View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0830_low_147 (Length: 209)
Name: NF0830_low_147
Description: NF0830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0830_low_147 |
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Alignment Details
Target: chr5 (Bit Score: 117; Significance: 8e-60; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 16972587 - 16972711
Alignment:
| Q |
1 |
gtattctttctttctctttcttccacatgctctgtcactgttttttctcttaatccaacaatcttttctcactattaataatcacttcttaaatctactt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
16972587 |
gtattctttctttctctttcttccacatgctctgtcactgttttttctcttaatccaacaatctcttctcactattaataatcacttcttaaatctactt |
16972686 |
T |
|
| Q |
101 |
cttcaccattggattcatctcactc |
125 |
Q |
| |
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|||||||||||||||| |||||||| |
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|
| T |
16972687 |
cttcaccattggattcttctcactc |
16972711 |
T |
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