View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0833_high_18 (Length: 228)

Name: NF0833_high_18
Description: NF0833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0833_high_18
NF0833_high_18
[»] chr8 (51 HSPs)
chr8 (114-215)||(24178310-24178411)
chr8 (1-116)||(38482774-38482889)
chr8 (1-116)||(38128529-38128644)
chr8 (1-115)||(11994024-11994138)
chr8 (1-99)||(14228321-14228419)
chr8 (1-115)||(34981972-34982086)
chr8 (1-115)||(35052196-35052310)
chr8 (1-118)||(39303495-39303613)
chr8 (1-113)||(16656843-16656955)
chr8 (1-116)||(25703560-25703675)
chr8 (1-116)||(25812731-25812846)
chr8 (1-99)||(14263687-14263785)
chr8 (1-99)||(33935059-33935157)
chr8 (1-99)||(4057431-4057529)
chr8 (1-99)||(23430052-23430150)
chr8 (1-99)||(26062850-26062948)
chr8 (1-99)||(40228438-40228536)
chr8 (1-104)||(1202438-1202541)
chr8 (1-108)||(45281368-45281475)
chr8 (1-99)||(34046994-34047092)
chr8 (1-117)||(15596487-15596603)
chr8 (9-108)||(13328121-13328220)
chr8 (1-99)||(23848555-23848653)
chr8 (1-117)||(43641970-43642086)
chr8 (1-112)||(1245455-1245566)
chr8 (1-99)||(9954792-9954890)
chr8 (1-78)||(40603871-40603948)
chr8 (1-117)||(18291606-18291722)
chr8 (1-116)||(41308038-41308154)
chr8 (5-115)||(8453219-8453329)
chr8 (1-115)||(10180513-10180627)
chr8 (2-99)||(32010083-32010180)
chr8 (1-99)||(12342613-12342711)
chr8 (8-117)||(14061130-14061239)
chr8 (1-64)||(9808008-9808071)
chr8 (1-108)||(21651736-21651843)
chr8 (1-115)||(2456098-2456212)
chr8 (1-59)||(3513500-3513558)
chr8 (1-115)||(12248753-12248867)
chr8 (1-115)||(18842672-18842786)
chr8 (1-78)||(7605919-7605996)
chr8 (37-117)||(2888449-2888529)
chr8 (1-117)||(17313285-17313401)
chr8 (13-108)||(11707444-11707539)
chr8 (1-108)||(17074572-17074679)
chr8 (1-108)||(17573591-17573698)
chr8 (37-99)||(26740136-26740198)
chr8 (5-45)||(15623664-15623704)
chr8 (5-45)||(15647452-15647492)
chr8 (57-105)||(39615446-39615494)
chr8 (8-108)||(43553189-43553289)
[»] chr2 (36 HSPs)
chr2 (1-116)||(14308536-14308651)
chr2 (1-115)||(15893566-15893680)
chr2 (1-122)||(34399345-34399466)
chr2 (1-117)||(26342723-26342839)
chr2 (1-116)||(10812342-10812457)
chr2 (1-115)||(14288574-14288686)
chr2 (1-116)||(36375716-36375831)
chr2 (1-115)||(3363727-3363841)
chr2 (1-99)||(14295759-14295857)
chr2 (1-115)||(15182987-15183101)
chr2 (1-117)||(41885768-41885884)
chr2 (1-108)||(30264595-30264702)
chr2 (8-99)||(11560049-11560140)
chr2 (1-116)||(19594493-19594608)
chr2 (1-99)||(478975-479073)
chr2 (5-99)||(37093596-37093690)
chr2 (1-115)||(44360576-44360690)
chr2 (1-99)||(38186054-38186152)
chr2 (6-115)||(1259615-1259724)
chr2 (8-108)||(3376270-3376370)
chr2 (1-117)||(34357321-34357437)
chr2 (1-88)||(25558199-25558286)
chr2 (5-99)||(28145573-28145668)
chr2 (1-108)||(10263900-10264006)
chr2 (17-99)||(14284243-14284324)
chr2 (1-99)||(36404843-36404941)
chr2 (1-116)||(11222301-11222416)
chr2 (1-68)||(15677325-15677391)
chr2 (21-115)||(38072218-38072312)
chr2 (8-116)||(34262807-34262915)
chr2 (1-120)||(4883746-4883865)
chr2 (2-113)||(13965751-13965862)
chr2 (1-116)||(35158336-35158451)
chr2 (37-118)||(31011701-31011782)
chr2 (1-115)||(4654862-4654976)
chr2 (8-115)||(13754105-13754212)
[»] chr6 (31 HSPs)
chr6 (1-117)||(23923695-23923811)
chr6 (1-115)||(17836036-17836150)
chr6 (6-116)||(364525-364635)
chr6 (5-115)||(24663526-24663636)
chr6 (1-99)||(1252309-1252407)
chr6 (1-115)||(3850463-3850577)
chr6 (5-121)||(3621737-3621853)
chr6 (1-117)||(32359422-32359538)
chr6 (1-99)||(1751431-1751529)
chr6 (1-99)||(17123985-17124083)
chr6 (1-115)||(22050191-22050305)
chr6 (6-115)||(12732323-12732432)
chr6 (1-120)||(17193301-17193420)
chr6 (1-99)||(373866-373964)
chr6 (2-99)||(26470723-26470820)
chr6 (1-112)||(8992691-8992803)
chr6 (1-112)||(9017138-9017250)
chr6 (24-115)||(30388932-30389023)
chr6 (1-115)||(30416059-30416173)
chr6 (1-99)||(7632037-7632135)
chr6 (1-99)||(8176576-8176674)
chr6 (37-117)||(24356036-24356116)
chr6 (1-117)||(31244731-31244847)
chr6 (37-113)||(53810-53886)
chr6 (1-127)||(26485657-26485783)
chr6 (1-99)||(23777439-23777537)
chr6 (1-115)||(34730703-34730816)
chr6 (4-115)||(24949253-24949364)
chr6 (2-99)||(7056140-7056237)
chr6 (8-109)||(22784658-22784759)
chr6 (8-116)||(1249689-1249797)
[»] chr4 (62 HSPs)
chr4 (1-115)||(44069177-44069291)
chr4 (1-115)||(8735535-8735649)
chr4 (2-115)||(44217853-44217966)
chr4 (1-99)||(21044747-21044845)
chr4 (1-115)||(35232282-35232396)
chr4 (1-118)||(38617290-38617405)
chr4 (1-115)||(44013897-44014011)
chr4 (1-118)||(13629174-13629291)
chr4 (1-118)||(29295500-29295617)
chr4 (1-118)||(50623559-50623675)
chr4 (1-113)||(5374336-5374448)
chr4 (1-117)||(16464764-16464880)
chr4 (1-112)||(48782345-48782456)
chr4 (1-120)||(53599765-53599884)
chr4 (1-116)||(56576087-56576202)
chr4 (1-99)||(3436067-3436165)
chr4 (1-95)||(16664387-16664481)
chr4 (1-99)||(22678309-22678407)
chr4 (1-115)||(33755015-33755129)
chr4 (1-99)||(36408869-36408967)
chr4 (1-99)||(36423035-36423133)
chr4 (1-115)||(39671471-39671585)
chr4 (1-117)||(22828383-22828499)
chr4 (9-115)||(39683698-39683804)
chr4 (1-95)||(46872067-46872161)
chr4 (1-108)||(26620342-26620449)
chr4 (5-108)||(35231840-35231943)
chr4 (1-99)||(19527220-19527318)
chr4 (1-115)||(31984136-31984250)
chr4 (1-116)||(42513008-42513124)
chr4 (1-116)||(26906372-26906487)
chr4 (1-108)||(34464423-34464530)
chr4 (5-118)||(12252242-12252355)
chr4 (1-118)||(54231685-54231802)
chr4 (5-121)||(52061708-52061824)
chr4 (1-108)||(23237776-23237883)
chr4 (1-99)||(42099854-42099952)
chr4 (38-115)||(9834463-9834540)
chr4 (1-97)||(53125240-53125336)
chr4 (1-108)||(19093144-19093251)
chr4 (1-108)||(47884978-47885085)
chr4 (1-79)||(8741644-8741722)
chr4 (2-99)||(6195171-6195268)
chr4 (1-115)||(354112-354226)
chr4 (11-65)||(32239552-32239606)
chr4 (1-99)||(37502168-37502266)
chr4 (1-60)||(33084624-33084683)
chr4 (1-116)||(44549789-44549903)
chr4 (1-116)||(47251559-47251674)
chr4 (1-68)||(55147092-55147159)
chr4 (1-108)||(55703066-55703173)
chr4 (1-99)||(38542276-38542374)
chr4 (1-99)||(42645407-42645505)
chr4 (5-118)||(36659408-36659521)
chr4 (37-118)||(42629499-42629580)
chr4 (1-85)||(31862000-31862084)
chr4 (1-64)||(40412089-40412152)
chr4 (73-120)||(47428737-47428784)
chr4 (36-99)||(52677166-52677229)
chr4 (1-46)||(23621905-23621950)
chr4 (54-115)||(49089105-49089166)
chr4 (1-60)||(47093958-47094017)
[»] chr3 (53 HSPs)
chr3 (1-117)||(53745269-53745385)
chr3 (1-108)||(790693-790800)
chr3 (8-118)||(47069843-47069953)
chr3 (1-116)||(43554532-43554647)
chr3 (1-115)||(29803791-29803905)
chr3 (1-115)||(34266429-34266543)
chr3 (1-107)||(6902421-6902527)
chr3 (1-99)||(27992383-27992481)
chr3 (1-99)||(54898091-54898189)
chr3 (1-109)||(46973566-46973674)
chr3 (1-116)||(19550389-19550504)
chr3 (1-115)||(45101347-45101461)
chr3 (1-115)||(54106406-54106520)
chr3 (3-108)||(29698136-29698241)
chr3 (1-112)||(24981433-24981544)
chr3 (1-116)||(43945522-43945637)
chr3 (5-99)||(29651815-29651909)
chr3 (1-99)||(42671895-42671993)
chr3 (1-99)||(52663585-52663683)
chr3 (1-117)||(51219080-51219199)
chr3 (1-96)||(51697571-51697667)
chr3 (1-120)||(13158423-13158542)
chr3 (1-116)||(32980783-32980898)
chr3 (1-99)||(27483793-27483891)
chr3 (2-118)||(35315276-35315392)
chr3 (1-108)||(51244767-51244874)
chr3 (1-78)||(40139860-40139937)
chr3 (1-115)||(43775379-43775493)
chr3 (2-99)||(39866854-39866951)
chr3 (19-99)||(41168916-41168999)
chr3 (46-114)||(13168193-13168261)
chr3 (1-115)||(36234510-36234621)
chr3 (1-64)||(54911341-54911404)
chr3 (1-115)||(33491128-33491242)
chr3 (1-99)||(45145271-45145369)
chr3 (41-115)||(45513307-45513381)
chr3 (5-108)||(52627234-52627337)
chr3 (1-117)||(41351181-41351297)
chr3 (38-117)||(7329004-7329083)
chr3 (1-115)||(49123666-49123779)
chr3 (50-113)||(52175911-52175974)
chr3 (1-90)||(3376318-3376407)
chr3 (1-99)||(41926821-41926921)
chr3 (5-99)||(25983668-25983761)
chr3 (1-99)||(28885821-28885918)
chr3 (1-99)||(29458208-29458306)
chr3 (1-99)||(33074283-33074381)
chr3 (37-115)||(41425808-41425886)
chr3 (37-99)||(51065062-51065124)
chr3 (37-118)||(20848710-20848791)
chr3 (1-46)||(45513673-45513718)
chr3 (1-61)||(17102897-17102957)
chr3 (8-120)||(48214205-48214317)
[»] chr1 (55 HSPs)
chr1 (1-117)||(35531273-35531389)
chr1 (1-115)||(43500649-43500763)
chr1 (1-118)||(30686554-30686671)
chr1 (1-116)||(8464236-8464351)
chr1 (1-115)||(13566822-13566936)
chr1 (1-115)||(38648600-38648714)
chr1 (1-117)||(29830896-29831012)
chr1 (1-115)||(1024699-1024813)
chr1 (1-115)||(12231051-12231165)
chr1 (1-99)||(19349375-19349473)
chr1 (1-115)||(21927678-21927790)
chr1 (5-104)||(45226568-45226667)
chr1 (1-99)||(1429427-1429525)
chr1 (1-99)||(1677341-1677439)
chr1 (1-99)||(7783093-7783191)
chr1 (1-99)||(20605620-20605718)
chr1 (1-99)||(45368231-45368329)
chr1 (1-110)||(49908164-49908276)
chr1 (5-115)||(13507917-13508027)
chr1 (5-115)||(13515105-13515215)
chr1 (1-99)||(37437049-37437147)
chr1 (1-108)||(49497295-49497402)
chr1 (1-99)||(35483777-35483875)
chr1 (1-104)||(28679164-28679267)
chr1 (1-115)||(50825553-50825666)
chr1 (1-108)||(37609291-37609395)
chr1 (8-86)||(52749165-52749243)
chr1 (8-117)||(12124794-12124903)
chr1 (1-108)||(19929453-19929560)
chr1 (1-116)||(40926732-40926847)
chr1 (1-108)||(44182902-44183008)
chr1 (1-99)||(2059808-2059906)
chr1 (1-99)||(31588736-31588834)
chr1 (1-99)||(39412507-39412605)
chr1 (1-116)||(18033805-18033920)
chr1 (1-85)||(32994479-32994563)
chr1 (2-99)||(35255630-35255727)
chr1 (1-117)||(13699317-13699433)
chr1 (37-117)||(33720696-33720776)
chr1 (1-112)||(9127812-9127923)
chr1 (37-115)||(32168292-32168370)
chr1 (37-115)||(51613590-51613668)
chr1 (1-97)||(43952931-43953017)
chr1 (6-99)||(51972277-51972370)
chr1 (8-115)||(35700355-35700462)
chr1 (1-108)||(51974158-51974265)
chr1 (37-115)||(37735119-37735197)
chr1 (42-108)||(48174660-48174726)
chr1 (61-119)||(48264752-48264810)
chr1 (1-49)||(44818597-44818645)
chr1 (37-108)||(5598224-5598295)
chr1 (1-116)||(10676045-10676160)
chr1 (1-108)||(31487766-31487873)
chr1 (37-115)||(4100889-4100967)
chr1 (1-107)||(48508276-48508382)
[»] chr5 (55 HSPs)
chr5 (1-116)||(39073169-39073284)
chr5 (1-115)||(18020748-18020862)
chr5 (1-115)||(8825182-8825296)
chr5 (1-99)||(12869895-12869993)
chr5 (1-108)||(10359222-10359329)
chr5 (1-116)||(26854074-26854189)
chr5 (5-115)||(38910402-38910512)
chr5 (6-115)||(2673958-2674067)
chr5 (1-118)||(18794908-18795025)
chr5 (1-115)||(6754159-6754273)
chr5 (1-118)||(7579644-7579762)
chr5 (1-99)||(38702266-38702364)
chr5 (1-118)||(22582597-22582713)
chr5 (1-116)||(4175459-4175574)
chr5 (1-116)||(34261437-34261552)
chr5 (9-115)||(1087913-1088019)
chr5 (1-115)||(6072577-6072691)
chr5 (1-99)||(38017273-38017371)
chr5 (6-99)||(42911680-42911773)
chr5 (1-108)||(4098456-4098563)
chr5 (1-108)||(7403977-7404084)
chr5 (8-99)||(18465829-18465920)
chr5 (5-116)||(38363318-38363429)
chr5 (1-99)||(9076196-9076294)
chr5 (1-115)||(25344085-25344199)
chr5 (1-114)||(28024240-28024353)
chr5 (1-108)||(12664983-12665090)
chr5 (1-115)||(4985155-4985269)
chr5 (1-99)||(24074834-24074932)
chr5 (1-99)||(40198913-40199011)
chr5 (1-118)||(28446962-28447079)
chr5 (1-99)||(1297733-1297832)
chr5 (3-90)||(31546004-31546091)
chr5 (3-120)||(4427380-4427498)
chr5 (1-99)||(14793786-14793884)
chr5 (1-99)||(36239583-36239681)
chr5 (1-99)||(2133904-2134000)
chr5 (2-68)||(4694890-4694956)
chr5 (1-117)||(4017539-4017655)
chr5 (1-117)||(16124238-16124354)
chr5 (3-115)||(38502784-38502896)
chr5 (1-108)||(5119303-5119410)
chr5 (1-120)||(18437298-18437417)
chr5 (41-115)||(10889168-10889242)
chr5 (1-118)||(28463362-28463479)
chr5 (1-64)||(8229834-8229897)
chr5 (1-116)||(9127330-9127445)
chr5 (8-115)||(25027555-25027662)
chr5 (37-115)||(5842973-5843051)
chr5 (6-99)||(37809889-37809982)
chr5 (1-117)||(3686815-3686931)
chr5 (37-115)||(6008045-6008124)
chr5 (1-112)||(6689724-6689835)
chr5 (37-99)||(12784439-12784501)
chr5 (37-99)||(37633837-37633899)
[»] chr7 (39 HSPs)
chr7 (1-108)||(29497527-29497634)
chr7 (1-116)||(33099820-33099935)
chr7 (1-115)||(8381969-8382083)
chr7 (1-96)||(7312760-7312855)
chr7 (1-99)||(31430702-31430800)
chr7 (1-99)||(41891413-41891511)
chr7 (1-99)||(18470450-18470548)
chr7 (1-99)||(32528330-32528428)
chr7 (1-117)||(32966033-32966149)
chr7 (1-99)||(8265092-8265190)
chr7 (1-99)||(12838080-12838178)
chr7 (1-87)||(44480156-44480242)
chr7 (5-96)||(29722310-29722401)
chr7 (1-108)||(31398925-31399032)
chr7 (1-65)||(20035191-20035255)
chr7 (1-65)||(20045602-20045666)
chr7 (1-108)||(26724067-26724175)
chr7 (1-108)||(36922382-36922490)
chr7 (1-116)||(38168773-38168889)
chr7 (1-116)||(5732058-5732173)
chr7 (1-116)||(10227399-10227514)
chr7 (37-116)||(17896476-17896555)
chr7 (5-99)||(22950820-22950914)
chr7 (5-99)||(36298176-36298270)
chr7 (1-99)||(41675189-41675286)
chr7 (1-117)||(47408256-47408372)
chr7 (1-108)||(7477191-7477298)
chr7 (1-99)||(3838005-3838103)
chr7 (37-115)||(42841852-42841930)
chr7 (1-66)||(26632215-26632280)
chr7 (1-55)||(17896569-17896623)
chr7 (1-117)||(33921758-33921874)
chr7 (1-120)||(28608737-28608856)
chr7 (37-115)||(18194200-18194278)
chr7 (2-78)||(36648028-36648104)
chr7 (1-115)||(33173950-33174064)
chr7 (1-83)||(37353888-37353970)
chr7 (27-85)||(42881118-42881176)
chr7 (37-99)||(44820609-44820671)
[»] scaffold0024 (2 HSPs)
scaffold0024 (1-118)||(49289-49406)
scaffold0024 (48-117)||(89360-89429)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-117)||(8297-8413)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-116)||(69243-69357)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-99)||(26127-26225)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-115)||(77231-77345)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-120)||(148446-148565)
scaffold0002 (46-114)||(138727-138795)
[»] scaffold0886 (1 HSPs)
scaffold0886 (1-114)||(4658-4770)
[»] scaffold0014 (1 HSPs)
scaffold0014 (9-99)||(195587-195677)
[»] scaffold0831 (1 HSPs)
scaffold0831 (1-85)||(2950-3035)
[»] scaffold0016 (1 HSPs)
scaffold0016 (55-112)||(91867-91924)
[»] scaffold1213 (1 HSPs)
scaffold1213 (1-65)||(1-65)
[»] scaffold0274 (1 HSPs)
scaffold0274 (1-115)||(224-337)
[»] scaffold0001 (1 HSPs)
scaffold0001 (8-115)||(419476-419583)


Alignment Details
Target: chr8 (Bit Score: 102; Significance: 8e-51; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 114 - 215
Target Start/End: Original strand, 24178310 - 24178411
Alignment:
Q  114 tattaatgagaagaaaagatagaataaaagcaaaactagaattcatgtgtttgtttacatttgcagggttatgagatggcccagttgggtctataatgtc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24178310 tattaatgagaagaaaagatagaataaaagcaaaactagaattcatgtgtttgtttacatttgcagggttatgagatggcccagttgggtctataatgtc 24178409  T
Q  214 ct 215  Q
    ||    
T  24178410 ct 24178411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38482889 - 38482774
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||     
T  38482889 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaa 38482790  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  38482789 ggaacggaggtagtat 38482774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38128644 - 38128529
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||| | ||||||||     
T  38128644 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtataaaatgtcaaaatgtaacaattaaaaa 38128545  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  38128544 ggaacggaggtagtat 38128529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 11994024 - 11994138
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| || || |||||| ||||||||||| ||||||||     
T  11994024 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgtttattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaa 11994123  T
Q  101 gaaacggatgtagta 115  Q
    | |||||||||||||    
T  11994124 ggaacggatgtagta 11994138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 14228419 - 14228321
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||    
T  14228419 taaggtcattatagtaaaagtatagcttatgacatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 14228321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 34981972 - 34982086
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| |||||| || |||||||||||||||||| ||||||||     
T  34981972 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtattaattgttgattgttttggtttgtgtaaaatatcaaaatgtgacaattaaaaa 34982071  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  34982072 ggaacggaggtagta 34982086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 35052196 - 35052310
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||     
T  35052196 taaggtcattatagtaaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 35052295  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  35052296 ggaacggaggtagta 35052310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 39303613 - 39303495
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtga-taattaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| || || |||||| |||||||||||  ||||||||    
T  39303613 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaaattaaaa 39303514  T
Q  100 tgaaacggatgtagtatta 118  Q
     | |||||| |||||||||    
T  39303513 aggaacggaggtagtatta 39303495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 16656843 - 16656955
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||| |||||||||||||||||||| ||||| ||| |||| |||||||||||||||| |||||||||| || |||||| ||||||||||| ||||||||     
T  16656843 taagttcattatagtaaaagtatagtttattgcatcaaaattagtatcaattgttgagtgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 16656942  T
Q  101 gaaacggatgtag 113  Q
    |||||||||||||    
T  16656943 gaaacggatgtag 16656955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 25703675 - 25703560
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||||| ||||||||||| ||||| || || |||||| ||||||||||| ||||||||     
T  25703675 taagatcattatagtaaaagtatagcttattgcataaaaagtagtattaattgttgattatcttgttttgtgtaaaatgtcaaaatgtgacaattaaaaa 25703576  T
Q  101 gaaacggatgtagtat 116  Q
    |||||||| |||||||    
T  25703575 gaaacggaggtagtat 25703560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 25812846 - 25812731
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||||| ||||||||||| ||||| || || |||||| ||||||||||| ||||||||     
T  25812846 taagttcattatagtaaaagtatagcttattgcataaaaagtagtattaattgttgattatcttgttttgtgtaaaatgtcaaaatgtgacaattaaaaa 25812747  T
Q  101 gaaacggatgtagtat 116  Q
    |||||||| |||||||    
T  25812746 gaaacggaggtagtat 25812731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14263687 - 14263785
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||| || |||||| ||||||||||| ||||||||    
T  14263687 taaggtcattatagtaaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 14263785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 33935157 - 33935059
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||||||||||||| || |||||| ||||||||||| ||||||||    
T  33935157 taaggtcattatagtaaaattatagcttattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 33935059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4057431 - 4057529
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||| |||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||| || |||||| ||||||||||| ||||||||    
T  4057431 taagatcattatagtaaaagtatagcttatggcataaaaagtagtatcaattgttaattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 4057529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 23430052 - 23430150
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| || || |||||| | |||||||||  |||||||    
T  23430052 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgttaaaatgtgacgattaaaa 23430150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 26062850 - 26062948
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| ||||| || || |||||| ||||||||||| ||||||||    
T  26062850 taaggtcattatagtaaaaatatagcttattgcatcaaaagtagtatcaattgttgattatcttgatttgtgtaaaatgtcaaaatgtgacaattaaaa 26062948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 40228438 - 40228536
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||||||||||| || |||||  ||||||||||| ||||||||    
T  40228438 taaggtcattatagtaaaagtacagcttattgcatcaaaaatagtatcaattgttgattgtcttggtttgtgtaaaacgtcaaaatgtgacaattaaaa 40228536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1202541 - 1202438
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| |||| |||||||||||||||||||||||| || || |||||| | ||||||||| ||||||||     
T  1202541 taaggtcattatagtaaaagtataacttattgcatcaaaaatagtatcaattgttgattgtcttgatttgtgtaaaatgttaaaatgtgacaattaaaaa 1202442  T
Q  101 gaaa 104  Q
    ||||    
T  1202441 gaaa 1202438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 45281475 - 45281368
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||||||||| ||||| ||| ||||||||||||||||||||||| |||||||| || |||||| | ||||||||| ||||||||     
T  45281475 taaggtgattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgttaaaatgtgacaattaaaag 45281376  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  45281375 ggaacgga 45281368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 34046994 - 34047092
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||| ||||| ||| |||| |||||||||||||||||  |||||||| || |||||| ||||||||||| ||||||||    
T  34046994 taaggtcattatagtaaaagtatagtttattgcatcaaaaatagtatcaattgttgatattcttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 34047092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 15596487 - 15596603
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| ||||||||||||||||| |||||| ||| ||||||| || ||||| |||||| |||||||| || |||||| ||||||||||| ||||||||     
T  15596487 taaggttattatagtaaaagtataacttattgcataaaaagtaataacaattattgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 15596586  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  15596587 ggaacggaggtagtatt 15596603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 13328121 - 13328220
Alignment:
Q  9 ttatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgga 108  Q
    |||||||||||||||| ||||||  ||||||||||||||||||| ||||||||||| ||| || |||||| ||||||||||| |||||||| | ||||||    
T  13328121 ttatagtaaaagtataacttattgtattaaaagtagtatcaatttttgattgtcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgga 13328220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 23848653 - 23848555
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||| ||||||||||||||| || | |||| ||||||||||| ||||||||    
T  23848653 taaggtcattataataaaaatatagtttattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtcaaatgtcaaaatgtgacaattaaaa 23848555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 43642086 - 43641970
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||  ||||| ||| |||||||||| ||||| ||||||||||| ||| || |||||| |||||| |||| ||||||||     
T  43642086 taaggtcattatagtaaaagtataatttattgcatcaaaagtagtaacaattattgattgtcttagtttgtgtaaaatgtcaaaaagtgacaattaaaaa 43641987  T
Q  101 gaaacggatgtagtatt 117  Q
    | ||| |||||| ||||    
T  43641986 ggaacagatgtaatatt 43641970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 1245455 - 1245566
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| ||||||  || |||||||||| ||||| |||||||||||| ||  | |||||| |||||| |||| ||||||||     
T  1245455 taaggtcattatagtaaaagtataacttattgaatcaaaagtagtaacaattattgattgtcttgatttatgtaaaatgtcaaaaagtgacaattaaaaa 1245554  T
Q  101 gaaacggatgta 112  Q
    | ||||||||||    
T  1245555 ggaacggatgta 1245566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9954792 - 9954890
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||  | |||||| | ||||| ||| ||||||||    
T  9954792 taaggtcattatggtaaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttggtttatgtaaaatgttaaaatatgacaattaaaa 9954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 40603948 - 40603871
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaat 78  Q
    ||||||||| ||||||||||| ||| ||||||||| |||| |||||||||||||||||||||||| || |||||||||    
T  40603948 taaggtcatcatagtaaaagtttagtttattacatcaaaaatagtatcaattgttgattgtcttgatttgtataaaat 40603871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18291606 - 18291722
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| ||||  |||| | ||||| ||  | |||||| ||||||||||| ||||||||     
T  18291606 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttgatttttgtaaaatgtcaaaatgtgacaattaaaaa 18291705  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  18291706 ggaacggaggtagtatt 18291722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41308038 - 41308154
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacatt-aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||| || | |||||||||| ||||| || |||||||||||   | |||||| ||||||| ||| ||||||||    
T  41308038 taaggtcattatagtaaaagtataacttattgcaatcaaaagtagtaacaattattaattgtcttggtatatgtaaaatgtcaaaatatgacaattaaaa 41308137  T
Q  100 tgaaacggatgtagtat 116  Q
     |||||||| |||||||    
T  41308138 agaaacggaggtagtat 41308154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 8453329 - 8453219
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaa 104  Q
    ||||||||| ||||||||||  ||||| ||| |||||||||| ||||| |||||| |||| ||| || |||||| ||||||||||| |||||||| | ||    
T  8453329 gtcattataataaaagtataatttattgcatcaaaagtagtaacaattattgattatcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 8453230  T
Q  105 cggatgtagta 115  Q
    |||| ||||||    
T  8453229 cggaggtagta 8453219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 10180513 - 10180627
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||| | |||||| ||| |||||||||| ||||  |||| | ||||| ||  | |||||| ||||||| ||| ||||||||     
T  10180513 taaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttgatttatgtaaaatgtcaaaatatgacaattaaaaa 10180612  T
Q  101 gaaacggatgtagta 115  Q
    |||||||||||||||    
T  10180613 gaaacggatgtagta 10180627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 32010180 - 32010083
Alignment:
Q  2 aaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||  ||||| ||| |||||||||| ||||| ||||||||||||||| ||  ||||| | |||| |||| ||||||||    
T  32010180 aaggtcattatagtaaaagtataaattattgcatcaaaagtagtagcaattattgattgtcttggtttgtgaaaaatgttaaaaagtgacaattaaaa 32010083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12342711 - 12342613
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||| | |||||| ||| |||||||||| ||||  |||| | ||||||||  | |||||| ||||||| ||| ||||||||    
T  12342711 taaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaaatatgacaattaaaa 12342613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 14061239 - 14061130
Alignment:
Q  8 attatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgg 107  Q
    |||||||||||||||||  |||||  || ||||||||||  | || ||||||||||||||| || |||||| | |||| |||| |||||||| | |||||    
T  14061239 attatagtaaaagtataaattattgtatcaaaagtagtaatatttattgattgtcttggtttgtgtaaaatgttaaaaagtgacaattaaaaaggaacgg 14061140  T
Q  108 atgtagtatt 117  Q
    | ||||||||    
T  14061139 aggtagtatt 14061130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9808071 - 9808008
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtctt 64  Q
    ||||||||||||| |||||||||| |||||| ||| ||||||||||| ||||||| ||| ||||    
T  9808071 taaggtcattataataaaagtataacttattgcatcaaaagtagtattaattgttaattatctt 9808008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21651843 - 21651736
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||| |  ||||| ||| |||||||||| | ||  |||  | ||||||||  | |||||| ||||||||||| ||||||||     
T  21651843 taaggtcattatagtaaaagtacaagttattgcatcaaaagtagtaacgatcattggctatcttggtttatgtaaaatgtcaaaatgtgacaattaaaaa 21651744  T
Q  101 gaaacgga 108  Q
    ||||||||    
T  21651743 gaaacgga 21651736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 2456212 - 2456098
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||| | |||||| ||| |||||||||| ||||  |||| | | ||| ||  | |||||| |||||||||||  |||||||     
T  2456212 taaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatattgatttatgtaaaatgtcaaaatgtgacgattaaaaa 2456113  T
Q  101 gaaacggatgtagta 115  Q
    ||| |||| ||||||    
T  2456112 gaatcggaggtagta 2456098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3513500 - 3513558
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgatt 59  Q
    |||||||||||||||||| ||||||||||||  || ||||||| |||||||| ||||||    
T  3513500 taaggtcattatagtaaatgtatagcttattgtatcaaaagtaatatcaatttttgatt 3513558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12248867 - 12248753
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||||||||  |||||  || ||||||||||  | || |||| ||||||||||||| |||||| ||||||  ||  ||||||||     
T  12248867 taaggttattatagtaaaagtatatattattgtatcaaaagtagtaatatttattgaatgtcttggttcgtgtaaaatgtcaaaaactgtcaattaaaaa 12248768  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  12248767 ggaacggaggtagta 12248753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 18842672 - 18842786
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||| || |  |||||  || |||||||||| || || |||||| ||||| || || |||||| ||||||||||| ||||||||     
T  18842672 taaggttattatagtaaaaataaaaattattgtatcaaaagtagtaacatttattgattatcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaa 18842771  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  18842772 ggaacggaggtagta 18842786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7605996 - 7605919
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaat 78  Q
    |||| ||||||||||||||||||| |||||| ||||||||||| ||   ||| |||||||||||| || || ||||||    
T  7605996 taagatcattatagtaaaagtataacttattgcattaaaagtaataatgattattgattgtcttgatttgtgtaaaat 7605919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 2888529 - 2888449
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagtatt 117  Q
    |||||||| | || || ||||||||||||||| || |||||| | ||||||||| |||||||| | |||||| ||||||||    
T  2888529 aaaagtagcaacatttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagtatt 2888449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 17313285 - 17313401
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||| | |||||| ||| ||||||| || ||||  |||| | |||| |||  | ||| || ||||||||| | ||||||||     
T  17313285 taaggtcattatagtaaaagtagaacttattgcatcaaaagtaataacaataattgactatcttcgtttatgtaagatgtcaaaatgtaacaattaaaag 17313384  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  17313385 ggaacggaggtagtatt 17313401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 11707539 - 11707444
Alignment:
Q  13 agtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgga 108  Q
    |||||||||||| |||| ||||| ||||||||||  |||| |||||||||||  ||  | |||||| | ||||| ||| |||||||| ||||||||    
T  11707539 agtaaaagtataacttaatacatcaaaagtagtaataattattgattgtcttaatttatgtaaaatgtaaaaatatgacaattaaaaagaaacgga 11707444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 17074679 - 17074572
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||| || |  ||||| ||| |||||||| |  | || ||||||||||||||| || |||||| | ||||||||| ||||||||     
T  17074679 taaggttattatagtaaaaataaaaattattgcatcaaaagtagcaatatttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaa 17074580  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  17074579 ggaacgga 17074572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 17573591 - 17573698
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||| || |  ||||| ||| |||||||| |  | || ||||||||||||||| || |||||| | ||||||||| ||||||||     
T  17573591 taaggttattatagtaaaaataaaaattattgcatcaaaagtagcaatatttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaa 17573690  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  17573691 ggaacgga 17573698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 26740198 - 26740136
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||| || || ||||||||||||||| || |||||| |||||| |||| ||||||||    
T  26740198 aaaagtagtaacacttattgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaa 26740136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 15623704 - 15623664
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagt 45  Q
    |||||||||||||||||||| |||||||||| |||| ||||    
T  15623704 gtcattatagtaaaagtataacttattacatcaaaaatagt 15623664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 15647492 - 15647452
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagt 45  Q
    |||||||||||||||||||| |||||||||| |||| ||||    
T  15647492 gtcattatagtaaaagtataacttattacatcaaaaatagt 15647452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 39615494 - 39615446
Alignment:
Q  57 attgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaac 105  Q
    ||||||||||||  | |||||||||||||||||| |||||||| |||||    
T  39615494 attgtcttggtttatgtaaaatatcaaaatgtgacaattaaaaagaaac 39615446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 43553189 - 43553289
Alignment:
Q  8 attatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgg 107  Q
    ||||||||||||||||   |||||  || |||||||||| || || ||||||||||||||| |  |||||| ||| || | || |||||||| |||||||    
T  43553189 attatagtaaaagtatcaattattgtatcaaaagtagtaacatttattgattgtcttggtttgcgtaaaatgtcacaaagcgacaattaaaaagaaacgg 43553288  T
Q  108 a 108  Q
    |    
T  43553289 a 43553289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14308536 - 14308651
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||     
T  14308536 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 14308635  T
Q  101 gaaacggatgtagtat 116  Q
    ||||||||||||||||    
T  14308636 gaaacggatgtagtat 14308651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 15893680 - 15893566
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||     
T  15893680 taaggttattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaa 15893581  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  15893580 ggaacggaggtagta 15893566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 34399345 - 34399466
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||| || |||| | ||||||||||||||||||||     
T  34399345 taaggtcattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaagtgtcaaaatgtgataattaaaaa 34399444  T
Q  101 gaaacggatgtagtattaatga 122  Q
    | |||||| |||||| ||||||    
T  34399445 ggaacggaggtagtaataatga 34399466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 26342723 - 26342839
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || |||||| |||||| |||| ||||||||     
T  26342723 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaacgtgacaattaaaaa 26342822  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  26342823 ggaacggaggtagtatt 26342839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10812342 - 10812457
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||     
T  10812342 taaggtcattatagtaaaagtatagcttatggcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 10812441  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  10812442 ggaacggaggtagtat 10812457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 14288574 - 14288686
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||  || ||||||||||||||||||||| ||||||||     
T  14288574 taaggtcattatagtaaaagtatagcttattgcataaaaagtagtatcaattattgattgtctt--tttgtataaaatatcaaaatgtgacaattaaaaa 14288671  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  14288672 ggaacggaagtagta 14288686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 36375716 - 36375831
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||     
T  36375716 taaggtcattatagtaaaattatagcttattgcatcaaaggtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 36375815  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  36375816 ggaacggaggtagtat 36375831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3363727 - 3363841
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||| || |||||| |||||||| || ||||||||     
T  3363727 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtaaaatgtcaaaatgcgacaattaaaaa 3363826  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  3363827 ggaacggaggtagta 3363841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 14295857 - 14295759
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||    
T  14295857 taaggtcattatagtaaaagtataccttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 14295759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 15183101 - 15182987
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||||| || |||||| ||||||||||| ||||||||     
T  15183101 taaggtcattatagtaaaaatatagcttattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 15183002  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  15183001 ggaacggaggtagta 15182987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41885768 - 41885884
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||| |||||||||| |||||||| ||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||| ||| ||||     
T  41885768 taaggtcattacagtaaaagtacagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaatgaaaaa 41885867  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  41885868 ggaacggaggtagtatt 41885884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 30264702 - 30264595
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||  | |||||| ||||||||||| ||||||||     
T  30264702 taaggtcattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaa 30264603  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  30264602 ggaacgga 30264595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 11560140 - 11560049
Alignment:
Q  8 attatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||  | |||||| ||||||||||||||||||||    
T  11560140 attatagtaaaagtacagcttattacatcaaaagtaatatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgataattaaaa 11560049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 19594493 - 19594608
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||| |||| ||| || |||||| ||||||||||| ||||||||     
T  19594493 taaggtcattatagtaaaaatatagcttattgcatcaaaagtaatatcaattgttgattatctttgtttgtgtaaaatgtcaaaatgtgacaattaaaaa 19594592  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  19594593 gtaacggaggtagtat 19594608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 479073 - 478975
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||| |||||||| || |||||| | ||||||||| ||||||||    
T  479073 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattattgattatcttggtttgtgtaaaatgttaaaatgtgacaattaaaa 478975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 37093596 - 37093690
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||| || |||||| ||||||||||| ||||||||    
T  37093596 gtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttaattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 37093690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 44360576 - 44360690
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||| |||||||||| |||||| ||| |||||||||| ||||| ||||||||||||||| || |||||| ||||||||||| ||||||||     
T  44360576 taaggtcattataataaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 44360675  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  44360676 ggaacggaggtagta 44360690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38186152 - 38186054
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||| ||||| ||||||||| |||| || |||||||||||||||||||| ||| || |||||||||||||||||| ||| ||||    
T  38186152 taaggtcattatagtaaaaatatagtttattacatcaaaaataatatcaattgttgattgtcttagtttgtgtaaaatatcaaaatgtgacaataaaaa 38186054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 1259724 - 1259615
Alignment:
Q  6 tcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaac 105  Q
    ||||||| |||||| ||||| ||||| | | ||||||||||||||||||||||| |||||||| || |||||||||||||||| | |||||||| |||||    
T  1259724 tcattatggtaaaattatagtttattgcgtcaaaagtagtatcaattgttgattctcttggtttgtgtaaaatatcaaaatgtaacaattaaaaagaaac 1259625  T
Q  106 ggatgtagta 115  Q
    ||| ||||||    
T  1259624 ggaggtagta 1259615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 3376370 - 3376270
Alignment:
Q  8 attatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgg 107  Q
    |||||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||| || || |||||| ||||||||||| |||||||| | |||||    
T  3376370 attataataaaaatatagcttattatattaaaagtagtatcaattattgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgg 3376271  T
Q  108 a 108  Q
    |    
T  3376270 a 3376270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 34357321 - 34357437
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||| |||| |||||| ||| |||| |||||| ||||||||||| |||||||| || |||||| || |||||||| ||||||||     
T  34357321 taaggtcattatagtaaaaatataacttattgcatcaaaaatagtataaattgttgattatcttggtttgtgtaaaatgtcgaaatgtgacaattaaaaa 34357420  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  34357421 ggaacggaggtagtatt 34357437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25558286 - 25558199
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgt 88  Q
    ||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||||||||| || |||||| |||||||||    
T  25558286 taaggtcattatagtaaaagtctagcttattgtatcaaaagtagtatcaatttttgattgtcttggtttgtgtaaaatgtcaaaatgt 25558199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 28145668 - 28145573
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtat--aaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| ||  |||  ||||||||||||||||| ||||||||    
T  28145668 gtcattatagtaaa-gtatagcttattgcatcaaaagtagtatcaattgttgattgtcttgatttatataaaaaatatcaaaatgtgacaattaaaa 28145573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 10263900 - 10264006
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||||||||| ||| ||||||||||| || |||||| ||||||| ||| |||| |||     
T  10263900 taaggtcattatagtaaaagtatagtttattgcatcaaaagtagtatcaatt-ttggttgtcttggtttgtgtaaaatgtcaaaatatgacaatttaaaa 10263998  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  10263999 ggaacgga 10264006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 14284243 - 14284324
Alignment:
Q  17 aaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||||||||||| || | |||| ||||||||||| ||||||||    
T  14284243 aaagtatagcttattgcatcaaaattagtatcaattgttgattgtcttggtttgtgt-aaatgtcaaaatgtgacaattaaaa 14284324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36404941 - 36404843
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||| |||||||||||| |||| |||||| ||| |||||||||| ||||  |||| | ||||||||| | |||||||||||||||||| ||||||||    
T  36404941 taaggttattatagtaaaaatataacttattgcatcaaaagtagtaacaatcattgactatcttggttcatgtaaaatatcaaaatgtgacaattaaaa 36404843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 11222416 - 11222301
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||| |||||||| | |||||| ||| |||||||||| ||||  |||| | ||||||||  | |||||| ||||||||||| ||||||||     
T  11222416 taaggtcattatattaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaaatgtgacaattaaaaa 11222317  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  11222316 ggaacggaggtagtat 11222301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15677391 - 15677325
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggtt 68  Q
    ||||||||||||| |||||||||| |||||| ||| |||||||||||||| |||||||||||||||||    
T  15677391 taaggtcattataataaaagtataacttattgcatcaaaagtagtatcaa-tgttgattgtcttggtt 15677325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 38072312 - 38072218
Alignment:
Q  21 tatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagta 115  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||| || |||||| | ||||| ||| || ||||| | |||||| ||||||    
T  38072312 tatagcttattgcatcaaaagtagtatcaattgttgattgttttggtttgtgtaaaatgttaaaatatgacaaataaaaaggaacggaggtagta 38072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 34262915 - 34262807
Alignment:
Q  8 attatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgg 107  Q
    |||||||||||| ||||  |||||| || |||||||||| ||||| |||| |||||||||| || |||||||| ||||  ||| |||||||| | |||||    
T  34262915 attatagtaaaaatatatattattatatcaaaagtagtaacaattattgaatgtcttggtttgtgtaaaatataaaaaattgacaattaaaaaggaacgg 34262816  T
Q  108 atgtagtat 116  Q
    | |||||||    
T  34262815 aggtagtat 34262807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 4883746 - 4883865
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||| | |||||||||| |||||||||| ||||  |||  | | || |||  | |||||| ||||||||||| ||||||||     
T  4883746 taaggtcattatagtaaaagtacaacttattacatcaaaagtagtaacaatcattggctatattagtttatgtaaaatgtcaaaatgtgacaattaaaaa 4883845  T
Q  101 gaaacggatgtagtattaat 120  Q
    | || |||||||||| ||||    
T  4883846 ggaatggatgtagtaataat 4883865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 13965751 - 13965862
Alignment:
Q  2 aaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatg 101  Q
    ||||||||||||||||||| ||| ||||||  || ||| |||  | ||||| ||||||||||||||| || |||||| |||||| |||| |||||||| |    
T  13965751 aaggtcattatagtaaaagcataacttattggatcaaatgtaaaaacaattattgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaag 13965850  T
Q  102 aaacggatgtag 113  Q
     |||||| ||||    
T  13965851 gaacggaggtag 13965862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 35158451 - 35158336
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||| ||||||||||||  |||||  || ||||||||||  | || |||| ||||||||||| | |||||| |||||| |||| ||||||||     
T  35158451 taaggttattacagtaaaagtatatattattgtatcaaaagtagtaatatttattgaatgtcttggttcatgtaaaatgtcaaaaagtgacaattaaaaa 35158352  T
Q  101 gaaacggatgtagtat 116  Q
    |||||||| |||||||    
T  35158351 gaaacggaggtagtat 35158336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 31011782 - 31011701
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagtatta 118  Q
    |||||||| | || || ||||||||||||||| ||||||||| ||||||||| | |||||||| | |||||| |||||||||    
T  31011782 aaaagtagcaacatttattgattgtcttggtttgtataaaatgtcaaaatgtaacaattaaaaaggaacggaggtagtatta 31011701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 4654862 - 4654976
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||  | | |||||| ||| |||||||||| ||||  |||| | | ||||||  | |||||| |||||||| || ||||||||     
T  4654862 taaggtcattatagtaaaaacacaacttattgcatcaaaagtagtaacaatcattgactattttggtttatgtaaaatgtcaaaatgagacaattaaaaa 4654961  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  4654962 ggaacggaggtagta 4654976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 13754105 - 13754212
Alignment:
Q  8 attatagtaaaagta-tagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacg 106  Q
    ||||||||||||||| ||  |||||  || |||||||||| || ||  |||||||||||||| || |||||| |||||| |||| |||||||| | ||||    
T  13754105 attatagtaaaagtagtaaattattgtatcaaaagtagtaacatttaatgattgtcttggtttgtgtaaaatgtcaaaa-gtgacaattaaaaaggaacg 13754203  T
Q  107 gatgtagta 115  Q
    || ||||||    
T  13754204 gaagtagta 13754212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 23923811 - 23923695
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||||||| ||||||||     
T  23923811 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggtttgtgcaaaatgtcaaaatgtgacaattaaaaa 23923712  T
Q  101 gaaacggatgtagtatt 117  Q
    | || ||||||||||||    
T  23923711 ggaatggatgtagtatt 23923695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 17836036 - 17836150
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||||||||| |||||| ||||||||     
T  17836036 taaggtcattatagtaaaagtatagcttattgcattaaaagtagaatcaattgttgattgtcttggtttgtgtaaaatatcaatatgtgacaattaaaaa 17836135  T
Q  101 gaaacggatgtagta 115  Q
    | |||||||||||||    
T  17836136 ggaacggatgtagta 17836150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 364635 - 364525
Alignment:
Q  6 tcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaac 105  Q
    |||||||||||||||||||||||||| ||| |||||||  ||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||||    
T  364635 tcattatagtaaaagtatagcttattgcatcaaaagtaagatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaagaaac 364536  T
Q  106 ggatgtagtat 116  Q
    ||| |||||||    
T  364535 ggaggtagtat 364525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 24663526 - 24663636
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaa 104  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||| || |||||| ||||||||||| |||||||| | ||    
T  24663526 gtcattatagtaaaagtatagcttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 24663625  T
Q  105 cggatgtagta 115  Q
    |||||||||||    
T  24663626 cggatgtagta 24663636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1252309 - 1252407
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||| |||  |||||||| ||||||||||||||||||||    
T  1252309 taaggtcattatagtaaaaatatagtttattacatcaaaagtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgataattaaaa 1252407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3850463 - 3850577
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||| |||||||| |  ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||     
T  3850463 taaggtcattatagtaaaaatatagcttgtggcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaa 3850562  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  3850563 gtaacggaggtagta 3850577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 3621737 - 3621853
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaa 104  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||| | ||    
T  3621737 gtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 3621836  T
Q  105 cggatgtagtattaatg 121  Q
    | || ||||||| ||||    
T  3621837 cagaggtagtataaatg 3621853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 32359538 - 32359422
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||| |||||||||||||||||||||||||| ||| ||||| ||| |||||| || |||||||||||| ||||||||||||||||||| | ||||||||     
T  32359538 taagatcattatagtaaaagtatagcttattgcatcaaaagaagtgtcaattattaattgtcttggtttgtataaaatatcaaaatgtaacaattaaaaa 32359439  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  32359438 ggaacggaggtagtatt 32359422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1751529 - 1751431
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||| || || |||||| ||||||||||| ||||||||    
T  1751529 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattatcttgatttgtgtaaaatgtcaaaatgtgacaattaaaa 1751431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17124083 - 17123985
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||| ||||||||||| ||| || |||||| ||||||||||| ||||||||    
T  17124083 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattattgattgtcttagtttgtgtaaaatgtcaaaatgtgacaattaaaa 17123985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 22050191 - 22050305
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||| |||||||||| |||||| ||| |||||||||| ||||| ||||||||||||||| || |||||| ||||||||||| ||||||||     
T  22050191 taaggtcattataataaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 22050290  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  22050291 ggaacggaggtagta 22050305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 115
Target Start/End: Original strand, 12732323 - 12732432
Alignment:
Q  6 tcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaac 105  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| || || |||||| | ||||||||| |||||||| | |||    
T  12732323 tcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttaattgtcttgttttgtgtaaaatgttaaaatgtgacaattaaaaaggaac 12732422  T
Q  106 ggatgtagta 115  Q
    ||| ||||||    
T  12732423 ggaagtagta 12732432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 17193301 - 17193420
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||  ||| |||||| ||| |||||||| |||||||||||||||||||||||  |||||||| |||||| |||| ||||||||     
T  17193301 taaggtcattatagtaaaataataacttattgcatcaaaagtaggatcaattgttgattgtcttggtttatataaaatgtcaaaacgtgacaattaaaaa 17193400  T
Q  101 gaaacggatgtagtattaat 120  Q
    | |||||| |||||| ||||    
T  17193401 ggaacggaggtagtaataat 17193420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 373866 - 373964
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||| |||||||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||||||||  | |||||| ||||||||||| ||||||||    
T  373866 taagatcattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgctgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaa 373964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 26470820 - 26470723
Alignment:
Q  2 aaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| ||||| |||||||||||||||  | |||||| |||||| |||| ||||||||    
T  26470820 aaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttatgtaaaatgtcaaaaagtgacaattaaaa 26470723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 8992691 - 8992803
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatc-aattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| | ||||  ||||| |||||||| || |||||||||||||||||| ||||||||    
T  8992691 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaaattactgattatcttggtttgtgtaaaatatcaaaatgtgacaattaaaa 8992790  T
Q  100 tgaaacggatgta 112  Q
     | || |||||||    
T  8992791 aggaagggatgta 8992803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 9017138 - 9017250
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatc-aattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| | ||||  ||||| |||||||| || |||||||||||||||||| ||||||||    
T  9017138 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaaattactgattatcttggtttgtgtaaaatatcaaaatgtgacaattaaaa 9017237  T
Q  100 tgaaacggatgta 112  Q
     | || |||||||    
T  9017238 aggaagggatgta 9017250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 30388932 - 30389023
Alignment:
Q  24 agcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagta 115  Q
    |||||||| ||| |||| |||||| |||||||||||||||||||| || |||||| |||||||||||||||||||| | |||||| ||||||    
T  30388932 agcttattgcatcaaaaatagtattaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagta 30389023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 30416173 - 30416059
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| ||||||||||||||||| ||||||  || |||||||||| ||||| |||||||||||||||  | |||||| |||| || ||||||||||||     
T  30416173 taaggttattatagtaaaagtataacttattgtatcaaaagtagtaacaattattgattgtcttggtttatgtaaaatgtcaacatatgataattaaaaa 30416074  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  30416073 ggaacggaggtagta 30416059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7632135 - 7632037
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||| ||| |||| |||||  |||| |||||||||||| ||  |||||||| |||||| ||||| |||||||    
T  7632135 taaggtcattatagtaaaagtataacttattgcatcaaaaatagtaataattattgattgtcttgatttatataaaatgtcaaaaagtgattattaaaa 7632037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8176576 - 8176674
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||| ||| |||||||| | ||||| |||||||||||| || || |||||| | |||| |||| ||||||||    
T  8176576 taaggtcattatagtaaaagtataacttattgcatcaaaagtagaaacaattattgattgtcttgatttgtgtaaaatgttaaaaagtgacaattaaaa 8176674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 24356116 - 24356036
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagtatt 117  Q
    |||||||||| || || |||||||| |||||| | |||||||||||||| |||| |||||||| |||||||||||||||||    
T  24356116 aaaagtagtaacatttattgattgttttggtttggataaaatatcaaaaagtgacaattaaaaagaaacggatgtagtatt 24356036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 31244847 - 31244731
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||| |    |||  || ||||||| || || || ||||||||||||||| || ||||| |||||||||||| ||||||||     
T  31244847 taaggtcattatagtaaaagtaaaaacaattgtatcaaaagtactaccatttattgattgtcttggtttgtgtaaaaaatcaaaatgtgacaattaaaaa 31244748  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||||||||||||    
T  31244747 ggaacggatgtagtatt 31244731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 53810 - 53886
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtag 113  Q
    |||||||||| ||||| ||||||||||||||   | |||||||||||||||||| |||||||| |||||||| ||||    
T  53810 aaaagtagtaacaattattgattgtcttggtatatgtaaaatatcaaaatgtgacaattaaaaagaaacggaggtag 53886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 26485783 - 26485657
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||||||||  |||||  || |||||||||| || || |||| ||||||||||  | |||||| |||||| |||| ||||||||     
T  26485783 taaggttattatagtaaaagtatatattattgtatcaaaagtagtaacatttattgaatgtcttggtttatgtaaaatgtcaaaaagtgacaattaaaaa 26485684  T
Q  101 gaaacggatgtagtattaatgagaaga 127  Q
    | ||| || ||||||||| | ||||||    
T  26485683 ggaacagaggtagtattagttagaaga 26485657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 23777439 - 23777537
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||| |||||||||||||||||  |||||  || |||||||||| || || || | |||||||||| || |||||| |||||| |||| ||||||||    
T  23777439 taaggttattatagtaaaagtatatattattgtatcaaaagtagtaacatttatttaatgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaa 23777537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 34730703 - 34730816
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||| ||||  || ||  || |||||||||| || |  |||| |||||||||| ||||||||||||||||  ||||||||||||     
T  34730703 taaggttattatagtaaaaatatacattgttgtatcaaaagtagtaacattcattgaatgtcttggtttgtataaaatatcaaaa-atgataattaaaaa 34730801  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  34730802 ggaacggaggtagta 34730816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 24949253 - 24949364
Alignment:
Q  4 ggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaa 103  Q
    ||||||||||||||||||| |  | |||  || |||||||||| || || |||||||| |||||| || |||||||||||||  | | |||||||| | |    
T  24949253 ggtcattatagtaaaagtaaaaataattgtatcaaaagtagtaacatttattgattgttttggtttgtgtaaaatatcaaaaaataacaattaaaaagga 24949352  T
Q  104 acggatgtagta 115  Q
    ||||| ||||||    
T  24949353 acggaggtagta 24949364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 7056237 - 7056140
Alignment:
Q  2 aaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||| ||||||||||||| ||| |||||| ||| |||||||  |  |||| |||||| ||||| || || |||||| |||||| |||| ||||||||    
T  7056237 aaggttattatagtaaaagaataacttattgcatcaaaagtaaaaataattattgattatcttgatttgtgtaaaatgtcaaaaagtgacaattaaaa 7056140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 22784759 - 22784658
Alignment:
Q  8 attatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgg 107  Q
    |||||||||||||||||  |||||  || ||||||||||||| || |||| | ||||||||  | |||||| | |||| |||| |||||||| | |||||    
T  22784759 attatagtaaaagtatacattattgtatcaaaagtagtatcatttattgaatatcttggtttatgtaaaatgttaaaaagtgacaattaaaaaggaacgg 22784660  T
Q  108 at 109  Q
    ||    
T  22784659 at 22784658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 1249689 - 1249797
Alignment:
Q  8 attatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgg 107  Q
    |||||||||||| |||   |||||  || |||| ||||| || || ||||||||||| |||  |||||||||||| || |||| |||||||| | ||||     
T  1249689 attatagtaaaaatatcaattattgtatcaaaaatagtaacatttattgattgtcttagtttatataaaatatcataaagtgacaattaaaaaggaacga 1249788  T
Q  108 atgtagtat 116  Q
    |||||||||    
T  1249789 atgtagtat 1249797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 44069177 - 44069291
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||     
T  44069177 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 44069276  T
Q  101 gaaacggatgtagta 115  Q
    |||||||| ||||||    
T  44069277 gaaacggaggtagta 44069291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 8735535 - 8735649
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||     
T  8735535 taagatcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaa 8735634  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  8735635 ggaacggaggtagta 8735649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 44217853 - 44217966
Alignment:
Q  2 aaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatg 101  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||| |    
T  44217853 aaggtcattatagtaaaagtatatcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaag 44217952  T
Q  102 aaacggatgtagta 115  Q
     |||||| ||||||    
T  44217953 gaacggaggtagta 44217966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21044845 - 21044747
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| || |||||| ||||||||||||||| ||||    
T  21044845 taaggtcattatagtaaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataataaaaa 21044747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 35232396 - 35232282
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||     
T  35232396 taaggtcattatagtaaaagtatatcttattgcatcaaaagcagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 35232297  T
Q  101 gaaacggatgtagta 115  Q
      |||||||||||||    
T  35232296 agaacggatgtagta 35232282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 38617405 - 38617290
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||  |||||| || |||||||||||||||||| ||||||||     
T  38617405 taaggtcattatagtaaaaatatagcttattgcatcaaaagtagtatcaattgttgattg--ttggtttgtgtaaaatatcaaaatgtgacaattaaaaa 38617308  T
Q  101 gaaacggatgtagtatta 118  Q
    | |||||| |||||||||    
T  38617307 ggaacggaggtagtatta 38617290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 44014011 - 44013897
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||| || |||||| ||||||||||| ||||||||     
T  44014011 taaggtcattatagtaaaagtatagcttattgcatcaaaaatagtttcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 44013912  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  44013911 ggaacggaggtagta 44013897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 13629291 - 13629174
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||     
T  13629291 taaggttattatagtaaaagtatagcttattgcatgaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 13629192  T
Q  101 gaaacggatgtagtatta 118  Q
    | ||| || |||||||||    
T  13629191 ggaacagaggtagtatta 13629174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 29295500 - 29295617
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||| |||||||||| |||||| |||  ||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||     
T  29295500 taaggtcattatattaaaagtataacttattgcatcgaaagtagtatcaattattgattgtcttggtttgtgtaaaatatcaaaatgtgataattaaaaa 29295599  T
Q  101 gaaacggatgtagtatta 118  Q
     |||| |||||| |||||    
T  29295600 aaaacagatgtaatatta 29295617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 50623559 - 50623675
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||||||||||| || |||||| | ||||||||| ||||||||     
T  50623559 taaggtcattatagtaaaagtatagcttattgtatcaaaagtagtatcaatttttgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaa- 50623657  T
Q  101 gaaacggatgtagtatta 118  Q
     |||||||||||||||||    
T  50623658 aaaacggatgtagtatta 50623675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 5374448 - 5374336
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||| |||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||| || ||||||||| ||||||| ||| ||||||||     
T  5374448 taagatcattatagtaaaaatatagcttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtataaaatgtcaaaatatgacaattaaaaa 5374349  T
Q  101 gaaacggatgtag 113  Q
    |||||||| ||||    
T  5374348 gaaacggaggtag 5374336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16464880 - 16464764
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| |||| || |||||| ||||||||||| || |||||     
T  16464880 taaggtcattatagtaaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtctaggtttgtgtaaaatgtcaaaatgtgacaactaaaaa 16464781  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  16464780 ggaacggaggtagtatt 16464764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 48782345 - 48782456
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| |||||||| || |||||| ||||||||||| ||||||||     
T  48782345 taaggtcattatagtaaaagtattgcttattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 48782444  T
Q  101 gaaacggatgta 112  Q
      ||||||||||    
T  48782445 tgaacggatgta 48782456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 53599884 - 53599765
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||| || |||||| | ||||||||| ||||||||     
T  53599884 taaggtcattatagtaaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaa 53599785  T
Q  101 gaaacggatgtagtattaat 120  Q
    | |||||| |||||| ||||    
T  53599784 ggaacggaggtagtaataat 53599765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 56576202 - 56576087
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| |||||||| || |||||  ||||||||||| ||||||||     
T  56576202 taaggtcattatagtaaaagtatagcttattgcatcaaaggtagtatcaattgttgattatcttggtttgtgtaaaacgtcaaaatgtgacaattaaaaa 56576103  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  56576102 ggaacggaggtagtat 56576087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3436165 - 3436067
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||| |||||||||||||||||| ||||| ||| ||||||||||| |||||||||||||||||||| || |||||| ||||||||||||||||||||    
T  3436165 taaggttattatagtaaaagtatagtttattgcatcaaaagtagtattaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataattaaaa 3436067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 16664387 - 16664481
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataatt 95  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| || || |||||| ||||||||||| ||||    
T  16664387 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaatt 16664481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 22678407 - 22678309
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||||  |||||||| ||||||||||| ||||||||    
T  22678407 taaggtcattatagtaaaagtatagcttattgcatcaatagtagtatcaattgttgattatcttggtttatataaaatgtcaaaatgtgacaattaaaa 22678309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 33755129 - 33755015
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||  | |||||| | ||||||||| ||||||||     
T  33755129 taaggtcattatagtaaaagtatagcttattgcattaaaaggagtatcaattgttgattgtcttagtttatgtaaaatgttaaaatgtgacaattaaaaa 33755030  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  33755029 ggaacggaggtagta 33755015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36408869 - 36408967
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||||||||||| || |||||| ||||||||||| ||||||||    
T  36408869 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaaatgtttattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 36408967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36423035 - 36423133
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||||||||||| || |||||| ||||||||||| ||||||||    
T  36423035 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaaatgtttattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 36423133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 39671471 - 39671585
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||| || |||||| ||| ||||||| |||||||      
T  39671471 taaggtcattatagtaaaagtatagcttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcataatgtgacaattaaata 39671570  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  39671571 ggaacggaggtagta 39671585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22828499 - 22828383
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| ||||| ||| ||||||||||| || |||||| ||||||||||| ||||||||     
T  22828499 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtagcaattattggttgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 22828400  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  22828399 ggaacggaggtagtatt 22828383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 39683804 - 39683698
Alignment:
Q  9 ttatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgga 108  Q
    ||||| ||||| ||||||||||| ||| |||||||||||||||||||||||||||||||| || |||||| | |||||||||||||||||| | ||||||    
T  39683804 ttatactaaaaatatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtgaaaatgtgataattaaaaaggaacgga 39683705  T
Q  109 tgtagta 115  Q
     ||||||    
T  39683704 ggtagta 39683698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 46872067 - 46872161
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataatt 95  Q
    |||||||||||||||||||| ||| |||||| ||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||    
T  46872067 taaggtcattatagtaaaagaataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaatt 46872161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26620449 - 26620342
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||| |||||| ||  ||||| ||||||||||| ||||||||     
T  26620449 taaggtcattataataaaagtatagcttattgcatcaaaagtagtatcaattgttgtttgttttggtttgtgcaaaatgtcaaaatgtgacaattaaaaa 26620350  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  26620349 ggaacgga 26620342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 35231840 - 35231943
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaa 104  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||  || || |||||| ||||||||||| |||||||| | ||    
T  35231840 gtcattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttaatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 35231939  T
Q  105 cgga 108  Q
    ||||    
T  35231940 cgga 35231943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 19527318 - 19527220
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||| |||||||||||  || ||||||||||||||||||||||| |||||||| || |||||  ||||||||||| ||||||||    
T  19527318 taaggtcattatagtaaaattatagcttattgtatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaacgtcaaaatgtgacaattaaaa 19527220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 31984250 - 31984136
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||| |||||||||||| |||||| ||| |||||||||| ||||| |||||||| |||||| || |||||| |||||| |||| ||||||||     
T  31984250 taaggtcattacagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtgttggtttgtgtaaaatgtcaaaaagtgacaattaaaaa 31984151  T
Q  101 gaaacggatgtagta 115  Q
    |||| ||||||||||    
T  31984150 gaaatggatgtagta 31984136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 42513124 - 42513008
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatc-aaaatgtgataattaaaa 99  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| || || |||||| || ||||||||| ||||||||    
T  42513124 taaggtcatgatagtaaaagtatagcttattgcatcaaaagtagtattaattgttgattgtcttgatttgtgtaaaatttcaaaaatgtgacaattaaaa 42513025  T
Q  100 tgaaacggatgtagtat 116  Q
       |||||| |||||||    
T  42513024 atgaacggaggtagtat 42513008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26906487 - 26906372
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||| |||||||||||| |||||| ||| ||||||| ||||||||||||||||| || ||| || |||||||||||||| ||| ||||||||     
T  26906487 taaggtcattaaagtaaaagtataacttattgcataaaaagtaatatcaattgttgattgttttagtttgtgtaaaatatcaaaatatgacaattaaaaa 26906388  T
Q  101 gaaacggatgtagtat 116  Q
      |||||||| |||||    
T  26906387 tgaacggatgcagtat 26906372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 34464423 - 34464530
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||| |||||||| |||||||| ||  || ||||||||||||||||||| | ||||||||     
T  34464423 taaggtcattatattaaaagtatagcttattgcatcaaaagtaatatcaattattgattgttttaatttgtataaaatatcaaaatgtaacaattaaaaa 34464522  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  34464523 ggaacgga 34464530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 12252242 - 12252355
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaa 104  Q
    |||||||||||||||||||| |||||| ||| ||||||| ||||||||||||||||||||| ||  | |||||| ||||||| ||| | |||||| | ||    
T  12252242 gtcattatagtaaaagtataacttattgcatcaaaagtattatcaattgttgattgtcttgatttatgtaaaatgtcaaaatatgacagttaaaaaggaa 12252341  T
Q  105 cggatgtagtatta 118  Q
    |||| |||||||||    
T  12252342 cggaggtagtatta 12252355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 54231685 - 54231802
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| ||||| |||||||||||| || || |||||| ||||||  ||| ||||||||     
T  54231685 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttgatttgtgtaaaatgtcaaaaaatgacaattaaaaa 54231784  T
Q  101 gaaacggatgtagtatta 118  Q
    | |||||| |||| ||||    
T  54231785 ggaacggaggtagcatta 54231802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 52061708 - 52061824
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaa 104  Q
    |||||||||||||||||||| |||||| ||| |||||||||| ||||  |||||||||||| || || |||||| ||||||| ||| |||||||| | ||    
T  52061708 gtcattatagtaaaagtataacttattgcatcaaaagtagtaacaatgattgattgtcttgatttgtgtaaaatgtcaaaatatgacaattaaaaaggaa 52061807  T
Q  105 cggatgtagtattaatg 121  Q
    |||| |||||| |||||    
T  52061808 cggaggtagtaataatg 52061824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 23237776 - 23237883
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||  | ||| || |||||| | ||||||| | ||||||||     
T  23237776 taaggtcattatagtaaaagtatagcttatcgcatcaaaagtagtatcaattgttgattgttctagtttgtgtaaaatgttaaaatgtaacaattaaaaa 23237875  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  23237876 ggaacgga 23237883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 42099854 - 42099952
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||| |||||||||||| |||||| ||| |||||||||| ||||| ||||||||||||||| || |  ||| ||||||||||| ||||||||    
T  42099854 taaggtcattacagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtttaatgtcaaaatgtgacaattaaaa 42099952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 9834463 - 9834540
Alignment:
Q  38 aaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagta 115  Q
    ||||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||| | |||||| ||||||    
T  9834463 aaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 9834540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 53125336 - 53125240
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaa 97  Q
    |||||||||||||||||||||||| |||||| ||| |||| ||||| ||||| |||||| |||||||| || |||||| ||||||| ||| ||||||    
T  53125336 taaggtcattatagtaaaagtataacttattgcataaaaaatagtaacaattattgattatcttggtttgtgtaaaatgtcaaaatatgacaattaa 53125240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 19093251 - 19093144
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||| | |||||| ||| |||||||||| ||||| |||| | ||||||||  | |||||| ||||||||||| ||||||||     
T  19093251 taaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaattattgactatcttggtttatgtaaaatgtcaaaatgtgacaattaaaaa 19093152  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  19093151 ggaacgga 19093144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 47885085 - 47884978
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||  | |||||| ||| ||||||| ||  |||| |||||||| ||||||||| |||||| ||||||||||| ||||||| |    
T  47885085 taaggtcattatagtaaaagtcaaacttattgcatcaaaagtaataataattattgattgttttggttcgtgtaaaatgtcaaaatgtgacaattaaatt 47884986  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  47884985 ggaacgga 47884978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8741722 - 8741644
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaata 79  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||| |||||  ||||| ||||||||||    
T  8741722 taaggtcattataataaaagtatagcttattgcatcaaaagtaatatcaattgttaattgtaatggtttgtataaaata 8741644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 6195171 - 6195268
Alignment:
Q  2 aaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||| |||||||||||||| |||||| ||| |||||||||| ||||| | ||||||||||||| ||  ||||| |||||| |||| ||||||||    
T  6195171 aaggtcatcatagtaaaagtataacttattgcatcaaaagtagtagcaattatggattgtcttggtttgtgaaaaatgtcaaaaagtgacaattaaaa 6195268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 354112 - 354226
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||| | |||||| ||| |||| ||||| ||||  |||| | ||||||||  | |||||| ||||||||||| ||||||||     
T  354112 taaggtcattatagtaaaagtacaacttattgcatcaaaaatagtaacaatcattgactatcttggtttatgtaaaatgtcaaaatgtgacaattaaaaa 354211  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  354212 ggaacggaggtagta 354226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 32239552 - 32239606
Alignment:
Q  11 atagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttg 65  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  32239552 atagtaaaagtatagcttattgcatcaaaagtagtatcaattgttaattgtcttg 32239606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 37502168 - 37502266
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||| |||||||||||||||||  |||||  || |||||||||| || || ||||||||||||||| ||||||||| |||||| |||| ||| ||||    
T  37502168 taaggttattatagtaaaagtataaattattgtatcaaaagtagtaacatttattgattgtcttggtttgtataaaatgtcaaaaagtgacaatcaaaa 37502266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 33084624 - 33084683
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattg 60  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| ||||| |||||||    
T  33084624 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaattattgattg 33084683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 44549789 - 44549903
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||| |||||||||| ||||||  || ||||||||||  |||| ||||| || ||| ||  ||||||||||||||  |||||||||||||     
T  44549789 taaggtcattataataaaagtataacttattgtatcaaaagtagtaataattattgatcgttttgatttatataaaatatcaaacagtgataattaaaa- 44549887  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  44549888 ggaacggaggtagtat 44549903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 47251559 - 47251674
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||| |||||||| | |||||| ||| |||||||||| ||||  |||||| | ||||||  | ||||||   ||||||||| ||||||||     
T  47251559 taaggtcattataataaaagtacaacttattgcatcaaaagtagtaacaatcattgattattttggtttatgtaaaatgataaaatgtgacaattaaaaa 47251658  T
Q  101 gaaacggatgtagtat 116  Q
    |||||||| |||||||    
T  47251659 gaaacggaggtagtat 47251674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 55147159 - 55147092
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggtt 68  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||| || ||||| || ||||||||||||    
T  55147159 taaggtcattacagtaaaagtatagcttattgcatcaaaagtaataacaattattaattgtcttggtt 55147092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 55703066 - 55703173
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||| ||||||||||| |||| |||||| ||| ||||||| || ||||| ||||||||||||||   | |||||| ||||||| ||| ||||||||     
T  55703066 taaggtcgttatagtaaaaatataacttattgcatcaaaagtaataacaattattgattgtcttggtatatgtaaaatgtcaaaatatgacaattaaaaa 55703165  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  55703166 ggaacgga 55703173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38542374 - 38542276
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||| |||||||||||||||| || |||||| ||| |||||||||| ||||| || ||||||||||||  | |||||| ||||||  ||| ||||||||    
T  38542374 taagttcattatagtaaaagtctaacttattgcatcaaaagtagtaacaattattaattgtcttggtttatgtaaaatgtcaaaaaatgacaattaaaa 38542276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 42645407 - 42645505
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||| ||||||| ||||||||||| |||||| ||| ||||||| || ||||| |||||| |||| ||   | |||||| ||||||||||||||||||||    
T  42645407 taagatcattatggtaaaagtataacttattgcatcaaaagtaataacaattattgattatcttagtatatgtaaaatgtcaaaatgtgataattaaaa 42645505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 36659521 - 36659408
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaa 104  Q
    |||||||||||||||| ||| |||||| |||||||| ||  | ||||| |||||||||||| || || |||||| ||||||  ||| |||||| | | ||    
T  36659521 gtcattatagtaaaagcataacttattgcattaaaaataaaaacaattattgattgtcttgatttgtgtaaaatgtcaaaaaatgacaattaagaaggaa 36659422  T
Q  105 cggatgtagtatta 118  Q
    |||| |||||||||    
T  36659421 cggaggtagtatta 36659408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 42629499 - 42629580
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagtatta 118  Q
    |||||||||| || || ||||||||||||||| || |||||||||||||  ||| ||||||||   ||||||||||||||||    
T  42629499 aaaagtagtaacatttattgattgtcttggtttgtgtaaaatatcaaaaaatgacaattaaaaacgaacggatgtagtatta 42629580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 31862084 - 31862000
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaa 85  Q
    ||||||||||||||||||||||||  || || ||| |||||||||| ||||| |||||| |||| ||| || |||||| ||||||    
T  31862084 taaggtcattatagtaaaagtataattttttgcatcaaaagtagtaacaattattgattatcttagtttgtgtaaaatttcaaaa 31862000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40412089 - 40412152
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtctt 64  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||| ||||| || ||||||||    
T  40412089 taaggtcattatagtaaaaatataacttattacatcaaaaatagtaacaattattaattgtctt 40412152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 47428737 - 47428784
Alignment:
Q  73 taaaatatcaaaatgtgataattaaaatgaaacggatgtagtattaat 120  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||||    
T  47428737 taaaatatcaaaatgtgacaattaaaaaggaacggatgtagtattaat 47428784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 52677229 - 52677166
Alignment:
Q  36 taaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||| ||||||| |||||||| |||||| || |||||| ||||||||||| ||||||||    
T  52677229 taaaagtagcatcaattattgattgttttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 52677166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23621950 - 23621905
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagta 46  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||    
T  23621950 taaggtcattatagtaaaagtatagtttattgcatcaaaagtagta 23621905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 49089105 - 49089166
Alignment:
Q  54 ttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagta 115  Q
    |||||||||||||||||  ||||||||||||| |||| |||||||| | |||||| ||||||    
T  49089105 ttgattgtcttggttcgagtaaaatatcaaaaagtgacaattaaaaaggaacggaggtagta 49089166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 47093958 - 47094017
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattg 60  Q
    |||| ||||||||||||||||||| |||||| ||| |||||||| | ||||| |||||||    
T  47093958 taagatcattatagtaaaagtataacttattgcatcaaaagtagaaacaattattgattg 47094017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 53745385 - 53745269
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| || |||||| ||||||||||| ||||||||     
T  53745385 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 53745286  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||||||||||||    
T  53745285 ggaacggatgtagtatt 53745269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 790693 - 790800
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||     
T  790693 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgatcattaaaaa 790792  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  790793 ggaacgga 790800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 47069953 - 47069843
Alignment:
Q  8 attatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgg 107  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||| |||||||    
T  47069953 attatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacgg 47069854  T
Q  108 atgtagtatta 118  Q
    |||||||||||    
T  47069853 atgtagtatta 47069843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 43554532 - 43554647
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||  ||||||||||||||||||||||| || |||||| ||||||||||| ||||||||     
T  43554532 taaggtcattatagtaaaagtatagcttattgcatcaaaagtatgatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 43554631  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  43554632 gtaacggaggtagtat 43554647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 29803791 - 29803905
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||| ||||||||||||||||||| |||||| ||| || | |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||     
T  29803791 taagatcattatagtaaaagtataacttattgcatcaataatagtatcaattgttgattgtcttggttcgtgtaaaatatcaaaatgtgacaattaaaaa 29803890  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  29803891 ggaacggaggtagta 29803905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 34266543 - 34266429
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| || |||||| |||||||||||  |||||||     
T  34266543 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacgattaaaaa 34266444  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  34266443 ggaacggaggtagta 34266429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 6902421 - 6902527
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||| ||||||||| || |||||||||||||||||| | ||||||     
T  6902421 taaggtcattatagtaaaattatagcttattgcatcaaatgtagtatcaattgttgatggtcttggtttgtgtaaaatatcaaaatgtgacagttaaaaa 6902520  T
Q  101 gaaacgg 107  Q
    |||||||    
T  6902521 gaaacgg 6902527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 27992383 - 27992481
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||| | || |||||| ||||||||||| ||||||||    
T  27992383 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtattgggttgtgtaaaatgtcaaaatgtgacaattaaaa 27992481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 54898189 - 54898091
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||  | |||||| ||||||||||| ||||||||    
T  54898189 taaggtcattataataaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaa 54898091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 46973566 - 46973674
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||| |||||||||| |||||| ||| ||||||||||||||||||||||||  |||||| || |||||||||||||||| | ||||||||     
T  46973566 taaggtcattataataaaagtataacttattgcatcaaaagtagtatcaattgttgattgctttggtttgtgtaaaatatcaaaatgtaacaattaaaaa 46973665  T
Q  101 gaaacggat 109  Q
    |||||||||    
T  46973666 gaaacggat 46973674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 19550389 - 19550504
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||| ||| || |||||| ||||||||||| ||||||||     
T  19550389 taaggtcattatagtaaaaatatagcttattgcatcaaaagtaatatcaattgttgattgtcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaa 19550488  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||  |||||||    
T  19550489 ggaacgggggtagtat 19550504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 45101461 - 45101347
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||| |||||||||||||||| ||| |||||||| ||||  ||||||||||||||||| || |||||| ||||||||||| ||||||||     
T  45101461 taaggtcattataggaaaagtatagcttattgcatcaaaagtagcatcagctgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 45101362  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  45101361 ggaacggaggtagta 45101347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 54106406 - 54106520
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||  | |||||| ||||||||| | ||||||||     
T  54106406 taaggtcattatagtaaaagtatagtttattgcatcaaaagtaatatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtaacaattaaaaa 54106505  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  54106506 ggaacggaggtagta 54106520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 29698136 - 29698241
Alignment:
Q  3 aggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatga 102  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||  || || |||||| ||||||||||| |||||||| |     
T  29698136 aggtcattatagtaaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtcttaatttgtgtaaaatgtcaaaatgtgacaattaaaaagg 29698235  T
Q  103 aacgga 108  Q
    ||||||    
T  29698236 aacgga 29698241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 24981433 - 24981544
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| |||| ||| ||  ||||| ||||||||||| ||||||||     
T  24981433 taaggtcattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattatcttagtttgtgcaaaatgtcaaaatgtgacaattaaaaa 24981532  T
Q  101 gaaacggatgta 112  Q
      ||||||||||    
T  24981533 agaacggatgta 24981544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 43945522 - 43945637
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||| |||||| ||||||||||||| ||||| ||| |||| |||||||||||||||||||||||||||  |||||||| ||||||||||| || |||||     
T  43945522 taagatcattacagtaaaagtatagtttattgcatcaaaaatagtatcaattgttgattgtcttggtttatataaaatgtcaaaatgtgacaactaaaaa 43945621  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  43945622 ggaacggaggtagtat 43945637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 29651815 - 29651909
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||| |||||| || |||||| | ||||||||| ||||||||    
T  29651815 gtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaactgttgattgttttggtttgtgtaaaatgtaaaaatgtgacaattaaaa 29651909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42671993 - 42671895
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||| |||||||||||||||||| ||||| ||| ||||||| |||||||||||||||||||| |||  |||||||| ||||||||||| ||||||||    
T  42671993 taaggttattatagtaaaagtatagtttattgcatcaaaagtaatatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaattaaaa 42671895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 52663585 - 52663683
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||||||||| ||||||||||||||| || | |||| ||||||| ||| ||||||||    
T  52663585 taaggtcattatagcaaaagtatagcttattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtgaaatgtcaaaatatgacaattaaaa 52663683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 51219199 - 51219080
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaatt---gttgattgtcttggttcgtataaaatatcaaaatgtgataattaa 97  Q
    |||| ||||||||||||||||||| |||||| ||| ||||||||||||||||   |||||||||||||||| || |||||| |||| |||||| ||||||    
T  51219199 taagatcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgttgattgtcttggtttgtgtaaaatgtcaatatgtgacaattaa 51219100  T
Q  98 aatgaaacggatgtagtatt 117  Q
    || | |||||| ||||||||    
T  51219099 aaaggaacggaggtagtatt 51219080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 51697667 - 51697571
Alignment:
Q  1 taaggtcattatagtaaaa-gtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataatta 96  Q
    ||||||||||||||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||| || |||||| ||||||| ||| |||||    
T  51697667 taaggtcattatagtaaaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatatgacaatta 51697571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 13158542 - 13158423
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||||||| || ||||||||||||  | |||||| ||||||| | | ||||||||     
T  13158542 taaggtcattatagtaaaagtataacttattatatcaaaagtagtatcaattttttattgtcttggtttatgtaaaatgtcaaaatataacaattaaaaa 13158443  T
Q  101 gaaacggatgtagtattaat 120  Q
    | |||||| |||||| ||||    
T  13158442 ggaacggaggtagtaataat 13158423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 32980783 - 32980898
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||| |||| |||||||||| |||||| ||| ||||||| || ||||| ||||||||||||||| || |||||| ||||||||||| ||||||||     
T  32980783 taaggtcagtataataaaagtataacttattgcatcaaaagtattaacaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 32980882  T
Q  101 gaaacggatgtagtat 116  Q
    | ||| ||||||||||    
T  32980883 ggaacagatgtagtat 32980898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27483891 - 27483793
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||| |||| |||||| ||| |||||||||||||||||||||||||| || || ||||||||| | ||||| ||| ||||||||    
T  27483891 taaggtcattatagtaaaaatataacttattgcatcaaaagtagtatcaattgttgattgtcctgatttgtataaaatgttaaaatatgacaattaaaa 27483793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 35315276 - 35315392
Alignment:
Q  2 aaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatg 101  Q
    |||||||||||| |||||||||| |||||| ||| |||||||||| |||||||||||||||||| || || |||||| ||||||  ||| |||||||| |    
T  35315276 aaggtcattataataaaagtataacttattgcatcaaaagtagtaacaattgttgattgtcttgatttgtgtaaaatgtcaaaaaatgacaattaaaaag 35315375  T
Q  102 aaacggatgtagtatta 118  Q
     ||||||  ||||||||    
T  35315376 gaacggagttagtatta 35315392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 51244767 - 51244874
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||| |||||||| ||||| ||| ||||||| ||| |||| ||||||||||||||||||||||||||| || |||||||||||||| | | || |||||     
T  51244767 taagatcattataataaaaatatggcttattgcatcaaaactagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatattacaagtaaaaa 51244866  T
Q  101 gaaacgga 108  Q
    ||||||||    
T  51244867 gaaacgga 51244874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 40139937 - 40139860
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaat 78  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| ||||| ||||||||||||||| || ||||||    
T  40139937 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaat 40139860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 43775493 - 43775379
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||| | |||||| ||| |||||||||| ||||  |||| | ||||||||  | |||||| ||||||||||| ||||||||     
T  43775493 taaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaaatgtgaaaattaaaaa 43775394  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  43775393 ggaacggaggtagta 43775379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 39866951 - 39866854
Alignment:
Q  2 aaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||| ||| |||||| ||| |||||||  | ||||| ||||||||||||||| || |||||| |||||| |||| ||||||||    
T  39866951 aaggtcattatagtaaaagcataacttattgcatcaaaagtaaaaacaattattgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaa 39866854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 41168916 - 41168999
Alignment:
Q  19 agtatagcttattacattaaaagta---gtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||| ||| |||||||   ||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||    
T  41168916 agtatagcttattgcatcaaaagtagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 41168999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 13168193 - 13168261
Alignment:
Q  46 atcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagt 114  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||| |||||||| | ||||||||||||    
T  13168193 atcaattgttgattgtcttggtttgtataaaatgtaaaaatgtgacaattaaaaaggaacggatgtagt 13168261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 36234510 - 36234621
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||| |||||| |||||||||||||||||||  || |||||||   ||| || |||||||||||  || || |||||||||||||||||| ||||||||     
T  36234510 taagatcattacagtaaaagtatagcttattgtatcaaaagta---tcactttttgattgtcttaatttgtgtaaaatatcaaaatgtgacaattaaaaa 36234606  T
Q  101 gaaacggatgtagta 115  Q
    | |||||||||||||    
T  36234607 ggaacggatgtagta 36234621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 54911404 - 54911341
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtctt 64  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| ||||| |||||||||||    
T  54911404 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtctt 54911341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 33491242 - 33491128
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| ||||||||||||||||| |||||| ||| |||||||||| ||||  |||| | |||| |||  | |||||| ||||||||||| ||||||||     
T  33491242 taaggttattatagtaaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttagtttatgtaaaatgtcaaaatgtgacaattaaaaa 33491143  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  33491142 ggaacggaggtagta 33491128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 45145271 - 45145369
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||| ||||||||||||||||||| |||||| ||  ||||||| ||  |||| ||||||||||||||| || |||||||||||||  ||| ||||||||    
T  45145271 taagatcattatagtaaaagtataacttattgcagcaaaagtaataataattattgattgtcttggtttgtgtaaaatatcaaaaaatgacaattaaaa 45145369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 45513381 - 45513307
Alignment:
Q  41 gtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagta 115  Q
    ||||||||||||||||||||| ||| || || |||||||||||||| ||| |||||||| | |||||||||||||    
T  45513381 gtagtatcaattgttgattgttttgatttgtgtaaaatatcaaaatatgacaattaaaaaggaacggatgtagta 45513307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 52627337 - 52627234
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaa 104  Q
    |||||||||||||||||||| |||||| ||| ||||||| ||||||| ||| ||| |||||||  |   ||||| ||||||||||| |||||||| | ||    
T  52627337 gtcattatagtaaaagtataacttattgcatcaaaagtaatatcaatcgttaattatcttggtatgaggaaaatgtcaaaatgtgacaattaaaaaggaa 52627238  T
Q  105 cgga 108  Q
    ||||    
T  52627237 cgga 52627234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 41351297 - 41351181
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||||||||  |||||| || |||||||||| || |  |||| ||||||| ||  | |||||||||| || |||| ||||||||     
T  41351297 taaggttattatagtaaaagtatatattattatatcaaaagtagtaacattaattgaatgtcttgatttatgtaaaatatcagaaagtgacaattaaaaa 41351198  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  41351197 ggaacggaggtagtatt 41351181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 7329004 - 7329083
Alignment:
Q  38 aaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagtatt 117  Q
    ||||||||| ||||| ||||||||||| ||| || |||||| | ||||||||| |||||||| |||| ||| ||||||||    
T  7329004 aaagtagtaacaattattgattgtcttagtttgtgtaaaatgttaaaatgtgacaattaaaaagaaatggaggtagtatt 7329083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 49123666 - 49123779
Alignment:
Q  1 taaggtcattatagtaaaagt--atagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaa 98  Q
    |||||||||||||||||||||  |||| ||||| ||| ||| |||||||||||||   ||| ||||| || || |||||| |||||||||||  ||||||    
T  49123666 taaggtcattatagtaaaagtgtatagtttattgcatcaaatgtagtatcaattg---attatcttgatttgtgtaaaatgtcaaaatgtgactattaaa 49123762  T
Q  99 atgaaacggatgtagta 115  Q
    | | |||||| ||||||    
T  49123763 aaggaacggaggtagta 49123779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 52175911 - 52175974
Alignment:
Q  50 attgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtag 113  Q
    |||||| |||||||||||| || |||||| ||||||||| |||||||||| | |||||||||||    
T  52175911 attgttaattgtcttggtttgtgtaaaatgtcaaaatgtcataattaaaaaggaacggatgtag 52175974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3376407 - 3376318
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtga 90  Q
    ||||||||||||||||||| || | |||||||||| |||| ||||| ||||  |||||| |||| |||  | |||||| |||||||||||    
T  3376407 taaggtcattatagtaaaaatacaacttattacataaaaaatagtaacaatcattgattatcttagtttatgtaaaatgtcaaaatgtga 3376318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41926821 - 41926921
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaa---agtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaa 97  Q
    |||| |||| |||||||||||||| |||||| ||| |||   ||||||| ||||| ||||||||||||||| || |||||| | |||| |||| ||||||    
T  41926821 taagatcatcatagtaaaagtataacttattgcatcaaaagtagtagtaacaattattgattgtcttggtttgtgtaaaatgt-aaaaagtgacaattaa 41926919  T
Q  98 aa 99  Q
    ||    
T  41926920 aa 41926921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 25983761 - 25983668
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||| |||||| ||| |||| ||||| ||||||| |||| ||||  || || |||||| ||||||  ||| ||||||||    
T  25983761 gtcattatagtaaaagtataacttatt-catcaaaaatagtaacaattgtagattatcttaatttgtgtaaaatgtcaaaaactgacaattaaaa 25983668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28885821 - 28885918
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||| |||||| | |||||| ||| |||||||||| ||||  |||| | ||||||||  | |||||| | ||||||||| ||||||||    
T  28885821 taaggtcattatagt-aaagtacaacttattgcatcaaaagtagtaacaataattgactatcttggtttatgtaaaatgttaaaatgtgacaattaaaa 28885918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 29458306 - 29458208
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||| |||||||||||| || |  |||||  || |||||||| | || || ||||||||||||||| || |||||| |||||||||||  |||||||    
T  29458306 taaggttattatagtaaaaatagaaattattgtatcaaaagtagcaacatttattgattgtcttggtttgtgtaaaatgtcaaaatgtgacgattaaaa 29458208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 33074381 - 33074283
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||| |||||||||||| || |  |||||  || |||||||| | || || ||||||||||||||| || |||||| ||||||||||| || |||||    
T  33074381 taaggttattatagtaaaaataaaaattattgtatcaaaagtagcagcatttattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaaataaaa 33074283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 41425808 - 41425886
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagta 115  Q
    |||||||| | || || ||||||||||||||| || |||||| | ||||||||| |||||||| | |||||| ||||||    
T  41425808 aaaagtagcaacatttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagta 41425886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 51065062 - 51065124
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||| || || ||||||||||||||| || |||||| | |||| |||||||||||||    
T  51065062 aaaagtagtaacatttattgattgtcttggtttgtgtaaaatgttaaaaagtgataattaaaa 51065124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 20848791 - 20848710
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagtatta 118  Q
    |||||||||| || || |||||| | |||||| || |||||| ||||||||||| | |||||| | |||||| |||||||||    
T  20848791 aaaagtagtaacatttattgattattttggtttgtgtaaaatgtcaaaatgtgacagttaaaaaggaacggaggtagtatta 20848710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45513718 - 45513673
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagta 46  Q
    ||||||||||||||||||| ||||| ||||| ||| ||||||||||    
T  45513718 taaggtcattatagtaaaaatatagtttattgcatcaaaagtagta 45513673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17102897 - 17102957
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgt 61  Q
    ||||||||||||| ||||||||||  ||||| ||| |||||||||| ||||| || |||||    
T  17102897 taaggtcattataataaaagtataaattattgcatcaaaagtagtaacaattattaattgt 17102957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 48214205 - 48214317
Alignment:
Q  8 attatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgg 107  Q
    ||||||||||||||||    ||||  || ||||||||||  | || |||||||| |||||  || |||||| |||||| |||| |||||||| | ||| |    
T  48214205 attatagtaaaagtatgaagtattgtatcaaaagtagtaatatttattgattgtattggtgtgtgtaaaatgtcaaaaagtgacaattaaaaaggaacag 48214304  T
Q  108 atgtagtattaat 120  Q
    |||||||||||||    
T  48214305 atgtagtattaat 48214317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35531389 - 35531273
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||     
T  35531389 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 35531290  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  35531289 ggaacggaggtagtatt 35531273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 43500649 - 43500763
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||     
T  43500649 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 43500748  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  43500749 ggaacggaggtagta 43500763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 30686554 - 30686671
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||| |||| ||||||||     
T  30686554 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaacgtgacaattaaaaa 30686653  T
Q  101 gaaacggatgtagtatta 118  Q
    | |||||| |||||||||    
T  30686654 ggaacggaggtagtatta 30686671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 8464351 - 8464236
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||  | |||||| ||||||||||| ||||||||     
T  8464351 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaa 8464252  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  8464251 ggaacggaagtagtat 8464236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 13566822 - 13566936
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||     
T  13566822 taaggtcattatagtaaaaatatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 13566921  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  13566922 ggaacggaggtagta 13566936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 38648600 - 38648714
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| || || |||||| ||||||||||| ||||||||     
T  38648600 taaggtcattatagtaaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaa 38648699  T
Q  101 gaaacggatgtagta 115  Q
    |||||||| ||||||    
T  38648700 gaaacggaggtagta 38648714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29830896 - 29831012
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||||||||| || |||||| ||||||||||| ||||||||     
T  29830896 taaggtcattatagtaaaagtatagcttattgcatcaaaagtaatatcaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 29830995  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  29830996 ggaacggaggtagtatt 29831012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 1024699 - 1024813
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||| ||||||||     
T  1024699 taagatcattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattgttttggtttgtgtaaaatatcaaaatgtgacaattaaaaa 1024798  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  1024799 ggaacggaggtagta 1024813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12231165 - 12231051
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||  | |||||| ||||||||||| ||||||||     
T  12231165 taaggtcattatagtaaaagtacagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaa 12231066  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  12231065 ggaacggaggtagta 12231051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 19349473 - 19349375
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || |||||| ||| ||||||| ||||||||    
T  19349473 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcagaatgtgacaattaaaa 19349375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 21927790 - 21927678
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| || |||||| ||  ||||||| ||||||||     
T  21927790 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttagtttgtgtaaaatgtc--aatgtgacaattaaaaa 21927693  T
Q  101 gaaacggatgtagta 115  Q
    | |||||||||||||    
T  21927692 ggaacggatgtagta 21927678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 45226667 - 45226568
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaa 104  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||  || ||||||||| ||||||||||| |||||||| ||||    
T  45226667 gtcattataataaaagtatagcttattacatcaaaagtagtatcaattgttgattgtcttaatttgtataaaatgtcaaaatgtgacaattaaaaagaaa 45226568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1429427 - 1429525
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| ||||||||| ||| || |||||||||||||||||| ||||||||    
T  1429427 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcatttgtagattgtcttagtttgtgtaaaatatcaaaatgtgacaattaaaa 1429525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1677341 - 1677439
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||| || || |||||| ||||||||||| ||||||||    
T  1677341 taaggtcaatatagtaaaagtatagcttattgcattaaaagtagtatcaattattgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaa 1677439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 7783093 - 7783191
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||| | ||| ||| ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||||    
T  7783093 taaggtcattatagtaaaagtatagttaattgcatcaaaagtagtatcaattgttgattatcttggtttgtataaaatgtcaaaatgtgacaattaaaa 7783191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 20605718 - 20605620
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || |||||| ||||||| ||| ||||||||    
T  20605718 taaggtcattataataaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatatgacaattaaaa 20605620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 45368231 - 45368329
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| || |||||| |||||||| || ||||||||    
T  45368231 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgttttggtttgtgtaaaatgtcaaaatgcgacaattaaaa 45368329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 49908276 - 49908164
Alignment:
Q  1 taaggtcattatagtaaaagtata---gcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaa 97  Q
    ||||||||||||||||||| ||||   | ||||| ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  49908276 taaggtcattatagtaaaaatataatagtttattgcatcaaaagtagtatcaattgttgattgtcttagttcgtataaaatgtcaaaatgtgataattaa 49908177  T
Q  98 aatgaaacggatg 110  Q
    || | ||||||||    
T  49908176 aaagtaacggatg 49908164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 13507917 - 13508027
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaa 104  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||||| |||||||||||| ||  | |||||| |||||||||||||||||||| | ||    
T  13507917 gtcattatagtaaaagtatagcttattgcatccaaagtagtatcaattattgattgtcttgatttatgtaaaatgtcaaaatgtgataattaaaaaggaa 13508016  T
Q  105 cggatgtagta 115  Q
    |||| ||||||    
T  13508017 cggaggtagta 13508027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 13515105 - 13515215
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaa 104  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||||| |||||||||||| ||  | |||||| |||||||||||||||||||| | ||    
T  13515105 gtcattatagtaaaagtatagcttattgcatccaaagtagtatcaattattgattgtcttgatttatgtaaaatgtcaaaatgtgataattaaaaaggaa 13515204  T
Q  105 cggatgtagta 115  Q
    |||| ||||||    
T  13515205 cggaggtagta 13515215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 37437147 - 37437049
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||||||||||||| || |||||| ||||||| ||| ||||||||    
T  37437147 taaggtcattatagtaaaagtatagcttattgcatcaaaagtggtatcaattattgattgtcttggtttgtgtaaaatgtcaaaatatgacaattaaaa 37437049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 49497295 - 49497402
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| |||| || ||||||||||| |||||||| ||| ||||||||||||||||||| | ||||||||     
T  49497295 taaggtcattatagtaaaagtataacttattgcatcaaaaataatatcaattgttaattgtcttagtttgtataaaatatcaaaatgtaacaattaaaaa 49497394  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  49497395 ggaacgga 49497402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 35483875 - 35483777
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||| |||| || ||||||||||||||||| |||||| || |||||| ||||||| ||| ||||||||    
T  35483875 taaggtcattatagtaaaagtatagcttattgcatcaaaaataatatcaattgttgattgttttggtttgtgtaaaatgtcaaaatatgacaattaaaa 35483777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28679164 - 28679267
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||  ||||| ||| ||||||||||| ||||||| ||||||||  ||  |||||||| ||||||||||||||||||||     
T  28679164 taaggtcattatagtaaaagtataatttattgcatcaaaagtagtataaattgttaattgtcttaatttatataaaatgtcaaaatgtgataattaaaaa 28679263  T
Q  101 gaaa 104  Q
    ||||    
T  28679264 gaaa 28679267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 50825666 - 50825553
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| ||| ||||||||||||||||| ||  ||||| |||||| |||| ||||||||     
T  50825666 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtagcaa-tgttgattgtcttggtttgtgaaaaatgtcaaaaagtgacaattaaaaa 50825568  T
Q  101 gaaacggatgtagta 115  Q
     ||||||| ||||||    
T  50825567 aaaacggaggtagta 50825553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 37609395 - 37609291
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||   ||||||||||||||||||||||| ||  | |||||| ||||||||||| ||||||||     
T  37609395 taaggtcattatagtaaaagtatagcttattgcatcaaa---agtatcaattgttgattgtcttgatttatgtaaaatgtcaaaatgtgacaattaaaaa 37609299  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  37609298 ggaacgga 37609291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 52749165 - 52749243
Alignment:
Q  8 attatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaat 86  Q
    |||||||||||||||||| ||||| ||| |||| |||||||||||||||||||||||| ||||| |||||| |||||||    
T  52749165 attatagtaaaagtatagtttattgcatcaaaaatagtatcaattgttgattgtcttgattcgtgtaaaatgtcaaaat 52749243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 12124794 - 12124903
Alignment:
Q  8 attatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgg 107  Q
    ||||||||||||||||| |||||| ||| |||||||| |||||||||||||| ||||| || || ||||||  |||||||||| |||||||| | ||||     
T  12124794 attatagtaaaagtataacttattgcatcaaaagtagcatcaattgttgattatcttgatttgtgtaaaatggcaaaatgtgacaattaaaaaggaacga 12124893  T
Q  108 atgtagtatt 117  Q
    | ||||||||    
T  12124894 aggtagtatt 12124903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 19929560 - 19929453
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| |||||||| | ||||| ||||||||||||||| || |||||| | ||||  ||| ||||||||     
T  19929560 taaggtcattatagtaaaagtataacttattgcatcaaaagtagaaacaattattgattgtcttggtttgtgtaaaatgttaaaaaatgacaattaaaaa 19929461  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  19929460 ggaacgga 19929453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 40926847 - 40926732
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||| |||||||||||||||| ||||||  || |||||||||| ||||| |||||||| ||||||  | |||||| ||||||||||| ||||||||     
T  40926847 taaggtcgttatagtaaaagtataacttattgtatcaaaagtagtaacaattattgattgtattggtttatgtaaaatgtcaaaatgtgacaattaaaaa 40926748  T
Q  101 gaaacggatgtagtat 116  Q
      |||||| |||||||    
T  40926747 agaacggaggtagtat 40926732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 44182902 - 44183008
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| ||||||| || ||| ||| |||||||| ||||||||||||||| || ||||||   ||||||||| ||||||||     
T  44182902 taaggtcattatagtaaaagtatatcttattatatcaaa-gtaatatcaatttttgattgtcttggtttgtgtaaaatgctaaaatgtgacaattaaaaa 44183000  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  44183001 ggaacgga 44183008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2059906 - 2059808
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||| |||||||| |||||| ||| ||| |||||| ||||| |||||| | |||||| || |||||| ||||||||||| ||||||||    
T  2059906 taaggtcattatagtgaaagtataacttattgcatcaaatgtagtaacaattattgattattttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 2059808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 31588834 - 31588736
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||| |||||||||||||||||||||  || ||||||||||| |||| |||||| |||||||| || ||||||   ||||||||| ||||||||    
T  31588834 taaggtcatcatagtaaaagtatagcttattgtatcaaaagtagtattaatttttgattatcttggtttgtgtaaaatgctaaaatgtgacaattaaaa 31588736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 39412605 - 39412507
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||| |||| |||||| ||| |||||||| | ||||| |||||||| |||||| ||||||||| | |||| |||| ||||||||    
T  39412605 taaggtcattatagtaaaaatataacttattgcatcaaaagtagaaacaattattgattgttttggtttgtataaaatgttaaaaagtgacaattaaaa 39412507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18033920 - 18033805
Alignment:
Q  1 taaggtcattatagtaaaag-tatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||  ||||||||||| ||| ||||  |||||||||||||||||||||||||| |  ||||||   ||||||||| ||||||||    
T  18033920 taaggtcattatagtaaaaaatatagcttattgcatcaaaatgagtatcaattgttgattgtcttggtttgcgtaaaat-gaaaaatgtgacaattaaaa 18033822  T
Q  100 tgaaacggatgtagtat 116  Q
     | |||||| |||||||    
T  18033821 aggaacggaggtagtat 18033805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 32994563 - 32994479
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaa 85  Q
    |||||||||||||||||||||| | |||||| ||| ||||||||||  |||| ||||||||||||||| || |||||| ||||||    
T  32994563 taaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaataattattgattgtcttggtttgtgtaaaatgtcaaaa 32994479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 35255630 - 35255727
Alignment:
Q  2 aaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||| ||| |||||| ||| |||||||  | ||||| |||||||||||||||  | |||||| |||||| |||| ||||||||    
T  35255630 aaggtcattatagtaaaagcataacttattgcatcaaaagtaaaaacaattattgattgtcttggtttatgtaaaatgtcaaaaagtgacaattaaaa 35255727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13699317 - 13699433
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| ||||  |||| | ||||||||  | |||||| ||||||| ||  ||||||||     
T  13699317 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaaatatggcaattaaaaa 13699416  T
Q  101 gaaacggatgtagtatt 117  Q
    | ||||||  |||||||    
T  13699417 ggaacggagatagtatt 13699433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 33720696 - 33720776
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagtatt 117  Q
    |||| |||||||| || |||||  |||||||| || |||||||||||||||| | |||||||| |||||||||||||||||    
T  33720696 aaaaatagtatcatttattgataatcttggtttgtgtaaaatatcaaaatgtaacaattaaaaagaaacggatgtagtatt 33720776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 9127812 - 9127923
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||||||||  |||||  || |||||||||| || || |||| |||||||||| || |||||| |||||| |||| ||||||||     
T  9127812 taaggttattatagtaaaagtatatattattgtatcaaaagtagtaacatttattgaatgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaa 9127911  T
Q  101 gaaacggatgta 112  Q
    | ||| ||||||    
T  9127912 ggaacagatgta 9127923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 32168370 - 32168292
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagta 115  Q
    |||||||||| || || ||||||||||||||| || ||||||||||||| |||| |||||||| | |||||| ||||||    
T  32168370 aaaagtagtaccatttattgattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaacggaggtagta 32168292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 51613590 - 51613668
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagta 115  Q
    ||||||||||||| || ||||||||||||||| || |||||||| |||| |||| |||||||| | |||||| ||||||    
T  51613590 aaaagtagtatcatttattgattgtcttggtttgtgtaaaatataaaaaagtgacaattaaaaaggaacggaggtagta 51613668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 43952931 - 43953017
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaa 97  Q
    |||||||||||||||||||||||| |||||||||| ||||||||          |||||||||||||| || |||||| ||||||||||| ||||||    
T  43952931 taaggtcattatagtaaaagtataacttattacatcaaaagtag----------tgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaa 43953017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 51972370 - 51972277
Alignment:
Q  6 tcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||| |||||| ||| |||||||||| ||| | |||||||||||  || || |||||| |||||| || | ||||||||    
T  51972370 tcattatagtaaaagtataacttattgcatcaaaagtagtaacaactattgattgtcttaatttgtgtaaaatgtcaaaaagtaacaattaaaa 51972277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 35700462 - 35700355
Alignment:
Q  8 attatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgg 107  Q
    ||||||||||||||||   |||||| || |||||||||| || || |||||||||||| || || |||||||||| ||  ||| |||||||| | |||||    
T  35700462 attatagtaaaagtatcaattattatatcaaaagtagtaacatttattgattgtcttgatttgtgtaaaatatcacaaaatgacaattaaaaaggaacgg 35700363  T
Q  108 atgtagta 115  Q
    | ||||||    
T  35700362 aggtagta 35700355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 51974265 - 51974158
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||||||||  |||||  || ||||||||||  | || |||| ||| ||||||||| |||||| |||||| |||| ||||||||     
T  51974265 taaggttattatagtaaaagtatacattattgtatcaaaagtagtaatatttattgaatgttttggttcgtgtaaaatgtcaaaaagtgacaattaaaaa 51974166  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  51974165 ggaacgga 51974158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 37735197 - 37735119
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagta 115  Q
    ||||||||||||| || ||||||||||||||| |  |||||| | |||| ||||||||||||| | |||||| ||||||    
T  37735197 aaaagtagtatcatttattgattgtcttggtttgcgtaaaatttgaaaaagtgataattaaaaaggaacggaggtagta 37735119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 48174726 - 48174660
Alignment:
Q  42 tagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgga 108  Q
    |||||||| || |||||||||||| || || ||||||||||||| ||||||||||||| | ||||||    
T  48174726 tagtatcatttattgattgtcttgatttgtgtaaaatatcaaaaagtgataattaaaaaggaacgga 48174660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 48264810 - 48264752
Alignment:
Q  61 tcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagtattaa 119  Q
    |||||||| ||||||||  ||||||||||| |||||||| |||||||| ||||||||||    
T  48264810 tcttggtttgtataaaacgtcaaaatgtgacaattaaaaagaaacggaggtagtattaa 48264752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44818597 - 44818645
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatca 49  Q
    ||||||||||| ||||||| ||||||||||| ||| |||||||||||||    
T  44818597 taaggtcattacagtaaaactatagcttattgcatcaaaagtagtatca 44818645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 5598224 - 5598295
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgga 108  Q
    ||||||||||  |||| ||||||||||||||| || |||||| ||||||| ||| |||||||| | ||||||    
T  5598224 aaaagtagtaataattattgattgtcttggtttgtgtaaaatgtcaaaatatgacaattaaaaaggaacgga 5598295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10676045 - 10676160
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| ||||||||||||||| | |||||| ||| ||||||| || ||||  |||| | | ||| ||  | |||||| ||||||||||||||||||||     
T  10676045 taaggttattatagtaaaagtacaacttattgcatcaaaagtaataacaatcattgactatattgatttatgtaaaatgtcaaaatgtgataattaaaaa 10676144  T
Q  101 gaaacggatgtagtat 116  Q
    | ||| || |||||||    
T  10676145 ggaacagaggtagtat 10676160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31487873 - 31487766
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||| || |  |||||  || |||||||| |  | || ||||||||||||||| || |||||| ||||||||||| ||||||||     
T  31487873 taaggttattatagtaaaaatagaaattattgtatcaaaagtagcaatatttattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 31487774  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  31487773 ggaacgga 31487766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 4100967 - 4100889
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagta 115  Q
    ||||||| || || || ||||||||||| ||| || ||||||||||||| || |||||||||| | |||||| ||||||    
T  4100967 aaaagtaataacatttattgattgtcttagtttgtgtaaaatatcaaaaagtaataattaaaaaggaacggaggtagta 4100889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 48508276 - 48508382
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||| || |  |||||  || |||||||  | || || |||||| | |||||| ||||||||| ||||||||||| ||||||||     
T  48508276 taaggttattatagtaaaaataaaaattattgtatcaaaagtaacaacatttattgattattttggtttgtataaaatgtcaaaatgtgacaattaaaaa 48508375  T
Q  101 gaaacgg 107  Q
    |||||||    
T  48508376 gaaacgg 48508382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 39073169 - 39073284
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||     
T  39073169 taaggttattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaa 39073268  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  39073269 ggaacggaggtagtat 39073284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 18020862 - 18020748
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  || |||||| ||||||||||| ||||||||     
T  18020862 taaggtcattatagtaaaagtatagcttattgcattaaaagtagtatcaattgttgattgtcttggtctgtgtaaaatgtcaaaatgtgacaattaaaaa 18020763  T
Q  101 gaaacggatgtagta 115  Q
    | |||||||| ||||    
T  18020762 ggaacggatgaagta 18020748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 8825182 - 8825296
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| || || |||||| ||||||||||||||||||||     
T  8825182 taaggtcattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgataattaaaaa 8825281  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  8825282 ggaacggaggtagta 8825296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12869993 - 12869895
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||    
T  12869993 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattatcttggtttgtataaaatatcaaaatgtgacaattaaaa 12869895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 10359329 - 10359222
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| || |||||| ||||||||||| ||||||||     
T  10359329 taaggtcatcatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgttttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 10359230  T
Q  101 gaaacgga 108  Q
    ||||||||    
T  10359229 gaaacgga 10359222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26854189 - 26854074
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||| |||||||| || |||||| ||||||||||| ||||||||     
T  26854189 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattattgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 26854090  T
Q  101 gaaacggatgtagtat 116  Q
    | |||| |||||||||    
T  26854089 ggaacgaatgtagtat 26854074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 38910402 - 38910512
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaa 104  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| || |||||| ||||||||||| |||||||| | ||    
T  38910402 gtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 38910501  T
Q  105 cggatgtagta 115  Q
    |||| ||||||    
T  38910502 cggaggtagta 38910512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 2674067 - 2673958
Alignment:
Q  6 tcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaac 105  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||| || |||||| ||||||||||| |||||||| | |||    
T  2674067 tcattatagtaaaagtatagcttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaac 2673968  T
Q  106 ggatgtagta 115  Q
    ||| ||||||    
T  2673967 ggaggtagta 2673958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 18794908 - 18795025
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||| || || |||||| ||||| ||||| ||||||||     
T  18794908 taaggtcattatagtaaaagtatagcttattacatcaaaagtatgatcaattgttgattgtcttgatttgtgtaaaatgtcaaagtgtgaaaattaaaaa 18795007  T
Q  101 gaaacggatgtagtatta 118  Q
    | |||||| |||||||||    
T  18795008 ggaacggaggtagtatta 18795025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 6754273 - 6754159
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||  ||||||| ||||||||||||||| || |||||| ||||||||||| ||||||||     
T  6754273 taaggtcattatagtaaaagtatagcttattgcatcaaaagtatgatcaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 6754174  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  6754173 ggaacggaagtagta 6754159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 7579762 - 7579644
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaa-gtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||| ||||| ||  |||| ||||||||||||||||||||| |||||| || |||||||||||||||||| ||||||||    
T  7579762 taaggtcattatagtaaaagtatagtttattgcaacaaaaagtagtatcaattgttgattgttttggtttgtgtaaaatatcaaaatgtgacaattaaaa 7579663  T
Q  100 tgaaacggatgtagtatta 118  Q
     | |||||| |||||||||    
T  7579662 aggaacggaggtagtatta 7579644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 38702266 - 38702364
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||  | |||||||| ||||| ||| ||||||||    
T  38702266 taaggtcattatagtaaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatattaaaatatgacaattaaaa 38702364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22582597 - 22582713
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||| |||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||||||||| |||||||||||| |||||||     
T  22582597 taaggtcattatagtacaagtatagtttattgcatcaaaagtagtataaattgttgattgtcttgatttgtataaaatgtcaaaatgtgat-attaaaaa 22582695  T
Q  101 gaaacggatgtagtatta 118  Q
    | |||||| |||||||||    
T  22582696 ggaacggaggtagtatta 22582713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 4175574 - 4175459
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| ||||||||||||||||||||||||  || ||||||||||||||||||| ||||||||| || || |||||| ||||||||||| ||||||||     
T  4175574 taaggttattatagtaaaagtatagcttattgtatcaaaagtagtatcaattgtttattgtcttgctttgtgtaaaatgtcaaaatgtgacaattaaaaa 4175475  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  4175474 ggaacggaggtagtat 4175459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 34261437 - 34261552
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||| |||||||||||  || |||||||||||||||||||||||||||||||| || |||||| ||||||| ||| ||||||||     
T  34261437 taaggtcattatagtaaaaatatagcttattgtatcaaaagtagtatcaattgttgattgtcttggtttgtctaaaatgtcaaaatatgacaattaaaaa 34261536  T
Q  101 gaaacggatgtagtat 116  Q
    | ||| || |||||||    
T  34261537 ggaacagaggtagtat 34261552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 1088019 - 1087913
Alignment:
Q  9 ttatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgga 108  Q
    ||||||||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||| || |||||| | ||||||||| |||||||| ||||||||    
T  1088019 ttatagtaaaaatatagtttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaagaaacgga 1087920  T
Q  109 tgtagta 115  Q
     ||||||    
T  1087919 ggtagta 1087913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 6072577 - 6072691
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||  || || |||||| |  |||||||||||||||||     
T  6072577 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttaatttgtgtaaaatgtttaaatgtgataattaaaaa 6072676  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  6072677 ggaacggaggtagta 6072691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38017371 - 38017273
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| ||| || |||||| | ||||||||| ||||||||    
T  38017371 taaggtcattatagtaaaagtatagcttattgcatcaaaagtaatatcaattgttgattgtcttcgtttgtgtaaaatgttaaaatgtgacaattaaaa 38017273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 42911680 - 42911773
Alignment:
Q  6 tcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||| |||||| ||| |||||||||| ||||| ||||||||||||||| || |||||||||||||||||| ||||||||    
T  42911680 tcattatagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaa 42911773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4098456 - 4098563
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||| ||||| ||||||  || ||||||| |||||||| ||||||||||||||| || |||||| ||||||||||| ||||||||     
T  4098456 taaggtcattatagtaaaggtataacttattgtatcaaaagtaatatcaatttttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 4098555  T
Q  101 gaaacgga 108  Q
    ||||||||    
T  4098556 gaaacgga 4098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 7403977 - 7404084
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||  ||||| ||| |||| |||||||||||||||||| ||||||||  | |||||||||||||||||| ||||||||     
T  7403977 taaggtcattatagtaaaagtataatttattgcatcaaaaatagtatcaattgttgattatcttggtttatgtaaaatatcaaaatgtgacaattaaaaa 7404076  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  7404077 ggaacgga 7404084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 18465829 - 18465920
Alignment:
Q  8 attatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||  |  ||||||||||||| ||||||||||||    
T  18465829 attatagtaaaagtataacttattacatcaaaagtagtatcaattgttgattgttttggtttctgaaaaatatcaaaatatgataattaaaa 18465920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 38363318 - 38363429
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaa 104  Q
    ||||||||||||||||||||| ||||| ||| |||| ||||||||||||||||||||||||||| || |||||| ||||| ||||| |||||||| | ||    
T  38363318 gtcattatagtaaaagtatagtttattgcatcaaaattagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaattgtgacaattaaaaaggaa 38363417  T
Q  105 cggatgtagtat 116  Q
    || | |||||||    
T  38363418 cgaaggtagtat 38363429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9076196 - 9076294
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||| || |||||| ||||| | ||| ||||||||    
T  9076196 taaggtcattatagtaaaagtataatttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaattatgacaattaaaa 9076294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 25344085 - 25344199
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||| || || ||||||  |||||||||| ||||||||     
T  25344085 taaggttattatagtaaaaatatagcttattgcatcaaaagtaggatcaattgttgattgtcttgatttgtgtaaaatgacaaaatgtgacaattaaaaa 25344184  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  25344185 ggaacggaggtagta 25344199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 28024353 - 28024240
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||  |||| ||||||||||||||| || |||||| ||||||| ||| ||||||||     
T  28024353 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtaataattattgattgtcttggttggtgtaaaatgtcaaaatatgacaattaaaaa 28024254  T
Q  101 gaaacggatgtagt 114  Q
    | |||||| |||||    
T  28024253 ggaacggaggtagt 28024240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 12664983 - 12665090
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||| | | |||| ||| ||||||||||||||||||||||||||||||||  | |||||| ||||||| ||| ||||||||     
T  12664983 taaggtcattatagtaaaagtacatcatattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatatgacaattaaaaa 12665082  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  12665083 ggaacgga 12665090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 4985269 - 4985155
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||| |||| |||||| ||| |||||||||| ||| | ||||||||||||||  || |||||| ||||||||||| ||||||||     
T  4985269 taaggtcattatagtaaaaatataacttattgcatcaaaagtagtaacaactattgattgtcttggtatgtgtaaaatgtcaaaatgtgacaattaaaaa 4985170  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  4985169 ggaacggaggtagta 4985155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24074932 - 24074834
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||| ||||||||||||||||||| |||||| ||| |||||||||| ||||| |||||||| |||||| || |||||| ||||||||||| ||||||||    
T  24074932 taagttcattatagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgttttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 24074834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 40198913 - 40199011
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| |||||||||||||||||| |  || ||||||||||||| || | ||||||||    
T  40198913 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaattgttgattgtcttgatctgtgtaaaatatcaaaaagtaacaattaaaa 40199011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 28447079 - 28446962
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| ||||||  || |||| ||||| ||||| |||||| |||||||| || |||||| |||||| |||| ||||||||     
T  28447079 taaggtcattatagtaaaagtataacttattgtatcaaaaatagtaacaattattgattatcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaa 28446980  T
Q  101 gaaacggatgtagtatta 118  Q
    ||||||||  ||||||||    
T  28446979 gaaacggagatagtatta 28446962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1297832 - 1297733
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacat-taaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||||||||||||||| |||  |||| |||||| |||||||||||||||| |||  |||||||| ||||||||| | ||||||||    
T  1297832 taaggtcattatagtaaaagtatagcttattgcatcaaaaaatagtattaattgttgattgtcttagtttatataaaatgtcaaaatgtaacaattaaaa 1297733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 31546091 - 31546004
Alignment:
Q  3 aggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtga 90  Q
    |||||||| ||||||||||||| |||||| ||| |||||||||| ||||| ||||||||||||||| || |||||| |||||| ||||    
T  31546091 aggtcattgtagtaaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatgtcaaaaggtga 31546004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 4427498 - 4427380
Alignment:
Q  3 aggtcattatagtaaaagtatagcttattacattaaaagtagta-tcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatg 101  Q
    |||||||||||||||||||||| ||||||  || |||||||| | | ||||  ||||||||||| ||||| ||||||||||||| |||| |||||||| |    
T  4427498 aggtcattatagtaaaagtataacttattgtatcaaaagtagcaataaattactgattgtcttgattcgtgtaaaatatcaaaaagtgacaattaaaaag 4427399  T
Q  102 aaacggatgtagtattaat 120  Q
     |||||| |||||| ||||    
T  4427398 gaacggaggtagtactaat 4427380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 14793884 - 14793786
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||| ||| |||| |||||  |||| |||||| | |||||| || |||||| ||||||||||| ||||||||    
T  14793884 taaggtcattatagtaaaagtataacttattgcatcaaaaatagtaataattattgattatattggtttgtgtaaaatgtcaaaatgtgacaattaaaa 14793786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36239583 - 36239681
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||||| |||| |||||| ||| |||||||||| ||| | |||||||||||| |  || |||||| ||||||||||| ||||||||    
T  36239583 taaggtcattatagtaaaaatataacttattgcatcaaaagtagtaacaactattgattgtcttgatatgtgtaaaatgtcaaaatgtgacaattaaaa 36239681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2134000 - 2133904
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||| ||| |||| ||||| ||||| |||||||||||||||  | |||||| ||||||  ||||||||||||    
T  2134000 taaggtcattatagtaaaagtataacttattgcatcaaaa-tagtaacaattattgattgtcttggtttatgtaaaatgtcaaaa-atgataattaaaa 2133904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 4694890 - 4694956
Alignment:
Q  2 aaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggtt 68  Q
    ||||||||||||||||||||||| |||||||||| ||||||| || ||||| |||||| ||||||||    
T  4694890 aaggtcattatagtaaaagtataacttattacatcaaaagtattagcaattattgattatcttggtt 4694956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4017539 - 4017655
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| ||||||||||||| ||| |||||| ||| |||||||  | ||||| |||||| ||||| || || |||||| |||||| |||| ||||||||     
T  4017539 taaggttattatagtaaaagaataacttattgcatcaaaagtaaaaacaattattgattatcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaa 4017638  T
Q  101 gaaacggatgtagtatt 117  Q
    | || ||||||||||||    
T  4017639 ggaatggatgtagtatt 4017655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16124354 - 16124238
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||| || | |||||| ||| |||||||||| ||||  |||| | | ||||||  | |||||| ||||||||||| ||||||||     
T  16124354 taaggtcattatagtaaaaatacaacttattgcatcaaaagtagtaacaatcattgactatattggtttatgtaaaatgtcaaaatgtgacaattaaaaa 16124255  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  16124254 ggaacggaggtagtatt 16124238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 38502896 - 38502784
Alignment:
Q  3 aggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatga 102  Q
    |||||||||||||||||||| | |||||||||| |||||||||| ||||  |||| | | |||||| || |||||| | ||||||| | |||||||| ||    
T  38502896 aggtcattatagtaaaagtacaacttattacatcaaaagtagtaacaatcattgactattttggtttgtgtaaaatgttaaaatgtaacaattaaaaaga 38502797  T
Q  103 aacggatgtagta 115  Q
    ||| || ||||||    
T  38502796 aacagaggtagta 38502784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 5119303 - 5119410
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| ||||||||||||||||| |||||| ||| |||||||| | ||||| |||||||| ||  || ||||||||||| ||||  ||| ||||||||     
T  5119303 taaggttattatagtaaaagtataacttattgcatcaaaagtagaaacaattattgattgtattaatttgtataaaatattaaaaaatgacaattaaaaa 5119402  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  5119403 ggaacgga 5119410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 18437417 - 18437298
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||||||||   ||||  || |||| | ||| || || |||||||| |||||| || ||||||||||||| |||| ||||||||     
T  18437417 taaggttattatagtaaaagtataaagtattgtatcaaaaatggtaacatttattgattgtattggtttgtgtaaaatatcaaaaagtgacaattaaaaa 18437318  T
Q  101 gaaacggatgtagtattaat 120  Q
    | |||||| |||||||||||    
T  18437317 ggaacggaggtagtattaat 18437298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 10889242 - 10889168
Alignment:
Q  41 gtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagta 115  Q
    |||| |||||||||||||||||||||||  | |||||| | ||||||||| |||||||| |||||||| ||||||    
T  10889242 gtaggatcaattgttgattgtcttggtttatgtaaaatgttaaaatgtgacaattaaaaagaaacggaggtagta 10889168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 28463479 - 28463362
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||||||||  |||||  || | ||  |||| || || |||| |||||||||| || ||||||||||||| | |||| ||||||     
T  28463479 taaggttattatagtaaaagtataaattattgtataagaaaaagtaacatttattgagtgtcttggtttgtgtaaaatatcaaaaagcgatagttaaaaa 28463380  T
Q  101 gaaacggatgtagtatta 118  Q
    |||||||| |||||||||    
T  28463379 gaaacggaggtagtatta 28463362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8229897 - 8229834
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtctt 64  Q
    |||||||| ||||||||||||||| |||||| ||| ||||||| || ||||| |||||||||||    
T  8229897 taaggtcactatagtaaaagtataacttattgcatcaaaagtattaacaattattgattgtctt 8229834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9127445 - 9127330
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||| | |||||| ||| ||||||  || ||||  |||| | | ||||||  | |||||| ||||||||||| ||||||||     
T  9127445 taaggtcattatagtaaaagtacaacttattgcatcaaaagtgataacaatcattgactattttggtttatgtaaaatgtcaaaatgtgacaattaaaaa 9127346  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  9127345 ggaacggaggtagtat 9127330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 25027662 - 25027555
Alignment:
Q  8 attatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgg 107  Q
    ||||||||||||||||   |||||  || |||||||||| || || ||||||||||| |||  | |||||| ||| || |||| |||||||| |||||||    
T  25027662 attatagtaaaagtatcaattattgtatcaaaagtagtaacatttattgattgtcttagtttatgtaaaatgtcacaaagtgacaattaaaaagaaacgg 25027563  T
Q  108 atgtagta 115  Q
    ||||||||    
T  25027562 atgtagta 25027555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 5843051 - 5842973
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagta 115  Q
    |||||||||| || || |||||||||||||||  | |||||| |||||| ||||||||||||| | ||||||| |||||    
T  5843051 aaaagtagtaacatttattgattgtcttggtttatgtaaaatgtcaaaaagtgataattaaaaaggaacggatatagta 5842973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 37809889 - 37809982
Alignment:
Q  6 tcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||| |    ||| ||| |||||||||| || || || |||||||||||| || ||||||||||||| |||| ||||||||    
T  37809889 tcattatagtaaaagtaaaaacaattgcatcaaaagtagtaacatttattaattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaa 37809982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3686815 - 3686931
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||| || |  |||||  || |||||||| | || || |||||||| ||||||  |||||||  ||||||||||||||||||||     
T  3686815 taaggttattatagtaaaaatagaaattattgtatcaaaagtagcaacatttattgattgttttggtttatataaaacgtcaaaatgtgataattaaaaa 3686914  T
Q  101 gaaacggatgtagtatt 117  Q
     ||| ||| ||||||||    
T  3686915 taaatggaggtagtatt 3686931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 6008045 - 6008124
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatc-aaaatgtgataattaaaatgaaacggatgtagta 115  Q
    |||||||||| ||||| |||||||| |||||| || ||||||||| |||| |||| |||||||| | |||||| ||||||    
T  6008045 aaaagtagtaacaattattgattgtattggtttgtgtaaaatatcaaaaaagtgacaattaaaaaggaacggaggtagta 6008124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 6689724 - 6689835
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||| ||||||||||||||||||||||||||  || |||| ||||| ||||| || ||||| ||| || || |||||| | ||||  | | ||||||||     
T  6689724 taagatcattatagtaaaagtatagcttattgtatcaaaaatagtaacaattattaattgttttgatttgtgtaaaatgtaaaaaaataacaattaaaaa 6689823  T
Q  101 gaaacggatgta 112  Q
    | ||||||||||    
T  6689824 ggaacggatgta 6689835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 12784501 - 12784439
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||| || || ||||||||||||||| || |||||| |||||| |||| ||||||||    
T  12784501 aaaagtagtaacatttattgattgtcttggtttgtgtaaaatgtcaaaaagtgagaattaaaa 12784439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 37633837 - 37633899
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||| || || || |||||||||||| || ||||||||||||| |||| ||||||||    
T  37633837 aaaagtagtaacatttattaattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaa 37633899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 29497634 - 29497527
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||| ||||| || |||||| ||||||||||||||||||||     
T  29497634 taaggtcattatagtaaaagtatagcttatggcataaaaagtagtatcaattgttgattgtcctggtttgtgtaaaatgtcaaaatgtgataattaaaaa 29497535  T
Q  101 gaaacgga 108  Q
    ||||||||    
T  29497534 gaaacgga 29497527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 33099935 - 33099820
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||     
T  33099935 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaa 33099836  T
Q  101 gaaacggatgtagtat 116  Q
      |||||| |||||||    
T  33099835 agaacggaggtagtat 33099820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 8381969 - 8382083
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||| || |||||| ||||||||||||||||||||     
T  8381969 taaggtcattatagtaaaagtatatcttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataattaaaaa 8382068  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  8382069 ggaacggaggtagta 8382083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 7312760 - 7312855
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataatta 96  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| || || |||||||||||||||||| |||||    
T  7312760 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatatcaaaatgtgacaatta 7312855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31430702 - 31430800
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||| |||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||    
T  31430702 taaggttattatagtaaaagtatagcttattgcatgaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 31430800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41891413 - 41891511
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||    
T  41891413 taaggtcattatagtaaaagtataacttattgcatcaaaattagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 41891511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18470450 - 18470548
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |  |||||||| |||||| || ||||||||    
T  18470450 taaggtcgttatagtaaaagtatagcttattgcataaaaagtagtatcaattgttgattgtcttggtttgcgtaaaatattaaaatgcgacaattaaaa 18470548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 32528428 - 32528330
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||| |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||| || ||||||||| ||||||| ||| ||||||||    
T  32528428 taagatcattatagtaaaagtatagcttattgcatcaaaagtagcatcaattgttgattgtcttgatttgtataaaatgtcaaaatatgacaattaaaa 32528330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 32966149 - 32966033
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||  || || |||||| | ||||||||| ||||||||     
T  32966149 taaggtcattatagtaaaagtatagcttattgcatcaaaagtggtatcaattgttgattgtcttaatttgtgtaaaatgttaaaatgtgacaattaaaaa 32966050  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||| ||||    
T  32966049 ggaacggaggtaatatt 32966033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8265092 - 8265190
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||| |||||||||||| ||||| ||||| ||| ||||| |||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||    
T  8265092 taaggttattatagtaaaaatatagtttattgcatcaaaaggagtatcaattgttgattgtcttggtttgtgtaaaatttcaaaatgtgacaattaaaa 8265190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12838178 - 12838080
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||| ||||||||||| ||||||||||||  || ||||||| |||||||| ||||||||||||||| || |||||||||||||||||| ||||||||    
T  12838178 taaggttattatagtaaaggtatagcttattgtatcaaaagtaatatcaatttttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaa 12838080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 44480242 - 44480156
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatg 87  Q
    ||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||| || |||||| ||||||||    
T  44480242 taaggtcattatagtaaaaatatagcttattgcataaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatg 44480156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 29722401 - 29722310
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataatta 96  Q
    |||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||| |  |||||| | ||||||||| |||||    
T  29722401 gtcattatagtaaaagtataacttattgcatcaaaagtagtatcgattgttgattgtcttggtttgcgtaaaatgttaaaatgtgacaatta 29722310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31399032 - 31398925
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||||||||| |||||| || |||||||||||||||| || ||||||||||||  | ||||||   ||||||||| ||||||||     
T  31399032 taaggtcattatagtaaaagtatagtttattatatcaaaagtagtatcaatttttaattgtcttggtttatgtaaaatgctaaaatgtgacaattaaaaa 31398933  T
Q  101 gaaacgga 108  Q
    | ||||||    
T  31398932 gcaacgga 31398925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 20035191 - 20035255
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttg 65  Q
    |||| |||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  20035191 taagatcattatagtaaaagtatagcttattgcattaaaaggaatatcaattgttgattgtcttg 20035255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 20045602 - 20045666
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttg 65  Q
    |||| |||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  20045602 taagatcattatagtaaaagtatagcttattgcattaaaaggaatatcaattgttgattgtcttg 20045666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 26724067 - 26724175
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatc-aaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||  |||  ||||||||||||||| || |||||| || ||||||||| ||||||||    
T  26724067 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtaataatcattgattgtcttggtttgtgtaaaatgtcaaaaatgtgacaattaaaa 26724166  T
Q  100 tgaaacgga 108  Q
     | ||||||    
T  26724167 aggaacgga 26724175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 36922382 - 36922490
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaa-gtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||  |||||||||| ||| |||| ||| ||||||||||||||||||||| ||  | |||||| ||||||||||| ||||||||    
T  36922382 taaggtcattatagtaaaaacatagcttattgcatcaaaaagtaatatcaattgttgattgtcttgatttatttaaaatgtcaaaatgtgacaattaaaa 36922481  T
Q  100 tgaaacgga 108  Q
     | ||||||    
T  36922482 aggaacgga 36922490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38168889 - 38168773
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaa-ttgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||| |||||||||| |||||| ||| |||| ||||| ||| ||  |||||||||||||| || |||||||| |||| |||| ||||||||    
T  38168889 taaggtcattataataaaagtataacttattgcatcaaaaatagtaacaaattaatgattgtcttggtttgtgtaaaatattaaaaagtgacaattaaaa 38168790  T
Q  100 tgaaacggatgtagtat 116  Q
     |||||||| |||||||    
T  38168789 agaaacggaggtagtat 38168773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 5732173 - 5732058
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||| | |||||| ||| |||||||||| ||||  |||| | ||||||||  | |||||| ||||||||||| ||||||||     
T  5732173 taaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaaatgtgacaattaaaaa 5732074  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  5732073 ggaacggaggtagtat 5732058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10227399 - 10227514
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| |||||||| |  |||| |||||||||||| || || |||||| | |||| |||| ||||||||     
T  10227399 taaggtcattatagtaaaagtataacttattgcatcaaaagtagaaataattattgattgtcttgatttgtgtaaaatgttaaaaagtgacaattaaaaa 10227498  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  10227499 ggaacggaggtagtat 10227514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 17896555 - 17896476
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagtat 116  Q
    ||||||||||||||||||||||||||||| || || |||||| ||||||||||| |||||||| | |||||| |||||||    
T  17896555 aaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtat 17896476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 22950914 - 22950820
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||| |||||||||||||||||  || |||||||||||||||| || |||||||||||| || |||||| ||||||| | | ||||||||    
T  22950914 gtcattataataaaagtatagcttattgtatcaaaagtagtatcaattttttattgtcttggtttgtgtaaaatgtcaaaatataacaattaaaa 22950820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 36298270 - 36298176
Alignment:
Q  5 gtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||| |||| |||||| ||| |||||||||| ||||| |||||||| ||| || || |||||| ||||||||||| ||||||||    
T  36298270 gtcattatagtaaaaatataacttattgcatcaaaagtagtaacaattattgattgttttgatttgtgtaaaatgtcaaaatgtgacaattaaaa 36298176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 41675286 - 41675189
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||| ||||||||||| ||||||||||| ||| |||| ||| ||||||| |||||||||||||||  | |||||| ||||||||||| ||||||||    
T  41675286 taaggtcgttatagtaaaactatagcttattgcatcaaaaatag-atcaattattgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaa 41675189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 47408256 - 47408372
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||||||||  |||||  || |||||||||| || || |||| |||||||||| || |||||| |||||| |||| ||||||||     
T  47408256 taaggttattatagtaaaagtatatattattgtatcaaaagtagtaacatttattgaatgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaa 47408355  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  47408356 ggaacggaggtagtatt 47408372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 7477298 - 7477191
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| ||||  |||| | |||| |||  | |||||| ||||||||| | ||||||||     
T  7477298 taaggtcattatagtaaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttagtttatgtaaaatgtcaaaatgtaacaattaaaaa 7477199  T
Q  101 gaaacgga 108  Q
    ||||||||    
T  7477198 gaaacgga 7477191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3838005 - 3838103
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    |||||||||||||||||||||||| |||||  ||| ||||||| || ||||| |||||||||||| || |  |||||| |||||| |||| ||||||||    
T  3838005 taaggtcattatagtaaaagtataacttatggcatcaaaagtaataacaattattgattgtcttgatttgcgtaaaatgtcaaaaagtgacaattaaaa 3838103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 42841930 - 42841852
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagta 115  Q
    |||||||||| || || ||||||||||||||| || ||||||||||||| |||| |||||||| | |||||||||||||    
T  42841930 aaaagtagtaacatttattgattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaacggatgtagta 42841852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26632280 - 26632215
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttgg 66  Q
    ||||||||||||||||||||||||||||||| ||| |||| |||||||| |||||  |||||||||    
T  26632280 taaggtcattatagtaaaagtatagcttattgcatcaaaaatagtatcatttgttatttgtcttgg 26632215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17896623 - 17896569
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgtt 55  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||| |||||||||||    
T  17896623 taaggtcattatagtaaaaatatagcttattgcatcaaaagtaatatcaattgtt 17896569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 33921874 - 33921758
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||| ||||  ||||| ||| |||||||||| ||||  |||| | |||| |||  | |||||| | ||||||||| ||||||||     
T  33921874 taaggtcattatagtaaaaatataatttattgcatcaaaagtagtaacaatcattgactatcttagtttatgtaaaatgttaaaatgtgacaattaaaaa 33921775  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  33921774 ggaacggaggtagtatt 33921758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 28608737 - 28608856
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||| || |  |||||  || |||||||| | || || |||||||||||| || || |||||||||||||| ||| ||||||||     
T  28608737 taaggttattatagtaaaaataaaaattattgtatcaaaagtagcaacatttattgattgtcttgatttgtgtaaaatatcaaaatatgacaattaaaaa 28608836  T
Q  101 gaaacggatgtagtattaat 120  Q
    | ||| ||||||||| ||||    
T  28608837 ggaacagatgtagtaataat 28608856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 18194278 - 18194200
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagta 115  Q
    ||||||||||||| || ||||||||||||||| || |||||| | ||||  ||| |||||||| | |||||||||||||    
T  18194278 aaaagtagtatcatttattgattgtcttggtttgtgtaaaatttgaaaaactgacaattaaaaaggaacggatgtagta 18194200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 36648104 - 36648028
Alignment:
Q  2 aaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaat 78  Q
    ||||||||||||||||||| ||| |||||| ||| |||||||  |  |||| ||||||||||||||| || ||||||    
T  36648104 aaggtcattatagtaaaagcataacttattgcatcaaaagtaaaaataattattgattgtcttggtttgtgtaaaat 36648028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 33173950 - 33174064
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||| |||||||| |||||||| | ||||||  || |||||||||| ||||  |||| | | ||||||  | |||||| ||||||||||| ||||||||     
T  33173950 taagatcattatattaaaagtacaacttattgtatcaaaagtagtaacaatcattgactattttggtttatgtaaaatgtcaaaatgtgacaattaaaaa 33174049  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  33174050 ggaacggaggtagta 33174064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 37353970 - 37353888
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaa 83  Q
    ||||||||||||||||||| | || |||||| ||| | |||||||| ||||| |||||||| ||| ||| | |||||| ||||    
T  37353970 taaggtcattatagtaaaaatgtaacttattgcatcagaagtagtaacaattattgattgttttgattcatgtaaaatgtcaa 37353888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 42881118 - 42881176
Alignment:
Q  27 ttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaa 85  Q
    ||||| ||| ||||||||||  |||| || |||||||||||| ||||||||||||||||    
T  42881118 ttattgcatcaaaagtagtaaaaattattaattgtcttggtttgtataaaatatcaaaa 42881176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 44820671 - 44820609
Alignment:
Q  37 aaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||  |||| ||||||||||||||| ||||||||| ||||||| ||| | ||||||    
T  44820671 aaaagtagtaataattattgattgtcttggtttgtataaaatgtcaaaatatgacagttaaaa 44820609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 49289 - 49406
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||||||| |  |||||| ||||||||||| ||||||||     
T  49289 taaggtcattataataaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttggtttgcgtaaaatgtcaaaatgtgacaattaaaaa 49388  T
Q  101 gaaacggatgtagtatta 118  Q
    | ||||||||||||||||    
T  49389 ggaacggatgtagtatta 49406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 89360 - 89429
Alignment:
Q  48 caattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagtatt 117  Q
    |||||||||||||||||| || || |||||| ||||||||||| ||||||||   |||| ||||||||||    
T  89360 caattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacgaatgtagtatt 89429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8297 - 8413
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||| ||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||     
T  8297 taagatcattatagtaaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 8396  T
Q  101 gaaacggatgtagtatt 117  Q
    | |||||| ||||||||    
T  8397 ggaacggaggtagtatt 8413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 69243 - 69357
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||| |||||||||||||||||||||||||| ||| |||| |||||| |||||||||||||||||||| || |||||| ||||||||||| |||| |||     
T  69243 taagttcattatagtaaaagtatagcttattgcatcaaaaatagtat-aattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattgaaaa 69341  T
Q  101 gaaacggatgtagtat 116  Q
    | |||||| |||||||    
T  69342 ggaacggaggtagtat 69357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26225 - 26127
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||  | |||||| ||||||| ||| ||||||||    
T  26225 taaggtcattataataaaagtatagcttattgcatcaaaagtaatatcaattgttgattgtcttggtttatgtaaaatgtcaaaatatgacaattaaaa 26127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 77231 - 77345
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| || || |||||| | ||||||||| |||||| |     
T  77231 taaggttattatagtaaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgttaaaatgtgacaattaagaa 77330  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  77331 ggaacggaggtagta 77345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 148446 - 148565
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||||||| || ||||||||||||  | |||||| ||||||| | | ||||||||     
T  148446 taaggtcattatagtaaaagtataacttattatatcaaaagtagtatcaattttttattgtcttggtttatgtaaaatgtcaaaatataacaattaaaaa 148545  T
Q  101 gaaacggatgtagtattaat 120  Q
    | |||||| |||||| ||||    
T  148546 ggaacggaggtagtaataat 148565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 138795 - 138727
Alignment:
Q  46 atcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgtagt 114  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||| |||||||| | ||||||||||||    
T  138795 atcaattgttgattgtcttggtttgtataaaatgtaaaaatgtgacaattaaaaaggaacggatgtagt 138727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4658 - 4770
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    ||||||||||||||||||| |||| |||||| ||| |||||||||| ||||| |||||||||||||||  | ||||||| | |||||||| ||||||||     
T  4658 taaggtcattatagtaaaaatataacttattgcatcaaaagtagtaacaattattgattgtcttggtttatgtaaaata-ccaaatgtgacaattaaaaa 4756  T
Q  101 gaaacggatgtagt 114  Q
    | |||||| |||||    
T  4757 ggaacggaggtagt 4770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 195677 - 195587
Alignment:
Q  9 ttatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaa 99  Q
    ||||||||||||||||| |||||  || |||  ||||||||||||| |||| |||||||| || |||||| ||||||||||| ||||||||    
T  195677 ttatagtaaaagtatagtttattgtatcaaacatagtatcaattgtcgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaa 195587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 2950 - 3035
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatc-aattgttgattgtcttggttcgtataaaatatcaaaa 85  Q
    ||||||||||||| |||||||||| |||||| ||| |||||||||| | ||||  |||||||||||||| || |||||||| ||||    
T  2950 taaggtcattataataaaagtataacttattgcatcaaaagtagtaacaaattactgattgtcttggtttgtgtaaaatataaaaa 3035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 91867 - 91924
Alignment:
Q  55 tgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacggatgta 112  Q
    |||||||||||||| || |||||| | |||||||||||||||||||| ||||||||||    
T  91867 tgattgtcttggtttgtttaaaatgttaaaatgtgataattaaaatggaacggatgta 91924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1213 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 65 - 1
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttg 65  Q
    |||||||||||||||||||||| | |||||| ||| ||||||||||  |||| ||||||||||||    
T  65 taaggtcattatagtaaaagtacaacttattgcatcaaaagtagtaataattattgattgtcttg 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0274 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 337 - 224
Alignment:
Q  1 taaggtcattatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaat 100  Q
    |||||| |||||||||||| ||||  || ||  || |||||||||| || |  |||| |||||||||| ||||||||||||||||  ||||||||||||     
T  337 taaggttattatagtaaaaatatacattgttgtatcaaaagtagtaacattcattgaatgtcttggtttgtataaaatatcaaaa-atgataattaaaaa 239  T
Q  101 gaaacggatgtagta 115  Q
    | |||||| ||||||    
T  238 ggaacggaggtagta 224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 419583 - 419476
Alignment:
Q  8 attatagtaaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggttcgtataaaatatcaaaatgtgataattaaaatgaaacgg 107  Q
    ||||||||||||||||   |||||  || |||||||||| || || |||||||||||||||  | |||||| ||| || |||| |||||||| ||||| |    
T  419583 attatagtaaaagtatcaattattgtatcaaaagtagtaacatttattgattgtcttggtttatgtaaaatgtcacaaagtgacaattaaaaagaaacag 419484  T
Q  108 atgtagta 115  Q
    | ||||||    
T  419483 aggtagta 419476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 3505 times since January 2019
Visitors: 6174