View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0830_low_126 (Length: 251)
Name: NF0830_low_126
Description: NF0830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0830_low_126 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 27 - 251
Target Start/End: Complemental strand, 28002 - 27778
Alignment:
| Q |
27 |
catatatgacatcgtggaccaacacaaacatcagactagtgattagtgaacatgagttgacattctgtgttttctgaggatcctgttgccttgagaaggc |
126 |
Q |
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| T |
28002 |
catatatgacatcgtggaccaacacaaacatcagactagtgattagtgaacatgagttgacattctgtgttttctgaggatcctgttgccttgagaaggc |
27903 |
T |
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| Q |
127 |
gttagtcagataccatgtttttacttactagggctgaatattgtgccagaatcatagtgaagcaatttggttagataatagtatacacactcacggattt |
226 |
Q |
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| T |
27902 |
gttagtcagataccatgtttttacttactagggctgaatattgtgccagaatcatagtgaagcaatttggttagataatagtatacacactcacggattt |
27803 |
T |
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| Q |
227 |
ttaacatctatctaaacatcaattc |
251 |
Q |
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| T |
27802 |
ttaacatctatctaaacatcaattc |
27778 |
T |
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