782
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  11536754 ccctgtaatataggtcatttccggttttc 11536782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 11562264 - 11562292
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  11562264 ccctgtaatataggtcatttccggttttc 11562292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 13728929 - 13728985
Alignment:
Q  161 aattataaggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    |||||||||||||||||   |||| |||||| ||||||| ||||||| |||||||||    
T  13728929 aattataaggttaatagtgctttacctccctataatatatgtcattttcggttttcc 13728985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 16840317 - 16840345
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  16840317 ccctgtaatataggtcatttccggttttc 16840345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 21180420 - 21180392
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  21180420 ccctgtaatataggtcatttccggttttc 21180392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 22794109 - 22794137
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  22794109 ccctgtaatataggtcatttccggttttc 22794137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 25400834 - 25400786
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttcc 217  Q
    ||||||||||| |||| | || ||||||||||||||||| |||||||||    
T  25400834 ggttaataggtctttacccccttgtaatataggtcattttcggttttcc 25400786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 30240585 - 30240613
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  30240585 ccctgtaatataggtcatttccggttttc 30240613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 32131894 - 32131866
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  32131894 ccctgtaatataggtcatttccggttttc 32131866  T

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Target: scaffold0070 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 21938 - 21823
Alignment:
Q  9 agtttgttatggttgttagctacttttaaacaaagatcgttagcttttgatcaattacttgatcagcaagtaatatacataagcttgtatgtaagtatga 108  Q
    ||||||||||| ||||||| ||||||||| ||| | | ||||| ||||||  |||||||   | |||||||||| |||||| |||||||| |||||||||    
T  21938 agtttgttatgtttgttaggtacttttaagcaa-gtttgttag-ttttgaataattactattttagcaagtaatgtacata-gcttgtatataagtatga 21842  T
Q  109 tgtaaacacactttcattg 127  Q
    ||||||| || ||||||||    
T  21841 tgtaaacccaatttcattg 21823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 8151 - 8092
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| |||| | | ||||||||||||||||||| ||||||||| ||||||||||    
T  8151 ggttaataggtctttacc-cactgtaatataggtcatttctggttttccccttgtaaaatt 8092  T

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Target: scaffold0450; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 7860 - 7919
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaatt 229  Q
    ||||||||||| |||| | |||||||||||| |||||||| |||||||||  |||||||||    
T  7860 ggttaataggtctttacc-ccctgtaatatatgtcatttctggttttccccctgtaaaatt 7919  T

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Target: scaffold0113 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 28072 - 28120
Alignment:
Q  170 gttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||||||| | |||||||||||||||||||||  ||||||||    
T  28072 gttaataggtttttacccccctgtaatataggtcatttcttgttttccc 28120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 28896 - 28937
Alignment:
Q  255 aaccgagaataacctatattacagaaagtaaagacctattaa 296  Q
    |||||| |||||||||||||||||||  ||||||||||||||    
T  28896 aaccgaaaataacctatattacagaagataaagacctattaa 28937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 34570 - 34629
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||| |||| | |  ||||||||||||||||||||||||||||  ||||||||    
T  34570 ggttaataggtctttacccctttgtaatataggtcatttccggttttccccctgtaaaat 34629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 34882 - 34824
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||| |||| | |||||||||||||||||||||| ||||||||  ||||||||    
T  34882 ggttaataggtctttacc-ccctgtaatataggtcatttccagttttccccctgtaaaat 34824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 2116 - 2069
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttc 216  Q
    ||||||||||| |||| | ||||||||||||||||||||| |||||||    
T  2116 ggttaataggtctttacccccctgtaatataggtcatttctggttttc 2069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 300
Target Start/End: Complemental strand, 38083 - 38049
Alignment:
Q  266 acctatattacagaaagtaaagacctattaatcct 300  Q
    |||||||||||||| ||||||||||||||||||||    
T  38083 acctatattacagagagtaaagacctattaatcct 38049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Original strand, 63051 - 63081
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||||||||||||||||||    
T  63051 ccctgtaatataggtcatttccggttttccc 63081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 4250 - 4298
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  4250 ggttaataggtcttta-ctccctgtaatataggtcatttatggttttccc 4298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 6748 - 6785
Alignment:
Q  191 tgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    ||||||||||||||||||||||||| || |||||||||    
T  6748 tgtaatataggtcatttccggttttacccttgtaaaat 6785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 26309 - 26357
Alignment:
Q  169 ggttaataggtttttatctccctgtaatataggtcatttccggttttccc 218  Q
    ||||||||||| |||| | |||||||||||||||||||| ||||||||||    
T  26309 ggttaataggtctttacc-ccctgtaatataggtcattttcggttttccc 26357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 44386 - 44437
Alignment:
Q  163 ttataaggttaataggtttttatctccctgtaatataggtcatttccggtttt 215  Q
    ||||||||||||||||| |||| | || ||||||||| |||||||||||||||    
T  44386 ttataaggttaataggtctttacc-ccttgtaatataagtcatttccggtttt 44437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 38633 - 38661
Alignment:
Q  190 ctgtaatataggtcatttccggttttccc 218  Q
    |||||||||||||||||||||||||||||    
T  38633 ctgtaatataggtcatttccggttttccc 38661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 23916 - 23944
Alignment:
Q  188 ccctgtaatataggtcatttccggttttc 216  Q
    |||||||||||||||||||||||||||||    
T  23916 ccctgtaatataggtcatttccggttttc 23944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 332084 - 332124
Alignment:
Q  188 ccctgtaatataggtcatttccggttttccctttgtaaaat 228  Q
    |||||||||||||||||||| ||||||||||  ||||||||    
T  332084 ccctgtaatataggtcattttcggttttccccctgtaaaat 332124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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