View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0834_low_15 (Length: 400)

Name: NF0834_low_15
Description: NF0834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0834_low_15
NF0834_low_15
[»] chr6 (48 HSPs)
chr6 (1-312)||(31965692-31966004)
chr6 (43-296)||(20222595-20222836)
chr6 (43-296)||(22116579-22116820)
chr6 (196-312)||(20222155-20222272)
chr6 (196-312)||(22116139-22116256)
chr6 (176-309)||(15471419-15471552)
chr6 (188-309)||(20463966-20464088)
chr6 (176-309)||(15161854-15161987)
chr6 (176-309)||(15171861-15171994)
chr6 (193-309)||(12658263-12658380)
chr6 (193-309)||(12660755-12660872)
chr6 (193-299)||(23574947-23575055)
chr6 (193-309)||(13217592-13217709)
chr6 (229-309)||(23348509-23348590)
chr6 (194-309)||(23517623-23517740)
chr6 (194-309)||(17794232-17794348)
chr6 (43-170)||(20222273-20222400)
chr6 (43-170)||(22116257-22116384)
chr6 (195-298)||(18973316-18973420)
chr6 (43-131)||(20221042-20221130)
chr6 (43-131)||(22115026-22115114)
chr6 (194-309)||(29253626-29253742)
chr6 (194-300)||(25031508-25031615)
chr6 (247-309)||(29093232-29093294)
chr6 (229-309)||(3923344-3923425)
chr6 (189-235)||(13168047-13168093)
chr6 (197-309)||(5949973-5950086)
chr6 (193-309)||(18234111-18234228)
chr6 (195-298)||(24393210-24393315)
chr6 (193-292)||(25948975-25949076)
chr6 (193-312)||(25963555-25963676)
chr6 (193-312)||(25968202-25968323)
chr6 (193-264)||(17739358-17739430)
chr6 (193-300)||(26138363-26138471)
chr6 (229-300)||(24545948-24546019)
chr6 (253-307)||(32797029-32797084)
chr6 (235-309)||(18627101-18627175)
chr6 (229-291)||(25606633-25606695)
chr6 (193-300)||(26017608-26017717)
chr6 (193-300)||(26156981-26157090)
chr6 (251-309)||(28221873-28221931)
chr6 (229-266)||(1122856-1122893)
chr6 (212-300)||(25507293-25507382)
chr6 (193-300)||(18399925-18400033)
chr6 (229-300)||(19993277-19993349)
chr6 (229-309)||(25923723-25923803)
chr6 (212-312)||(27566115-27566215)
chr6 (1-33)||(30245144-30245176)
[»] chr7 (39 HSPs)
chr7 (1-312)||(38877018-38877348)
chr7 (186-312)||(15522659-15522786)
chr7 (186-309)||(680259-680383)
chr7 (192-309)||(30064283-30064401)
chr7 (194-309)||(17911263-17911379)
chr7 (195-309)||(4467305-4467420)
chr7 (245-309)||(3194915-3194980)
chr7 (194-309)||(4983420-4983536)
chr7 (212-309)||(4540882-4540980)
chr7 (193-312)||(649103-649224)
chr7 (193-300)||(4461034-4461142)
chr7 (193-300)||(11484153-11484261)
chr7 (229-300)||(5825736-5825807)
chr7 (215-309)||(16897626-16897721)
chr7 (193-309)||(1462207-1462324)
chr7 (211-312)||(4312870-4312972)
chr7 (215-312)||(15707580-15707678)
chr7 (193-286)||(21005795-21005889)
chr7 (215-300)||(46274037-46274123)
chr7 (194-235)||(6712829-6712870)
chr7 (193-312)||(9192454-9192575)
chr7 (193-312)||(16463542-16463663)
chr7 (193-309)||(19515697-19515814)
chr7 (193-312)||(33612585-33612706)
chr7 (193-312)||(48355906-48356027)
chr7 (194-309)||(9194327-9194443)
chr7 (194-312)||(10204321-10204441)
chr7 (229-312)||(14942082-14942166)
chr7 (229-312)||(15369675-15369759)
chr7 (194-292)||(9004285-9004384)
chr7 (235-309)||(21062957-21063031)
chr7 (194-299)||(48713121-48713227)
chr7 (229-266)||(545448-545485)
chr7 (229-266)||(23203518-23203555)
chr7 (229-266)||(23509645-23509682)
chr7 (229-266)||(23515427-23515464)
chr7 (229-266)||(41113162-41113199)
chr7 (247-302)||(6712922-6712978)
chr7 (193-311)||(8880322-8880442)
[»] chr5 (21 HSPs)
chr5 (161-309)||(24164672-24164820)
chr5 (187-312)||(23029927-23030052)
chr5 (193-309)||(16676770-16676887)
chr5 (229-309)||(22170457-22170538)
chr5 (193-312)||(20967400-20967521)
chr5 (39-91)||(23029759-23029811)
chr5 (193-309)||(2953823-2953940)
chr5 (194-309)||(25486018-25486134)
chr5 (229-300)||(31414324-31414396)
chr5 (229-309)||(31758458-31758538)
chr5 (229-292)||(3387720-3387783)
chr5 (247-309)||(23110379-23110442)
chr5 (230-312)||(23343897-23343980)
chr5 (229-309)||(12410199-12410280)
chr5 (229-266)||(20444658-20444695)
chr5 (229-266)||(20450139-20450176)
chr5 (229-266)||(24214474-24214511)
chr5 (229-266)||(41766065-41766102)
chr5 (229-312)||(15059085-15059169)
chr5 (193-292)||(20104263-20104363)
chr5 (229-300)||(24143541-24143613)
[»] chr4 (28 HSPs)
chr4 (176-309)||(16212625-16212759)
chr4 (1-312)||(23793739-23794072)
chr4 (194-300)||(22181326-22181433)
chr4 (194-299)||(5513937-5514043)
chr4 (176-312)||(5675099-5675236)
chr4 (188-300)||(33331346-33331459)
chr4 (194-300)||(11922718-11922825)
chr4 (229-309)||(9488704-9488785)
chr4 (193-309)||(38651829-38651946)
chr4 (194-312)||(24125538-24125658)
chr4 (193-292)||(11902942-11903043)
chr4 (193-312)||(45234013-45234134)
chr4 (247-302)||(12346922-12346978)
chr4 (229-309)||(17484729-17484809)
chr4 (229-309)||(21515696-21515776)
chr4 (254-309)||(12346308-12346363)
chr4 (229-292)||(18241925-18241988)
chr4 (247-309)||(3772577-3772639)
chr4 (3-33)||(9857109-9857139)
chr4 (229-266)||(10631110-10631147)
chr4 (229-266)||(10821740-10821777)
chr4 (229-266)||(20617905-20617942)
chr4 (247-312)||(45244643-45244708)
chr4 (207-266)||(11889334-11889394)
chr4 (229-312)||(13621971-13622055)
chr4 (3-35)||(16954057-16954089)
chr4 (212-312)||(36654626-36654726)
chr4 (212-312)||(55798054-55798154)
[»] chr2 (23 HSPs)
chr2 (1-309)||(24371583-24371911)
chr2 (194-300)||(25337444-25337551)
chr2 (195-309)||(23257364-23257479)
chr2 (194-300)||(24321485-24321592)
chr2 (247-309)||(19124665-19124728)
chr2 (235-309)||(20851894-20851969)
chr2 (247-302)||(15027019-15027075)
chr2 (194-309)||(23140299-23140415)
chr2 (194-309)||(23552089-23552205)
chr2 (247-300)||(19013365-19013419)
chr2 (194-243)||(19124580-19124629)
chr2 (229-309)||(41653943-41654024)
chr2 (193-292)||(15583472-15583572)
chr2 (194-309)||(44997868-44997984)
chr2 (229-311)||(20281684-20281767)
chr2 (207-309)||(25858978-25859081)
chr2 (207-309)||(29568823-29568926)
chr2 (186-232)||(15027129-15027175)
chr2 (212-309)||(21344803-21344901)
chr2 (215-312)||(32441743-32441841)
chr2 (193-312)||(24506963-24507084)
chr2 (244-312)||(16134561-16134629)
chr2 (229-309)||(25043443-25043523)
[»] chr8 (13 HSPs)
chr8 (191-312)||(24221903-24222025)
chr8 (193-309)||(24341738-24341855)
chr8 (1-189)||(24221694-24221880)
chr8 (247-308)||(31470171-31470232)
chr8 (229-309)||(14162483-14162563)
chr8 (212-300)||(18007790-18007879)
chr8 (197-312)||(14351957-14352073)
chr8 (194-309)||(10070-10186)
chr8 (194-309)||(24966918-24967034)
chr8 (188-243)||(31470072-31470127)
chr8 (250-300)||(23222353-23222403)
chr8 (247-311)||(18161653-18161717)
chr8 (229-309)||(20263082-20263162)
[»] scaffold0014 (2 HSPs)
scaffold0014 (192-312)||(167788-167909)
scaffold0014 (1-33)||(191303-191335)
[»] chr1 (24 HSPs)
chr1 (176-309)||(26191892-26192026)
chr1 (193-299)||(16382368-16382475)
chr1 (197-309)||(16385230-16385343)
chr1 (188-300)||(20861094-20861207)
chr1 (194-300)||(30819358-30819465)
chr1 (176-300)||(23298519-23298644)
chr1 (247-309)||(15347453-15347516)
chr1 (193-309)||(25405298-25405415)
chr1 (194-309)||(16148749-16148865)
chr1 (229-300)||(13799786-13799857)
chr1 (247-309)||(20899735-20899798)
chr1 (189-243)||(21918546-21918600)
chr1 (194-309)||(20411892-20412008)
chr1 (247-302)||(21918446-21918502)
chr1 (193-311)||(48255943-48256063)
chr1 (247-309)||(28764221-28764283)
chr1 (193-292)||(44537914-44538015)
chr1 (194-312)||(16431198-16431318)
chr1 (194-312)||(17716382-17716502)
chr1 (197-264)||(39286905-39286973)
chr1 (194-312)||(52236189-52236309)
chr1 (188-243)||(2977548-2977603)
chr1 (194-262)||(8648545-8648614)
chr1 (229-266)||(38045069-38045106)
[»] chr3 (27 HSPs)
chr3 (188-309)||(41546080-41546202)
chr3 (176-309)||(16703455-16703589)
chr3 (194-309)||(8531594-8531710)
chr3 (194-291)||(11870135-11870233)
chr3 (212-309)||(8686208-8686306)
chr3 (193-312)||(14495133-14495254)
chr3 (194-312)||(3250394-3250514)
chr3 (194-285)||(13601402-13601494)
chr3 (194-309)||(25766030-25766146)
chr3 (229-309)||(42244883-42244963)
chr3 (211-309)||(22038569-22038668)
chr3 (247-309)||(27993182-27993245)
chr3 (193-309)||(14661101-14661219)
chr3 (229-309)||(17041405-17041486)
chr3 (193-309)||(34053901-34054018)
chr3 (218-309)||(19567360-19567452)
chr3 (215-312)||(3245392-3245490)
chr3 (246-308)||(14826172-14826233)
chr3 (212-309)||(17050424-17050522)
chr3 (229-266)||(3226577-3226614)
chr3 (229-266)||(4829796-4829833)
chr3 (229-309)||(7908194-7908275)
chr3 (229-266)||(12781889-12781926)
chr3 (229-266)||(24696599-24696636)
chr3 (1-34)||(27880123-27880156)
chr3 (247-292)||(40846487-40846532)
chr3 (229-309)||(14658987-14659067)
[»] scaffold1559 (1 HSPs)
scaffold1559 (194-309)||(1075-1191)
[»] scaffold0074 (1 HSPs)
scaffold0074 (176-298)||(23073-23195)
[»] scaffold0855 (3 HSPs)
scaffold0855 (247-312)||(3043-3108)
scaffold0855 (1-90)||(3325-3412)
scaffold0855 (175-243)||(3152-3220)
[»] scaffold0847 (3 HSPs)
scaffold0847 (247-312)||(3208-3273)
scaffold0847 (1-90)||(3490-3577)
scaffold0847 (175-243)||(3317-3385)
[»] scaffold0001 (1 HSPs)
scaffold0001 (237-309)||(520420-520493)
[»] scaffold0264 (1 HSPs)
scaffold0264 (207-309)||(22708-22811)
[»] scaffold0360 (1 HSPs)
scaffold0360 (193-292)||(40-141)
[»] scaffold0213 (2 HSPs)
scaffold0213 (193-312)||(26627-26748)
scaffold0213 (193-266)||(21376-21449)
[»] scaffold0471 (1 HSPs)
scaffold0471 (194-312)||(10126-10246)
[»] scaffold0123 (1 HSPs)
scaffold0123 (194-309)||(13828-13944)
[»] scaffold0098 (1 HSPs)
scaffold0098 (194-309)||(44567-44683)
[»] scaffold0035 (2 HSPs)
scaffold0035 (247-302)||(32395-32451)
scaffold0035 (253-302)||(33779-33829)
[»] scaffold0064 (1 HSPs)
scaffold0064 (195-292)||(48462-48561)
[»] scaffold0371 (1 HSPs)
scaffold0371 (193-312)||(9407-9528)
[»] scaffold0092 (1 HSPs)
scaffold0092 (194-292)||(19850-19949)
[»] scaffold0031 (2 HSPs)
scaffold0031 (229-292)||(102138-102201)
scaffold0031 (193-312)||(22916-23037)
[»] scaffold1225 (1 HSPs)
scaffold1225 (247-309)||(2003-2065)
[»] scaffold0916 (1 HSPs)
scaffold0916 (215-312)||(3142-3240)
[»] scaffold0447 (2 HSPs)
scaffold0447 (215-312)||(6092-6190)
scaffold0447 (215-312)||(10706-10804)
[»] scaffold0383 (1 HSPs)
scaffold0383 (215-312)||(8701-8799)
[»] scaffold0038 (1 HSPs)
scaffold0038 (251-309)||(22371-22429)
[»] scaffold0113 (1 HSPs)
scaffold0113 (229-266)||(46899-46936)
[»] scaffold0009 (1 HSPs)
scaffold0009 (229-266)||(238335-238372)
[»] scaffold0006 (1 HSPs)
scaffold0006 (247-312)||(28776-28841)
[»] scaffold0168 (1 HSPs)
scaffold0168 (194-309)||(9193-9309)


Alignment Details
Target: chr6 (Bit Score: 249; Significance: 1e-138; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 31965692 - 31966004
Alignment:
Q  1 aatagaatgttccacaagaaa-ccacgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagcagcaaaaggaaagcttcc 99  Q
    ||||||||||||||||| ||| ||| | |||||||||||||| ||||||||||| ||||||| |||||| ||||||| ||||||||||||||||||| ||    
T  31965692 aatagaatgttccacaacaaaaccatgggcttttatatatcagaattacactaaaaaggcatatggatcaggaagcaaaagcagcaaaaggaaagctgcc 31965791  T
Q  100 agtcgcacacgaccgtgtggctagaagcacgggccgtgcgctcctctctggttgttggccttctttgaaactttgcaggcacgggttgtgcctgatattt 199  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31965792 agtcgcacacgaccgcgtggcttgaagcacgggccgtgcgctcctctctggttgttggccttctttgaaactttgcaggcacgggttgtgcctgatattt 31965891  T
Q  200 ttgcacaagattttcatatttttggcctcaatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataa 299  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  31965892 ttgcacaagatcttcatatttttggcctcaatcaactccaaatctccttcttttgctccaagattcaatttttcatatatttgttcctgaaattaaataa 31965991  T
Q  300 caagcaattgtag 312  Q
    |||||||||||||    
T  31965992 caagcaattgtag 31966004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 43 - 296
Target Start/End: Complemental strand, 20222836 - 20222595
Alignment:
Q  43 aattacactaagaaggcatctggatcgggaagcagaagcagcaaaaggaaagcttccagtcgcacacgaccgtgtggctagaagcacgggccgtgcgctc 142  Q
    ||||| ||||| |||| | || |||| ||||||| ||||| |||||||||||||  |||||||||||| || |||||||||||||| |||| ||  ||||    
T  20222836 aattatactaaaaaggtagctagatcaggaagcaaaagcaacaaaaggaaagctgtcagtcgcacacggccatgtggctagaagcatgggctgtttgctc 20222737  T
Q  143 ctctctggttgttggccttctttgaaactttgcaggcacgggttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaat 242  Q
    |||||||||||||||              ||||||||||||| ||||  ||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  20222736 ctctctggttgttgga-------------ttgcaggcacgggctgtgtttgatatttttgcacaagatcttcatattttttgcctcaatcagctccaaat 20222650  T
Q  243 c-tccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaa 296  Q
    | || ||||||| ||| |||||| | | |||||||||||||||||| ||||||||    
T  20222649 cttctttcttttactcgaagactaaatctttcatatatttgttccttaaattaaa 20222595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 43 - 296
Target Start/End: Complemental strand, 22116820 - 22116579
Alignment:
Q  43 aattacactaagaaggcatctggatcgggaagcagaagcagcaaaaggaaagcttccagtcgcacacgaccgtgtggctagaagcacgggccgtgcgctc 142  Q
    ||||| ||||| |||| | || |||| ||||||| ||||| |||||||||||||  |||||||||||| || |||||||||||||| |||| ||  ||||    
T  22116820 aattatactaaaaaggtagctagatcaggaagcaaaagcaacaaaaggaaagctgtcagtcgcacacggccatgtggctagaagcatgggctgtttgctc 22116721  T
Q  143 ctctctggttgttggccttctttgaaactttgcaggcacgggttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaat 242  Q
    |||||||||||||||              ||||||||||||| ||||  ||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  22116720 ctctctggttgttgga-------------ttgcaggcacgggctgtgtttgatatttttgcacaagatcttcatattttttgcctcaatcagctccaaat 22116634  T
Q  243 c-tccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaa 296  Q
    | || ||||||| ||| |||||| | | |||||||||||||||||| ||||||||    
T  22116633 cttctttcttttactcgaagactaaatctttcatatatttgttccttaaattaaa 22116579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 196 - 312
Target Start/End: Complemental strand, 20222272 - 20222155
Alignment:
Q  196 atttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaatta 294  Q
    |||||| ||||| || |||||||||||||||||||||| ||||||||||| || |||||||||||||||||| | ||||||||||||||||  |||||||    
T  20222272 atttttacacaatatattcatatttttggcctcaatcagctccaaatctcatttcttttgctccaagactcaatctttcatatatttgttcaagaaatta 20222173  T
Q  295 aataacaagcaattgtag 312  Q
    |||||||||| |||||||    
T  20222172 aataacaagctattgtag 20222155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 196 - 312
Target Start/End: Complemental strand, 22116256 - 22116139
Alignment:
Q  196 atttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaatta 294  Q
    |||||| ||||| || |||||||||||||||||||||| ||||||||||| || |||||||||||||||||| | ||||||||||||||||  |||||||    
T  22116256 atttttacacaatatattcatatttttggcctcaatcagctccaaatctcatttcttttgctccaagactcaatctttcatatatttgttcaagaaatta 22116157  T
Q  295 aataacaagcaattgtag 312  Q
    |||||||||| |||||||    
T  22116156 aataacaagctattgtag 22116139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 176 - 309
Target Start/End: Original strand, 15471419 - 15471552
Alignment:
Q  176 aggcacgggttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaagactcattttttca 274  Q
    |||||| ||||||| ||| ||||||||||||  || |||||||||||||||  |||||||||||||||||| |||||||||||| ||||||| | ||| |    
T  15471419 aggcacaggttgtgtctg-tatttttgcacagaatcttcatatttttggcccgaatcaactccaaatctcctttcttttgctccgagactcaatctttga 15471517  T
Q  275 tatatttgttcctgaaattaaataacaagcaattg 309  Q
      ||||||||||||||||||||||||  |||||||    
T  15471518 actatttgttcctgaaattaaataacttgcaattg 15471552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 20464088 - 20463966
Alignment:
Q  188 tgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcc 286  Q
    ||||||||||||||||| |  || |||||||||||||||  ||||| |||||||||||||| |||||||||||||||||| | ||| | ||||||||||     
T  20464088 tgcctgatatttttgcaaataatcttcatatttttggcccgaatcagctccaaatctcctttcttttgctccaagactcaatctttgaaatatttgttct 20463989  T
Q  287 tgaaattaaataacaagcaattg 309  Q
    ||||||||||||||  |||||||    
T  20463988 tgaaattaaataacttgcaattg 20463966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 15161987 - 15161854
Alignment:
Q  176 aggcacgggttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaagactcattttttca 274  Q
    ||||||||| |||| ||| ||||||||||||  || ||||||||||| |||| |||||||||||||||||| |||||||| ||||||||||| | ||| |    
T  15161987 aggcacgggctgtgtctg-tatttttgcacagaatcttcatatttttagcctgaatcaactccaaatctccgttcttttgttccaagactcaatctttga 15161889  T
Q  275 tatatttgttcctgaaattaaataacaagcaattg 309  Q
      ||||||||||| ||||||||||||  |||||||    
T  15161888 actatttgttcctaaaattaaataacttgcaattg 15161854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 15171994 - 15171861
Alignment:
Q  176 aggcacgggttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctc-cttcttttgctccaagactcattttttca 274  Q
    |||||| ||||||| ||| ||||||||||||  || |||||||||||||||  |||||||||||||||||  |||||||||||| ||||||| | ||| |    
T  15171994 aggcacaggttgtgtctg-tatttttgcacagaatcttcatatttttggcccgaatcaactccaaatctcatttcttttgctccgagactcaatctttga 15171896  T
Q  275 tatatttgttcctgaaattaaataacaagcaattg 309  Q
      |||||||||| |||||||||||||  |||||||    
T  15171895 actatttgttcccgaaattaaataacttgcaattg 15171861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 12658263 - 12658380
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||  | ||||| || |||||||||||   ||||| |||||||||||||| |||||||||||||||||| | ||||| ||||||||||||||||    
T  12658263 gatatttttatataagatctttatatttttggcacaaatcagctccaaatctcctttcttttgctccaagactcaatctttcaaatatttgttcctgaaa 12658362  T
Q  292 ttaaataacaagcaattg 309  Q
    | |||||||  |||||||    
T  12658363 taaaataacttgcaattg 12658380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 12660755 - 12660872
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||  | ||||| || |||||||||||   ||||| |||||||||||||| |||||||||||||||||| | ||||| ||||||||||||||||    
T  12660755 gatatttttatataagatctttatatttttggcacaaatcagctccaaatctcctttcttttgctccaagactcaatctttcaaatatttgttcctgaaa 12660854  T
Q  292 ttaaataacaagcaattg 309  Q
    | |||||||  |||||||    
T  12660855 taaaataacttgcaattg 12660872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 193 - 299
Target Start/End: Original strand, 23574947 - 23575055
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaagactc-attttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| |||||||||||||| | ||||| |||||| ||||| ||||| ||||||||||||| || |||||| |||||||||||||||    
T  23574947 gatatttttgtataagatcttcatatttttggcatgaatcagctccaattctcctttcttctgctccaagactcaatcttttcaaatatttgttcctgaa 23575046  T
Q  291 attaaataa 299  Q
    || ||||||    
T  23575047 ataaaataa 23575055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 13217592 - 13217709
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||| | ||||| ||||||||||||||   ||||| ||  |||||||||| |||||||||||||||| | | ||| | ||||||||||||||||    
T  13217592 gatatttttgtataagatcttcatatttttggcacaaatcagctgtaaatctcctttcttttgctccaagactaaatctttgaaatatttgttcctgaaa 13217691  T
Q  292 ttaaataacaagcaattg 309  Q
    |||||||||  |||||||    
T  13217692 ttaaataacttgcaattg 13217709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 229 - 309
Target Start/End: Original strand, 23348509 - 23348590
Alignment:
Q  229 aatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||| ||||||||||| || |||||||||||||||||| ||||| | |||||||||||||||||||||||||  |||||||    
T  23348509 aatcagctccaaatctcatttcttttgctccaagactcaatttttgaaatatttgttcctgaaattaaataacttgcaattg 23348590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 23517623 - 23517740
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcatt-ttttcatatatttgttcctgaaa 291  Q
    ||||||||| | ||||| |||||||||||| | | ||||| |||||| | ||||| |||||||||||||||||| | |||||| ||||||||||||||||    
T  23517623 atatttttgtataagatcttcatatttttgacatgaatcagctccaattatcctttcttttgctccaagactcaatcttttcaaatatttgttcctgaaa 23517722  T
Q  292 ttaaataacaagcaattg 309  Q
    | |||||||  |||||||    
T  23517723 taaaataacttgcaattg 23517740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 17794232 - 17794348
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||| | || ||  ||||||| |||  ||| | |||||||||||||| |||||||||||||||| | | ||||| |||||||||||||||||    
T  17794232 atatttttgcaccaaatctttgtatttttagcccaaattagctccaaatctcctttcttttgctccaagactaaatctttcaaatatttgttcctgaaat 17794331  T
Q  293 taaataacaagcaattg 309  Q
    ||||||||  |||||||    
T  17794332 taaataacttgcaattg 17794348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 20222400 - 20222273
Alignment:
Q  43 aattacactaagaaggcatctggatcgggaagcagaagcagc-aaaaggaaagcttccagtcgcacacgaccgtgtggctagaagcacgggccgtgcgct 141  Q
    ||||||||||| |||||| ||||||| ||||||| ||||||| ||||||||| ||   ||||||||| | || ||||||| ||  |||||| |||  |||    
T  20222400 aattacactaaaaaggcaactggatcaggaagcaaaagcagcaaaaaggaaacctgttagtcgcacaaggcc-tgtggctggagacacgggtcgtttgct 20222302  T
Q  142 cctctctggttgttggccttctttgaaac 170  Q
    |||||||||||||||||||| ||||||||    
T  20222301 cctctctggttgttggccttgtttgaaac 20222273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 22116384 - 22116257
Alignment:
Q  43 aattacactaagaaggcatctggatcgggaagcagaagcagc-aaaaggaaagcttccagtcgcacacgaccgtgtggctagaagcacgggccgtgcgct 141  Q
    ||||||||||| |||||| ||||||| ||||||| ||||||| ||||||||| ||   ||||||||| | || ||||||| ||  |||||| |||  |||    
T  22116384 aattacactaaaaaggcaactggatcaggaagcaaaagcagcaaaaaggaaacctgttagtcgcacaaggcc-tgtggctggagacacgggtcgtttgct 22116286  T
Q  142 cctctctggttgttggccttctttgaaac 170  Q
    |||||||||||||||||||| ||||||||    
T  22116285 cctctctggttgttggccttgtttgaaac 22116257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 298
Target Start/End: Complemental strand, 18973420 - 18973316
Alignment:
Q  195 tatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaatt 293  Q
    |||||||||| |  || |||||||||||||||  ||||| ||| ||||| |||| ||||||||||||||| || | ||||  ||||||||||||||||||    
T  18973420 tatttttgcatagaatcttcatatttttggcccaaatcagctcgaaatcacctttcttttgctccaagacgcaatctttcgaatatttgttcctgaaatt 18973321  T
Q  294 aaata 298  Q
    |||||    
T  18973320 aaata 18973316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 20221130 - 20221042
Alignment:
Q  43 aattacactaagaaggcatctggatcgggaagcagaagcagcaaaaggaaagcttccagtcgcacacgaccgtgtggctagaagcacgg 131  Q
    ||||| ||||| |||||| ||||||| ||||||| ||||| |||||||||||||  ||||| |||||| || ||||||| |||||||||    
T  20221130 aattatactaaaaaggcagctggatcaggaagcaaaagcaacaaaaggaaagctgtcagtcccacacggccatgtggctggaagcacgg 20221042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 22115114 - 22115026
Alignment:
Q  43 aattacactaagaaggcatctggatcgggaagcagaagcagcaaaaggaaagcttccagtcgcacacgaccgtgtggctagaagcacgg 131  Q
    ||||| ||||| |||||| ||||||| ||||||| ||||| |||||||||||||  ||||| |||||| || ||||||| |||||||||    
T  22115114 aattatactaaaaaggcagctggatcaggaagcaaaagcaacaaaaggaaagctgtcagtcccacacggccatgtggctggaagcacgg 22115026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 29253742 - 29253626
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    ||||||||| || |||| ||||||||||||||   ||||| |||||| | ||||| |||||||||||||||||  | ||||| |||||||||||| ||||    
T  29253742 atatttttgtacgagatcttcatatttttggcacgaatcagctccaattatcctttcttttgctccaagactccatctttcaaatatttgttcctaaaat 29253643  T
Q  293 taaataacaagcaattg 309  Q
     |||||||  |||||||    
T  29253642 aaaataacttgcaattg 29253626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 300
Target Start/End: Original strand, 25031508 - 25031615
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||| | || ||| ||||||| | || ||||| ||||||||||| || |||||||| ||||||||| | ||| | |||||| ||||||||||    
T  25031508 atatttttgcaccaaatcttcgtatttttagtctgaatcagctccaaatctcatttcttttgctgcaagactcaatctttaaaatatttattcctgaaat 25031607  T
Q  293 taaataac 300  Q
    ||||||||    
T  25031608 taaataac 25031615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 29093294 - 29093232
Alignment:
Q  247 ttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||||||||||||| |||||||  |||| |||||||||||||||||||  |||||||    
T  29093294 ttcttttgctccaagactcaatttttcaattattcgttcctgaaattaaataacttgcaattg 29093232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 3923425 - 3923344
Alignment:
Q  229 aatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||| ||||||||||| || |||||||||||||||||| | |||   |||||||||||||||||||||||||  |||||||    
T  3923425 aatcagctccaaatctcatttcttttgctccaagactcaatctttagaatatttgttcctgaaattaaataacttgcaattg 3923344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 13168093 - 13168047
Alignment:
Q  189 gcctgatatttttgcacaagattttcatatttttggcctcaatcaac 235  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||    
T  13168093 gcctgatatttttgcataggatcttcatatttttggcctcaatcaac 13168047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 5949973 - 5950086
Alignment:
Q  197 tttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaa 295  Q
    ||||||||  |||| || ||||||||||| | ||| | |||||| ||||||| |||||||| ||||||||  | ||||| |||||||||||| |||| ||    
T  5949973 tttttgcatgagatctttatatttttggcatgaataagctccaattctcctttcttttgcttcaagactccatctttcaaatatttgttcctaaaataaa 5950072  T
Q  296 ataacaagcaattg 309  Q
    |||||  |||||||    
T  5950073 ataacttgcaattg 5950086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 18234111 - 18234228
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||| |  |||| ||| |||||||||| | ||||| |||||| |||| || | |||||||||||||||  | ||||| |||||||||||| |||    
T  18234111 gatatttttgtatgagatcttcgtatttttggcatgaatcagctccaattctcttttcctttgctccaagactccatctttcaaatatttgttcctaaaa 18234210  T
Q  292 ttaaataacaagcaattg 309  Q
    | |||||||  |||||||    
T  18234211 taaaataacttgcaattg 18234228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 24393210 - 24393315
Alignment:
Q  195 tatttttgcacaagattttcatattttt-ggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||| |  |||||||||||||| ||||  ||||| ||||||||| | || ||||||||||||||| |  | ||||  |||||||||||||||||    
T  24393210 tatttttgcatataattttcatattttttggcccaaatcagctccaaatcacatttcttttgctccaagacgctatctttcgaatatttgttcctgaaat 24393309  T
Q  293 taaata 298  Q
    ||||||    
T  24393310 taaata 24393315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 292
Target Start/End: Complemental strand, 25949076 - 25948975
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||||||   |||||||||||| ||||||| |||||||||||||||||| | |||   |||||||||| ||||    
T  25949076 gatatttttgtataagatcttttatatttttggcacgaatcaactccaattctcctttcttttgctccaagactcaatctttagaatatttgttcatgaa 25948977  T
Q  291 at 292  Q
    ||    
T  25948976 at 25948975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 25963676 - 25963555
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||||||   ||||| |||||| ||||||| ||||||||| |||||||| | |||   |||||||||||||||    
T  25963676 gatatttttgtataagatcttttatatttttggcacgaatcagctccaattctcctttcttttgctctaagactcaatctttagaatatttgttcctgaa 25963577  T
Q  291 attaaataacaagcaattgtag 312  Q
    ||  ||||||  ||||||||||    
T  25963576 atataataacttgcaattgtag 25963555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 25968323 - 25968202
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||||||   ||||| |||||| ||||||| ||||||||| |||||||| | |||   |||||||||||||||    
T  25968323 gatatttttgtataagatcttttatatttttggcacgaatcagctccaattctcctttcttttgctctaagactcaatctttagaatatttgttcctgaa 25968224  T
Q  291 attaaataacaagcaattgtag 312  Q
    ||  ||||||  ||||||||||    
T  25968223 atataataacttgcaattgtag 25968202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 17739430 - 17739358
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaagact 264  Q
    |||||||||| |  |||| |||||||||||||| | ||| |||||||| ||||| ||||||||||||||||||    
T  17739430 gatatttttgtatgagatcttcatatttttggcatgaattaactccaattctcctttcttttgctccaagact 17739358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 26138471 - 26138363
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||| |  |||| ||||||||||||||   ||| | ||| || ||||||| |||||||||||||||||  | ||||| |||||||||||| |||    
T  26138471 gatatttttgtatcagatcttcatatttttggcacgaattagctcaaattctcctttcttttgctccaagactccatctttcaaatatttgttcctaaaa 26138372  T
Q  292 ttaaataac 300  Q
    | |||||||    
T  26138371 taaaataac 26138363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 24545948 - 24546019
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataac 300  Q
    ||||| ||||||||| | |||||||||||||||||||| | |||   |||||||||| | ||||||||||||    
T  24545948 aatcagctccaaatccctttcttttgctccaagactcaatctttagaatatttgttctttaaattaaataac 24546019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 32797029 - 32797084
Alignment:
Q  253 tgctccaagactcattttttcat-atatttgttcctgaaattaaataacaagcaat 307  Q
    |||||||||||||| |||||||  ||||||||||||| ||||||||||||| ||||    
T  32797029 tgctccaagactcaatttttcaccatatttgttcctggaattaaataacaaacaat 32797084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 18627175 - 18627101
Alignment:
Q  235 ctccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||||||| | |||||||||||||||| ||| | |||   |||||| ||||||||||||||||||  |||||||    
T  18627175 ctccaaatccctttcttttgctccaagattcaatctttagaatatttattcctgaaattaaataacttgcaattg 18627101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 291
Target Start/End: Complemental strand, 25606695 - 25606633
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    ||||||||||||||| | |||||||||||||||||||| |   ||| ||||| ||||||||||    
T  25606695 aatcaactccaaatccctttcttttgctccaagactcaatccatcaaatattcgttcctgaaa 25606633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 26017717 - 26017608
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctccttctttt--gctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| |  |||| ||||||||||||||   ||| | |||||| ||||||| ||||  ||||||||||||  | ||||| |||||||||||| ||    
T  26017717 gatatttttgtatcagatcttcatatttttggcacgaattagctccaattctcctttttttttgctccaagactccatctttcaaatatttgttcctaaa 26017618  T
Q  291 attaaataac 300  Q
    || |||||||    
T  26017617 ataaaataac 26017608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 26157090 - 26156981
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctccttctttt--gctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| |  |||| ||||||||||||||   ||| | |||||| ||||||| ||||  ||||||||||||  | ||||| |||||||||||| ||    
T  26157090 gatatttttgtatcagatcttcatatttttggcacgaattagctccaattctcctttttttttgctccaagactccatctttcaaatatttgttcctaaa 26156991  T
Q  291 attaaataac 300  Q
    || |||||||    
T  26156990 ataaaataac 26156981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 28221873 - 28221931
Alignment:
Q  251 tttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||||||||| ||||| |  ||||| ||||||||||||||||||  |||||||    
T  28221873 tttgctccaagactcaattttttaattatttattcctgaaattaaataacttgcaattg 28221931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 1122893 - 1122856
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  1122893 aatcaactccaaatccctttcttttgctccaagactca 1122856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 25507382 - 25507293
Alignment:
Q  212 ttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataac 300  Q
    ||||||||||||||   ||||| |||||| ||||||| ||||| |||||||||||  | ||||| |||||| ||||| |||| |||||||    
T  25507382 ttcatatttttggcacgaatcagctccaattctcctttctttttctccaagactccatctttcaaatattttttcctaaaataaaataac 25507293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 300
Target Start/End: Original strand, 18399925 - 18400033
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||| |  |||| |||||||||||||||  ||||| ||| || | ||||| ||||| ||||||||||||   ||||| |||||| ||| |||||    
T  18399925 gatatttttgtattagatcttcatatttttggccggaatcagctctaattatcctttctttttctccaagactcaaactttcaaatatttattcttgaaa 18400024  T
Q  292 ttaaataac 300  Q
    | |||||||    
T  18400025 taaaataac 18400033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 19993349 - 19993277
Alignment:
Q  229 aatcaactccaaatc-tccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataac 300  Q
    ||||||| ||||||| || |||||||||||||||||| | | |||   |||||||||||||||||| ||||||    
T  19993349 aatcaacaccaaatcctctttcttttgctccaagactgaatctttagaatatttgttcctgaaattgaataac 19993277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 309
Target Start/End: Original strand, 25923723 - 25923803
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||| ||||||| | | ||||||||||| |||||||| | |||   |||||||||| ||||||||||||||  |||||||    
T  25923723 aatcacctccaaacccctttcttttgctctaagactcaatctttagaatatttgttcttgaaattaaataacttgcaattg 25923803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 312
Target Start/End: Original strand, 27566115 - 27566215
Alignment:
Q  212 ttcatatttttggcctcaatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgta 311  Q
    ||||||||||||  |  ||||| ||||||||| | |||||||||||||||||||| |   ||  ||||| |||||||||||  ||||| | |||||||||    
T  27566115 ttcatatttttgtaccgaatcagctccaaatccctttcttttgctccaagactcaatccatccaatattcgttcctgaaatataataaaatgcaattgta 27566214  T
Q  312 g 312  Q
    |    
T  27566215 g 27566215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30245176 - 30245144
Alignment:
Q  1 aatagaatgttccacaagaaaccacgtgctttt 33  Q
    |||||||||||||||||||||||||| ||||||    
T  30245176 aatagaatgttccacaagaaaccacgagctttt 30245144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 4e-60; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 38877348 - 38877018
Alignment:
Q  1 aatagaatgttccacaagaaaccacgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagcagcaaaaggaaagcttcca 100  Q
    |||||||||||||||||||||||| | |||||||  |  || ||||||||||| ||||||  ||| || ||||||| |||||||||||||||||||  ||    
T  38877348 aatagaatgttccacaagaaaccatgggcttttaagt--cagaattacactaaaaaggcagttgggtcaggaagcaaaagcagcaaaaggaaagctgtca 38877251  T
Q  101 gtcgcacacgaccgtgtggctagaagcacgggccgtgcgctcctctctggttgttggccttctttgaaactttgcaggcacgg----------------- 183  Q
    |||||||||| |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||                     
T  38877250 gtcgcacacggccgtgtggctggaggcacgggccgtgtgctcctctctggttgctggccttctttgaaacattgcaggcacggactgcgtcaccacaggc 38877151  T
Q  184 ----gttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctccttcttttgctccaagactcattttttcatatat 279  Q
        |||||| || |||||||||||||  || |  |||||||| |||||||||| || |||||||| |||||||||||||||||||| | ||||||||||    
T  38877150 acgagttgtgtctcatatttttgcacataatctatatatttttagcctcaatcagctacaaatctctttcttttgctccaagactcaatctttcatatat 38877051  T
Q  280 ttgttcctgaaattaaataacaagcaattgtag 312  Q
    || ||| ||||||||||||||||||||||||||    
T  38877050 tttttcttgaaattaaataacaagcaattgtag 38877018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 186 - 312
Target Start/End: Complemental strand, 15522786 - 15522659
Alignment:
Q  186 tgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgtt 284  Q
    ||||||| ||||||||||||||||| ||||||||||| |||||||||| ||| |||  ||||| || ||||||||||||||| | |||||||||||||||    
T  15522786 tgtgccttatatttttgcacaagatcttcatatttttagcctcaatcagctctaaaattcctttctcttgctccaagactcaatctttcatatatttgtt 15522687  T
Q  285 cctgaaattaaataacaagcaattgtag 312  Q
    ||||||||||||||||||||||||||||    
T  15522686 cctgaaattaaataacaagcaattgtag 15522659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 186 - 309
Target Start/End: Original strand, 680259 - 680383
Alignment:
Q  186 tgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgtt 284  Q
    ||||||||||||||||||||||||  || ||||||| ||||||||||| ||||||||| |||| |||||||||||||||||| | |||||||||||||||    
T  680259 tgtgcctgatatttttgcacaagacatttatattttaggcctcaatcagctccaaatcccctttcttttgctccaagactcaatctttcatatatttgtt 680358  T
Q  285 cctgaaattaaataacaagcaattg 309  Q
    | ||||||||||||||||| |||||    
T  680359 catgaaattaaataacaagtaattg 680383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 192 - 309
Target Start/End: Original strand, 30064283 - 30064401
Alignment:
Q  192 tgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||||||||  || |||||||||||||||  ||||||||| |||||||||| |||||||||||||||||| | ||| | ||||||||| |||||    
T  30064283 tgatatttttgcacataatcttcatatttttggcccgaatcaactcaaaatctcctttcttttgctccaagactcaatctttaaaatatttgtttctgaa 30064382  T
Q  291 attaaataacaagcaattg 309  Q
    ||||||||||  |||||||    
T  30064383 attaaataacttgcaattg 30064401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 17911379 - 17911263
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||| | || ||| |||||||||||  ||||| ||||||||||| || |||||||||||||||||| | ||||| |||||||||||||||||    
T  17911379 atatttttgcaccaaatcttcgtatttttggcccgaatcagctccaaatctcgtttcttttgctccaagactcaatctttcaaatatttgttcctgaaat 17911280  T
Q  293 taaataacaagcaattg 309  Q
    ||||||||  |||||||    
T  17911279 taaataacttgcaattg 17911263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 309
Target Start/End: Original strand, 4467305 - 4467420
Alignment:
Q  195 tatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaatt 293  Q
    ||||||||||||  || ||||||| |||||||  ||||| |||||||||||||| ||||||||| ||||| || | ||||| |||||||||| |||||||    
T  4467305 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttgaaatt 4467404  T
Q  294 aaataacaagcaattg 309  Q
    |||||||  |||||||    
T  4467405 aaataacttgcaattg 4467420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 245 - 309
Target Start/End: Original strand, 3194915 - 3194980
Alignment:
Q  245 ccttcttttgctccaagactcattttttcat-atatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||||||||||||||| | |||||  ||||||||||||||||||||||||||||||||||    
T  3194915 ccttcttttgctccaagactcaatatttcaccatatttgttcctgaaattaaataacaagcaattg 3194980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 4983420 - 4983536
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||| | || ||| |||||||  ||  ||||| |||||||||||||| ||||| ||| |||||||| | ||||| |||||||||||||||||    
T  4983420 atatttttgcaccaaatcttcgtatttttttcccgaatcagctccaaatctcctttctttttctcaaagactcaatctttcaaatatttgttcctgaaat 4983519  T
Q  293 taaataacaagcaattg 309  Q
    ||||||||  |||||||    
T  4983520 taaataacttgcaattg 4983536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 4540980 - 4540882
Alignment:
Q  212 ttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||||||||||| |  ||||| ||||||||||| || |||||||||||||||| | | ||||| |||||| ||||||||||||||||||  |||||||    
T  4540980 ttcatatttttggtccgaatcagctccaaatctcttttcttttgctccaagactaaatctttcaaatatttattcctgaaattaaataacttgcaattg 4540882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 649103 - 649224
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| ||||||| ||| |||||||||||   ||||| |||||| ||||||| |||||||||||||||||| | |||   |||||||||||||||    
T  649103 gatatttttgtacaagatcttttatatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctgaa 649202  T
Q  291 attaaataacaagcaattgtag 312  Q
    ||  ||||| | ||||||||||    
T  649203 atataataatatgcaattgtag 649224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 300
Target Start/End: Original strand, 4461034 - 4461142
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||| | ||||| ||||||||||||||    |||| |||||| ||||||| ||||||||||||||| || | ||| | ||||||||||||||||    
T  4461034 gatatttttgtataagatcttcatatttttggcacggatcagctccaattctcctttcttttgctccaagacgcaatctttgaaatatttgttcctgaaa 4461133  T
Q  292 ttaaataac 300  Q
    | |||||||    
T  4461134 taaaataac 4461142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 300
Target Start/End: Original strand, 11484153 - 11484261
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||| ||||| | ||||| |||||| ||||||| | ||||| |||||||||||||| |||||||||  ||||||| | ||||| |||||||||||| |||    
T  11484153 gatacttttgtataagatcttcatacttttggcataaatcagctccaaatctcctttcttttgctctgagactcaatctttcaaatatttgttcctaaaa 11484252  T
Q  292 ttaaataac 300  Q
    | |||||||    
T  11484253 taaaataac 11484261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 5825807 - 5825736
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataac 300  Q
    ||||| ||||||| | | |||||||||||||||||||| |||||   |||||||||||||||||||||||||    
T  5825807 aatcagctccaaacccctttcttttgctccaagactcaatttttagaatatttgttcctgaaattaaataac 5825736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 16897626 - 16897721
Alignment:
Q  215 atatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||||   |||||||||||| ||||||| |||||||||||||||| | | |||   |||||||||||||||||||||||||  |||||||    
T  16897626 atatttttggcacgaatcaactccaattctcctttcttttgctccaagactaaatcttttgaatatttgttcctgaaattaaataacttgcaattg 16897721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 309
Target Start/End: Complemental strand, 1462324 - 1462207
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||| |  |||| |||||| ||||||| | ||| | |||||| ||||||| |||||||||||||||||  | ||||| |||||||||||| |||    
T  1462324 gatatttttgtatgagatcttcatacttttggcatgaataagctccaattctcctttcttttgctccaagactccatctttcaaatatttgttcctaaaa 1462225  T
Q  292 ttaaataacaagcaattg 309  Q
    | |||||||  |||||||    
T  1462224 taaaataacttgcaattg 1462207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 312
Target Start/End: Complemental strand, 4312972 - 4312870
Alignment:
Q  211 tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||||||||   ||||| |||||| | ||||| |||||||||||||||||| | |||   |||||||||||||||||  ||||| | |||||||    
T  4312972 tttcatatttttggcacgaatcagctccaattttcctttcttttgctccaagactcaatctttagaatatttgttcctgaaatataataatatgcaattg 4312873  T
Q  310 tag 312  Q
    |||    
T  4312872 tag 4312870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 15707580 - 15707678
Alignment:
Q  215 atatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    |||||||||||   ||||| |||||| ||||||| |||||||||||||||||| | |||   |||||||||||||||||  ||||| | ||||||||||    
T  15707580 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctgaaatataataatatgcaattgtag 15707678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 286
Target Start/End: Original strand, 21005795 - 21005889
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcc 286  Q
    |||||||||| |  |||| |||||||||||||| | ||| | |||||| ||||||| |||||||||||||||||  | ||||| |||||||||||    
T  21005795 gatatttttgtatgagatcttcatatttttggcatgaataagctccaattctcctttcttttgctccaagactccatctttcaaatatttgttcc 21005889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 300
Target Start/End: Complemental strand, 46274123 - 46274037
Alignment:
Q  215 atatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataac 300  Q
    |||||||||||   |||||||||||| ||||||| |||||||||||||||| | | |||   |||||||||| ||||||||||||||    
T  46274123 atatttttggcagaaatcaactccaattctcctttcttttgctccaagactaaatcttttgaatatttgttcatgaaattaaataac 46274037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 6712829 - 6712870
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaac 235  Q
    ||||||||||| ||||| ||||||||||||||||||||||||    
T  6712829 atatttttgcataagatcttcatatttttggcctcaatcaac 6712870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 9192575 - 9192454
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||||||   ||||| |||||| ||| ||| |||||||||||||||||| | |||   |||||||||||||||    
T  9192575 gatatttttgtataagatcttttatatttttggcacgaatcagctccaattcttctttcttttgctccaagactcaatctttagaatatttgttcctgaa 9192476  T
Q  291 attaaataacaagcaattgtag 312  Q
    ||  ||||| | ||||||||||    
T  9192475 atataataatatgcaattgtag 9192454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 16463542 - 16463663
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||||||   ||| | |||||| ||||||| |||||||||||||||||| | |||   |||||||||||||||    
T  16463542 gatatttttgtataagatcttttatatttttggcacgaattagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctgaa 16463641  T
Q  291 attaaataacaagcaattgtag 312  Q
    ||  ||||||  ||||||||||    
T  16463642 atataataacttgcaattgtag 16463663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 19515697 - 19515814
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||| |  |||| ||||||||||||||   ||||| |||||| | ||||| |||||||||||||||||  | ||||| ||||||||| || |||    
T  19515697 gatatttttgtatgagatcttcatatttttggcacgaatcagctccaattatcctttcttttgctccaagactccatctttcaaatatttgtttctaaaa 19515796  T
Q  292 ttaaataacaagcaattg 309  Q
    | |||||||  |||||||    
T  19515797 taaaataacttgcaattg 19515814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 33612585 - 33612706
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||||||   |||||||||||| |||| || |||||||||||||||||| | |||   |||||||||| ||||    
T  33612585 gatatttttgtataagatcttttatatttttggcacgaatcaactccaattctcatttcttttgctccaagactcaatctttagaatatttgttcttgaa 33612684  T
Q  291 attaaataacaagcaattgtag 312  Q
    ||  ||||| | ||||||||||    
T  33612685 atataataatatgcaattgtag 33612706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 48355906 - 48356027
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||||||   ||||| |||||| | ||||| |||||||||||||||||| | |||   |||||||||||||||    
T  48355906 gatatttttgtataagatcttttatatttttggcacgaatcagctccaattatcctttcttttgctccaagactcaatctttagaatatttgttcctgaa 48356005  T
Q  291 attaaataacaagcaattgtag 312  Q
    ||  ||||||  ||||||||||    
T  48356006 atataataacttgcaattgtag 48356027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 9194327 - 9194443
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||  | || || ||||||||||| | ||| | || ||| ||||||| |||||||||||||||||  | ||||| |||||||||||| ||||    
T  9194327 atatttttgcatgaaatctttatatttttggcatgaataagcttcaattctcctttcttttgctccaagactccatctttcaaatatttgttcctaaaat 9194426  T
Q  293 taaataacaagcaattg 309  Q
     |||||||  |||||||    
T  9194427 aaaataacttgcaattg 9194443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 312
Target Start/End: Complemental strand, 10204441 - 10204321
Alignment:
Q  194 atatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    ||||||||| | ||||| ||| |||||||||||   | ||| |||||| ||||||| |||||||||||||||||| | |||   ||||||||||||||||    
T  10204441 atatttttgtataagatcttttatatttttggcacgattcatctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctgaaa 10204342  T
Q  292 ttaaataacaagcaattgtag 312  Q
    |  ||||||  ||||||||||    
T  10204341 tataataacttgcaattgtag 10204321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 14942082 - 14942166
Alignment:
Q  229 aatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    ||||| |||||| ||||||| |||||||||||||||||| | |||   |||||||||||||||||  ||||||  ||||||||||    
T  14942082 aatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctgaaatataataacttgcaattgtag 14942166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 15369675 - 15369759
Alignment:
Q  229 aatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    ||||| |||||| ||||||| |||||||||||||||||| | |||   |||||||||||||||||  ||||||  ||||||||||    
T  15369675 aatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctgaaatataataacttgcaattgtag 15369759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 292
Target Start/End: Complemental strand, 9004384 - 9004285
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||  |||| || ||||||||| | | ||| | |||||| ||| ||| ||||||| |||||||||| | ||||| |||||||||||||||||    
T  9004384 atatttttgcatgagatctttatatttttgccatgaataagctccaattcttctttcttttgccccaagactcaatctttcaaatatttgttcctgaaat 9004285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 21062957 - 21063031
Alignment:
Q  235 ctccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||||||| | |||||||||||||||  ||| | |||   |||||||||||||||||||||||||  |||||||    
T  21062957 ctccaaatccctttcttttgctccaagtatcaatctttagaatatttgttcctgaaattaaataacttgcaattg 21063031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 299
Target Start/End: Complemental strand, 48713227 - 48713121
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||  |||| || ||||||||||| | ||| | ||| || |||| || |||||||||||||||||  | ||||| |||||||||||| ||||    
T  48713227 atatttttgcatgagatctttatatttttggcatgaataagctctaattctcttttcttttgctccaagactccatctttcaaatatttgttcctaaaat 48713128  T
Q  293 taaataa 299  Q
     ||||||    
T  48713127 aaaataa 48713121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 545448 - 545485
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  545448 aatcaactccaaatccctttcttttgctccaagactca 545485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 23203555 - 23203518
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  23203555 aatcaactccaaatccctttcttttgctccaagactca 23203518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 23509682 - 23509645
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  23509682 aatcaactccaaatccctttcttttgctccaagactca 23509645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 23515464 - 23515427
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  23515464 aatcaactccaaatccctttcttttgctccaagactca 23515427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 41113162 - 41113199
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  41113162 aatcaactccaaatccctttcttttgctccaagactca 41113199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 6712922 - 6712978
Alignment:
Q  247 ttcttttgctccaagactcattttttcat-atatttgttcctgaaattaaataacaa 302  Q
    |||||||||| ||||||||| | |||||  |||||| ||||||||||||||||||||    
T  6712922 ttcttttgctacaagactcaatctttcaccatatttattcctgaaattaaataacaa 6712978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 311
Target Start/End: Original strand, 8880322 - 8880442
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||||| ||||  ||| |||||||||||   ||||| |||||| |||| || |||||||||||||||||| | |||   |||||||||||| ||    
T  8880322 gatatttttgcataagaacttttatatttttggcacgaatcagctccaattctcttttcttttgctccaagactcaatctttagaatatttgttcctaaa 8880421  T
Q  291 attaaataacaagcaattgta 311  Q
    ||  ||||||  |||||||||    
T  8880422 atataataacttgcaattgta 8880442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 9e-46; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 161 - 309
Target Start/End: Complemental strand, 24164820 - 24164672
Alignment:
Q  161 tctttgaaactttgcaggcacgggttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctcca 259  Q
    |||||||||||||| ||||||||   |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  24164820 tctttgaaactttggaggcacggcc-gtgcctgatatttttgcacaagatcttcatatttttggcttcaatcatctccaaatctcctttcttttgctcca 24164722  T
Q  260 agactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||||| | |||||||||||||||||||||||||||||||  |||||||    
T  24164721 agactcaatctttcatatatttgttcctgaaattaaataacttgcaattg 24164672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 23029927 - 23030052
Alignment:
Q  187 gtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttc 285  Q
    |||||||||||||||||||  ||  ||||||||||| ||| |||||| || ||||||||||| |||||||||||||||||| | ||||| ||||||||||    
T  23029927 gtgcctgatatttttgcaccggaccttcatattttttgccacaatcagctacaaatctcctttcttttgctccaagactcaatctttca-atatttgttc 23030025  T
Q  286 ctgaaattaaataacaagcaattgtag 312  Q
    |||||||||||||||| ||||||||||    
T  23030026 ctgaaattaaataacatgcaattgtag 23030052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 309
Target Start/End: Complemental strand, 16676887 - 16676770
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||| | ||||| ||||||||||||||   ||||| || |||||| | || |||||||||||||||||| | ||||| |||||||||||  |||    
T  16676887 gatatttttgtataagatcttcatatttttggcacaaatcagcttcaaatcccttttcttttgctccaagactcaatctttcaaatatttgttccataaa 16676788  T
Q  292 ttaaataacaagcaattg 309  Q
    |||||||||  |||||||    
T  16676787 ttaaataacttgcaattg 16676770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 22170538 - 22170457
Alignment:
Q  229 aatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||||||||||||| |||||||||||||||||| | |||   |||||||||| ||||||||||||||  |||||||    
T  22170538 aatcaactccaaatctcctttcttttgctccaagactcaatatttagaatatttgttcatgaaattaaataacttgcaattg 22170457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 20967521 - 20967400
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||||||   ||||| |||||| ||||||| |||||||||||||||||| | |||   |||||||||||||||    
T  20967521 gatatttttgtataagatcttttatatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctgaa 20967422  T
Q  291 attaaataacaagcaattgtag 312  Q
    ||  ||||||  ||||||||||    
T  20967421 atataataacttgcaattgtag 20967400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 23029759 - 23029811
Alignment:
Q  39 tcaaaattacactaagaaggcatctggatcgggaagcagaagcagcaaaagga 91  Q
    ||||||||||||||| |||||| ||||||| ||||||| ||||||||||||||    
T  23029759 tcaaaattacactaaaaaggcagctggatcaggaagcaaaagcagcaaaagga 23029811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 2953823 - 2953940
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||| |  |||| ||||||||||||||   ||||| |||||| ||||||| |||||| ||||||||| | | |||   ||||||||||||||||    
T  2953823 gatatttttgtatgagatcttcatatttttggcacgaatcagctccaattctcctttcttttgttccaagactaaatcttttgaatatttgttcctgaaa 2953922  T
Q  292 ttaaataacaagcaattg 309  Q
    | |||||||  |||||||    
T  2953923 taaaataacttgcaattg 2953940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 25486018 - 25486134
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||  |||| || ||||||||||  | ||| | |||||| ||||||| ||||||||| |||||||  | ||||| |||||||||||| ||||    
T  25486018 atatttttgcatgagatctttatatttttggtatgaataagctccaattctcctttcttttgctcaaagactccatctttcaaatatttgttcctaaaat 25486117  T
Q  293 taaataacaagcaattg 309  Q
     |||||||  |||||||    
T  25486118 aaaataacttgcaattg 25486134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 31414396 - 31414324
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactc-attttttcatatatttgttcctgaaattaaataac 300  Q
    ||||| || |||||||| ||||||||||||||||||| || |||  | |||||||||| ||||||||||||||    
T  31414396 aatcagcttcaaatctctttcttttgctccaagactcaatctttagaaatatttgttcttgaaattaaataac 31414324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 309
Target Start/End: Original strand, 31758458 - 31758538
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||| ||||||||| | |||||||||||||| ||||| | |||   |||||| ||||||||||||||||||  |||||||    
T  31758458 aatcagctccaaatccctttcttttgctccaaaactcaatctttagaatatttattcctgaaattaaataacttgcaattg 31758538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 3387783 - 3387720
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    ||||| ||||||||| | |||||||||||||||||||| ||  | | |||||||||||||||||    
T  3387783 aatcagctccaaatccctttcttttgctccaagactcaattcataaaatatttgttcctgaaat 3387720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 23110442 - 23110379
Alignment:
Q  247 ttcttttgctccaagactcattttttcat-atatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||  ||||||||||| | |||||  ||||||||||||||||| ||||||||||||||||    
T  23110442 ttctttttatccaagactcaatctttcaccatatttgttcctgaaatgaaataacaagcaattg 23110379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 312
Target Start/End: Original strand, 23343897 - 23343980
Alignment:
Q  230 atcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    |||| |||||| ||||||| |||||||||||||||||| | |||   |||||||||||||||||  ||||||  ||||||||||    
T  23343897 atcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctgaaatataataacttgcaattgtag 23343980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 12410280 - 12410199
Alignment:
Q  229 aatcaactccaaatc-tccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||| ||||||||| || ||||||||| |||| ||||| | |||   |||||||||||||||||||||||||  |||||||    
T  12410280 aatcagctccaaatcctctttcttttgcgccaaaactcaatctttagaatatttgttcctgaaattaaataacttgcaattg 12410199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 20444658 - 20444695
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  20444658 aatcaactccaaatccctttcttttgctccaagactca 20444695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 20450139 - 20450176
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  20450139 aatcaactccaaatccctttcttttgctccaagactca 20450176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 24214511 - 24214474
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  24214511 aatcaactccaaatccctttcttttgctccaagactca 24214474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 41766065 - 41766102
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  41766065 aatcaactccaaatccctttcttttgctccaagactca 41766102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 15059169 - 15059085
Alignment:
Q  229 aatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    ||||| |||||| ||||||| |||||||||||||||||| | |||   ||||||||||| |||||  ||||| | ||||||||||    
T  15059169 aatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcccgaaatataataatatgcaattgtag 15059085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 292
Target Start/End: Original strand, 20104263 - 20104363
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||| |  |||| |||||||||||||| ||||| | ||  || ||||||| |||||||||||||||||  | ||||| |||||| ||||| |||    
T  20104263 gatatttttgtatgagatcttcatatttttggcatcaataagctataattctcctttcttttgctccaagactccatctttcaaatatttattcctaaaa 20104362  T
Q  292 t 292  Q
    |    
T  20104363 t 20104363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 24143541 - 24143613
Alignment:
Q  229 aatcaactccaaatc-tccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataac 300  Q
    ||||| ||||||||| || |||||||||||||||||| | | |||   |||||||||||| ||||||||||||    
T  24143541 aatcagctccaaatcctctttcttttgctccaagactgaatctttagaatatttgttcctaaaattaaataac 24143613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 6e-44; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 176 - 309
Target Start/End: Original strand, 16212625 - 16212759
Alignment:
Q  176 aggcacgggttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaagactcattttttca 274  Q
    ||||||||| || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| | |||||    
T  16212625 aggcacgggctgcgcctgatatttttgcacaagatcttcatatttttggtctcaatcaactccaaatttcctttcttttgctccaagactcaatctttca 16212724  T
Q  275 tatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||||||||||||||||||||||||  |||||||    
T  16212725 tatatttgttcctgaaattaaataacttgcaattg 16212759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 23793739 - 23794072
Alignment:
Q  1 aatagaatgttccacaagaaaccacgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagcagcaaaaggaaagcttcca 100  Q
    |||||||||||||||||||||||| | |||||||  |  |||||||||||||| ||| ||  |||||| |||||||         ||||||||||| |||    
T  23793739 aatagaatgttccacaagaaaccatgggcttttaggt--caaaattacactaaaaagacagttggatcaggaagca---------aaaggaaagctgcca 23793827  T
Q  101 gtcgcacacgaccgtgtggctagaagcacgggccgtgcgctcctctctggttgttggccttctttgaaactttgcaggcacgg----------------- 183  Q
    ||||| |||  |||||||||| || ||||||| |||| |||||| ||||||||||| |||||||||||||||| ||||||| |                     
T  23793828 gtcgcgcaccgccgtgtggctggaggcacgggtcgtgtgctcctttctggttgttgtccttctttgaaactttacaggcacaggttgtgtcactacaggc 23793927  T
Q  184 ---gttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-------------ttcttttgctccaagactcat 267  Q
       |||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||             || |||||||| ||||||||     
T  23793928 acagttgtgcctgatatttttacacaagatcttcatatttttggcctcaatcagctccaaatctccttttttttttttttttttttgctctaagactcaa 23794027  T
Q  268 tttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    | ||||||||||||||||||||||||||  |||||||||||||||    
T  23794028 tctttcatatatttgttcctgaaattaagaaacaagcaattgtag 23794072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 194 - 300
Target Start/End: Original strand, 22181326 - 22181433
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||| | || ||| |||||||||||  ||||| |||| ||||||||| |||||||||||||||||| | ||| | |||||||||||||||||    
T  22181326 atatttttgcaccaaatcttcgtatttttggcccgaatcagctccgaatctcctttcttttgctccaagactcaatctttgaaatatttgttcctgaaat 22181425  T
Q  293 taaataac 300  Q
    ||||||||    
T  22181426 taaataac 22181433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 194 - 299
Target Start/End: Original strand, 5513937 - 5514043
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||  | |||||| |||||||||||  ||||| ||| ||||||| || |||||||||||||||||| | ||||| |||||||||||||||||    
T  5513937 atatttttgcatcaaattttcttatttttggcccgaatcagctctaaatctcatttcttttgctccaagactcaatctttcaaatatttgttcctgaaat 5514036  T
Q  293 taaataa 299  Q
    |||||||    
T  5514037 taaataa 5514043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 312
Target Start/End: Complemental strand, 5675236 - 5675099
Alignment:
Q  176 aggcacgggttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctc-cttcttttgctccaagactcattttttca 274  Q
    ||||||||| |||| |||||||||||||| |  || |||||||||||| |   ||||| || ||||| ||  |||||||||||||||||||| | |||||    
T  5675236 aggcacgggctgtgtctgatatttttgcatagaatcttcatatttttgccgcgaatcagcttcaaatttcatttcttttgctccaagactcaatctttca 5675137  T
Q  275 tatatttgttcctgaaattaaataacaagcaattgtag 312  Q
     |||||||||||| ||||||||||||  ||||||||||    
T  5675136 aatatttgttcctaaaattaaataacttgcaattgtag 5675099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 300
Target Start/End: Original strand, 33331346 - 33331459
Alignment:
Q  188 tgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctc-cttcttttgctccaagactcattttttcatatatttgttcc 286  Q
    |||||||||||||||||||  || |||||||||||||||  ||||| |||||||||||  ||||||||||||||||||   | ||| | ||| |||||||    
T  33331346 tgcctgatatttttgcacataatcttcatatttttggccctaatcagctccaaatctcatttcttttgctccaagacttgatctttaaaatacttgttcc 33331445  T
Q  287 tgaaattaaataac 300  Q
    ||||||||||||||    
T  33331446 tgaaattaaataac 33331459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 194 - 300
Target Start/End: Original strand, 11922718 - 11922825
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||| | || |||||||||||||||| ||| |||||||||||||| |||||||||||||| || || | ||| | |||||||||| ||||||    
T  11922718 atatttttgcaccaaatcttcatatttttggcctgaataaactccaaatctcctttcttttgctccaatacacaatctttgaaatatttgttcatgaaat 11922817  T
Q  293 taaataac 300  Q
     |||||||    
T  11922818 aaaataac 11922825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 229 - 309
Target Start/End: Original strand, 9488704 - 9488785
Alignment:
Q  229 aatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||| |||||||||||||| |||||||||||||||||| | ||| | |||||||||||||||||||||||||  |||||||    
T  9488704 aatcagctccaaatctcctttcttttgctccaagactcaatctttgaaatatttgttcctgaaattaaataacttgcaattg 9488785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 309
Target Start/End: Complemental strand, 38651946 - 38651829
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||| | ||||| || ||||||||||| | ||||| |||||| ||||||| |||||||||||||||||| | |||   |||||||||| |||||    
T  38651946 gatatttttgtataagatcttaatatttttggcatgaatcagctccaattctcctttcttttgctccaagactcaatcttttgaatatttgttcatgaaa 38651847  T
Q  292 ttaaataacaagcaattg 309  Q
    | |||||||  |||||||    
T  38651846 taaaataacttgcaattg 38651829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 24125538 - 24125658
Alignment:
Q  194 atatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    ||||||||| | ||||| ||| |||||||||||   ||||| |||||| ||||||| |||||||||||||||||| | ||| | |||||||||||| |||    
T  24125538 atatttttgtataagatcttttatatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttaaaatatttgttcctaaaa 24125637  T
Q  292 ttaaataacaagcaattgtag 312  Q
    |  ||||||  ||||||||||    
T  24125638 tataataacttgcaattgtag 24125658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 292
Target Start/End: Original strand, 11902942 - 11903043
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||||||   ||||| |||||| ||||||| |||||||||||||||||| | |||   |||||||||||||||    
T  11902942 gatatttttgtataagatcttttatatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctgaa 11903041  T
Q  291 at 292  Q
    ||    
T  11903042 at 11903043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 45234013 - 45234134
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctccttctttt-gctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||||||   ||||| |||||| ||||||| |||| ||||||||||||| | |||   |||||||||||||||    
T  45234013 gatatttttgtataagatcttttatatttttggcacgaatcagctccaattctccttttttttgctccaagactcaatctttagaatatttgttcctgaa 45234112  T
Q  291 attaaataacaagcaattgtag 312  Q
    ||  ||||||  ||||||||||    
T  45234113 atataataacttgcaattgtag 45234134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 12346978 - 12346922
Alignment:
Q  247 ttcttttgctccaagactcattttttcat-atatttgttcctgaaattaaataacaa 302  Q
    ||||||| |||||||||||| | |||||  |||||||||||||||||||||||||||    
T  12346978 ttctttttctccaagactcaatctttcaccatatttgttcctgaaattaaataacaa 12346922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 309
Target Start/End: Original strand, 17484729 - 17484809
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||||||||||| ||| |||||||||||||||||||| |   ||| ||||| |||||||||||  ||||| | |||||||    
T  17484729 aatcaactccaaacctctttcttttgctccaagactcaatccatcaaatattcgttcctgaaatataataatatgcaattg 17484809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 21515776 - 21515696
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||| |||||||||||  ||||||||| ||||||||| |  ||   |||||||||||||||||||||||||  |||||||    
T  21515776 aatcagctccaaatctctctcttttgctgcaagactcaatcattagaatatttgttcctgaaattaaataacttgcaattg 21515696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 12346308 - 12346363
Alignment:
Q  254 gctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||||||||||| | ||| | |||||||||||||||||||||||||  |||||||    
T  12346308 gctccaagactcaatctttaaaatatttgttcctgaaattaaataacttgcaattg 12346363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 18241988 - 18241925
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    ||||||||||||| | | |||||||||||||||||||| | | ||| ||||| |||||||||||    
T  18241988 aatcaactccaaacccctttcttttgctccaagactcaatctatcaaatattcgttcctgaaat 18241925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 3772577 - 3772639
Alignment:
Q  247 ttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||||||||||| | | |||   |||||||||||||||||||||||||  |||||||    
T  3772577 ttcttttgctccaagactaaatcttttgaatatttgttcctgaaattaaataacttgcaattg 3772639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 9857139 - 9857109
Alignment:
Q  3 tagaatgttccacaagaaaccacgtgctttt 33  Q
    |||||||||||||||||||||||||||||||    
T  9857139 tagaatgttccacaagaaaccacgtgctttt 9857109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 10631147 - 10631110
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  10631147 aatcaactccaaatccctttcttttgctccaagactca 10631110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 10821777 - 10821740
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  10821777 aatcaactccaaatccctttcttttgctccaagactca 10821740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 20617942 - 20617905
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  20617942 aatcaactccaaatccctttcttttgctccaagactca 20617905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 45244643 - 45244708
Alignment:
Q  247 ttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    |||||||||||||||||||| | |||   |||||||||||||||||  ||||||  ||||||||||    
T  45244643 ttcttttgctccaagactcaatctttagaatatttgttcctgaaatataataacttgcaattgtag 45244708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 11889334 - 11889394
Alignment:
Q  207 agattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactca 266  Q
    |||| |||||||||||||| | ||| | |||||| ||||||| ||||||||||||||||||    
T  11889334 agatcttcatatttttggcatgaataagctccaattctcctttcttttgctccaagactca 11889394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 13622055 - 13621971
Alignment:
Q  229 aatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    ||||| |||||| ||||||| |||||||||||||||||| | |||   |||||||||||| ||||  ||||||  ||||||||||    
T  13622055 aatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctaaaatataataacttgcaattgtag 13621971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 16954057 - 16954089
Alignment:
Q  3 tagaatgttccacaagaaaccacgtgcttttat 35  Q
    |||||||||||||||||||||||| ||||||||    
T  16954057 tagaatgttccacaagaaaccacgagcttttat 16954089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 312
Target Start/End: Original strand, 36654626 - 36654726
Alignment:
Q  212 ttcatatttttggcctcaatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgta 311  Q
    ||||||||||||  |  ||||| ||||||||| | |||||||||||||||||||| |   ||  ||||| |||||||||||  ||||| | |||||||||    
T  36654626 ttcatatttttgtaccgaatcagctccaaatccctttcttttgctccaagactcaatccatccaatattcgttcctgaaatataataaaatgcaattgta 36654725  T
Q  312 g 312  Q
    |    
T  36654726 g 36654726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 312
Target Start/End: Complemental strand, 55798154 - 55798054
Alignment:
Q  212 ttcatatttttggcctcaatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgta 311  Q
    ||||||||||||  |  ||||| ||||||||| | |||||||||||||||||||| |   ||  ||||| |||||||||||  ||||| | |||||||||    
T  55798154 ttcatatttttgtaccgaatcagctccaaatccctttcttttgctccaagactcaatccatccaatattcgttcctgaaatataataaaatgcaattgta 55798055  T
Q  312 g 312  Q
    |    
T  55798054 g 55798054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 24371583 - 24371911
Alignment:
Q  1 aatagaatgttccacaagaaaccacgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagcagcaaaa-ggaaagcttcc 99  Q
    |||||||||||||||||||||||| |  ||||||  |  || | ||||||||| |||||||||||||| ||||||| |||||| |||| |||||||| ||    
T  24371583 aatagaatgttccacaagaaaccatggacttttaggt--cagagttacactaaaaaggcatctggatcaggaagcaaaagcagtaaaaaggaaagctgcc 24371680  T
Q  100 agtcgcacacgaccgtgtggctagaagcacgggccgtgcgctcctctctggttgttggccttctttgaaactttgcaggcacg----------------- 182  Q
    ||| || |||| ||||||  || || ||||||| |||||   ||||||||||||||||||||| || |||| ||| |||||||                     
T  24371681 agttgcgcacgtccgtgtcactggaggcacgggtcgtgccaacctctctggttgttggccttccttcaaacattggaggcacgaccaagccatttctagg 24371780  T
Q  183 ---ggttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaagactcattttttcatata 278  Q
       ||| |||||| ||||||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||||| |||||||||||| | |||||||||    
T  24371781 cacggtcgtgccttatatttttgcacaagatcttcatagttttggcctcaatcagctccaaatctcctttctttttctccaagactcaatctttcatata 24371880  T
Q  279 tttgttcctgaaattaaataacaagcaattg 309  Q
     |||||||||||||||||||||  |||||||    
T  24371881 cttgttcctgaaattaaataacttgcaattg 24371911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 194 - 300
Target Start/End: Original strand, 25337444 - 25337551
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    ||||||||| | ||||| ||||||||||||||   ||||| |||||||||||| |||||||||||||||||||| | ||| | |||||||||||||||||    
T  25337444 atatttttgtataagatcttcatatttttggcacaaatcagctccaaatctccattcttttgctccaagactcaatcttttaaatatttgttcctgaaat 25337543  T
Q  293 taaataac 300  Q
     |||||||    
T  25337544 aaaataac 25337551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 309
Target Start/End: Original strand, 23257364 - 23257479
Alignment:
Q  195 tatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaatt 293  Q
    ||||||||| | | |||||||||||| ||| |  |||||||| ||||||||||| ||||| |||||||||||| | ||| | ||||||||||||||||||    
T  23257364 tatttttgctctaaattttcatatttctgggccgaatcaacttcaaatctcctttcttttactccaagactcaatctttgaaatatttgttcctgaaatt 23257463  T
Q  294 aaataacaagcaattg 309  Q
    |||||||  |||||||    
T  23257464 aaataacttgcaattg 23257479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 194 - 300
Target Start/End: Complemental strand, 24321592 - 24321485
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    ||||||||||||   || ||||||||| ||| |  ||||| |||||||||||||| |||||||| |||||||||   ||||| |||||||||||||||||    
T  24321592 atatttttgcacctaatcttcatatttgtgggccgaatcagctccaaatctcctttcttttgctgcaagactcaacctttcaaatatttgttcctgaaat 24321493  T
Q  293 taaataac 300  Q
    ||||||||    
T  24321492 taaataac 24321485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 19124665 - 19124728
Alignment:
Q  247 ttcttttgctccaagactcatt-ttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||||||||  |||||||    
T  19124665 ttcttttgctccaagactcaagcttttcatatatttgttcctgaaattaaataacttgcaattg 19124728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 20851969 - 20851894
Alignment:
Q  235 ctccaaatctcc-ttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||||| |||||||||||||||||||| | ||| | |||||||||| ||||||||||||||  |||||||    
T  20851969 ctccaaatctcccttcttttgctccaagactcaatctttgaaatatttgttcttgaaattaaataacttgcaattg 20851894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 15027075 - 15027019
Alignment:
Q  247 ttcttttgctccaagactcattttttcat-atatttgttcctgaaattaaataacaa 302  Q
    |||||||||||||||||||| | |||||  |||||||||||||||||||||||||||    
T  15027075 ttcttttgctccaagactcaatctttcaccatatttgttcctgaaattaaataacaa 15027019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 23140299 - 23140415
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||  |||| || ||||||||||| | ||| | |||||| |||| || |||||||||||||||||  | ||||| |||||||||||| ||||    
T  23140299 atatttttgcatgagatctttatatttttggcatgaataagctccaattctcatttcttttgctccaagactccatctttcaaatatttgttcctaaaat 23140398  T
Q  293 taaataacaagcaattg 309  Q
     |||||||  |||||||    
T  23140399 aaaataacttgcaattg 23140415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 23552089 - 23552205
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||  |||| || ||||||||||| | ||| | |||||| |||| || |||||||||||||||||  | ||||| |||||||||||| ||||    
T  23552089 atatttttgcatgagatctttatatttttggcatgaataagctccaattctcatttcttttgctccaagactccatctttcaaatatttgttcctaaaat 23552188  T
Q  293 taaataacaagcaattg 309  Q
     |||||||  |||||||    
T  23552189 aaaataacttgcaattg 23552205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 19013365 - 19013419
Alignment:
Q  247 ttcttttgctccaagactcattt-tttcatatatttgttcctgaaattaaataac 300  Q
    ||||||| |||||||||||| |  |||||||||||||||||||||||||||||||    
T  19013365 ttcttttactccaagactcaatcatttcatatatttgttcctgaaattaaataac 19013419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 19124580 - 19124629
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatc 243  Q
    ||||||||| ||||||| |||||||||||| | |||||||||||||||||    
T  19124580 atatttttgtacaagatcttcatatttttgtcttcaatcaactccaaatc 19124629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 309
Target Start/End: Original strand, 41653943 - 41654024
Alignment:
Q  229 aatcaactccaaatc-tccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||| ||||||||| || |||||||||||||||||||| | |||   ||||||||| |||||||||||||||  |||||||    
T  41653943 aatcagctccaaatcctctttcttttgctccaagactcaatctttagaatatttgtttctgaaattaaataacttgcaattg 41654024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 292
Target Start/End: Complemental strand, 15583572 - 15583472
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||| | ||||| ||||||||||||||   ||||| |||||| ||||| || |||||||||||||  || | ||| | ||||||||||||||||    
T  15583572 gatatttttgtataagatcttcatatttttggcacgaatcagctccaattctcctttattttgctccaagatgcaatctttgaaatatttgttcctgaaa 15583473  T
Q  292 t 292  Q
    |    
T  15583472 t 15583472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 44997984 - 44997868
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||  |||| || ||||||||||| | ||| | || ||| ||||||| ||||||||| |||||||  | ||||| |||||||||||| ||||    
T  44997984 atatttttgcatgagatctttatatttttggcatgaataagcttcaattctcctttcttttgctcaaagactccatctttcaaatatttgttcctaaaat 44997885  T
Q  293 taaataacaagcaattg 309  Q
     |||||||  |||||||    
T  44997884 aaaataacttgcaattg 44997868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 311
Target Start/End: Complemental strand, 20281767 - 20281684
Alignment:
Q  229 aatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgta 311  Q
    ||||| |||||| ||||||| |||||||||||||||||| | |||   |||||||||||||||||  ||||||  |||||||||    
T  20281767 aatcagctccaattctcctttcttttgctccaagactcaatgtttagaatatttgttcctgaaatataataacttgcaattgta 20281684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 25858978 - 25859081
Alignment:
Q  207 agattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagca 305  Q
    |||| |||||||||||| | | ||||| || ||| ||||||| |||||||||||||||||  | ||||| ||||||||| || |||| |||||||  |||    
T  25858978 agatcttcatatttttgacatgaatcagcttcaattctcctttcttttgctccaagactccatctttcaaatatttgtttctaaaataaaataacttgca 25859077  T
Q  306 attg 309  Q
    ||||    
T  25859078 attg 25859081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 29568823 - 29568926
Alignment:
Q  207 agattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagca 305  Q
    |||| |||||||||||||| | ||| | |||||| ||||||| | ||||||| |||||||  | ||||| |||||||||||| |||| |||||||  |||    
T  29568823 agatcttcatatttttggcatgaattagctccaattctcctttcctttgctcgaagactccatctttcaaatatttgttcctaaaataaaataacttgca 29568922  T
Q  306 attg 309  Q
    ||||    
T  29568923 attg 29568926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 15027175 - 15027129
Alignment:
Q  186 tgtgcctgatatttttgcacaagattttcatatttttggcctcaatc 232  Q
    ||||||||||||||||||| | ||| ||||||||||||| |||||||    
T  15027175 tgtgcctgatatttttgcataggatcttcatatttttggtctcaatc 15027129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 21344803 - 21344901
Alignment:
Q  212 ttcatatttttggcctcaatcaactccaaatc-tccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||| ||| | ||||| ||||||||| || |||||||||||| ||||| | | |||   |||||||||| ||||||||||||||  |||||||    
T  21344803 ttcatattttaggcatgaatcagctccaaatcctctttcttttgctcctagactgaatctttagaatatttgttcttgaaattaaataacttgcaattg 21344901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 32441743 - 32441841
Alignment:
Q  215 atatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    |||||||||||   ||||| |||||| ||||||| |||||||||||||||||| | |||   |||||||||| ||||||  ||||||  ||||||||||    
T  32441743 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcttgaaatataataacttgcaattgtag 32441841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 24507084 - 24506963
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||||||   ||||| |||||| |||| || ||||||||| |||||||| | |||   |||||||||||||||    
T  24507084 gatatttttgtataagatcttttatatttttggcacgaatcagctccaattctcttttcttttgctcaaagactcaatctttagaatatttgttcctgaa 24506985  T
Q  291 attaaataacaagcaattgtag 312  Q
    ||  ||||||  ||||||||||    
T  24506984 atataataacttgcaattgtag 24506963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 16134561 - 16134629
Alignment:
Q  244 tccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    ||||||||||||||||||||||| | |||   |||||||||||| ||||  ||||||  ||||||||||    
T  16134561 tccttcttttgctccaagactcaatctttacaatatttgttcctaaaatataataacttgcaattgtag 16134629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 309
Target Start/End: Original strand, 25043443 - 25043523
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||| ||||||| | | |||||||||||||||||||| |   ||| |||||||||||||||||  ||||| | |||||||    
T  25043443 aatcagctccaaacccctttcttttgctccaagactcaatccatcaaatatttgttcctgaaatataataatatgcaattg 25043523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 8e-37; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 191 - 312
Target Start/End: Original strand, 24221903 - 24222025
Alignment:
Q  191 ctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctga 289  Q
    |||||||||||||||||||| |||||||||||||||||||| | ||| |||||||||| |||||||||||||||||  | |||| ||||||||||| |||    
T  24221903 ctgatatttttgcacaagatcttcatatttttggcctcaattagctctaaatctcctttcttttgctccaagactcgatctttcttatatttgttcatga 24222002  T
Q  290 aattaaataacaagcaattgtag 312  Q
    |||||||||||||||||||||||    
T  24222003 aattaaataacaagcaattgtag 24222025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 309
Target Start/End: Complemental strand, 24341855 - 24341738
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||| | ||||| ||||||||||||||   ||||| ||||||||||| || ||||||||| |||||||| | ||||| |||||||||||| |||    
T  24341855 gatatttttgtataagatcttcatatttttggcacaaatcagctccaaatctcatttcttttgctctaagactcaatctttcaaatatttgttcctcaaa 24341756  T
Q  292 ttaaataacaagcaattg 309  Q
    |||||||||  |||||||    
T  24341755 ttaaataacttgcaattg 24341738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 24221694 - 24221880
Alignment:
Q  1 aatagaatgttccacaagaaaccacgtgcttttatatatcaaaattacactaagaa-ggcatctggatcgggaagcagaagcagcaaaaggaaagcttcc 99  Q
    |||||||||||||||||||||||| | |||||   |  ||| || || ||||| || |||| || |||| ||||||| |||||||||| |||  |||  |    
T  24221694 aatagaatgttccacaagaaaccatgggcttt---aggtcagaaataaactaaaaaaggcagcttgatcaggaagcaaaagcagcaaacggagtgctgtc 24221790  T
Q  100 agtcgcacacgaccgtgtggctagaagcacgggccgtgcgctcctctctggttgttggccttctttgaaactttgcaggcacgggttgtg 189  Q
    ||| ||||||| ||||||| || ||  ||||||||||  |||||| ||||||  ||||| |||||||||||||||||| |||||||||||    
T  24221791 agttgcacacggccgtgtgtctggagacacgggccgtatgctcctatctggtctttggctttctttgaaactttgcagacacgggttgtg 24221880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 31470171 - 31470232
Alignment:
Q  247 ttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaatt 308  Q
    |||||||||||||||||||| ||||| | |||||||||||| ||||||||||||||||||||    
T  31470171 ttcttttgctccaagactcaatttttgacatatttgttcctaaaattaaataacaagcaatt 31470232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 229 - 309
Target Start/End: Original strand, 14162483 - 14162563
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||| ||||||||| | |||||||||||||||||||| | |||   |||||||||||||||||||||||||  |||||||    
T  14162483 aatcagctccaaatccctttcttttgctccaagactcaatctttagaatatttgttcctgaaattaaataacttgcaattg 14162563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 18007879 - 18007790
Alignment:
Q  212 ttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataac 300  Q
    ||||||||||||||   ||||| |||| |||| |||| |||||||||||||||||| | ||| | ||||||||||||||||| |||||||    
T  18007879 ttcatatttttggcacgaatcagctccgaatcacctttcttttgctccaagactcaatctttgaaatatttgttcctgaaataaaataac 18007790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 14351957 - 14352073
Alignment:
Q  197 tttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaagactcattttttcatatatttgttcctgaaattaa 295  Q
    |||||||| ||||| || ||| ||||||| | ||| | |||||| ||||| |||||||||||||||||||| | |||   |||||||||||||||||  |    
T  14351957 tttttgcataagatctttataattttggcatgaataagctccaattctcccttcttttgctccaagactcaatctttagaatatttgttcctgaaatata 14352056  T
Q  296 ataacaagcaattgtag 312  Q
    |||| | ||||||||||    
T  14352057 ataatacgcaattgtag 14352073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 10070 - 10186
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||  |||| |||||||||||||| | ||| |||||||| | ||| |||||||||||||||||| | | |||   ||||| |||||||||||    
T  10070 atatttttgcatgagatcttcatatttttggcatgaataaactccaattttcctttcttttgctccaagactaaatctttgtaatattcgttcctgaaat 10169  T
Q  293 taaataacaagcaattg 309  Q
      ||||||  |||||||    
T  10170 ataataacttgcaattg 10186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 24967034 - 24966918
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||  |||| || |||||||| |  | ||| | |||||| ||||||| |||||||||||||||||  | ||||| |||||||||||| ||||    
T  24967034 atatttttgcatgagatctttatattttttgtatgaataagctccaattctcctttcttttgctccaagactccatctttcaaatatttgttcctaaaat 24966935  T
Q  293 taaataacaagcaattg 309  Q
     |||||||  |||||||    
T  24966934 aaaataacttgcaattg 24966918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 31470072 - 31470127
Alignment:
Q  188 tgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatc 243  Q
    ||||||||||||||||| |  || |||||||||||||| ||||||| |||||||||    
T  31470072 tgcctgatatttttgcatagaatcttcatatttttggcttcaatcagctccaaatc 31470127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 23222353 - 23222403
Alignment:
Q  250 ttttgctccaagactcattttttcatatatttgttcctgaaattaaataac 300  Q
    ||||||||||||||||| | |||||  |||| |||||||||||||||||||    
T  23222353 ttttgctccaagactcaatctttcaattattcgttcctgaaattaaataac 23222403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 18161717 - 18161653
Alignment:
Q  247 ttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgta 311  Q
    |||||||||||||||||||| | |||   |||||||||||||||||  ||||||  |||||||||    
T  18161717 ttcttttgctccaagactcaatctttagaatatttgttcctgaaatataataacttgcaattgta 18161653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 20263162 - 20263082
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||| ||||||| | | |||||||||||||||||||| | | ||| ||||| |||||||||||  ||||| | |||||||    
T  20263162 aatcagctccaaacccctttcttttgctccaagactcaatctatcaaatattcgttcctgaaatataataatatgcaattg 20263082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 192 - 312
Target Start/End: Complemental strand, 167909 - 167788
Alignment:
Q  192 tgatatttttgcacaagattttcatatttttggcctcaatcaactccaaat-ctccttcttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||| ||  |||||||||||||||||||| | |||||||| ||| |||| |||    
T  167909 tgatatttttgcacaagatcttcatatttttggcctcaatcagctccaaatcctatttcttttgctccaagactcaatctttcatatctttattccagaa 167810  T
Q  291 attaaataacaagcaattgtag 312  Q
    ||||||||||| ||||||||||    
T  167809 attaaataacatgcaattgtag 167788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 191303 - 191335
Alignment:
Q  1 aatagaatgttccacaagaaaccacgtgctttt 33  Q
    |||||||||||||||||||||||||| ||||||    
T  191303 aatagaatgttccacaagaaaccacgggctttt 191335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 5e-32; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 26192026 - 26191892
Alignment:
Q  176 aggcacgggttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttca 274  Q
    ||||| ||| |||| || || |||||||||||| |||||||||||||||||  ||||| |||||||||| ||| |||||||||||||||||| | |||||    
T  26192026 aggcatgggctgtgtctaatgtttttgcacaaggttttcatatttttggcccgaatcacctccaaatcttctttcttttgctccaagactcaatctttca 26191927  T
Q  275 tatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||||||||||||||||||||||||  |||||||    
T  26191926 tatatttgttcctgaaattaaataacttgcaattg 26191892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 299
Target Start/End: Original strand, 16382368 - 16382475
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctc-cttcttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||||||||||| ||||||||||||||   ||||| |||||||||||  |||||||||||||||||||| | ||| | |||||| |||||||||    
T  16382368 gatatttttgcacaagatcttcatatttttggcacaaatcagctccaaatctcatttcttttgctccaagactcaatctttgaaatattttttcctgaaa 16382467  T
Q  292 ttaaataa 299  Q
    ||||||||    
T  16382468 ttaaataa 16382475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 16385230 - 16385343
Alignment:
Q  197 tttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaa 295  Q
    |||||||||||||| |||||||||||||||  ||||| ||||||| ||| || |||||||||||||||||| | ||| | |||||||||||| |||||||    
T  16385230 tttttgcacaagatcttcatatttttggcccaaatcagctccaaacctcatttcttttgctccaagactcaatctttaaaatatttgttcctaaaattaa 16385329  T
Q  296 ataacaagcaattg 309  Q
    |||||  |||||||    
T  16385330 ataacttgcaattg 16385343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 300
Target Start/End: Original strand, 20861094 - 20861207
Alignment:
Q  188 tgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcc 286  Q
    |||||||||||||||||||  || |||||||||||||||  ||||| ||| |||| || || |||||||||||||||||| | ||| | ||||||||||     
T  20861094 tgcctgatatttttgcacataatcttcatatttttggcccgaatcagctcaaaatatcatttcttttgctccaagactcaatctttaaaatatttgttct 20861193  T
Q  287 tgaaattaaataac 300  Q
    ||||||||||||||    
T  20861194 tgaaattaaataac 20861207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 194 - 300
Target Start/End: Original strand, 30819358 - 30819465
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    ||||||||| | ||||| |||||||||||||| | ||||| |||||| |||| || ||||||||| |||||||| | ||||| |||||||||||||||||    
T  30819358 atatttttgtataagatcttcatatttttggcatgaatcagctccaattctcatttcttttgctctaagactcaatctttcaaatatttgttcctgaaat 30819457  T
Q  293 taaataac 300  Q
     |||||||    
T  30819458 aaaataac 30819465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 300
Target Start/End: Complemental strand, 23298644 - 23298519
Alignment:
Q  176 aggcacgggttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttca 274  Q
    |||||||||  ||||||||||||||||||||  ||  ||||||||||  ||  ||||| ||| |||||||||| |||||||||||||| ||| | ||| |    
T  23298644 aggcacgggccgtgcctgatatttttgcacataatcatcatattttttccccaaatcagctctaaatctcctttcttttgctccaagattcaatctttta 23298545  T
Q  275 tatatttgttcctgaaattaaataac 300  Q
     ||||| |||||||||||||||||||    
T  23298544 aatattcgttcctgaaattaaataac 23298519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 15347453 - 15347516
Alignment:
Q  247 ttcttttgctccaagactcattttttcat-atatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||||||||||||| | |||||  ||||||||||||||||||||||||||||||||||    
T  15347453 ttcttttgctccaagactcaatatttcaccatatttgttcctgaaattaaataacaagcaattg 15347516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 25405298 - 25405415
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    ||||||| || | ||||| ||||||||||||||   ||||| |||||||||||||| |||||||||||||||||| | ||| | |||||||||  |||||    
T  25405298 gatatttctgtataagatcttcatatttttggcacaaatcagctccaaatctcctttcttttgctccaagactcaatctttgaaatatttgtttttgaaa 25405397  T
Q  292 ttaaataacaagcaattg 309  Q
    | |||||||  |||||||    
T  25405398 tgaaataacttgcaattg 25405415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 16148749 - 16148865
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||||| |  ||| ||||||| | |  ||||| ||||||||||| || |||||| ||||||||||||| |||   |||||||||||||||||    
T  16148749 atatttttgcacaaaaccttcgtatttttagtccgaatcagctccaaatctcatttcttttgttccaagactcattctttagaatatttgttcctgaaat 16148848  T
Q  293 taaataacaagcaattg 309  Q
    ||||||||  |||||||    
T  16148849 taaataacttgcaattg 16148865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 13799786 - 13799857
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataac 300  Q
    ||||| ||||||||| | |||||||||||||||||||| | |||   |||||||||||||||||||||||||    
T  13799786 aatcagctccaaatccctttcttttgctccaagactcaatctttataatatttgttcctgaaattaaataac 13799857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 20899735 - 20899798
Alignment:
Q  247 ttcttttgctccaagactcatt-ttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||  |||||||    
T  20899735 ttcttttgctacaagactcaatattttcatatatttgttcctgaaattaaataacttgcaattg 20899798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 21918600 - 21918546
Alignment:
Q  189 gcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatc 243  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||| |||||||||    
T  21918600 gcctgatatttttgcacatgatcttcatatttttggcctgaatcagctccaaatc 21918546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 20412008 - 20411892
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||  |||| || ||||||||||| | ||| | |||||| |||| || |||||||||||||||||  | ||||| |||||||||||| ||||    
T  20412008 atatttttgcatgagatctttatatttttggcatgaataagctccaattctcgtttcttttgctccaagactccatctttcaaatatttgttcctaaaat 20411909  T
Q  293 taaataacaagcaattg 309  Q
     |||||||  |||||||    
T  20411908 aaaataacttgcaattg 20411892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 21918502 - 21918446
Alignment:
Q  247 ttcttttgctccaagactcattttttcat-atatttgttcctgaaattaaataacaa 302  Q
    ||||| |||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  21918502 ttcttctgctccaagactcaatttttcaccatatttgttcctgaaattaaataacaa 21918446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 311
Target Start/End: Complemental strand, 48256063 - 48255943
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||| ||   ||||||||| || ||||||| |||||||||||||||||| | |||   |||||||||||||||    
T  48256063 gatatttttgtataagatcttttatattttttgcacgaatcaactctaattctcctttcttttgctccaagactcaatctttagaatatttgttcctgaa 48255964  T
Q  291 attaaataacaagcaattgta 311  Q
    ||| ||||||  |||||||||    
T  48255963 atttaataacttgcaattgta 48255943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 28764221 - 28764283
Alignment:
Q  247 ttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||||||| ||||| | |||||  ||||||||||||||||||||||||  |||||||    
T  28764221 ttcttttgctccaaaactcaatctttcaattatttgttcctgaaattaaataacttgcaattg 28764283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 292
Target Start/End: Complemental strand, 44538015 - 44537914
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||||||   | |||||||||| ||||||| |||||||||||||||||| | |||   |||||||||||||||    
T  44538015 gatatttttgtataagatcttttatatttttggcacgattcaactccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctgaa 44537916  T
Q  291 at 292  Q
    ||    
T  44537915 at 44537914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 312
Target Start/End: Complemental strand, 16431318 - 16431198
Alignment:
Q  194 atatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    ||||||||| | ||||| ||| |||||||||||   ||||| |||||| ||||||| ||||||||||||||| || | |||   ||||||||||||||||    
T  16431318 atatttttgtataagatcttttatatttttggcacgaatcagctccaattctcctttcttttgctccaagacccaatctttagaatatttgttcctgaaa 16431219  T
Q  292 ttaaataacaagcaattgtag 312  Q
    |  ||||||  ||||||||||    
T  16431218 tataataacttgcaattgtag 16431198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 312
Target Start/End: Complemental strand, 17716502 - 17716382
Alignment:
Q  194 atatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    ||||||||| | ||||| ||| |||||||||||   ||||| |||||| || |||| |||||||||||||||||| | |||   ||||||||||||||||    
T  17716502 atatttttgtataagatcttttatatttttggcacgaatcagctccaattcgcctttcttttgctccaagactcaatctttagaatatttgttcctgaaa 17716403  T
Q  292 ttaaataacaagcaattgtag 312  Q
    |  ||||||  ||||||||||    
T  17716402 tataataacttgcaattgtag 17716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 39286905 - 39286973
Alignment:
Q  197 tttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaagact 264  Q
    ||||||||  |||| |||||||||||||| | ||| | |||||||||||| ||||||||||||||||||    
T  39286905 tttttgcatgagatcttcatatttttggcatgaataagctccaaatctcctttcttttgctccaagact 39286973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 52236189 - 52236309
Alignment:
Q  194 atatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    ||||||||| | ||||| ||| |||||||||||   ||||| |||||| ||||||| |||||||||||||||| | | |||   ||||||||||||||||    
T  52236189 atatttttgtataagatcttttatatttttggcacgaatcagctccaattctcctttcttttgctccaagactgaatctttagaatatttgttcctgaaa 52236288  T
Q  292 ttaaataacaagcaattgtag 312  Q
    |  ||||| | ||||||||||    
T  52236289 tataataatatgcaattgtag 52236309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 2977548 - 2977603
Alignment:
Q  188 tgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatc 243  Q
    |||||||||||||| |||| ||| |||||||||||| | ||||||| |||||||||    
T  2977548 tgcctgatatttttacacatgatcttcatatttttgtcttcaatcagctccaaatc 2977603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 8648614 - 8648545
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaaga 262  Q
    |||||||||||  |||| |||||||||||||| | ||| | |||||| ||||| ||||||||||||||||    
T  8648614 atatttttgcatgagatcttcatatttttggcatgaataagctccaattctcctttcttttgctccaaga 8648545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 38045106 - 38045069
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  38045106 aatcaactccaaatccctttcttttgctccaagactca 38045069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 309
Target Start/End: Original strand, 41546080 - 41546202
Alignment:
Q  188 tgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcc 286  Q
    |||||||||||||| ||||  || || |||||||||| || ||||| ||| |||||||||| |||||||||||||||| | | ||||| |||||||||||    
T  41546080 tgcctgatattttttcacagaatctttatatttttggtctgaatcagctcaaaatctcctttcttttgctccaagactaaatctttcaaatatttgttcc 41546179  T
Q  287 tgaaattaaataacaagcaattg 309  Q
    ||||||||||||||  |||||||    
T  41546180 tgaaattaaataacttgcaattg 41546202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 16703589 - 16703455
Alignment:
Q  176 aggcacgggttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttca 274  Q
    ||||||||| |||| || |||||||||||||  || ||||||| |||  ||  ||||| |||||||||||||| ||||| |||||||||||| | ||  |    
T  16703589 aggcacgggctgtgtctaatatttttgcacagaatcttcatatgtttaccccgaatcagctccaaatctcctttcttttactccaagactcaatcttaga 16703490  T
Q  275 tatatttgttcctgaaattaaataacaagcaattg 309  Q
     |||||||||||||||||||||||||  |||||||    
T  16703489 aatatttgttcctgaaattaaataacttgcaattg 16703455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 8531710 - 8531594
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    ||||||||| || | || ||| |||||||||||  ||||  |||||||||||||| |||||||||||| ||||| | ||||| |||||||||||||||||    
T  8531710 atatttttgtaccaaatcttcgtatttttggcccaaatcgcctccaaatctcctttcttttgctccaaaactcaatctttcaaatatttgttcctgaaat 8531611  T
Q  293 taaataacaagcaattg 309  Q
    ||| ||||  |||||||    
T  8531610 taattaacttgcaattg 8531594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 11870135 - 11870233
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||||| | || ||| |||||||||||  ||||| ||||| |||||||| |||||||||||||||||| | ||| | ||||||||||||||||    
T  11870135 atatttttgcaccaaatcttcgtatttttggcccgaatcagctccagatctcctttcttttgctccaagactcaatctttgaaatatttgttcctgaaa 11870233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 8686208 - 8686306
Alignment:
Q  212 ttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||||||||  ||||| ||||||||| |||| ||||||||||| ||| || | ||||| |||||||||||||||||  ||||||  |||||||    
T  8686208 ttcatatttttggcccgaatcagctccaaatcacctttcttttgctccaggacacaatctttcaaatatttgttcctgaaatataataacttgcaattg 8686306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 14495133 - 14495254
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| ||||||||||| | ||||| |||||| |||| || |||||||||||||||||| | |||   |||||||||||||||    
T  14495133 gatatttttgtataagatcttttatatttttggcatgaatcagctccaattctcgtttcttttgctccaagactcaatctttagaatatttgttcctgaa 14495232  T
Q  291 attaaataacaagcaattgtag 312  Q
    ||  ||||||  ||||||||||    
T  14495233 atataataacttgcaattgtag 14495254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 3250394 - 3250514
Alignment:
Q  194 atatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    ||||||||| | ||||| ||| |||||||||||   ||||| |||||| ||||||| |||||||||||||||||| | |||   ||||||||||||||||    
T  3250394 atatttttgtataagatcttttatatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctgaaa 3250493  T
Q  292 ttaaataacaagcaattgtag 312  Q
    |  ||||| | ||||||||||    
T  3250494 tataataatatgcaattgtag 3250514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 285
Target Start/End: Complemental strand, 13601494 - 13601402
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttc 285  Q
    ||||||||||| ||||| || ||||||||||| | ||| | |||||| ||||||| |||||||||||||||||  | ||||| ||||||||||    
T  13601494 atatttttgcataagatctttatatttttggcatgaataagctccaattctcctttcttttgctccaagactccatctttcaaatatttgttc 13601402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 25766030 - 25766146
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||  |||| || ||||||||||| | ||| | |||||| ||||||| |||||||| ||||||||  | ||||| |||||||||||| ||||    
T  25766030 atatttttgcatgagatctttatatttttggcatgaataagctccaattctcctttcttttgcttcaagactccatctttcaaatatttgttcctaaaat 25766129  T
Q  293 taaataacaagcaattg 309  Q
     |||||||  |||||||    
T  25766130 aaaataacttgcaattg 25766146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 229 - 309
Target Start/End: Original strand, 42244883 - 42244963
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||| || |||||| | |||||||||||||||||||| | |||   |||||||||||||||||||||||||  |||||||    
T  42244883 aatcagcttcaaatccctttcttttgctccaagactcaatctttagaatatttgttcctgaaattaaataacttgcaattg 42244963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 309
Target Start/End: Complemental strand, 22038668 - 22038569
Alignment:
Q  211 tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||||||||||||| | ||  | |||||| ||||||| |||||||||||||||||  | ||||| |||||||||||| |||| |||||||  |||||||    
T  22038668 tttcatatttttggcatgaacaagctccaattctcctttcttttgctccaagactccatctttcaaatatttgttcctaaaataaaataacttgcaattg 22038569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 27993182 - 27993245
Alignment:
Q  247 ttcttttgctccaagactcattttttcat-atatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||||||||||| | | |||||  ||||||||||||||||||||||||||| ||||||    
T  27993182 ttcttttgctccaagactaaatctttcaacatatttgttcctgaaattaaataacaaacaattg 27993245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 14661101 - 14661219
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||||||   ||||| |||||| ||||||| |||||||||||||||||| | |||   |||||||||||||||    
T  14661101 gatatttttgtataagatcttttatatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctgaa 14661200  T
Q  291 attaaataacaagcaattg 309  Q
    ||  ||||||  |||||||    
T  14661201 atataataacttgcaattg 14661219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 17041486 - 17041405
Alignment:
Q  229 aatcaactccaaatc-tccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||| ||||||||| || |||||||||||||||||||| | |||   ||||||| |||||||||||||||||  |||||||    
T  17041486 aatcagctccaaatcctctttcttttgctccaagactcaatctttagaatatttgatcctgaaattaaataacttgcaattg 17041405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 34053901 - 34054018
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    |||||||||| |  |||| |||||||||||||| | ||||| |||||| |||| || | ||| |||||||||||  | ||||| |||||||||||| |||    
T  34053901 gatatttttgtatgagatcttcatatttttggcatgaatcagctccaattctcatttccttttctccaagactccatctttcaaatatttgttcctaaaa 34054000  T
Q  292 ttaaataacaagcaattg 309  Q
    | |||||||  |||||||    
T  34054001 taaaataacttgcaattg 34054018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 19567360 - 19567452
Alignment:
Q  218 tttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||| | ||| | |||||| ||||||| |||||||||||||||||  | ||||| |||||||||||| |||| |||||||  |||||||    
T  19567360 tttttggcatgaataagctccaattctcctttcttttgctccaagactccatctttcaaatatttgttcctaaaataaaataacttgcaattg 19567452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 3245392 - 3245490
Alignment:
Q  215 atatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    |||||||||||   ||||| |||||| ||||||| ||||| |||||||||||| | |||   |||||||||||||||||  ||||| | ||||||||||    
T  3245392 atatttttggcacgaatcagctccaattctcctttcttttactccaagactcaatctttagaatatttgttcctgaaatataataatatgcaattgtag 3245490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 308
Target Start/End: Complemental strand, 14826233 - 14826172
Alignment:
Q  246 cttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaatt 308  Q
    ||||||||||||||||||| | |||  |  ||||||||||||||||| |||||||||||||||    
T  14826233 cttcttttgctccaagacttaatttcacc-atatttgttcctgaaataaaataacaagcaatt 14826172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 17050522 - 17050424
Alignment:
Q  212 ttcatatttttggcctcaatcaactccaaatc-tccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||| |||   ||||| ||||||||| || ||||||| |||||||||| | | |||   |||||||||||||||||||||||||  |||||||    
T  17050522 ttcatattttaggcacgaatcagctccaaatcctctttctttttctccaagacttaatctttagaatatttgttcctgaaattaaataacttgcaattg 17050424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 3226614 - 3226577
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  3226614 aatcaactccaaatccctttcttttgctccaagactca 3226577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 4829833 - 4829796
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  4829833 aatcaactccaaatccctttcttttgctccaagactca 4829796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 7908275 - 7908194
Alignment:
Q  229 aatcaactccaaatc-tccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||| ||||||||| || ||||||| ||| |||||||| | |||   |||||||||||||||||||||||||  |||||||    
T  7908275 aatcagctccaaatcctctttcttttactcgaagactcaatctttagaatatttgttcctgaaattaaataacttgcaattg 7908194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 12781889 - 12781926
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  12781889 aatcaactccaaatccctttcttttgctccaagactca 12781926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 24696636 - 24696599
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  24696636 aatcaactccaaatccctttcttttgctccaagactca 24696599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 27880156 - 27880123
Alignment:
Q  1 aatagaatgttccacaagaaaccacgtgctttta 34  Q
    |||||||||||||||||||||||||| |||||||    
T  27880156 aatagaatgttccacaagaaaccacgggctttta 27880123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 40846532 - 40846487
Alignment:
Q  247 ttcttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||||||||||| | | ||| |||||||||||||||||    
T  40846532 ttcttttgctccaagactcaatctatcaaatatttgttcctgaaat 40846487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 14659067 - 14658987
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    ||||| ||||||||| | ||||||||||| |||||||| | |||   |||||  ||||||||||||||||||  |||||||    
T  14659067 aatcagctccaaatccctttcttttgctcaaagactcaatctttagaatattcattcctgaaattaaataacttgcaattg 14658987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1559 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 1191 - 1075
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||| | || ||| ||||||||||   ||||| |||||||||||||| |||||||||||||||||| | ||| | |||||||||||||||||    
T  1191 atatttttgcaccaaatcttcgtatttttggctcgaatcagctccaaatctcctttcttttgctccaagactcaatctttgaaatatttgttcctgaaat 1092  T
Q  293 taaataacaagcaattg 309  Q
    ||||||||  |||||||    
T  1091 taaataacttgcaattg 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 298
Target Start/End: Original strand, 23073 - 23195
Alignment:
Q  176 aggcacgggttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttca 274  Q
    ||||||||| |||| ||| |||||||||| || || |||||||||||||||  ||||| ||||||||| |||| ||||||||||||||| || | ||||     
T  23073 aggcacgggctgtgtctg-tatttttgcataaaatcttcatatttttggcccgaatcagctccaaatcacctttcttttgctccaagacgcaatctttcg 23171  T
Q  275 tatatttgttcctgaaattaaata 298  Q
     |||||||||||||||||||||||    
T  23172 aatatttgttcctgaaattaaata 23195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 3108 - 3043
Alignment:
Q  247 ttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||| ||||||||||||||||    
T  3108 ttcttttgctccaagactcaatctttcatatatttcttcctgaaattaattaacaagcaattgtag 3043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3412 - 3325
Alignment:
Q  1 aatagaatgttccacaagaaaccacgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagcagcaaaagg 90  Q
    |||||||||||||||||||||||| | |||||  ||  ||| ||||||||| | |||||| || |||| ||||||| |||||||||||||    
T  3412 aatagaatgttccacaagaaaccatgagcttt--taggtcagaattacacttaaaaggcagctagatcaggaagcaaaagcagcaaaagg 3325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 3220 - 3152
Alignment:
Q  175 caggcacgggttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatc 243  Q
    |||||||||| |||| ||||||||||||  || ||| |||||||||||| | ||||||| |||||||||    
T  3220 caggcacgggctgtgtctgatatttttgtgcaggatcttcatatttttgtcttcaatcagctccaaatc 3152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 3273 - 3208
Alignment:
Q  247 ttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||| ||||||||||||||||    
T  3273 ttcttttgctccaagactcaatctttcatatatttcttcctgaaattaattaacaagcaattgtag 3208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3577 - 3490
Alignment:
Q  1 aatagaatgttccacaagaaaccacgtgcttttatatatcaaaattacactaagaaggcatctggatcgggaagcagaagcagcaaaagg 90  Q
    |||||||||||||||||||||||| | |||||  ||  ||| ||||||||| | |||||| || |||| ||||||| |||||||||||||    
T  3577 aatagaatgttccacaagaaaccatgagcttt--taggtcagaattacacttaaaaggcagctagatcaggaagcaaaagcagcaaaagg 3490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 3385 - 3317
Alignment:
Q  175 caggcacgggttgtgcctgatatttttgcacaagattttcatatttttggcctcaatcaactccaaatc 243  Q
    |||||||||| |||| ||||||||||||  || ||| |||||||||||| | ||||||| |||||||||    
T  3385 caggcacgggctgtgtctgatatttttgtgcaggatcttcatatttttgtcttcaatcagctccaaatc 3317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 520493 - 520420
Alignment:
Q  237 ccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||||| |||||||||||||||||| | ||| | |||||||||||||||||||||||||  |||||||    
T  520493 ccaaatctcctttcttttgctccaagactcaatctttaaaatatttgttcctgaaattaaataacttgcaattg 520420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 207 - 309
Target Start/End: Original strand, 22708 - 22811
Alignment:
Q  207 agattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagca 305  Q
    |||| |||||||||||| | | ||||| |||||||||||||| ||||||||| |||||||  | ||||| |||||||||||| |||| |||||||  |||    
T  22708 agatcttcatatttttgacatgaatcagctccaaatctcctttcttttgctcaaagactccatctttcaaatatttgttcctaaaataaaataacttgca 22807  T
Q  306 attg 309  Q
    ||||    
T  22808 attg 22811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 292
Target Start/End: Original strand, 40 - 141
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| |||||||||||||||   ||||| |||||| ||||||| |||||||||||||||||| | |||   |||||||||||||||    
T  40 gatatttttgtataagatctttcatatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctgaa 139  T
Q  291 at 292  Q
    ||    
T  140 at 141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 26748 - 26627
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||||||   |||||||||||| ||||||| |||||||||||||||||| | |||   |||||||||||| ||    
T  26748 gatatttttgtataagatcttttatatttttggcacgaatcaactccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctaaa 26649  T
Q  291 attaaataacaagcaattgtag 312  Q
    ||  ||||| | ||||||||||    
T  26648 atataataatatgcaattgtag 26627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 21449 - 21376
Alignment:
Q  193 gatatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactca 266  Q
    |||||||||| | | ||| ||||||||||||||   |||||||||||| ||||||| ||||||||||||||||||    
T  21449 gatatttttgtatatgatcttcatatttttggcacaaatcaactccaa-tctcctttcttttgctccaagactca 21376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 10126 - 10246
Alignment:
Q  194 atatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaa 291  Q
    ||||||||| | ||||| ||| |||||||||||   ||||| |||||| ||||||| |||||||||||||||||| | ||| | |||||||||||| |||    
T  10126 atatttttgtataagatcttttatatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttaaaatatttgttcctaaaa 10225  T
Q  292 ttaaataacaagcaattgtag 312  Q
    |  ||||||  ||||||||||    
T  10226 tataataacttgcaattgtag 10246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 13944 - 13828
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||| | || ||| | ||||| |||  ||||| |||||||||||||| |||||||||||||| | | | ||||| ||||||||| || ||||    
T  13944 atatttttgcaccaaatcttcgtgtttttagccaaaatcagctccaaatctcctttcttttgctccaagaataaatctttcaaatatttgttactaaaat 13845  T
Q  293 taaataacaagcaattg 309  Q
    ||||||||  |||||||    
T  13844 taaataacttgcaattg 13828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 44567 - 44683
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||  |||| || ||| ||||||| | ||| | |||||| ||||||| |||||||||||||||||  | ||||| |||||||||||| ||||    
T  44567 atatttttgcatgagatctttataattttggcatgaataagctccaattctcctttcttttgctccaagactccatctttcaaatatttgttcctaaaat 44666  T
Q  293 taaataacaagcaattg 309  Q
     |||||||  |||||||    
T  44667 aaaataacttgcaattg 44683  T

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Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 32395 - 32451
Alignment:
Q  247 ttcttttgctccaagactcattttttcat-atatttgttcctgaaattaaataacaa 302  Q
    |||||||||||||||||||| | |||||  |||||||||||||||||||||||||||    
T  32395 ttcttttgctccaagactcaatctttcaccatatttgttcctgaaattaaataacaa 32451  T

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Target: scaffold0035; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 33779 - 33829
Alignment:
Q  253 tgctccaagactcattttttcat-atatttgttcctgaaattaaataacaa 302  Q
    |||||||||||||| | |||||  |||||||||||||||||||||||||||    
T  33779 tgctccaagactcaatctttcaccatatttgttcctgaaattaaataacaa 33829  T

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Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 292
Target Start/End: Complemental strand, 48561 - 48462
Alignment:
Q  195 tatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||| | ||||| |||||||||||||||   ||||| |||||| ||||||| |||||||||||||||||| | |||   |||||||||||||||||    
T  48561 tatttttgtataagatctttcatatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctgaaat 48462  T

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Target: scaffold0371 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 9407 - 9528
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| |||||||||||||||   |||||||||||| ||||| ||||||| || ||||||||| | |||   |||||| ||||||||    
T  9407 gatatttttgtataagatctttcatatttttggcacgaatcaactccaattctcctttctttttctgcaagactcaatctttagaatatttattcctgaa 9506  T
Q  291 attaaataacaagcaattgtag 312  Q
    ||  ||||||  ||||||||||    
T  9507 atataataacttgcaattgtag 9528  T

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Target: scaffold0092 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 292
Target Start/End: Original strand, 19850 - 19949
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||  |||| || ||||||||||| | ||| | |||||| ||||||| ||||| |||||||||||  | ||||| |||||||||||| ||||    
T  19850 atatttttgcatgagatctttatatttttggcatgaataagctccaattctcctttctttttctccaagactccatctttcaaatatttgttcctaaaat 19949  T

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Target: scaffold0031 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 102201 - 102138
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    ||||| ||||||||||| |||||||||||||||||||| |   ||| ||||| |||||||||||    
T  102201 aatcagctccaaatctctttcttttgctccaagactcaatccatcaaatattcgttcctgaaat 102138  T

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Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 23037 - 22916
Alignment:
Q  193 gatatttttgcacaagat-tttcatatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaa 290  Q
    |||||||||| | ||||| ||| |||||||||||   ||||| || ||| ||||||| |||||||||||||||||| | |||   |||||||||| ||||    
T  23037 gatatttttgtataagatcttttatatttttggcacgaatcagctgcaattctcctttcttttgctccaagactcaatctttagaatatttgttcgtgaa 22938  T
Q  291 attaaataacaagcaattgtag 312  Q
    ||  ||||| | ||||||||||    
T  22937 atataataatatgcaattgtag 22916  T

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Target: scaffold1225 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 2065 - 2003
Alignment:
Q  247 ttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||||||||||||| | |||||  |||| |||| |||||||||||||  ||||||||    
T  2065 ttcttttgctccaagactcaatctttcaattattcgttcttgaaattaaataaatagcaattg 2003  T

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Target: scaffold0916 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 312
Target Start/End: Complemental strand, 3240 - 3142
Alignment:
Q  215 atatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    |||||||||||   ||||| |||||| ||||||| |||||||||||||||||| | |||   |||||||||| ||||||  ||||||  ||||||||||    
T  3240 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcatgaaatataataacttgcaattgtag 3142  T

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Target: scaffold0447 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 312
Target Start/End: Complemental strand, 6190 - 6092
Alignment:
Q  215 atatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    |||||||||||   ||||| |||||| ||||||| |||||||||||||||||| | |||   ||||||||| |||||||  ||||| | ||||||||||    
T  6190 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgtttctgaaatataataatatgcaattgtag 6092  T

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Target: scaffold0447; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 312
Target Start/End: Complemental strand, 10804 - 10706
Alignment:
Q  215 atatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    |||||||||||   ||||| |||||| ||||||| |||||||||||||||||| | |||   ||||||||| |||||||  ||||| | ||||||||||    
T  10804 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgtttctgaaatataataatatgcaattgtag 10706  T

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Target: scaffold0383 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 312
Target Start/End: Complemental strand, 8799 - 8701
Alignment:
Q  215 atatttttggcctcaatcaactccaaatctcctt-cttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    |||||||||||   ||||| |||||| ||||||| |||||||||||||||||| | |||   ||||||||| |||||||  ||||| | ||||||||||    
T  8799 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgtttctgaaatataataatatgcaattgtag 8701  T

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Target: scaffold0038 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 22371 - 22429
Alignment:
Q  251 tttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattg 309  Q
    |||||||||||||||| ||||| |  ||||| ||||||||||||||||||  |||||||    
T  22371 tttgctccaagactcaattttttaattatttattcctgaaattaaataacttgcaattg 22429  T

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Target: scaffold0113 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 46899 - 46936
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  46899 aatcaactccaaatccctttcttttgctccaagactca 46936  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 238372 - 238335
Alignment:
Q  229 aatcaactccaaatctccttcttttgctccaagactca 266  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  238372 aatcaactccaaatccctttcttttgctccaagactca 238335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 28841 - 28776
Alignment:
Q  247 ttcttttgctccaagactcattttttcatatatttgttcctgaaattaaataacaagcaattgtag 312  Q
    |||||||||||||||||||| | |||   |||||||||||||||||  ||||||  ||||||||||    
T  28841 ttcttttgctccaagactcaatctttagaatatttgttcctgaaatataataacttgcaattgtag 28776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 9193 - 9309
Alignment:
Q  194 atatttttgcacaagattttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaagactcattttttcatatatttgttcctgaaat 292  Q
    |||||||||||  |||| ||||||||| |||| | ||| | |||||| ||||| |||||||||||||||||| | | |||   ||||| |||||||||||    
T  9193 atatttttgcatgagatcttcatatttatggcatgaataagctccaattctcctttcttttgctccaagactaaatcttttgaatattcgttcctgaaat 9292  T
Q  293 taaataacaagcaattg 309  Q
      ||||||  |||||||    
T  9293 ataataacttgcaattg 9309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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