View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0830_low_88 (Length: 332)
Name: NF0830_low_88
Description: NF0830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0830_low_88 |
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Alignment Details
Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 51216452 - 51216702
Alignment:
| Q |
1 |
aaatcattcactatgtccaataacttgatgttttatattttgagtttttacaagccatgttgctcagatactctggataatttgttacaacttacaatag |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51216452 |
aaatcattcactatgtccaataacttgatgttttatattttgagtttttacaagccatgttgctcagatactctggataatttgttacaacttacaatag |
51216551 |
T |
|
| Q |
101 |
tacaattagaaatacaagctattttcataccaaatatcttcatatatatttttcctggtaaaacaagatgttgagctcaagggtttaatgagtctcagtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51216552 |
tacaattagaaatacaagctattttcataccaaatatcttcatatatatttttcctggtaaaacaagatgttgagctcaagggtttaatgagtctcagtt |
51216651 |
T |
|
| Q |
201 |
aagatcaaatcaattcgacacacctgagttcaatccttggctagaataatc |
251 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
51216652 |
aagatcaaatcaatccgacacacctgagttcaatccttggctagaataatc |
51216702 |
T |
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