View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0830_low_59 (Length: 392)

Name: NF0830_low_59
Description: NF0830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0830_low_59
NF0830_low_59
[»] chr8 (32 HSPs)
chr8 (155-291)||(33850904-33851040)
chr8 (155-291)||(5576134-5576270)
chr8 (156-291)||(42936794-42936929)
chr8 (155-291)||(10391694-10391830)
chr8 (157-291)||(24501324-24501458)
chr8 (156-289)||(32711129-32711262)
chr8 (155-291)||(26373871-26374006)
chr8 (156-291)||(7506439-7506574)
chr8 (157-291)||(23114771-23114905)
chr8 (156-261)||(24214690-24214795)
chr8 (155-291)||(42937965-42938092)
chr8 (157-291)||(43960031-43960156)
chr8 (159-240)||(41479769-41479850)
chr8 (155-226)||(42734815-42734886)
chr8 (156-240)||(37915528-37915612)
chr8 (155-262)||(39189450-39189557)
chr8 (178-262)||(33971920-33972004)
chr8 (159-262)||(29930308-29930411)
chr8 (156-223)||(13477816-13477883)
chr8 (239-291)||(42734880-42734932)
chr8 (155-223)||(18305077-18305144)
chr8 (155-226)||(16365301-16365371)
chr8 (154-223)||(4030442-4030511)
chr8 (157-206)||(18306589-18306638)
chr8 (154-223)||(37857903-37857972)
chr8 (155-223)||(14781248-14781315)
chr8 (155-223)||(18957834-18957901)
chr8 (155-223)||(32498918-32498985)
chr8 (161-192)||(26373780-26373811)
chr8 (156-223)||(44724898-44724964)
chr8 (152-222)||(9287603-9287673)
chr8 (156-205)||(4403592-4403641)
[»] chr3 (51 HSPs)
chr3 (155-291)||(3999148-3999284)
chr3 (155-291)||(995483-995619)
chr3 (155-291)||(33995990-33996126)
chr3 (156-291)||(19254446-19254581)
chr3 (159-291)||(54626047-54626179)
chr3 (157-291)||(33807165-33807299)
chr3 (155-291)||(44761618-44761754)
chr3 (161-291)||(20498768-20498898)
chr3 (161-291)||(51699054-51699184)
chr3 (154-291)||(29448435-29448571)
chr3 (156-291)||(6590052-6590187)
chr3 (161-291)||(6131014-6131144)
chr3 (156-291)||(10138725-10138860)
chr3 (156-291)||(25418927-25419053)
chr3 (156-291)||(35338242-35338377)
chr3 (152-262)||(6976188-6976298)
chr3 (155-288)||(16008098-16008222)
chr3 (158-291)||(40247300-40247424)
chr3 (155-262)||(7319068-7319174)
chr3 (155-240)||(53928648-53928733)
chr3 (154-262)||(15492403-15492511)
chr3 (155-262)||(50899252-50899359)
chr3 (163-225)||(1439521-1439583)
chr3 (158-262)||(46174720-46174824)
chr3 (155-262)||(45135687-45135794)
chr3 (155-291)||(52080518-52080649)
chr3 (155-262)||(539340-539444)
chr3 (167-258)||(5826001-5826091)
chr3 (157-226)||(6034692-6034761)
chr3 (156-205)||(12108120-12108169)
chr3 (174-225)||(52115130-52115181)
chr3 (167-232)||(28145618-28145684)
chr3 (166-218)||(38772534-38772586)
chr3 (155-226)||(52617087-52617157)
chr3 (237-291)||(3205599-3205653)
chr3 (156-222)||(37820323-37820389)
chr3 (156-205)||(39842119-39842168)
chr3 (155-255)||(46749965-46750064)
chr3 (155-223)||(31645364-31645431)
chr3 (155-223)||(36673260-36673327)
chr3 (155-190)||(54629912-54629947)
chr3 (159-221)||(10661216-10661278)
chr3 (161-262)||(12104046-12104148)
chr3 (152-221)||(27593967-27594036)
chr3 (242-291)||(37820392-37820441)
chr3 (158-223)||(51736870-51736935)
chr3 (242-291)||(53928726-53928775)
chr3 (155-223)||(11432574-11432641)
chr3 (157-221)||(20833927-20833990)
chr3 (161-201)||(44277677-44277717)
chr3 (154-259)||(45925783-45925890)
[»] chr1 (40 HSPs)
chr1 (155-291)||(6303775-6303911)
chr1 (155-291)||(49197761-49197897)
chr1 (155-288)||(19451281-19451414)
chr1 (156-291)||(956030-956165)
chr1 (155-284)||(35280235-35280364)
chr1 (155-291)||(28823882-28824018)
chr1 (155-291)||(45759458-45759594)
chr1 (155-291)||(730645-730781)
chr1 (155-291)||(47781216-47781353)
chr1 (161-291)||(47653843-47653974)
chr1 (156-282)||(31571845-31571971)
chr1 (155-291)||(35678761-35678895)
chr1 (156-291)||(50192072-50192207)
chr1 (154-255)||(29209444-29209544)
chr1 (156-291)||(49418538-49418664)
chr1 (162-226)||(37014327-37014391)
chr1 (156-240)||(48525094-48525178)
chr1 (156-262)||(31622268-31622374)
chr1 (155-226)||(47784806-47784877)
chr1 (155-259)||(1923096-1923200)
chr1 (156-226)||(32588244-32588313)
chr1 (157-217)||(29556579-29556639)
chr1 (200-291)||(45536560-45536651)
chr1 (161-259)||(42658579-42658677)
chr1 (216-291)||(21222722-21222797)
chr1 (167-226)||(46601414-46601473)
chr1 (159-199)||(33026172-33026212)
chr1 (152-223)||(49232011-49232081)
chr1 (157-262)||(26284305-26284410)
chr1 (155-223)||(28386558-28386626)
chr1 (155-223)||(6313603-6313670)
chr1 (155-223)||(25613119-25613186)
chr1 (155-223)||(29395538-29395605)
chr1 (241-291)||(33085441-33085491)
chr1 (154-259)||(19350238-19350343)
chr1 (197-262)||(27199066-27199131)
chr1 (155-223)||(9321619-9321687)
chr1 (183-235)||(17994423-17994473)
chr1 (154-190)||(48176645-48176681)
chr1 (155-223)||(51702621-51702688)
[»] chr7 (51 HSPs)
chr7 (155-291)||(12893918-12894054)
chr7 (155-291)||(44343001-44343137)
chr7 (157-291)||(7718802-7718936)
chr7 (155-291)||(18916444-18916580)
chr7 (155-291)||(40996129-40996265)
chr7 (156-291)||(43392026-43392161)
chr7 (157-291)||(7717871-7718005)
chr7 (154-291)||(39218881-39219018)
chr7 (155-291)||(47879662-47879798)
chr7 (155-291)||(47914740-47914876)
chr7 (155-291)||(8078620-8078756)
chr7 (156-291)||(727947-728082)
chr7 (156-291)||(977332-977467)
chr7 (156-290)||(31401895-31402029)
chr7 (155-291)||(43580616-43580751)
chr7 (156-291)||(34695829-34695964)
chr7 (155-291)||(30441669-30441809)
chr7 (161-291)||(34009524-34009645)
chr7 (156-291)||(7113899-7114025)
chr7 (156-288)||(20274900-20275022)
chr7 (155-221)||(12964031-12964097)
chr7 (156-262)||(19811093-19811199)
chr7 (155-262)||(3796702-3796809)
chr7 (158-240)||(835047-835129)
chr7 (158-240)||(1200227-1200309)
chr7 (156-217)||(9180353-9180414)
chr7 (158-226)||(448245-448313)
chr7 (154-259)||(3635118-3635223)
chr7 (169-262)||(43186961-43187054)
chr7 (155-223)||(10068948-10069016)
chr7 (163-255)||(10617374-10617466)
chr7 (162-224)||(43679777-43679839)
chr7 (157-261)||(19252018-19252121)
chr7 (156-202)||(31639220-31639266)
chr7 (158-221)||(46121680-46121744)
chr7 (236-291)||(31639156-31639211)
chr7 (157-223)||(29613906-29613972)
chr7 (155-221)||(29893985-29894051)
chr7 (155-223)||(9881401-9881467)
chr7 (155-223)||(23102318-23102385)
chr7 (155-259)||(40098468-40098571)
chr7 (155-223)||(40459833-40459901)
chr7 (156-223)||(12741400-12741467)
chr7 (183-226)||(44622925-44622968)
chr7 (155-223)||(3023952-3024018)
chr7 (211-260)||(10676302-10676351)
chr7 (155-223)||(39785123-39785192)
chr7 (155-223)||(28343337-28343404)
chr7 (183-235)||(28762894-28762944)
chr7 (155-223)||(30823614-30823681)
chr7 (158-222)||(37971509-37971572)
[»] chr6 (20 HSPs)
chr6 (155-291)||(6196940-6197076)
chr6 (155-291)||(2300149-2300285)
chr6 (185-291)||(29077218-29077324)
chr6 (185-291)||(29112190-29112296)
chr6 (156-291)||(1392148-1392274)
chr6 (158-260)||(7052367-7052469)
chr6 (154-262)||(23929302-23929410)
chr6 (156-236)||(3608041-3608121)
chr6 (155-213)||(10344926-10344984)
chr6 (157-226)||(2238986-2239055)
chr6 (155-259)||(30878780-30878884)
chr6 (156-201)||(5160950-5160995)
chr6 (239-291)||(2238940-2238992)
chr6 (173-259)||(8634703-8634789)
chr6 (156-192)||(29114867-29114903)
chr6 (155-223)||(31068447-31068514)
chr6 (156-223)||(14261552-14261618)
chr6 (230-282)||(25839837-25839889)
chr6 (155-223)||(30384172-30384239)
chr6 (155-219)||(31896668-31896731)
[»] chr4 (59 HSPs)
chr4 (155-291)||(22202605-22202741)
chr4 (159-291)||(25331625-25331757)
chr4 (156-291)||(55975098-55975233)
chr4 (157-291)||(41880594-41880728)
chr4 (156-291)||(7007829-7007964)
chr4 (155-291)||(34228160-34228296)
chr4 (158-291)||(30009296-30009429)
chr4 (163-291)||(47599289-47599417)
chr4 (152-255)||(25446649-25446752)
chr4 (156-291)||(40536566-40536701)
chr4 (156-291)||(42787154-42787289)
chr4 (157-291)||(3437070-3437204)
chr4 (155-291)||(32952177-32952313)
chr4 (155-291)||(24130461-24130588)
chr4 (156-291)||(27453708-27453843)
chr4 (162-287)||(39479133-39479258)
chr4 (156-244)||(7246547-7246635)
chr4 (156-291)||(23465437-23465573)
chr4 (156-291)||(28542035-28542161)
chr4 (161-291)||(46635241-46635362)
chr4 (155-240)||(31314423-31314508)
chr4 (156-240)||(37046093-37046177)
chr4 (156-288)||(41321242-41321365)
chr4 (156-291)||(49469760-49469886)
chr4 (155-262)||(5104929-5105036)
chr4 (155-262)||(44770484-44770591)
chr4 (157-255)||(26340557-26340654)
chr4 (154-262)||(11090759-11090868)
chr4 (155-255)||(42721943-42722042)
chr4 (156-291)||(16020604-16020725)
chr4 (155-262)||(20021924-20022031)
chr4 (157-260)||(41581433-41581536)
chr4 (159-225)||(8712363-8712429)
chr4 (212-291)||(1113677-1113756)
chr4 (158-259)||(9163671-9163773)
chr4 (157-259)||(28371399-28371501)
chr4 (180-262)||(36478837-36478919)
chr4 (155-267)||(21309040-21309152)
chr4 (155-226)||(45341595-45341665)
chr4 (162-224)||(7249548-7249610)
chr4 (155-205)||(12913886-12913936)
chr4 (157-225)||(1045321-1045390)
chr4 (155-259)||(37369432-37369535)
chr4 (159-262)||(7853813-7853916)
chr4 (200-262)||(16019850-16019912)
chr4 (155-205)||(28099684-28099734)
chr4 (155-205)||(36727579-36727629)
chr4 (156-221)||(32323098-32323163)
chr4 (155-223)||(5442418-5442485)
chr4 (155-223)||(27769091-27769158)
chr4 (155-223)||(32683135-32683202)
chr4 (155-223)||(48262102-48262169)
chr4 (156-203)||(19740811-19740857)
chr4 (154-205)||(56444378-56444429)
chr4 (242-291)||(31314501-31314550)
chr4 (242-291)||(37046170-37046219)
chr4 (156-221)||(49833973-49834038)
chr4 (154-190)||(23988256-23988292)
chr4 (155-223)||(54342174-54342241)
[»] chr5 (24 HSPs)
chr5 (158-291)||(33655584-33655717)
chr5 (155-291)||(21147690-21147826)
chr5 (157-291)||(7016268-7016402)
chr5 (156-291)||(4771768-4771903)
chr5 (156-282)||(27458680-27458806)
chr5 (155-291)||(5272438-5272574)
chr5 (155-291)||(139760-139897)
chr5 (155-291)||(849843-849970)
chr5 (159-291)||(43319232-43319355)
chr5 (164-291)||(6461290-6461408)
chr5 (163-226)||(43319588-43319651)
chr5 (157-259)||(9839977-9840079)
chr5 (155-259)||(28593000-28593104)
chr5 (160-262)||(8408687-8408789)
chr5 (208-289)||(32157573-32157654)
chr5 (155-223)||(4239580-4239648)
chr5 (158-262)||(9688372-9688476)
chr5 (155-223)||(13999214-13999282)
chr5 (156-223)||(30581995-30582061)
chr5 (155-222)||(40012817-40012884)
chr5 (155-222)||(7947134-7947200)
chr5 (154-221)||(13717124-13717190)
chr5 (175-262)||(28346554-28346640)
chr5 (155-223)||(13926959-13927027)
[»] chr2 (34 HSPs)
chr2 (155-291)||(24776836-24776972)
chr2 (155-291)||(21136589-21136725)
chr2 (155-291)||(22551374-22551510)
chr2 (155-291)||(32125808-32125944)
chr2 (155-291)||(44766416-44766552)
chr2 (161-291)||(31170101-31170231)
chr2 (155-291)||(35317649-35317785)
chr2 (161-291)||(14198189-14198319)
chr2 (155-284)||(16270318-16270448)
chr2 (156-291)||(9120653-9120788)
chr2 (161-282)||(1789960-1790081)
chr2 (156-291)||(305097-305231)
chr2 (156-291)||(43848139-43848274)
chr2 (154-291)||(12407916-12408044)
chr2 (154-291)||(12419976-12420104)
chr2 (155-225)||(20605528-20605598)
chr2 (154-255)||(11997193-11997293)
chr2 (168-259)||(26600881-26600972)
chr2 (155-259)||(20156344-20156448)
chr2 (159-253)||(10124997-10125091)
chr2 (154-259)||(34027516-34027621)
chr2 (155-255)||(1188676-1188776)
chr2 (196-259)||(21988247-21988310)
chr2 (173-262)||(13436091-13436180)
chr2 (155-223)||(3464614-3464681)
chr2 (155-223)||(18178299-18178366)
chr2 (155-215)||(21988327-21988386)
chr2 (155-223)||(26789812-26789879)
chr2 (155-190)||(33136656-33136691)
chr2 (163-221)||(8173784-8173842)
chr2 (157-223)||(43079510-43079576)
chr2 (155-223)||(379935-380004)
chr2 (154-223)||(28845605-28845673)
chr2 (155-223)||(25289182-25289249)
[»] scaffold0151 (2 HSPs)
scaffold0151 (156-291)||(24533-24668)
scaffold0151 (218-291)||(37112-37185)
[»] scaffold0400 (1 HSPs)
scaffold0400 (168-291)||(14593-14716)
[»] scaffold0365 (1 HSPs)
scaffold0365 (168-291)||(15236-15359)
[»] scaffold0113 (1 HSPs)
scaffold0113 (156-291)||(37666-37792)
[»] scaffold0287 (1 HSPs)
scaffold0287 (154-259)||(10862-10967)
[»] scaffold0054 (1 HSPs)
scaffold0054 (156-223)||(36401-36468)
[»] scaffold0276 (1 HSPs)
scaffold0276 (242-291)||(213-262)
[»] scaffold0940 (1 HSPs)
scaffold0940 (155-223)||(3574-3641)


Alignment Details
Target: chr8 (Bit Score: 117; Significance: 2e-59; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 33851040 - 33850904
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  33851040 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgatttta 33850941  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  33850940 aaagactattaaggatttcaatggatttaattcataa 33850904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 5576134 - 5576270
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||||||||||||    
T  5576134 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttggggattttaaaagactttgcaagattttgacgactttgatgatttta 5576233  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  5576234 aaagactattaaagatttcaatggatttaattcataa 5576270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 42936794 - 42936929
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |    
T  42936794 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttga 42936893  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||||||||| ||||||||    
T  42936894 aagactattaaggatttcaatggatttaattcataa 42936929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 10391694 - 10391830
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  10391694 ggggtgtattggattagaattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgatttta 10391793  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  10391794 aaagactattaaggatttcaatggatttaattcataa 10391830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 157 - 291
Target Start/End: Original strand, 24501324 - 24501458
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaa 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  24501324 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaaatcttgaggattttaaaagattttgcaagattttgatgactttgatgattttaaa 24501423  T
Q  257 agactactaaagatttcaatggattttattcataa 291  Q
    |||||| ||| ||||||||| ||||| ||||||||    
T  24501424 agactattaaggatttcaattgatttaattcataa 24501458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 156 - 289
Target Start/End: Original strand, 32711129 - 32711262
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  32711129 gggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 32711228  T
Q  256 aagactactaaagatttcaatggattttattcat 289  Q
    ||||||| ||| ||||||||| ||||| ||||||    
T  32711229 aagactattaaggatttcaatagatttaattcat 32711262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 26373871 - 26374006
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||||||||||||||||||||||||    
T  26373871 ggggtgtactggattaggattttaaaggacaatttttgtttaaaaaagtcttgaagattttaaaa-actttgcaagattttgatgactttgatgatttta 26373969  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  26373970 aaagactattaaggatttcaatggatttaattcataa 26374006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 7506439 - 7506574
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||| | ||||||||||||||    
T  7506439 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttaaggattttaaaagactttgatagattttgattaatttgatgattttaa 7506538  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    |||| || ||| ||||||||||||||| ||||||||    
T  7506539 aagattattaaggatttcaatggatttaattcataa 7506574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 157 - 291
Target Start/End: Original strand, 23114771 - 23114905
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaa 256  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||  |||| ||||| |||||||||||||||    
T  23114771 ggtgtattagattaggattttaaaggacaatttttgtttaaaaaagttttgaggattttaaaagacttgggaggatttggatgattttgatgattttaaa 23114870  T
Q  257 agactactaaagatttcaatggattttattcataa 291  Q
    |||||| ||| ||||||||||||||| ||||||||    
T  23114871 agactattaaggatttcaatggatttaattcataa 23114905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 24214690 - 24214795
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  24214690 gggtgtattgaattaggattttaaaagacaatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 24214789  T
Q  256 aagact 261  Q
    ||||||    
T  24214790 aagact 24214795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 42938092 - 42937965
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||         || |||||||||||||    
T  42938092 ggggtgtattggattaggattttaatggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaa---------gattttgatgatttta 42938002  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  42938001 aaagactattaaggatttcaatggatttaattcataa 42937965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 157 - 291
Target Start/End: Complemental strand, 43960156 - 43960031
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaa 256  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||         || || |||||||||||||||    
T  43960156 ggtgtattggactaggattttaaaggacaatttttgtttaaaaaaatcttgaagattttaaaagactttg---------gaggattttgatgattttaaa 43960066  T
Q  257 agactactaaagatttcaatggattttattcataa 291  Q
    |||||| ||| ||||||||||||||| ||||||||    
T  43960065 agactattaaggatttcaatggatttaattcataa 43960031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 41479850 - 41479769
Alignment:
Q  159 tgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatga 240  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  41479850 tgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgtaagattttgatga 41479769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 42734815 - 42734886
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttg 226  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42734815 ggggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttg 42734886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 37915612 - 37915528
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatga 240  Q
    |||| |||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||| ||||| |||||    
T  37915612 gggtatattggattaggattttaaatgacaatttttgtttaaaaaattctagaggattttaaaagactttggagaatttggatga 37915528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 155 - 262
Target Start/End: Original strand, 39189450 - 39189557
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||| ||||||||||||||||||||||||| | ||||||||||||  | |||||||||||| |||| |  ||||| |||||||| |||||||||    
T  39189450 ggggtgtattagattaggattttaaaggacaattttagcttaaaaaagtctcaaagattttaaaagattttgtaggattttaatgactttcatgatttta 39189549  T
Q  255 aaagacta 262  Q
    ||||||||    
T  39189550 aaagacta 39189557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 33971920 - 33972004
Alignment:
Q  178 aaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagacta 262  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| || | |||||| |||||||||||| |||||||||||||    
T  33971920 aaaggacaatttttatttaaaaaagtcttaaggattttaaaagactctgcagaattttaatgactttgatggttttaaaagacta 33972004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 29930308 - 29930411
Alignment:
Q  159 tgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaag 258  Q
    |||| |||||||||||||||||||| |||||||||||||||||||| |  ||||||||||||| |||| |  ||||| | ||||||  | ||||||||||    
T  29930308 tgtactggattaggattttaaaggataatttttgtttaaaaaagtcatttggattttaaaagattttgtaggattttaacgactttagtaattttaaaag 29930407  T
Q  259 acta 262  Q
    ||||    
T  29930408 acta 29930411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 13477816 - 13477883
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| || |  | |||||||||||||    
T  13477816 gggtgtattggattaggattttaaaggataatttttgtttaaaaaactcataggaattttaaaagact 13477883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 42734880 - 42734932
Alignment:
Q  239 gactttgatgattttaaaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  42734880 gactttgatgattttaaaagactattaaggatttcaatggatttaattcataa 42734932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 18305077 - 18305144
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||||| ||||  | ||||||||||| | ||||||||||||||    
T  18305077 ggggtgtattggattaggattttaaaagacaa-ttttaataaaaaaagtctttaagattttaaaagact 18305144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 16365371 - 16365301
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttg 226  Q
    ||||||||||| |||||||||||||| ||||| ||||  | ||||||||||| | |||||||||||||||||    
T  16365371 ggggtgtattgaattaggattttaaaagacaa-ttttaataaaaaaagtctttaagattttaaaagactttg 16365301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 4030442 - 4030511
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    ||||||||||| ||||||||||||||| ||| |||||  |  ||||||||||| | ||||||||||||||    
T  4030442 aggggtgtattagattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagact 4030511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 18306589 - 18306638
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtctt 206  Q
    ||||||||  ||||||||||||||||||||| |||||||||||| |||||    
T  18306589 ggtgtattcaattaggattttaaaggacaatatttgtttaaaaatgtctt 18306638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 37857972 - 37857903
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    ||||||||||||||||||||||||||| ||| |||||  |  ||||||| ||| | ||||||||||||||    
T  37857972 aggggtgtattggattaggattttaaaagactattttaataaaaaaaagactttaagattttaaaagact 37857903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 14781248 - 14781315
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  14781248 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 14781315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 18957834 - 18957901
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  18957834 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 18957901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 32498985 - 32498918
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  32498985 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 32498918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 161 - 192
Target Start/End: Complemental strand, 26373811 - 26373780
Alignment:
Q  161 tattggattaggattttaaaggacaatttttg 192  Q
    ||||||||||||||||||||||||||||||||    
T  26373811 tattggattaggattttaaaggacaatttttg 26373780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 44724898 - 44724964
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    ||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  44724898 gggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 44724964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 9287603 - 9287673
Alignment:
Q  152 agaggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagac 222  Q
    |||| |||||||||||||||||||||||| ||| |||||  |  |||||| |||| | |||||||||||||    
T  9287603 agagaggtgtattggattaggattttaaaagactattttaataaaaaaaaatctttaagattttaaaagac 9287673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 4403641 - 4403592
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtct 205  Q
    |||||||||| |||| |||||||||||| ||||| || ||||||||||||    
T  4403641 gggtgtattgaattatgattttaaaggataatttgtgcttaaaaaagtct 4403592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 3999148 - 3999284
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  3999148 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgatttta 3999247  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  3999248 aaagactattaaggatttcaatggatttaattcataa 3999284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 995483 - 995619
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  995483 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaaatcttgaggattttaaaagactttgcaagattttgatgactttgatgatttta 995582  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  995583 aaagactattaaggatttcaatggatttaattcataa 995619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 33995990 - 33996126
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  33995990 ggggtgtattggattaagattttaaaggacaatttttgtttaaaaaagtcttgagaattttaaaagactttgcaaaattttgatgactttgatgatttta 33996089  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  33996090 aaagactattaaggatttcaatggatttaattcataa 33996126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 19254581 - 19254446
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||    
T  19254581 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaagattttaaaagactttgcaagattttgatgactttgatgattttaa 19254482  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||||||||| ||||||||    
T  19254481 aagactattaaggatttcaatggatttaattcataa 19254446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 159 - 291
Target Start/End: Complemental strand, 54626179 - 54626047
Alignment:
Q  159 tgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaag 258  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  54626179 tgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaag 54626080  T
Q  259 actactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||||||||||||||| ||||||||    
T  54626079 actactaaggatttcaatggatttaattcataa 54626047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 157 - 291
Target Start/End: Original strand, 33807165 - 33807299
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaa 256  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  33807165 ggtgtattggattaggattttaaaggacaatttttatttaaaaaagtcttgaggattttaaaagattttgcaagattttgatgactttgatgattttaaa 33807264  T
Q  257 agactactaaagatttcaatggattttattcataa 291  Q
    |||||| ||| ||||||||||||||| ||||||||    
T  33807265 agactattaaggatttcaatggatttaattcataa 33807299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 44761618 - 44761754
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  44761618 ggggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgtaggattttgatgactttgatgatttta 44761717  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||| ||||| ||||||||    
T  44761718 aaagactattaaggatttcaatagatttaattcataa 44761754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 161 - 291
Target Start/End: Complemental strand, 20498898 - 20498768
Alignment:
Q  161 tattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||     
T  20498898 tattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattatgatgactttgatgattttaaaagaa 20498799  T
Q  261 tactaaagatttcaatggattttattcataa 291  Q
    || ||| ||||||||||||||| ||||||||    
T  20498798 taataaggatttcaatggatttaattcataa 20498768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 161 - 291
Target Start/End: Original strand, 51699054 - 51699184
Alignment:
Q  161 tattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagac 260  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  51699054 tattggattatgattttaaaggacaatttttgtttaaaaaagtcttaaggattttaaaagactttgcaagattttgatgactttgatgattttaaaagac 51699153  T
Q  261 tactaaagatttcaatggattttattcataa 291  Q
    || ||| ||||||||||||||| ||| ||||    
T  51699154 tattaaggatttcaatggatttaattaataa 51699184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 154 - 291
Target Start/End: Original strand, 29448435 - 29448571
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||| ||||||    
T  29448435 aggggtgtattggattaggattttaaaaaacaatttttgtttaaaaaagtcttgagaattttaaaagactttgcaagattttgatgactttga-gatttt 29448533  T
Q  254 aaaagactactaaagatttcaatggattttattcataa 291  Q
    ||||||||| ||| ||||||||||||||| ||||||||    
T  29448534 aaaagactattaaggatttcaatggatttaattcataa 29448571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 6590187 - 6590052
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||  |||||||||||||||||| |||| |    
T  6590187 gggtgtattggattaggattttaaaggacaatttttgtttaagaaagtcttgaggattttaaaagactttagaggattttgatgactttgatggttttta 6590088  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||| ||||| ||||||||    
T  6590087 aagactattaaggatttcaatcgatttaattcataa 6590052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 161 - 291
Target Start/End: Original strand, 6131014 - 6131144
Alignment:
Q  161 tattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagac 260  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  6131014 tattagattaagattttaaaggacaatttttgtttaaaaaagtctttaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagac 6131113  T
Q  261 tactaaagatttcaatggattttattcataa 291  Q
    || ||| ||||| ||||||||| ||||||||    
T  6131114 tattaaggatttaaatggatttaattcataa 6131144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 10138725 - 10138860
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    |||||||| | ||||||||||||||    
T  10138725 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaattcttaaggattttaaaagactttgatggattttgattaatttgatgattttaa 10138824  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    |||| || ||| ||||||||||||||| ||||||||    
T  10138825 aagattattaaggatttcaatggatttaattcataa 10138860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 25419053 - 25418927
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         || || || |||||||||||    
T  25419053 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttg---------gaggatttggatgattttaa 25418963  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||||||||| ||||||||    
T  25418962 aagactattaaggatttcaatggatttaattcataa 25418927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 35338377 - 35338242
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    |||||||| | ||||||||||||||    
T  35338377 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttaatgattttaaaagactttgatggattttgattaatttgatgattttaa 35338278  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    || | || ||| ||||||||||||||| ||| ||||    
T  35338277 aatattattaaggatttcaatggatttaatttataa 35338242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 6976298 - 6976188
Alignment:
Q  152 agaggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatt 251  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| |  ||||| |||||||| ||||||    
T  6976298 agaggggtgtatttgattatgattttaaaggacaatttttgcttaaaaaagtctcaaggattttaaaagactttgtaggattttaatgacttttatgatt 6976199  T
Q  252 ttaaaagacta 262  Q
    |||||||||||    
T  6976198 ttaaaagacta 6976188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 288
Target Start/End: Original strand, 16008098 - 16008222
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||         |||||||||    
T  16008098 ggggcgtattggattaggattttaaaggtcaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttg---------atgatttta 16008188  T
Q  255 aaagactactaaagatttcaatggattttattca 288  Q
    |||||| | ||| ||||||||||||||| |||||    
T  16008189 aaagacaattaaggatttcaatggatttaattca 16008222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 291
Target Start/End: Complemental strand, 40247424 - 40247300
Alignment:
Q  158 gtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaa 257  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||         || || ||||||||||||||||    
T  40247424 gtgtattggatttggattttaaaggataatttttgtttaaaaaagtgttgaggattttaaaagactttg---------gaggattttgatgattttaaaa 40247334  T
Q  258 gactactaaagatttcaatggattttattcataa 291  Q
    ||||| ||| ||||||||||||||| ||||||||    
T  40247333 gactattaaggatttcaatggatttaattcataa 40247300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 155 - 262
Target Start/End: Complemental strand, 7319174 - 7319068
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||| ||||||||| || ||||||| ||||| |||||||||||||||||| || ||||| |||||||| | |||||||    
T  7319174 ggggtgtattggattaggattttaaaagacaatttt-gtataaaaaaatcttgtggattttaaaagactttgaaagattttaatgacttttaagatttta 7319076  T
Q  255 aaagacta 262  Q
    ||||||||    
T  7319075 aaagacta 7319068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 53928648 - 53928733
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatga 240  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| || ||||||||||    
T  53928648 ggggtgtattggattagaattttaaaggataatttttgtttaaaaaagtgttgagaattttaaaagactttgcaagattttgatga 53928733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 15492403 - 15492511
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||| |  | |||||||||||| |||| |  ||||| |||| ||| ||||||||    
T  15492403 aggggtgtattggattagaattttaaaggacaatttttgcttaaaaaagtttcaaagattttaaaagattttgtatgattttaatgattttcatgatttt 15492502  T
Q  254 aaaagacta 262  Q
    |||||||||    
T  15492503 aaaagacta 15492511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 155 - 262
Target Start/End: Original strand, 50899252 - 50899359
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||| ||||||||||| ||||||||||||||| ||||||||||||  | |||||||||||| |||| |  ||||| |||| ||| |||||||||    
T  50899252 ggggtgtattagattaggatttcaaaggacaatttttgcttaaaaaagtctcaaagattttaaaagattttgtaggattttaatgatttttatgatttta 50899351  T
Q  255 aaagacta 262  Q
    ||||||||    
T  50899352 aaagacta 50899359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 1439521 - 1439583
Alignment:
Q  163 ttggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagacttt 225  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  1439521 ttggattaggattttaaaggacaatttttgtttaaaaaaatcttaaggattttaaaagacttt 1439583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 158 - 262
Target Start/End: Complemental strand, 46174824 - 46174720
Alignment:
Q  158 gtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaa 257  Q
    ||||||| ||||||||||||||| || ||||||||||||||||||| ||||| ||||||||||| |||| |  ||||| | |||||| | ||||||||||    
T  46174824 gtgtattcgattaggattttaaaagataatttttgtttaaaaaagttttgagaattttaaaagattttgcatgattttaaggacttttaagattttaaaa 46174725  T
Q  258 gacta 262  Q
    |||||    
T  46174724 gacta 46174720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 155 - 262
Target Start/End: Complemental strand, 45135794 - 45135687
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||| ||||||||||||||| |||||||||   | |||||||||||| | |||||||||||||||| || ||||| |||||||| |  ||||||    
T  45135794 ggggtgtatttgattaggattttaaaagacaattttgtataaaaaaagtcttgtgtattttaaaagactttgaaagattttaatgacttttaaaatttta 45135695  T
Q  255 aaagacta 262  Q
    ||||||||    
T  45135694 aaagacta 45135687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 52080649 - 52080518
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaa----aaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgat 250  Q
    |||||||||||||||| |||||||||||||||||||| |||      ||||||||||| ||||||||||||||||| ||         || |||||||||    
T  52080649 ggggtgtattggattatgattttaaaggacaatttttttttttttttaaaagtcttgaagattttaaaagactttgcaa---------gattttgatgat 52080559  T
Q  251 tttaaaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||||||| ||| ||||||||||||||| ||||||||    
T  52080558 tttaaaagactattaaggatttcaatggatttaattcataa 52080518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 155 - 262
Target Start/End: Original strand, 539340 - 539444
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||| ||||| ||||| |||||||| |||||||||||| || |||||||||||||||||   |  ||| |||||||| |||||||||    
T  539340 ggggtgtattggattagcatttttaagga-aatttttgcttaaaaaagtctcgaagattttaaaagactttgtgga--tttaatgactttcatgatttta 539436  T
Q  255 aaagacta 262  Q
    ||||||||    
T  539437 aaagacta 539444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 5826091 - 5826001
Alignment:
Q  167 attaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaag 258  Q
    ||||||||| ||| |||||||||||||||||||  |||||||| ||||||||||| |||| |||||||| |||| ||| |||||||||||||    
T  5826091 attaggattgtaagggacaatttttgtttaaaag-gtcttgagaattttaaaagattttgtaaaattttaatgattttcatgattttaaaag 5826001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 6034692 - 6034761
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttg 226  Q
    ||||||||| |||||||||||||| |||||| |||| |||||||||||| | ||||||||||||||||||    
T  6034692 ggtgtattgaattaggattttaaaagacaatgtttgcttaaaaaagtctcgtggattttaaaagactttg 6034761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 12108169 - 12108120
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtct 205  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12108169 gggtgtattggattaggattttaaaggacaatttttgcttaaaaaagtct 12108120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 52115181 - 52115130
Alignment:
Q  174 ttttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagacttt 225  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  52115181 ttttaaaggacaatttttgtttaaaaaagtcttaagaattttaaaagacttt 52115130  T

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Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 28145618 - 28145684
Alignment:
Q  167 attaggattttaaaggacaatttttgtttaaaa-aagtcttgaggattttaaaagactttggaaaat 232  Q
    |||||||||||||| |||||||||||| ||||| |||||||| |||||||||||||||||| |||||    
T  28145618 attaggattttaaaagacaatttttgtataaaaaaagtcttgtggattttaaaagactttgaaaaat 28145684  T

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Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 38772586 - 38772534
Alignment:
Q  166 gattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||  || ||||||||    
T  38772586 gattaggattttaaaggacaatttttgtttaaaaaagtctcaagaattttaaa 38772534  T

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Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 52617087 - 52617157
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttg 226  Q
    |||||||||||||||||||||||||| ||||| ||||  | ||||||||||| | |||||||||||||||||    
T  52617087 ggggtgtattggattaggattttaaaagacaa-ttttaataaaaaaagtctttaagattttaaaagactttg 52617157  T

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Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 3205599 - 3205653
Alignment:
Q  237 atgactttgatgattttaaaagactactaaagatttcaatggattttattcataa 291  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  3205599 atgattttgatgattttaaaagactattaaggatttcaatggatttaattcataa 3205653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 37820323 - 37820389
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagac 222  Q
    |||||||||| ||||||||||||||  |||| ||||||||||||| | |||||| ||||||||||||    
T  37820323 gggtgtattgaattaggattttaaataacaaattttgtttaaaaaggccttgagaattttaaaagac 37820389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 39842119 - 39842168
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtct 205  Q
    |||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  39842119 gggtgtattggattaggattttaaaggataatttttgcttaaagaagtct 39842168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 46750064 - 46749965
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||| ||||||||| |||||||||||  | ||||||||  | ||||||||||||| | | ||| ||||| |||||||| | |||||||    
T  46750064 ggggtgtattggattacgattttaaaagacaatttttg-atgaaaaagtccagtggattttaaaagattattgaagattttaatgacttttacgatttta 46749966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 31645364 - 31645431
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||| ||||||||| ||||| ||||  | ||||||||||| | ||||||||||||||    
T  31645364 ggggtgtattggattaagattttaaaagacaa-ttttaataaaaaaagtctttaagattttaaaagact 31645431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 36673260 - 36673327
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  36673260 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 36673327  T

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Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 190
Target Start/End: Complemental strand, 54629947 - 54629912
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttt 190  Q
    |||||||||||||||||||||||||| |||||||||    
T  54629947 ggggtgtattggattaggattttaaaagacaatttt 54629912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 10661278 - 10661216
Alignment:
Q  159 tgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 221  Q
    |||||||||||||||||||||| ||| |||||  |  ||||||||||| | ||||||||||||    
T  10661278 tgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaaga 10661216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 12104148 - 12104046
Alignment:
Q  161 tattggattaggattttaaaggacaatttttgtttaaaaaagt-cttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaaga 259  Q
    ||||||||||  |||||| |||| |||||||| |||||||| | ||  | |||||||||||| |||  |  ||||| |||||||| ||||||||||||||    
T  12104148 tattggattaaaattttagaggaaaatttttgcttaaaaaaattctcaaagattttaaaagattttataggattttaatgactttcatgattttaaaaga 12104049  T
Q  260 cta 262  Q
    |||    
T  12104048 cta 12104046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 221
Target Start/End: Complemental strand, 27594036 - 27593967
Alignment:
Q  152 agaggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 221  Q
    ||||||||||||||||||  ||||||||| ||| |||||     ||||||||||||| ||||||||||||    
T  27594036 agaggggtgtattggattgagattttaaaagactattttgacaaaaaaaagtcttgaagattttaaaaga 27593967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 37820392 - 37820441
Alignment:
Q  242 tttgatgattttaaaagactactaaagatttcaatggattttattcataa 291  Q
    |||||| ||||||||||| || ||| ||||||||||||||| ||||||||    
T  37820392 tttgattattttaaaagattattaaggatttcaatggatttaattcataa 37820441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 51736870 - 51736935
Alignment:
Q  158 gtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||  || |||||  |  ||||||||||| | ||||||||||||||    
T  51736870 gtgtattggattaggattttaaaatactattttaataaaaaaaagtctttaagattttaaaagact 51736935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 53928726 - 53928775
Alignment:
Q  242 tttgatgattttaaaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||||||||||||| || ||| ||||||||||||||| ||| ||||    
T  53928726 tttgatgattttaaaagattattaaggatttcaatggatttaattaataa 53928775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 11432641 - 11432574
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| |  |||||||||||||    
T  11432641 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaaaattttaaaagact 11432574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 20833990 - 20833927
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 221  Q
    |||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||    
T  20833990 ggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaaga 20833927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 44277717 - 44277677
Alignment:
Q  161 tattggattaggattttaaaggacaatttttgtttaaaaaa 201  Q
    |||||||||||||||||||| || |||||||| ||||||||    
T  44277717 tattggattaggattttaaaagataatttttgcttaaaaaa 44277677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 259
Target Start/End: Original strand, 45925783 - 45925890
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtt--taaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatt 251  Q
    |||||||| ||| |||||||||||||| |||||||||   |   |||||||||||| ||||||||||| | | || || ||||| || ||||| | ||||    
T  45925783 aggggtgtgttgaattaggattttaaaagacaattttacataaaaaaaaagtcttgtggattttaaaatattgtgcaagattttaataacttttaagatt 45925882  T
Q  252 ttaaaaga 259  Q
    ||||||||    
T  45925883 ttaaaaga 45925890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 2e-59; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 6303775 - 6303911
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  6303775 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgatttta 6303874  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  6303875 aaagactaataaggatttcaatggatttaattcataa 6303911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 49197761 - 49197897
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  49197761 ggggtgtattggattaggattttaaaagacaatttttgtttaaaaaagttttgaggattttaaaagactttgcaaaattttgatgactttgatgatttta 49197860  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||| ||||| ||||||||    
T  49197861 aaagactattaaggatttcaatagatttaattcataa 49197897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 155 - 288
Target Start/End: Original strand, 19451281 - 19451414
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  19451281 ggggtgtattggattatgattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgatttta 19451380  T
Q  255 aaagactactaaagatttcaatggattttattca 288  Q
    |||||||| ||| ||||||||||||||| |||||    
T  19451381 aaagactattaaggatttcaatggatttaattca 19451414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 956165 - 956030
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  956165 gggtgtattggattagaattttaaaagacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 956066  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||||||||| ||||||||    
T  956065 aagactattaaggatttcaatggatttaattcataa 956030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 35280364 - 35280235
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| |||| ||||    
T  35280364 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgattacttttatgaattta 35280265  T
Q  255 aaagactactaaagatttcaatggatttta 284  Q
    |||||||| ||| |||||||||||||||||    
T  35280264 aaagactattaaggatttcaatggatttta 35280235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 28823882 - 28824018
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  28823882 ggggtgtattggattaatatttcaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgtaagattttgatgactttgatgatttta 28823981  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||| ||||    
T  28823982 aaagactattaaggatttcaatggatttaatttataa 28824018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 45759458 - 45759594
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  45759458 ggggtgtattggattaggattttaaaggacaatttttgtttgaaaaagttttgaggattttaaaagactttgcaacattttgatgactttgatgatttta 45759557  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| || ||||||| |||| ||||||||    
T  45759558 aaagactattaaggaattcaatgaatttaattcataa 45759594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 730781 - 730645
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||| || ||||||||||||||||| ||||||    
T  730781 ggggtgtattgaattaggattttaaaggataatttttgtttaaaaaaatcttgatgattttaaaagactttgcaagattttgatgactttgataatttta 730682  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  730681 aaagactattaaggatttcaatggatttaattcataa 730645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 47781353 - 47781216
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaattttt-gtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||    
T  47781353 ggggtgtattggattaggattttaaaagataattttttgtttaaaaaagtcttgaggattttaaaagactttgcagggttttgatgactttgatgatttt 47781254  T
Q  254 aaaagactactaaagatttcaatggattttattcataa 291  Q
    ||||||||| ||| ||||||||||||||| ||||||||    
T  47781253 aaaagactattaaggatttcaatggatttaattcataa 47781216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 161 - 291
Target Start/End: Original strand, 47653843 - 47653974
Alignment:
Q  161 tattggattaggattttaaaggacaatttttgtttaaaaaa-gtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaaga 259  Q
    ||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  47653843 tattggattaggattttaaagaacaatttttgtttaaaaaaagttttgaggattttaaaagactttgcaagattttgatgactttgatgattttaaaaga 47653942  T
Q  260 ctactaaagatttcaatggattttattcataa 291  Q
    ||| |||  |||||||||||||| ||||||||    
T  47653943 ctattaagaatttcaatggatttaattcataa 47653974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 31571845 - 31571971
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||  |||||||| ||||||||||||||||    
T  31571845 gggtgtattagattagaattttaaaggacaatttttgtttaaaaaagttttgagaattttaaaagactttggaggattttgataactttgatgattttaa 31571944  T
Q  256 aagactactaaagatttcaatggattt 282  Q
    ||||||  |||||||||||||||||||    
T  31571945 aagactgttaaagatttcaatggattt 31571971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 35678761 - 35678895
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||| |||||||||| |  ||||||||||||||||||||||||    
T  35678761 ggggtgtattggattaggattttaacggataatttttgtttaaaa--gtcttgaggattttgaaagactttgtaggattttgatgactttgatgatttta 35678858  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  35678859 aaagactattaaggatttcaatggatttaattcataa 35678895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 50192072 - 50192207
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    |||||||| | ||||||||||||||    
T  50192072 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttaaggattttaaaagactttgatggattttgattaatttgatgattttaa 50192171  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    || | || ||| ||||||||||||||| ||||||||    
T  50192172 aatattattaaggatttcaatggatttaattcataa 50192207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 29209544 - 29209444
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |  ||||| |||| ||| ||||||||    
T  29209544 aggggtgtattagattaggattttaaaggacaatttttgtttaaaaaa-tcttaaggattttaaaagactttgcatgattttaatgattttcatgatttt 29209446  T
Q  254 aa 255  Q
    ||    
T  29209445 aa 29209444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 49418664 - 49418538
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||| ||| |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||          | || ||||||||||||||    
T  49418664 gggtgcattagattagaattttaaaggataatttttgtttaaaaaaatcttgaggattttaaaagactttg---------aaggattttgatgattttaa 49418574  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||||||||| ||||||||    
T  49418573 aagactattaaggatttcaatggatttaattcataa 49418538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 37014327 - 37014391
Alignment:
Q  162 attggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttg 226  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  37014327 attggattaggattttgaaggacaatttttgtttaaaaaagtcttaaggattttaaaagactttg 37014391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 48525178 - 48525094
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatga 240  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||| |||| |  ||||||||||    
T  48525178 gggtgtattggattaggattttaaaggataatttttgtttaaaaatgacttgaggattttaaaagattttgcaggattttgatga 48525094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 156 - 262
Target Start/End: Original strand, 31622268 - 31622374
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttga-ggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||| ||||||||||||||| | ||| ||| |||||||||||| ||| |||||||||||||||||| |  |||||||| |||||||||||||||    
T  31622268 gggtgtattg-attaggattttaaagaaaaatctttatttaaaaaagtcctgaaggattttaaaagactttgtaggattttgattactttgatgatttta 31622366  T
Q  255 aaagacta 262  Q
    ||||||||    
T  31622367 aaagacta 31622374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 47784877 - 47784806
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttg 226  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  47784877 ggggtgtattggaccaggattttaaaggacaatttttgtttaaaaaagtcttatggattttaaaagactttg 47784806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 155 - 259
Target Start/End: Original strand, 1923096 - 1923200
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||| ||| |||||||| | ||||||||| | ||||||||||||| | || || ||||| |||||||| | |||||||    
T  1923096 ggggtgtattggattaggattttaaaagactatttttgtatgaaaaagtctagtggattttaaaagattatgcaagattttaatgacttttaggatttta 1923195  T
Q  255 aaaga 259  Q
    |||||    
T  1923196 aaaga 1923200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 32588244 - 32588313
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttg 226  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||||||| |||||||||||||||||||    
T  32588244 gggtgtattggattaggatcttaaaagataatttttgtttaaaaaagtctt-aggattttaaaagactttg 32588313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 29556639 - 29556579
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaa 217  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  29556639 ggtgtattgaattaggattttaaagaacaatttttgtttaaaaaagtcttgagaattttaa 29556579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 291
Target Start/End: Complemental strand, 45536651 - 45536560
Alignment:
Q  200 aagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagactactaaagatttcaatggattttattcataa 291  Q
    ||||||||| ||||||||||||   || || ||||| ||||||||||||||||||||| |||| ||| ||||||||||||||| ||||||||    
T  45536651 aagtcttgatgattttaaaagatcatgtaagatttttatgactttgatgattttaaaatactattaaggatttcaatggatttaattcataa 45536560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 42658677 - 42658579
Alignment:
Q  161 tattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaaga 259  Q
    |||||||||||||||||||| |||||||||||  | ||||||||| | ||||||||||||||| || || ||||  |||||||| | ||||||||||||    
T  42658677 tattggattaggattttaaaagacaatttttgcatgaaaaagtctagtggattttaaaagactatgcaagatttcaatgacttttaagattttaaaaga 42658579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 21222797 - 21222722
Alignment:
Q  216 aaaagactttggaaaattttgatgactttgatgattttaaaagactactaaagatttcaatggattttattcataa 291  Q
    |||| |||||| || |||||||||| ||||||||||||||||||||| ||| ||||||||||||||| ||| ||||    
T  21222797 aaaatactttgcaagattttgatgattttgatgattttaaaagactattaaggatttcaatggatttaattaataa 21222722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 46601414 - 46601473
Alignment:
Q  167 attaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttg 226  Q
    |||||||||||||| |||||||||| |||||||||||||||| |||||| ||||||||||    
T  46601414 attaggattttaaaagacaatttttatttaaaaaagtcttgaagattttgaaagactttg 46601473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 33026212 - 33026172
Alignment:
Q  159 tgtattggattaggattttaaaggacaatttttgtttaaaa 199  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33026212 tgtattggattaggattttaaaggacaatttttgtttaaaa 33026172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 49232081 - 49232011
Alignment:
Q  152 agaggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    ||||||||||||||||||||||||||||| ||||| ||||  | ||||||||||| | ||||||||||||||    
T  49232081 agaggggtgtattggattaggattttaaaagacaa-ttttaataaaaaaagtctttaagattttaaaagact 49232011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 262
Target Start/End: Complemental strand, 26284410 - 26284305
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaa 256  Q
    ||||||||| |||||| ||||||| |||| ||||| |  |||||| ||||| | |||||| ||||||||| || ||||| || ||||| | |||||||||    
T  26284410 ggtgtattgaattaggtttttaaaagacattttttttaaaaaaaaatcttgtgcattttataagactttgcaagattttaattacttttaagattttaaa 26284311  T
Q  257 agacta 262  Q
    ||||||    
T  26284310 agacta 26284305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 28386558 - 28386626
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| |||||  |  ||||||||||| | ||||||||||||||    
T  28386558 ggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagact 28386626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 6313670 - 6313603
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  6313670 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 6313603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 25613186 - 25613119
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  25613186 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 25613119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 29395538 - 29395605
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  29395538 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 29395605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 33085441 - 33085491
Alignment:
Q  241 ctttgatgattttaaaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||||||||||||||||| ||| ||||||||| | ||| ||||||||    
T  33085441 ctttgatgattttaaaagactattaaggatttcaatagttttaattcataa 33085491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 259
Target Start/End: Complemental strand, 19350343 - 19350238
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    ||||||||||| ||||||||||||||| || | ||||||  | || || |||||  | |||||||||||| |  |||||||| |||| ||| | ||||||    
T  19350343 aggggtgtattagattaggattttaaaagaaattttttgcatgaataaatcttgtaggttttaaaagactattcaaaattttaatgatttttaagatttt 19350244  T
Q  254 aaaaga 259  Q
    ||||||    
T  19350243 aaaaga 19350238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 262
Target Start/End: Complemental strand, 27199131 - 27199066
Alignment:
Q  197 aaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagacta 262  Q
    ||||||||| | ||||||| ||||||| || || ||||| |||||||| | |||||||||||||||    
T  27199131 aaaaagtctagtggattttgaaagactatgcaagattttaatgacttttaagattttaaaagacta 27199066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 9321619 - 9321687
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    ||||||||||| ||| |||||||||| ||| |||||  |  ||||||||||| | ||||||||||||||    
T  9321619 ggggtgtattgaattgggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagact 9321687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 17994423 - 17994473
Alignment:
Q  183 acaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaatttt 235  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||||||| |||||    
T  17994423 acaatttttgtttaaaaaagt-ttgtggattttaaaaga-tttggaagatttt 17994473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 48176645 - 48176681
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttt 190  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  48176645 aggggtgtattggattaggattttaaaagactatttt 48176681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 51702688 - 51702621
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    ||||||||| |||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  51702688 ggggtgtataggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 51702621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 4e-57; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 12894054 - 12893918
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  12894054 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgatttta 12893955  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| |||  |||||||||||||| ||||||||    
T  12893954 aaagactattaagaatttcaatggatttaattcataa 12893918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 44343001 - 44343137
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  44343001 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttcatgactttgatgatttta 44343100  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  44343101 aaagactattaaggatttcaatggatttaattcataa 44343137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 157 - 291
Target Start/End: Original strand, 7718802 - 7718936
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaa 256  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  7718802 ggtgtattggattaggattttaaagaacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaaa 7718901  T
Q  257 agactactaaagatttcaatggattttattcataa 291  Q
    |||||| ||| ||||||||||||||| ||||||||    
T  7718902 agactattaatgatttcaatggatttaattcataa 7718936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 18916444 - 18916580
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||    
T  18916444 ggggtgtattggattatgattttaaaggacaatttttgtttaaaaaagtcttgaagattttaaaagactttgcaagattttgatgactttgatgatttta 18916543  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  18916544 aaagactattaaggatttcaatggatttaattcataa 18916580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 40996129 - 40996265
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  40996129 ggggtgtattgtattaggattttaaaggataatttttgattaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgatttta 40996228  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  40996229 aaagactattaaagatttcaatggatttaattcataa 40996265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 43392026 - 43392161
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  43392026 gggtgtattggattaggattttaaaggataatttttgtttaaaaaagtattgaggattttaaaagactttgcagaattttgatgactttgatgattttaa 43392125  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||||||||| ||||||||    
T  43392126 aagactattaaggatttcaatggatttaattcataa 43392161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 157 - 291
Target Start/End: Original strand, 7717871 - 7718005
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaa 256  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  7717871 ggtgtattagattaggattttaaagaacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaaa 7717970  T
Q  257 agactactaaagatttcaatggattttattcataa 291  Q
    |||||| ||| ||||||||||||||| ||||||||    
T  7717971 agactattaaggatttcaatggatttaattcataa 7718005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 154 - 291
Target Start/End: Original strand, 39218881 - 39219018
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||    
T  39218881 aggggtgtattgaattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgattactttgatgatttt 39218980  T
Q  254 aaaagactactaaagatttcaatggattttattcataa 291  Q
    ||||||||| ||| ||||||||||||||| ||| ||||    
T  39218981 aaaagactattaaggatttcaatggatttaattaataa 39219018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 47879798 - 47879662
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  47879798 ggggtgtattggattaggattttaaaagataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatgactttgatgatttta 47879699  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  47879698 aaagactattaaggatttcaatggatttaattcataa 47879662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 47914876 - 47914740
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  47914876 ggggtgtattggattaggattttaaaagataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatgactttgatgatttta 47914777  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  47914776 aaagactattaaggatttcaatggatttaattcataa 47914740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 8078756 - 8078620
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  8078756 ggggtgtattgaaataggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttacaagattttgatgactttgatgatttta 8078657  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| |||||||||| |||| ||| ||||    
T  8078656 aaagactattaaggatttcaatgaatttaattaataa 8078620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 728082 - 727947
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  728082 gggtgtattgaattaggattttaaaggagaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaatattttgatgactttgatgattttaa 727983  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    || |||| |||  |||||||| ||||| ||||||||    
T  727982 aaaactattaagaatttcaatagatttaattcataa 727947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 977467 - 977332
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||    
T  977467 gggtgtattggtttaggattttaaaagacaatttttgtttaaaaaagtcttgaagattttaaaagactttgcaagattttgatgactttgatgattttaa 977368  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    |||| |  ||| ||||||||||||||| ||||||||    
T  977367 aagatttttaatgatttcaatggatttaattcataa 977332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 156 - 290
Target Start/End: Complemental strand, 31402029 - 31401895
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||| || |||||||||||||    
T  31402029 gggtgtattgaattagaattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgataaccttgatgattttaa 31401930  T
Q  256 aagactactaaagatttcaatggattttattcata 290  Q
    ||||||| ||| ||||||||||||||| |||||||    
T  31401929 aagactattaaggatttcaatggatttaattcata 31401895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 43580616 - 43580751
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||| || |||||||| |||||||||||||||    
T  43580616 ggggtgtat-ggattaggattttaaaggacaatttttgtttaaaaaaattttgacgattttaaaagactttgcaagattttgataactttgatgatttta 43580714  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  43580715 aaagactattaaggatttcaatggatttaattcataa 43580751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 34695964 - 34695829
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    |||||||| | ||||||||||||||    
T  34695964 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttaaggattttaaaagactttgatggattttgattaatttgatgattttaa 34695865  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    || | || ||| ||||||||||||||| ||||||||    
T  34695864 aatattattaaggatttcaatggatttaattcataa 34695829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 30441809 - 30441669
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgat----gat 250  Q
    ||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||    |||    
T  30441809 ggggtttattggattaagattttaaagtacaatttttgtttaaaaaagtcttgaggattttaaaatactttgcaagattttgatgactttgatgattgat 30441710  T
Q  251 tttaaaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||||||| ||| |||||||| |||||| ||||||||    
T  30441709 tttaaaagactattaaggatttcaagggatttaattcataa 30441669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 161 - 291
Target Start/End: Complemental strand, 34009645 - 34009524
Alignment:
Q  161 tattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         || |||||||||||||||||||    
T  34009645 tattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaa---------gattttgatgattttaaaagac 34009555  T
Q  261 tactaaagatttcaatggattttattcataa 291  Q
    || ||| ||||||||||||||| ||||||||    
T  34009554 tattaaggatttcaatggatttaattcataa 34009524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 7114025 - 7113899
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||         || || ||||||||||||||    
T  7114025 gggtgtattggtttatgattttaaaggacaatttttgtttaaaaaagtcttaagaattttaaaagactttg---------gaggattttgatgattttaa 7113935  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||||||||||||||||||| ||||||||    
T  7113934 aagactattaaagatttcaatggatttaattcataa 7113899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 288
Target Start/End: Original strand, 20274900 - 20275022
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||         || || ||||||||||||||    
T  20274900 gggtgtattgaattaggattttaaagtacaatttttgttt-aaaaagtcttgaggattttaaaagactttg---------gaggattttgatgattttaa 20274989  T
Q  256 aagactactaaagatttcaatggattttattca 288  Q
    ||||||| ||| ||||||||||||||| |||||    
T  20274990 aagactattaaggatttcaatggatttaattca 20275022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 12964097 - 12964031
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 221  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  12964097 ggggtgtattggattaggattttaaaggacaatttttgcttaaaaaagtcttgaagattttaaaaga 12964031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 156 - 262
Target Start/End: Complemental strand, 19811199 - 19811093
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||| ||||||||||| ||||| |||||||| |||||||||||| ||||||||||||||| |||| |  ||||| |||||||| ||||||| ||    
T  19811199 gggtgtattgaattaggattttgaaggataatttttgcttaaaaaagtctcgaggattttaaaagattttgtaggattttaatgacttttatgatttcaa 19811100  T
Q  256 aagacta 262  Q
    |||||||    
T  19811099 aagacta 19811093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 155 - 262
Target Start/End: Original strand, 3796702 - 3796809
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||||||||  | |||||||||||| |||| |  ||||  |||||||| |||||||||    
T  3796702 ggggtgtattgaattaggattttaaaggacaatttttgagtaaaaaagtctcaaagattttaaaagattttgtaggatttaaatgacttttatgatttta 3796801  T
Q  255 aaagacta 262  Q
    ||||||||    
T  3796802 aaagacta 3796809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 835129 - 835047
Alignment:
Q  158 gtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatga 240  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||| | | || | |||||||||||    
T  835129 gtgtattggattaggattttaaaagataatttttgtttaaaaaagtcttgatgattttaaaaaattatgcagaattttgatga 835047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 1200309 - 1200227
Alignment:
Q  158 gtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatga 240  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||| | | || | |||||||||||    
T  1200309 gtgtattggattaggattttaaaagataatttttgtttaaaaaagtcttgatgattttaaaaaattatgcagaattttgatga 1200227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 9180414 - 9180353
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaa 217  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  9180414 gggtgaattggattaggattttaaaggacaatttttgtttaaaaaagtgttaaggattttaa 9180353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 448313 - 448245
Alignment:
Q  158 gtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttg 226  Q
    |||| ||| |||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  448313 gtgtgttgaattatgattttaaagaataatttttgtttaaaaaagtcttgaggattttaaaagactttg 448245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 259
Target Start/End: Complemental strand, 3635223 - 3635118
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    ||||||||||||||||||||||||||| |||||||||| | | ||||||||| | |||||| |||||| | || || ||| | |||||||| | ||||||    
T  3635223 aggggtgtattggattaggattttaaaagacaatttttatatgaaaaagtctagtggatttaaaaagattatgcaagattgtaatgacttttaggatttt 3635124  T
Q  254 aaaaga 259  Q
    ||||||    
T  3635123 aaaaga 3635118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 262
Target Start/End: Original strand, 43186961 - 43187054
Alignment:
Q  169 taggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagacta 262  Q
    |||||||||| ||||||||||||| ||||||||||||  | |||||| ||||| ||| ||  ||||| |||||||| |||||||||||||||||    
T  43186961 taggattttagaggacaatttttgattaaaaaagtctcaaagatttttaaagattttagaggattttaatgactttcatgattttaaaagacta 43187054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 10069016 - 10068948
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||| || ||||||||||||||| |||||||| ||||||||||||  ||||||||||||||||    
T  10069016 ggggtgtattagactaggattttaaaggataatttttgcttaaaaaagtctcaaggattttaaaagact 10068948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 10617466 - 10617374
Alignment:
Q  163 ttggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||  |||||||||||||||||||  |||||||| |||||| ||||||||||||||| | |  ||||| |||||||| ||||||||||    
T  10617466 ttggattaaaattttaaaggacaatttttacttaaaaaaatcttgaagattttaaaagacttcgtaggattttaatgactttcatgattttaa 10617374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 43679839 - 43679777
Alignment:
Q  162 attggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactt 224  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||| || ||||||||||||||    
T  43679839 attggattaggattttaatggataatttttgtttaaaaaaatctttagtattttaaaagactt 43679777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 19252121 - 19252018
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaa 256  Q
    ||||| || |||||||||| |||||||||||||||| |||||||  |||    |||||||||||| |||| || ||||| |||||||| |||||||||||    
T  19252121 ggtgttttagattaggattctaaaggacaatttttgcttaaaaat-tctaagtgattttaaaagattttgtaagattttaatgactttcatgattttaaa 19252023  T
Q  257 agact 261  Q
    |||||    
T  19252022 agact 19252018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 31639266 - 31639220
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaag 202  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||    
T  31639266 gggtgtattggattataattttaaaggacaatttttgtttaaaaaag 31639220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 46121680 - 46121744
Alignment:
Q  158 gtgtattggattaggattttaaaggacaatttttgtt-taaaaaagtcttgaggattttaaaaga 221  Q
    ||||||||||||||||||||||| || ||||||||||  |||||||| ||| |||||||||||||    
T  46121680 gtgtattggattaggattttaaaagataatttttgttgaaaaaaagtattgtggattttaaaaga 46121744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 31639211 - 31639156
Alignment:
Q  236 gatgactttgatgattttaaaagactactaaagatttcaatggattttattcataa 291  Q
    ||||||||| ||||||||||||||||| ||| |||||||||| |||| ||||||||    
T  31639211 gatgactttaatgattttaaaagactattaaggatttcaatgaatttaattcataa 31639156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 29613906 - 29613972
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||| ||| |||||  |  ||||||||||| | ||||||||||||||    
T  29613906 ggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagact 29613972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 29894051 - 29893985
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 221  Q
    |||||||||||||||||||||||||| ||| |||||  |  ||||||||||| | ||||||||||||    
T  29894051 ggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaaga 29893985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 9881401 - 9881467
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| |||||||||    ||||||| |||| | ||||||||||||||    
T  9881401 ggggtgtattggattaggattttaaaagacaatttt--aataaaaaattctttaagattttaaaagact 9881467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 23102385 - 23102318
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  23102385 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 23102318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 259
Target Start/End: Complemental strand, 40098571 - 40098468
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||| ||||||||||||||| ||  |||||||| | ||||||||  | | ||||||||||| | || || ||||| |||||||| | |||||||    
T  40098571 ggggtgtatttgattaggattttaaaagattatttttgtatgaaaaagtc-agtgaattttaaaagattatgcaagattttaatgacttttaggatttta 40098473  T
Q  255 aaaga 259  Q
    |||||    
T  40098472 aaaga 40098468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 40459833 - 40459901
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    ||||||||||||||||| |||||||| ||| |||||  |  ||||||||||| | ||||||||||||||    
T  40459833 ggggtgtattggattagaattttaaaagactattttaataaaaaaaagtctttaagattttaaaagact 40459901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 12741467 - 12741400
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    ||||||||||||||| ||||||||| ||| |||||  |  ||||||||||| | ||||||||||||||    
T  12741467 gggtgtattggattaagattttaaaagactattttaataaaaaaaagtctttaagattttaaaagact 12741400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 44622925 - 44622968
Alignment:
Q  183 acaatttttgtttaaaaaagtcttgaggattttaaaagactttg 226  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||    
T  44622925 acaatttctgttcaaaaaagtcttaaggattttaaaagactttg 44622968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 3024018 - 3023952
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| |||||    ||||||||| || | ||||||||||||||    
T  3024018 ggggtgtattggattaggattttaaaagactatttt--aataaaaaagtttttaagattttaaaagact 3023952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 260
Target Start/End: Original strand, 10676302 - 10676351
Alignment:
Q  211 attttaaaagactttggaaaattttgatgactttgatgattttaaaagac 260  Q
    ||||||||||| |||| || ||||| |||||||| |||||||||||||||    
T  10676302 attttaaaagattttgtaagattttaatgactttcatgattttaaaagac 10676351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 39785192 - 39785123
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgt-ttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| |||||  |   ||||||||||| | ||||||||||||||    
T  39785192 ggggtgtattggattaggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagact 39785123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 28343404 - 28343337
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    ||||||||||||||| |||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  28343404 ggggtgtattggattgggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 28343337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 28762944 - 28762894
Alignment:
Q  183 acaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaatttt 235  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||||||| |||||    
T  28762944 acaatttttgtttaaaaaagt-ttgtggattttaaaaga-tttggaagatttt 28762894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 30823681 - 30823614
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    ||||||||||| |||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  30823681 ggggtgtattgaattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 30823614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 37971509 - 37971572
Alignment:
Q  158 gtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagac 222  Q
    ||||||||||||||||||||||| ||| | ||||  | ||||||||||| | |||||||||||||    
T  37971509 gtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagac 37971572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 4e-57; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 6196940 - 6197076
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  6196940 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttccaagattttgatgactttgatgatttta 6197039  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  6197040 aaagactattaaggatttcaatggatttaattcataa 6197076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 2300149 - 2300285
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  2300149 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaaatcttgaggattttaaaagactttgcaagattttgatgactttgatgatttta 2300248  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    ||| |||| ||| ||||||||||||||| ||||||||    
T  2300249 aaatactattaaggatttcaatggatttaattcataa 2300285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 29077324 - 29077218
Alignment:
Q  185 aatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagactactaaagatttcaatggatttta 284  Q
    ||||||||||||||||||| |||||||||||||||| ||||| || ||||||||||||||||||||||||||||| || ||| ||||||||||||||| |    
T  29077324 aatttttgtttaaaaaagtgttgaggattttaaaaggctttgcaagattttgatgactttgatgattttaaaagattattaaggatttcaatggatttaa 29077225  T
Q  285 ttcataa 291  Q
    |||||||    
T  29077224 ttcataa 29077218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 29112296 - 29112190
Alignment:
Q  185 aatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagactactaaagatttcaatggatttta 284  Q
    ||||||||||||||||||| |||||||||||||||| ||||| || ||||||||||||||||||||||||||||| || ||| ||||||||||||||| |    
T  29112296 aatttttgtttaaaaaagtgttgaggattttaaaaggctttgcaagattttgatgactttgatgattttaaaagattattaaggatttcaatggatttaa 29112197  T
Q  285 ttcataa 291  Q
    |||||||    
T  29112196 ttcataa 29112190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 1392274 - 1392148
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||  ||         ||||||||||||||    
T  1392274 gggtgtattggattaggattttaaatgacgatttttgtttaaaaaagtcttgaggattttaaaagactttggagtat---------tttgatgattttaa 1392184  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||| ||||| ||||||||    
T  1392183 aagactattaaggatttcaatagatttaattcataa 1392148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 158 - 260
Target Start/End: Complemental strand, 7052469 - 7052367
Alignment:
Q  158 gtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaa 257  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |  ||||| ||||||||||||||||| |||    
T  7052469 gtgtattgaattaggattttaaaggacaatttttgtttaaaaaagtcttaagaattttaaaagactttgcatgattttaatgactttgatgattttgaaa 7052370  T
Q  258 gac 260  Q
    |||    
T  7052369 gac 7052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 23929410 - 23929302
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||| || | |||||||||||||||| || ||||| || ||||| | ||||||    
T  23929410 aggggtgtattggattaggattttaaaagacaatttttgtataaaaaagtcctgtgaattttaaaagactttgaaagattttaataacttttaagatttt 23929311  T
Q  254 aaaagacta 262  Q
    |||||||||    
T  23929310 aaaagacta 23929302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 3608121 - 3608041
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttg 236  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| | |||||||    
T  3608121 gggtgtattgaattaggattttaaaggataatttttgtttaaaaaagtctttaggattttaaaagactttgcagaattttg 3608041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 10344926 - 10344984
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggatt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10344926 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggatt 10344984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 2239055 - 2238986
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttg 226  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||| || ||||||||||||||||    
T  2239055 ggtgtattggattacgattttaaaggacaacttttgtttaaaaaagtcttcagaattttaaaagactttg 2238986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 155 - 259
Target Start/End: Complemental strand, 30878884 - 30878780
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||| |||||| |||||||| ||| |||||||| | ||||||||| | |||| |||||||| | || || ||||| |||||||| | |||||||    
T  30878884 ggggtgtatttgattagaattttaaaagactatttttgtatgaaaaagtctagtggatattaaaagattatgcaagattttaatgacttttaggatttta 30878785  T
Q  255 aaaga 259  Q
    |||||    
T  30878784 aaaga 30878780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 5160950 - 5160995
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaa 201  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||    
T  5160950 gggtgtattggattatgattttaaaggacaatttttatttaaaaaa 5160995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 2238992 - 2238940
Alignment:
Q  239 gactttgatgattttaaaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||||||||||||||||||| ||| |||||||||| |||| ||||||||    
T  2238992 gactttgatgattttaaaagactattaaggatttcaatgaatttaattcataa 2238940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 259
Target Start/End: Original strand, 8634703 - 8634789
Alignment:
Q  173 attttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaaga 259  Q
    |||||||| || | ||||| | ||||||||||||| | |||||||||||||||| || ||||  |||||||| | ||||||||||||    
T  8634703 attttaaaagaaattttttctataaaaaagtcttgtgaattttaaaagactttgaaagatttgaatgacttttaagattttaaaaga 8634789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 29114903 - 29114867
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttg 192  Q
    |||||||||||||||||||||||||||| ||||||||    
T  29114903 gggtgtattggattaggattttaaaggataatttttg 29114867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 31068514 - 31068447
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  31068514 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 31068447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 14261552 - 14261618
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    ||||||||||||||| ||||||||| ||||| ||||  | ||||||||||| | ||||||||||||||    
T  14261552 gggtgtattggattatgattttaaaagacaa-ttttaataaaaaaagtctttaagattttaaaagact 14261618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 25839889 - 25839837
Alignment:
Q  230 aattttgatgactttgatgattttaaaagactactaaagatttcaatggattt 282  Q
    ||||| |||||||||||||||||||| |||||| ||| |  ||||||||||||    
T  25839889 aatttggatgactttgatgattttaacagactattaacggattcaatggattt 25839837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 30384172 - 30384239
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||| ||| | ||||||||||||||    
T  30384172 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagcctttaagattttaaaagact 30384239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 31896731 - 31896668
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaa 219  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||    
T  31896731 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaa 31896668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 4e-57; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 22202741 - 22202605
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  22202741 ggggtgtattggattaggattttaaaggacaatttttgtttaaagaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgatttta 22202642  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  22202641 aaagactattaaggatttcaatggatttaattcataa 22202605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 159 - 291
Target Start/End: Complemental strand, 25331757 - 25331625
Alignment:
Q  159 tgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaag 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  25331757 tgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaaaag 25331658  T
Q  259 actactaaagatttcaatggattttattcataa 291  Q
    |||| ||| ||||||||||||||| ||||||||    
T  25331657 actattaaggatttcaatggatttaattcataa 25331625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 55975233 - 55975098
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  55975233 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttagatgattttgatgactttgatgattttaa 55975134  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||||||||||||||||||| ||| ||||    
T  55975133 aagactattaaagatttcaatggatttaattgataa 55975098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 157 - 291
Target Start/End: Original strand, 41880594 - 41880728
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaa 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  41880594 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcatgaggattttaaaagactttgcaagattttgatgactttgatgattttaaa 41880693  T
Q  257 agactactaaagatttcaatggattttattcataa 291  Q
    |||||| ||| ||||||||||||||| ||||||||    
T  41880694 agactattaaggatttcaatggatttaattcataa 41880728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 7007964 - 7007829
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  7007964 gggtgtattggattaggattttaaaagataatttttgtttaaaaaagtcttgaggattttaaaagactttgcagaattttgatgactttgatgattttaa 7007865  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||| ||||| ||||||||    
T  7007864 aagactattaaggatttcaatagatttaattcataa 7007829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 34228160 - 34228296
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  34228160 ggggtgtattggattatgattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatgactttgatgatttta 34228259  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| |||||||||| |||| ||||||||    
T  34228260 aaagactattaaggatttcaatgaatttaattcataa 34228296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 158 - 291
Target Start/End: Original strand, 30009296 - 30009429
Alignment:
Q  158 gtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaa 257  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  30009296 gtgtattggattaggattttaaaggacaatttttatttaaaaaagttttgagaattttaaaagactttggaggattttgatgactttgatgattttaaaa 30009395  T
Q  258 gactactaaagatttcaatggattttattcataa 291  Q
    ||||  ||| ||||||||||||||| ||||||||    
T  30009396 gactgttaaggatttcaatggatttaattcataa 30009429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 163 - 291
Target Start/End: Complemental strand, 47599417 - 47599289
Alignment:
Q  163 ttggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagacta 262  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  47599417 ttggattaggattttaaaggacaatttttgcttaaaaaagtcttaaggattttaaaagacttcggaggattttgatgactttgatgattttaaaagacta 47599318  T
Q  263 ctaaagatttcaatggattttattcataa 291  Q
     ||| ||||||||||||||| ||||||||    
T  47599317 ttaaggatttcaatggatttaattcataa 47599289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 152 - 255
Target Start/End: Complemental strand, 25446752 - 25446649
Alignment:
Q  152 agaggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatt 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  25446752 agaggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgatt 25446653  T
Q  252 ttaa 255  Q
    ||||    
T  25446652 ttaa 25446649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 40536566 - 40536701
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |  |||||||||||||||||||||||||    
T  40536566 gggtgtattggattatgattttaaaggataatttttgtttaaaaaagtcttggggattttaaaagactttgcaggattttgatgactttgatgattttaa 40536665  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    |||||||   ||||||||||||||||| ||||||||    
T  40536666 aagactatataagatttcaatggatttaattcataa 40536701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 42787289 - 42787154
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||| | |||||| |||||||||||||||||||    
T  42787289 gggtgtattggattagaattttaaaggacaatttttgtttaaaaaagtcttgaagattttaaaagattttgcagaatttttatgactttgatgattttaa 42787190  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||||||||| ||| ||||    
T  42787189 aagactattaaggatttcaatggatttaatttataa 42787154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 157 - 291
Target Start/End: Complemental strand, 3437204 - 3437070
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaa 256  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||    
T  3437204 ggtgtattgaattaggattttaaaagacaatttttgtttaaaaaagtcttgaggattttaaaagactttgctggattttgatgactttgatgattttaaa 3437105  T
Q  257 agactactaaagatttcaatggattttattcataa 291  Q
     ||||| ||| ||||||||||||||| ||||||||    
T  3437104 tgactattaaggatttcaatggatttaattcataa 3437070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 32952313 - 32952177
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |  ||||||||||||||||| ||||||    
T  32952313 ggggtgtattggataagaattttaaaggataatttttgtttaaataagtcttgaggattttaaaagactttgtaggattttgatgactttgataatttta 32952214  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    ||||||||  |||||||||||||||||| ||||||||    
T  32952213 aaagactataaaagatttcaatggatttaattcataa 32952177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 24130461 - 24130588
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||| |||||||||||||    
T  24130461 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttg---------catgattttgatgatttta 24130551  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  24130552 aaagactattaaggatttcaatggatttaattcataa 24130588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 27453708 - 27453843
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||| |||||||||||||| || ||||||||||||||||||| |||| ||||||||||||||| | | ||||||||||||||| || |||||||    
T  27453708 gggtgtattgaattaggattttaaatgataatttttgtttaaaaaagttttgaagattttaaaagacttagcataattttgatgactttaattattttaa 27453807  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||||||||||||| ||||| ||||||||    
T  27453808 aagactattaaagatttcaatagatttaattcataa 27453843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 162 - 287
Target Start/End: Original strand, 39479133 - 39479258
Alignment:
Q  162 attggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagact 261  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||| |||||||||    
T  39479133 attggattagaattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagattttagaggattttgatgactttgatgattataaaagact 39479232  T
Q  262 actaaagatttcaatggattttattc 287  Q
    | ||| ||||| ||||||||| ||||    
T  39479233 attaaggattttaatggatttaattc 39479258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 7246547 - 7246635
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgacttt 244  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7246547 gggtgtattggattatgattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttggagaattttgatgacttt 7246635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 23465573 - 23465437
Alignment:
Q  156 gggtgtattggattaggatttt-aaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||| || |  |||||||| | |||||||||||||    
T  23465573 gggtgtattggattaggatttttaaaggacaatttttgtttaaaaaagtcttaagaattttaaaagactctgcaggattttgattaatttgatgatttta 23465474  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    ||||| || ||| ||||||||| ||||| ||||||||    
T  23465473 aaagattattaaggatttcaatagatttaattcataa 23465437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 28542161 - 28542035
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||  |||||||||||         |||||    
T  28542161 gggtgtattggattaggattttaaaggataatttttgtttaaaaaagtattgagaattttaaaagactttggaggattttgatgac---------tttaa 28542071  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||||||||||||||||||| ||||||||    
T  28542070 aagactattaaagatttcaatggatttaattcataa 28542035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 161 - 291
Target Start/End: Original strand, 46635241 - 46635362
Alignment:
Q  161 tattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||         || |||||||||||||||||||    
T  46635241 tattggattaggattttaaaggacaatttttgtttaaaaaagttttgaggattttaaaagactttgcaa---------gattttgatgattttaaaagac 46635331  T
Q  261 tactaaagatttcaatggattttattcataa 291  Q
    || ||| ||||||||||||||| ||||||||    
T  46635332 tattaaggatttcaatggatttaattcataa 46635362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 31314423 - 31314508
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatga 240  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||    
T  31314423 ggggtgtattggattaagattttaaaggacaatttttgtttaaaaaagtattgaggattttaaaagactttgtaagattttgatga 31314508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 37046093 - 37046177
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatga 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  ||||||||||    
T  37046093 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtattgatgattttaaaagactttggaggattttgatga 37046177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 156 - 288
Target Start/End: Complemental strand, 41321365 - 41321242
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||||||         || ||||||||||||||    
T  41321365 gggtgtattggattaggattttaaaagatgatttttgtttaaaaaagtcttaaggattttaaaagactttggaa---------gattttgatgattttaa 41321275  T
Q  256 aagactactaaagatttcaatggattttattca 288  Q
    ||||||| ||| ||||||||||||||| |||||    
T  41321274 aagactattaaggatttcaatggatttaattca 41321242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 49469886 - 49469760
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||          | || ||||||||||||||    
T  49469886 gggtgtattggattagaattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaggactttg---------aaggattttgatgattttaa 49469796  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| |||||||||| |||| ||||||||    
T  49469795 aagactattaacgatttcaatgaatttaattcataa 49469760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 155 - 262
Target Start/End: Complemental strand, 5105036 - 5104929
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||| |||||||||   | |||||||||||| |||||||||||||||||| || ||||| |||||||| | |||||||    
T  5105036 ggggtgtattggattaggattttaaaagacaattttgtataaaaaaagtcttgtggattttaaaagactttgaaagattttaatgacttttaagatttta 5104937  T
Q  255 aaagacta 262  Q
    ||||||||    
T  5104936 aaagacta 5104929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 155 - 262
Target Start/End: Original strand, 44770484 - 44770591
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| || | |||||||||||| ||||    ||||| ||||||||||||||||||    
T  44770484 ggggtgtattgaattatgattttaaaggacaatttttgtttaaaaaagttttaaagattttaaaagattttgttggattttaatgactttgatgatttta 44770583  T
Q  255 aaagacta 262  Q
    ||||||||    
T  44770584 aaagacta 44770591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 26340654 - 26340557
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| |  ||||| |||||||| ||||||||||    
T  26340654 ggtgtattggattaggattttaaaggacaatttttattt-aaaaagtcttaaggattttaaaagactttgcatgattttaatgactttcatgattttaa 26340557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 11090868 - 11090759
Alignment:
Q  154 aggggtgtattggattaggat-tttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattt 252  Q
    |||||||||||||||||| || ||||||||||||| |||| ||||||||||||||| |||||||||||| |||| |  ||||  |||||||| |||||||    
T  11090868 aggggtgtattggattagaatctttaaaggacaatgtttgcttaaaaaagtcttgaagattttaaaagattttgtatgatttcaatgactttcatgattt 11090769  T
Q  253 taaaagacta 262  Q
    ||||||||||    
T  11090768 taaaagacta 11090759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 42722042 - 42721943
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||| |||||||||||||| ||||| |||||||| ||||| ||||||||||||||||||| |  ||||| |||||||| |||||||||    
T  42722042 ggggtgtattggattaagattttaaaggacattttttatttaaaaa-gtcttaaggattttaaaagactttgcatgattttaatgactttcatgatttta 42721944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 16020725 - 16020604
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||||||||| |||||||||||||||||||||||||||||     ||||||||||||||||||||         || || || |||||||||||    
T  16020725 gggtgtattggattagaattttaaaggacaatttttgtttaaaaaa-----gaggattttaaaagactttg---------gaggatttagatgattttaa 16020640  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||||||||| ||||||||    
T  16020639 aagactattaaggatttcaatggatttaattcataa 16020604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 155 - 262
Target Start/End: Complemental strand, 20022031 - 20021924
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||| || ||||||| |||||||||| ||||||||||||  | |||||||||||| |||| |  ||||| |||||||| |||||||||    
T  20022031 ggggtgtattggattatgactttaaagaacaatttttgcttaaaaaagtctcaaagattttaaaagattttgtaggattttaatgactttcatgatttta 20021932  T
Q  255 aaagacta 262  Q
    ||||||||    
T  20021931 aaagacta 20021924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 260
Target Start/End: Original strand, 41581433 - 41581536
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaa 256  Q
    ||||||||| |||| |||||||||  ||||||||| ||||||||||||||||| | |||||||||||||| | |||||| |||||| | |||||||||||    
T  41581433 ggtgtattgaattatgattttaaataacaatttttatttaaaaaagtcttgagaaatttaaaagactttgtataattttaatgactctcatgattttaaa 41581532  T
Q  257 agac 260  Q
    ||||    
T  41581533 agac 41581536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 8712429 - 8712363
Alignment:
Q  159 tgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagacttt 225  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  8712429 tgtattggattatgattttaaaggacaatttttgcttaaaaaagtcttgaagattttaaaagacttt 8712363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 1113756 - 1113677
Alignment:
Q  212 ttttaaaagactttggaaaattttgatgactttgatgattttaaaagactactaaagatttcaatggattttattcataa 291  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||||||| |||| |||| ||||||||| ||||||||    
T  1113756 ttttaaaagactttgcaggattttgatgactttgatgattttaaaagactattaaacattttaatggatttaattcataa 1113677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 259
Target Start/End: Complemental strand, 9163773 - 9163671
Alignment:
Q  158 gtgtattggattaggattttaaaggacaatttttgtttaaaaaagtc-ttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaa 256  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||| ||||||||||||||||| |||  |  ||||| |||||||| |||||||||||    
T  9163773 gtgtattggattatgattttaaaagataatttttgtttaaaaatgtctttgaggattttaaaagattttccatgattttaatgacttttatgattttaaa 9163674  T
Q  257 aga 259  Q
    |||    
T  9163673 aga 9163671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 28371501 - 28371399
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaa 256  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| || |  ||||||||| | |||  | |||||| |||||||||||| |||||||    
T  28371501 ggtgtattgaattaggattttaaaggacaatttttgcttaaaaaagttttaaacattttaaaatattttctagaattttaatgactttgatggttttaaa 28371402  T
Q  257 aga 259  Q
    |||    
T  28371401 aga 28371399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 36478837 - 36478919
Alignment:
Q  180 aggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagacta 262  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||| |  ||||| |||||||| | | |||||||||||||    
T  36478837 aggacaatttttgcttaaaaaagtcttgaagattttaaaagactttgtaggattttaatgactttcacggttttaaaagacta 36478919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 21309040 - 21309152
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||| ||||||||| || || |||| ||||||||| || ||  | ||||||||||| ||| |||||||| |||||||| | |||||||    
T  21309040 ggggtgtattggattaagattttaaaagataaattttatttaaaaaaatcatgtaggttttaaaagacattgtaaaattttaatgacttttaagatttta 21309139  T
Q  255 aaagactactaaa 267  Q
    ||| |||| ||||    
T  21309140 aaacactattaaa 21309152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 45341665 - 45341595
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttg 226  Q
    ||||||||||| ||||| ||||||||||||||||||||||| |||| ||||| || ||||||||||||||||    
T  45341665 ggggtgtattgcattagaattttaaaggacaatttttgttt-aaaaggtcttaagaattttaaaagactttg 45341595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 7249548 - 7249610
Alignment:
Q  162 attggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactt 224  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||| || ||||||||||||||    
T  7249548 attggattaggattttaatggataatttttgtttaaaaaaatctttagtattttaaaagactt 7249610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 12913936 - 12913886
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtct 205  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  12913936 ggggtgtattggattaagattttaaaggacaatttttgcttaaaaaagtct 12913886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 1045390 - 1045321
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtc-ttgaggattttaaaagacttt 225  Q
    ||||||||||||| | ||||||| ||| |||||||||||||||||||| || ||||||||||||||||||    
T  1045390 ggtgtattggattggaattttaatggataatttttgtttaaaaaagtctttaaggattttaaaagacttt 1045321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 155 - 259
Target Start/End: Original strand, 37369432 - 37369535
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||||||||||||  |||| ||||   | ||||||||| | ||||||||||||||| || || ||||| |||||||| | |||||||    
T  37369432 ggggtgtattggattaggattttaaaaaacaa-ttttacatgaaaaagtctagtggattttaaaagactatgcaagattttaatgacttttaagatttta 37369530  T
Q  255 aaaga 259  Q
    |||||    
T  37369531 aaaga 37369535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 7853813 - 7853916
Alignment:
Q  159 tgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaag 258  Q
    ||||||||||||  |||||||| ||||||||| |  | ||||| ||| | | ||||||||||| | || |||||||| |||||||| | |||||||||||    
T  7853813 tgtattggattaatattttaaaagacaattttagcatgaaaaaatctagtgaattttaaaagaatatgcaaaattttaatgacttttaagattttaaaag 7853912  T
Q  259 acta 262  Q
    ||||    
T  7853913 acta 7853916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 16019912 - 16019850
Alignment:
Q  200 aagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagacta 262  Q
    |||||| | |||||||||||||||||| || ||||| |||||||| | |||||||||||||||    
T  16019912 aagtctagtggattttaaaagactttgcaagattttcatgacttttaagattttaaaagacta 16019850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 28099684 - 28099734
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtct 205  Q
    ||||||||||| |||||||||||||| |||||||||||| | |||||||||    
T  28099684 ggggtgtattgaattaggattttaaaagacaatttttgtatgaaaaagtct 28099734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 36727579 - 36727629
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtct 205  Q
    ||||||||||||||||| |||||| |||| |||||||| ||||||||||||    
T  36727579 ggggtgtattggattagtattttagaggaaaatttttgcttaaaaaagtct 36727629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 32323163 - 32323098
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 221  Q
    ||||||||||||||||||||||||| ||| |||||  |  ||||||||||| | ||||||||||||    
T  32323163 gggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaaga 32323098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 5442485 - 5442418
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  5442485 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 5442418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 27769158 - 27769091
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  27769158 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 27769091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 32683135 - 32683202
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  32683135 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 32683202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 48262169 - 48262102
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  48262169 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 48262102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 19740811 - 19740857
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagt 203  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||||    
T  19740811 gggtgtatcggattaggattttaaaggataa-ttttgtttaaaaaagt 19740857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 56444378 - 56444429
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtct 205  Q
    |||||||||||| ||||| |||||||||||||||||||   |||||||||||    
T  56444378 aggggtgtattgaattagcattttaaaggacaatttttacataaaaaagtct 56444429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 31314501 - 31314550
Alignment:
Q  242 tttgatgattttaaaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||||||||||| |||| ||| ||||||||||||||| ||| ||||    
T  31314501 tttgatgattttaaaaaactattaaggatttcaatggatttaatttataa 31314550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 37046170 - 37046219
Alignment:
Q  242 tttgatgattttaaaagactactaaagatttcaatggattttattcataa 291  Q
    ||||||||||||||||||||  ||| ||||||||| ||||| ||||||||    
T  37046170 tttgatgattttaaaagactgttaaggatttcaatagatttaattcataa 37046219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 49833973 - 49834038
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 221  Q
    |||| |||||||||||||||||||| ||| |||||  |  ||||||||||| | ||||||||||||    
T  49833973 gggtatattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaaga 49834038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 23988292 - 23988256
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttt 190  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  23988292 aggggtgtattggattaggattttaaaagactatttt 23988256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 54342241 - 54342174
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    ||||||||||||||||| |||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  54342241 ggggtgtattggattagaattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 54342174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 158 - 291
Target Start/End: Original strand, 33655584 - 33655717
Alignment:
Q  158 gtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaa 257  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  33655584 gtgtattagattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaaaa 33655683  T
Q  258 gactactaaagatttcaatggattttattcataa 291  Q
    ||||| ||| ||||||||||||||| ||||||||    
T  33655684 gactattaaggatttcaatggatttaattcataa 33655717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 21147826 - 21147690
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  || ||||||||||||||||||||||||    
T  21147826 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagattttccaagattttgatgactttgatgatttta 21147727  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  21147726 aaagactattaaggatttcaatggatttaattcataa 21147690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 157 - 291
Target Start/End: Original strand, 7016268 - 7016402
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaa 256  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  7016268 ggtgtatttgattaggattttaaaggacaatttttgtttaaaaaagttttgaggattttaaaagactttgcaagattttgatgactttgatgattttaaa 7016367  T
Q  257 agactactaaagatttcaatggattttattcataa 291  Q
    |||||| ||| ||||||||||||||| ||||||||    
T  7016368 agactattaaggatttcaatggatttaattcataa 7016402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 4771768 - 4771903
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | |||||| |||||||||||||||||||    
T  4771768 gggtgtatttgattaggattttaaaggacaatttttgtttaaaaaagttttgaggattttaaaagactttacagaattttaatgactttgatgattttaa 4771867  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||||||||| ||||||||    
T  4771868 aagactattaaggatttcaatggatttaattcataa 4771903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 27458680 - 27458806
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||    
T  27458680 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagacttttaaagattttgatgactttgatgattttaa 27458779  T
Q  256 aagactactaaagatttcaatggattt 282  Q
    |||| || ||| |||||||||| ||||    
T  27458780 aagattattaaggatttcaatgtattt 27458806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 5272438 - 5272574
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||    | |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  5272438 ggggtgtattggattaggattttaaaggacaatttttgtttaaattttttttgaggattttaaaagactttgcaagattttgatgactttgatgatttta 5272537  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||||||||||||||||||| ||| ||||    
T  5272538 aaagactattaaagatttcaatggatttaattaataa 5272574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 139897 - 139760
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtctt-gaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||| || ||||||||||||||||| |  ||||||||||||||||| |||||    
T  139897 ggggtgtattggattatgattttaaaggataatttttgtttaaaaaagtctttgaagattttaaaagactttgcaggattttgatgactttgataatttt 139798  T
Q  254 aaaagactactaaagatttcaatggattttattcataa 291  Q
    ||||||||| ||| ||||||||| ||||| ||||||||    
T  139797 aaaagactattaaggatttcaatagatttaattcataa 139760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 849970 - 849843
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||         || |||||||||||||    
T  849970 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttataagactttgcaa---------gattttgatgatttta 849880  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  849879 aaagactattaaggatttcaatggatttaattcataa 849843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 159 - 291
Target Start/End: Original strand, 43319232 - 43319355
Alignment:
Q  159 tgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaag 258  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||         || |||||||||||||||||    
T  43319232 tgtattggattaggattttaaaagacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaa---------gattttgatgattttaaaag 43319322  T
Q  259 actactaaagatttcaatggattttattcataa 291  Q
    |||| ||| ||||||||||||||| ||||||||    
T  43319323 actattaaggatttcaatggatttaattcataa 43319355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 164 - 291
Target Start/End: Complemental strand, 6461408 - 6461290
Alignment:
Q  164 tggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagactac 263  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| ||||          | || |||||||||||||||||||||     
T  6461408 tggattaggattttaaaggataatttttgtttaaaaaagttttgagaattttaaaagattttg---------caggattttgatgattttaaaagactat 6461318  T
Q  264 taaagatttcaatggattttattcataa 291  Q
    ||||||||||||||||||| ||||||||    
T  6461317 taaagatttcaatggatttaattcataa 6461290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 43319651 - 43319588
Alignment:
Q  163 ttggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttg 226  Q
    |||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||    
T  43319651 ttggattaggattttaaaagataatttttgtttaaaaaagttttgaggattttaaaagactttg 43319588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 259
Target Start/End: Original strand, 9839977 - 9840079
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaa 256  Q
    ||||||||  ||| |||||||||| |||||||||||| ||||||||||||| ||||||||||| |||||| || ||||  |||||||| | |||||||||    
T  9839977 ggtgtatttaatttggattttaaaagacaatttttgtataaaaaagtcttgtggattttaaaaaactttgaaagatttgaatgacttttaagattttaaa 9840076  T
Q  257 aga 259  Q
    |||    
T  9840077 aga 9840079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 155 - 259
Target Start/End: Original strand, 28593000 - 28593104
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||| |||||||||   | ||||| |||||| ||||||||||| ||| || || ||||| |||||||| | |||||||    
T  28593000 ggggtgtattggattaggattttaaaagacaattttacatgaaaaaggtcttgtggattttaaaatactatgaaagattttaatgacttttaagatttta 28593099  T
Q  255 aaaga 259  Q
    |||||    
T  28593100 aaaga 28593104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 262
Target Start/End: Complemental strand, 8408789 - 8408687
Alignment:
Q  160 gtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaaga 259  Q
    |||||| ||||| |||||||||||||| |||   ||||||| ||||||| ||||||||||||||||| |  | ||| |||||||| ||||||||||||||    
T  8408789 gtattgaattagaattttaaaggacaactttcacttaaaaatgtcttgaagattttaaaagactttgtatgaatttaatgactttcatgattttaaaaga 8408690  T
Q  260 cta 262  Q
    |||    
T  8408689 cta 8408687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 32157573 - 32157654
Alignment:
Q  208 aggattttaaaagactttggaaaattttgatgactttgatgattttaaaagactactaaagatttcaatggattttattcat 289  Q
    |||||||||||||||||||    |||||||||| |||||| |||||||||||||| ||| ||||||||||||||| ||||||    
T  32157573 aggattttaaaagactttgtgtgattttgatgattttgattattttaaaagactattaaggatttcaatggatttaattcat 32157654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 4239580 - 4239648
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| |||||  |  ||||||||||| | ||||||||||||||    
T  4239580 ggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagact 4239648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 262
Target Start/End: Original strand, 9688372 - 9688476
Alignment:
Q  158 gtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaa 257  Q
    |||||||||||||||| |||| | ||||||||||   | ||||||| | | ||||||||||||| |||| || ||| | |||||||| | ||||||||||    
T  9688372 gtgtattggattaggaatttagaagacaatttttacatgaaaaagtttagtggattttaaaagattttgtaagattgtcatgacttttaagattttaaaa 9688471  T
Q  258 gacta 262  Q
    |||||    
T  9688472 gacta 9688476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 13999214 - 13999282
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| |||||  |  ||||||||||| | ||||||||||||||    
T  13999214 ggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagact 13999282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 30581995 - 30582061
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||| ||||| |||| |||| ||||||||||| | ||||||||||| |||||||||||||||    
T  30581995 gggtgtattgaattagaatttaaaag-acaatttttgtatgaaaaagtcttgtggattttaaaagact 30582061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 40012817 - 40012884
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagac 222  Q
    |||||||||||||||||||||||||| ||| |||||  |  ||||||||||| | |||||||||||||    
T  40012817 ggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagac 40012884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 7947134 - 7947200
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagac 222  Q
    ||||||||||| |||||||||||||| ||| | |||| || ||||||||||| | |||||||||||||    
T  7947134 ggggtgtattgaattaggattttaaaagacta-ttttattaaaaaaagtctttaagattttaaaagac 7947200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 13717190 - 13717124
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 221  Q
    ||||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||    
T  13717190 aggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaaga 13717124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 262
Target Start/End: Original strand, 28346554 - 28346640
Alignment:
Q  175 tttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagacta 262  Q
    |||||| || ||||||||| ||||||||||||| ||||||||||   || || || ||||| |||||||| | |||||||||||||||    
T  28346554 tttaaaagataatttttgtataaaaaagtcttgtggattttaaact-ctatgcaagattttaatgacttttaagattttaaaagacta 28346640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 13927027 - 13926959
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| |||||  |  | ||||||||| | ||||| ||||||||    
T  13927027 ggggtgtattggattaggattttaaaagactattttaataaataaaagtctttaagatttaaaaagact 13926959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 1e-54; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 24776972 - 24776836
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  24776972 ggggtgtattggattaggattttaaaggacaatttttctttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgatttta 24776873  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||| ||||    
T  24776872 aaagactattaaggatttcaatggatttaatttataa 24776836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 21136589 - 21136725
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  21136589 ggggtgttttggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgtaggattttgatgactttgatgatttta 21136688  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  21136689 aaagactattaaggatttcaatggatttaattcataa 21136725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 22551374 - 22551510
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  22551374 ggggtgtattggattaagattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgatttta 22551473  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||| | ||| ||||||||||||||| ||| ||||    
T  22551474 aaagaccattaaggatttcaatggatttaatttataa 22551510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 32125944 - 32125808
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  32125944 ggggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgtagaattttgatgactttgatgatttta 32125845  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||| ||||| ||||| ||||||||    
T  32125844 aaagactattaaggatgtcaatagatttaattcataa 32125808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 44766552 - 44766416
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  44766552 ggggtgtattgaattaggattttaaaagacaatttttgtttaaaaaagtcttgaggattttaaaagattttgcaagattttgatgactttgatgatttta 44766453  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||| ||| ||||||||||||||| ||||||||    
T  44766452 aaagactattaaggatttcaatggatttaattcataa 44766416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 161 - 291
Target Start/End: Original strand, 31170101 - 31170231
Alignment:
Q  161 tattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagac 260  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  31170101 tattggattaggattttaaaggacaatttttgttttaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaaaagac 31170200  T
Q  261 tactaaagatttcaatggattttattcataa 291  Q
    || ||| ||||||||| ||||| ||||||||    
T  31170201 tattaaggatttcaatagatttaattcataa 31170231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 35317785 - 35317649
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||||||    
T  35317785 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtattgaggattttaaaagactttgtaagattttgattactttgatgatttta 35317686  T
Q  255 aaagactactaaagatttcaatggattttattcataa 291  Q
    ||| |||| ||| ||||||||||||||| ||| ||||    
T  35317685 aaaaactattaaggatttcaatggatttaattaataa 35317649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 161 - 291
Target Start/End: Original strand, 14198189 - 14198319
Alignment:
Q  161 tattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagac 260  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  14198189 tattggattaggattttaaagaacaatttttgtttaaaaaagttttgaggattttaaaagactttacaaaattttgatgactttgatgattttaaaagac 14198288  T
Q  261 tactaaagatttcaatggattttattcataa 291  Q
    || ||| ||||| ||||||||| ||||||||    
T  14198289 tattaaggattttaatggatttaattcataa 14198319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 16270448 - 16270318
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgttt-aaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  16270448 ggggtgtattggattaggattttaaaggataattttttttttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgatttt 16270349  T
Q  254 aaaagactactaaagatttcaatggatttta 284  Q
    ||||||||| ||| |||||||||||||||||    
T  16270348 aaaagactattaaggatttcaatggatttta 16270318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 9120788 - 9120653
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  || |||||||||| |||||| |||||||    
T  9120788 gggtgtattagattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagacttttaaagattttgatgattttgataattttaa 9120689  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||||||||| ||||||||    
T  9120688 aagactattaaggatttcaatggatttaattcataa 9120653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 1790081 - 1789960
Alignment:
Q  161 tattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagac 260  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  1790081 tattagattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgtaagattttgatgactttgatgattttaaaagac 1789982  T
Q  261 tactaaagatttcaatggattt 282  Q
    || ||| ||||| || ||||||    
T  1789981 tattaaggattttaaaggattt 1789960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 305097 - 305231
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |   ||||||| ||||||| ||||||||    
T  305097 gggtgtattggattaggattttaaag-acaatttttgtttaaaaaaatcttgaggattttaaaagactttgcagggttttgataactttgaagattttaa 305195  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||||||||| ||||||||    
T  305196 aagactattaaggatttcaatggatttaattcataa 305231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 43848274 - 43848139
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||  |  ||||||||||||| |||||||||||    
T  43848274 gggtgtattggattatgattttaaaagacaatttttgtttaaaaaaatcttgagaattttaaaagactttacaggattttgatgacttagatgattttaa 43848175  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||| ||||| ||||||||    
T  43848174 aagactattaaggatttcaatagatttaattcataa 43848139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 291
Target Start/End: Complemental strand, 12408044 - 12407916
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||         || ||||||||||||    
T  12408044 aggggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaa---------gattttgatgatttt 12407954  T
Q  254 aaaagactactaaagatttcaatggattttattcataa 291  Q
    ||||||||| ||| ||||||||||||||| ||||||||    
T  12407953 aaaagactattaaggatttcaatggatttaattcataa 12407916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 291
Target Start/End: Complemental strand, 12420104 - 12419976
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||         || ||||||||||||    
T  12420104 aggggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaa---------gattttgatgatttt 12420014  T
Q  254 aaaagactactaaagatttcaatggattttattcataa 291  Q
    ||||||||| ||| ||||||||||||||| ||||||||    
T  12420013 aaaagactattaaggatttcaatggatttaattcataa 12419976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 20605598 - 20605528
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagacttt 225  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20605598 ggggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagacttt 20605528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 154 - 255
Target Start/End: Original strand, 11997193 - 11997293
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||||||| || ||||||||||||||||||| |  ||||| |||||||| ||||||||    
T  11997193 aggggtgtattggattatgattttaaaggataatttttgttt-aaaaagttttaaggattttaaaagactttgcatgattttaatgactttcatgatttt 11997291  T
Q  254 aa 255  Q
    ||    
T  11997292 aa 11997293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 26600881 - 26600972
Alignment:
Q  168 ttaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaaga 259  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||| |||| |||| || ||||  |||| |||||| |||||||||||    
T  26600881 ttaggattttaaaggataatttttgtttaaaaaaatcttgaggattttacaagattttgcaagatttccatgattttgattattttaaaaga 26600972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 155 - 259
Target Start/End: Original strand, 20156344 - 20156448
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||| ||| |||||||| | ||||||||| |  |||||||||||| | || || ||||| |||||||| | |||||||    
T  20156344 ggggtgtattggattaggattttaaaagactatttttgtatgaaaaagtctagtagattttaaaagattatgtaagattttaatgacttttaggatttta 20156443  T
Q  255 aaaga 259  Q
    |||||    
T  20156444 aaaga 20156448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 253
Target Start/End: Original strand, 10124997 - 10125091
Alignment:
Q  159 tgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| |  |  ||||||||||| |||| |  ||||| |||||||| ||||||||    
T  10124997 tgtattagattaggattttaaaggacaatttttgcttaaaaaagtttcaaatattttaaaagattttgtaggattttaatgactttcatgatttt 10125091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 259
Target Start/End: Original strand, 34027516 - 34027621
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    ||||||||||| ||||||||||||||| ||  |||||||| | ||||| ||| | | ||||||||||| | || || ||||| |||||||| | ||||||    
T  34027516 aggggtgtatttgattaggattttaaaagattatttttgtatgaaaaaatctagtgaattttaaaagattatgcaagattttaatgacttttaggatttt 34027615  T
Q  254 aaaaga 259  Q
    ||||||    
T  34027616 aaaaga 34027621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 1188676 - 1188776
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttta 254  Q
    |||||||||||||||||||||||||| || ||||||||| | |||||||||   | ||||||||||| | || || ||||  |||||||| | |||||||    
T  1188676 ggggtgtattggattaggattttaaaagaaaatttttgtatgaaaaagtctaatgaattttaaaagattatgcaagatttgaatgacttttaagatttta 1188775  T
Q  255 a 255  Q
    |    
T  1188776 a 1188776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 21988310 - 21988247
Alignment:
Q  196 aaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaaga 259  Q
    |||||||| ||| |||||||||||||||||| || ||||| |||||||| | ||||||||||||    
T  21988310 aaaaaagtgttgtggattttaaaagactttgaaagattttaatgacttttaagattttaaaaga 21988247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 13436091 - 13436180
Alignment:
Q  173 attttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagacta 262  Q
    ||||||||||| || ||||||||||||||||||| | | |||||||| | |||  |  ||||| |||||||| |||||||||||| ||||    
T  13436091 attttaaaggataaattttgtttaaaaaagtcttcaaggttttaaaaaaatttataggattttaatgactttcatgattttaaaaaacta 13436180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 3464681 - 3464614
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||| | ||| | ||||  ||||||||||||| | ||||||||||||||    
T  3464681 ggggtgtattggattaggattttacaagacta-ttttaattaaaaaagtctttaagattttaaaagact 3464614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 18178366 - 18178299
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  18178366 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 18178299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 21988386 - 21988327
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggatttt 215  Q
    ||||||||||  ||| ||||||||||||||||||||||| | ||||||||||| |||||||    
T  21988386 ggggtgtattcaatttggattttaaaggacaatttttgtat-aaaaagtcttgtggatttt 21988327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 26789879 - 26789812
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | ||||||||||||||    
T  26789879 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaaaagact 26789812  T

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Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 190
Target Start/End: Complemental strand, 33136691 - 33136656
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttt 190  Q
    |||||||||||||||||||||||||| |||||||||    
T  33136691 ggggtgtattggattaggattttaaaagacaatttt 33136656  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 8173842 - 8173784
Alignment:
Q  163 ttggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaaga 221  Q
    |||||||| |||||||||  ||| ||||||||||||||||| |||  ||||||||||||    
T  8173842 ttggattatgattttaaaatacattttttgtttaaaaaagttttgcagattttaaaaga 8173784  T

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Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 43079576 - 43079510
Alignment:
Q  157 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    ||||||||||||||| |||||||| ||| |||||  |  ||||||||||| | ||||||||||||||    
T  43079576 ggtgtattggattagaattttaaaagactattttaataaaaaaaagtctttaagattttaaaagact 43079510  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 380004 - 379935
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtc-ttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| |||||  |  ||||||||| || | ||||||||||||||    
T  380004 ggggtgtattggattaggattttaaaagactattttaataaaaaaaagtcttttaagattttaaaagact 379935  T

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Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 28845673 - 28845605
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    ||||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | |||||| |||||||    
T  28845673 aggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagatttttaaagact 28845605  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 25289249 - 25289182
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | |||||| |||| | ||||||||||||||    
T  25289249 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaaatctttaagattttaaaagact 25289182  T

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Target: scaffold0151 (Bit Score: 108; Significance: 4e-54; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 24533 - 24668
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  24533 gggtgtattggattagaattttaaaggacaatttttgtttaaaaaagtattgaggattttaaaagactttggaggattttgatgactttgatgattttaa 24632  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| ||| ||||||||||||||| ||||||||    
T  24633 aagactattaaggatttcaatggatttaattcataa 24668  T

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Target: scaffold0151; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 218 - 291
Target Start/End: Original strand, 37112 - 37185
Alignment:
Q  218 aagactttggaaaattttgatgactttgatgattttaaaagactactaaagatttcaatggattttattcataa 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  37112 aagactttggaggattttgatgactttgatgattttaaaagactattaaggatttcaatggatttaattcataa 37185  T

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Target: scaffold0400 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 14593 - 14716
Alignment:
Q  168 ttaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagactactaaa 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||| |||     
T  14593 ttaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagattttgcaagattttgatgactttgatgattttaaaagactattaag 14692  T
Q  268 gatttcaatggattttattcataa 291  Q
    ||||| ||||||||| ||||||||    
T  14693 gatttaaatggatttaattcataa 14716  T

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Target: scaffold0365 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 15236 - 15359
Alignment:
Q  168 ttaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaaaagactactaaa 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||| |||     
T  15236 ttaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagattttgcaagattttgatgactttgatgattttaaaagactattaag 15335  T
Q  268 gatttcaatggattttattcataa 291  Q
    ||||| ||||||||| ||||||||    
T  15336 gatttaaatggatttaattcataa 15359  T

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Target: scaffold0113 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 37666 - 37792
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgattttaa 255  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||         ||||| ||||||||||||||    
T  37666 gggtgtattggattagaattttaaaggataatttttgtttaaaaaagtcttgagaattttaaaagattttg---------gatgattttgatgattttaa 37756  T
Q  256 aagactactaaagatttcaatggattttattcataa 291  Q
    ||||||| |||  |||||||||||||| ||||||||    
T  37757 aagactattaagaatttcaatggatttaattcataa 37792  T

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Target: scaffold0287 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 259
Target Start/End: Original strand, 10862 - 10967
Alignment:
Q  154 aggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaaaattttgatgactttgatgatttt 253  Q
    ||||||||||||||||||||||||||| |||||||||| | | ||||||||| | |||||| |||||| | || || ||| | |||||||| | ||||||    
T  10862 aggggtgtattggattaggattttaaaagacaatttttatatgaaaaagtctagtggatttaaaaagattatgcaagattgtaatgacttttaggatttt 10961  T
Q  254 aaaaga 259  Q
    ||||||    
T  10962 aaaaga 10967  T

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Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 36401 - 36468
Alignment:
Q  156 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    ||||||||||||||||||||||||| ||| |||||  |  ||||||||||| | ||||||||||||||    
T  36401 gggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagact 36468  T

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Target: scaffold0276 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 213 - 262
Alignment:
Q  242 tttgatgattttaaaagactactaaagatttcaatggattttattcataa 291  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||| ||||    
T  213 tttgatgattttaaaagactattaaggatttcaatggatttaatttataa 262  T

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Target: scaffold0940 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 3574 - 3641
Alignment:
Q  155 ggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagact 223  Q
    |||||||||||||||||||||||||| ||| | ||||  | ||||||||||| | |||||||| |||||    
T  3574 ggggtgtattggattaggattttaaaagacta-ttttaataaaaaaagtctttaagattttaagagact 3641  T

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