View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0831_high_34 (Length: 345)
Name: NF0831_high_34
Description: NF0831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0831_high_34 |
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Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 83 - 337
Target Start/End: Complemental strand, 7630157 - 7629904
Alignment:
| Q |
83 |
tttttattcagtatattctattccattaannnnnnnaaattaaatataaataaataattatattgctcaatcctagtattgttcaaatacaaatttgact |
182 |
Q |
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| T |
7630157 |
tttttattcagtatattctgttccattaatttttt-aaatcaaatataaataaataattatattgttcaatcctagtattgtgtaaatacaaatttgact |
7630059 |
T |
|
| Q |
183 |
ttgtgggcgatttgatttttcctattctaagtttgaagaatcaaccaataggccccaagtattttgattaaatgttccaggttaggtcaaaacacatagg |
282 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7630058 |
ttgtggacgatttgatttttcctattctaagtttgaagaatcaaccaataggccccaagtattttgattaaatgttccaggttaggtcaaaacacatagg |
7629959 |
T |
|
| Q |
283 |
agtaatttataagacaaaattattttgttcaagtttggagaattcacttcatctc |
337 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7629958 |
agtaatttataagacaaaattattttgttcaagtttggagaattcacttcatctc |
7629904 |
T |
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