View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0834_low_16 (Length: 373)

Name: NF0834_low_16
Description: NF0834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0834_low_16
NF0834_low_16
[»] chr5 (66 HSPs)
chr5 (221-347)||(39698545-39698672)
chr5 (222-347)||(7677709-7677835)
chr5 (222-347)||(21522754-21522880)
chr5 (222-347)||(21533320-21533446)
chr5 (239-344)||(21542037-21542143)
chr5 (236-347)||(19579705-19579817)
chr5 (223-345)||(3966509-3966632)
chr5 (226-344)||(30183556-30183675)
chr5 (236-347)||(15382481-15382590)
chr5 (222-347)||(37328775-37328899)
chr5 (222-347)||(31084327-31084447)
chr5 (277-344)||(21351889-21351957)
chr5 (220-343)||(30098334-30098458)
chr5 (236-344)||(17088291-17088396)
chr5 (225-332)||(18592093-18592200)
chr5 (293-347)||(21191056-21191111)
chr5 (226-343)||(36642696-36642813)
chr5 (223-332)||(6401518-6401627)
chr5 (267-332)||(21814281-21814346)
chr5 (293-344)||(6247629-6247681)
chr5 (222-345)||(11685945-11686068)
chr5 (285-333)||(12199949-12199997)
chr5 (276-343)||(13287383-13287450)
chr5 (222-347)||(21576685-21576800)
chr5 (284-347)||(41633739-41633803)
chr5 (273-347)||(22299460-22299535)
chr5 (222-344)||(40131628-40131751)
chr5 (222-293)||(43564929-43565000)
chr5 (283-344)||(22423802-22423864)
chr5 (294-347)||(42893364-42893418)
chr5 (293-333)||(15884007-15884047)
chr5 (222-345)||(32766872-32766996)
chr5 (225-293)||(39268541-39268609)
chr5 (222-345)||(41091186-41091310)
chr5 (290-359)||(6471886-6471954)
chr5 (262-333)||(12641693-12641764)
chr5 (222-293)||(32630675-32630746)
chr5 (224-345)||(43001806-43001922)
chr5 (297-346)||(7218271-7218321)
chr5 (293-346)||(8420032-8420086)
chr5 (287-344)||(10298576-10298634)
chr5 (298-347)||(14674273-14674323)
chr5 (276-345)||(6035489-6035558)
chr5 (222-267)||(15086552-15086597)
chr5 (236-332)||(23015938-23016028)
chr5 (221-293)||(16304365-16304437)
chr5 (220-292)||(17123097-17123168)
chr5 (278-344)||(30135320-30135390)
chr5 (293-333)||(33178044-33178084)
chr5 (297-343)||(24906305-24906352)
chr5 (293-343)||(28588674-28588725)
chr5 (275-333)||(41995490-41995546)
chr5 (287-344)||(5894827-5894885)
chr5 (293-347)||(14422908-14422961)
chr5 (275-333)||(21319927-21319985)
chr5 (222-288)||(27932288-27932354)
chr5 (221-271)||(35017113-35017163)
chr5 (222-341)||(14873527-14873641)
chr5 (295-347)||(17177025-17177078)
chr5 (293-345)||(30502388-30502441)
chr5 (293-345)||(30542731-30542784)
chr5 (301-344)||(4105264-4105310)
chr5 (289-333)||(16374338-16374382)
chr5 (290-345)||(36838549-36838605)
chr5 (222-270)||(38464313-38464361)
chr5 (236-299)||(43554568-43554631)
[»] chr8 (66 HSPs)
chr8 (222-347)||(22651980-22652106)
chr8 (222-347)||(29510233-29510359)
chr8 (222-344)||(15816058-15816181)
chr8 (222-343)||(11927015-11927137)
chr8 (223-344)||(29447040-29447162)
chr8 (222-346)||(8343321-8343446)
chr8 (264-344)||(2572027-2572108)
chr8 (222-347)||(22197671-22197797)
chr8 (283-363)||(25566831-25566910)
chr8 (222-345)||(28745504-28745628)
chr8 (222-343)||(4673354-4673476)
chr8 (222-343)||(11944673-11944795)
chr8 (222-347)||(21465416-21465542)
chr8 (219-344)||(27067228-27067350)
chr8 (222-329)||(29447467-29447574)
chr8 (293-347)||(24613525-24613579)
chr8 (220-332)||(11803279-11803391)
chr8 (282-347)||(13436953-13437019)
chr8 (222-332)||(26902104-26902214)
chr8 (293-350)||(30077387-30077445)
chr8 (294-343)||(31557005-31557054)
chr8 (293-344)||(4948659-4948711)
chr8 (222-333)||(6065586-6065697)
chr8 (292-346)||(8342977-8343032)
chr8 (222-293)||(36450694-36450765)
chr8 (220-363)||(16641907-16642043)
chr8 (265-345)||(24362173-24362255)
chr8 (222-332)||(18964197-18964309)
chr8 (221-298)||(34450960-34451037)
chr8 (222-333)||(24858031-24858135)
chr8 (296-347)||(25192350-25192402)
chr8 (295-342)||(40332200-40332248)
chr8 (226-293)||(5813640-5813707)
chr8 (293-343)||(20873077-20873128)
chr8 (245-315)||(29655930-29656000)
chr8 (273-345)||(4611540-4611613)
chr8 (282-343)||(5307069-5307130)
chr8 (277-345)||(7442851-7442920)
chr8 (222-293)||(3951476-3951547)
chr8 (293-347)||(5813596-5813651)
chr8 (288-342)||(17468503-17468558)
chr8 (294-344)||(20679396-20679447)
chr8 (293-347)||(22595998-22596053)
chr8 (293-343)||(24669441-24669492)
chr8 (289-347)||(30271287-30271346)
chr8 (294-343)||(4298887-4298937)
chr8 (222-256)||(11833935-11833969)
chr8 (299-333)||(18407738-18407772)
chr8 (236-282)||(22943303-22943349)
chr8 (222-256)||(25566915-25566949)
chr8 (295-344)||(26434187-26434237)
chr8 (222-304)||(28819239-28819321)
chr8 (223-293)||(43737752-43737822)
chr8 (224-293)||(926730-926799)
chr8 (293-345)||(3025557-3025610)
chr8 (224-293)||(3025599-3025668)
chr8 (222-275)||(8343033-8343086)
chr8 (293-345)||(13844596-13844649)
chr8 (223-304)||(24205749-24205830)
chr8 (236-344)||(24727695-24727806)
chr8 (293-345)||(34897091-34897144)
chr8 (283-347)||(35519797-35519862)
chr8 (236-293)||(40332239-40332296)
chr8 (299-343)||(41831946-41831991)
chr8 (276-343)||(28384977-28385045)
chr8 (301-344)||(36450762-36450806)
[»] chr7 (68 HSPs)
chr7 (222-347)||(24339646-24339772)
chr7 (236-350)||(26033404-26033519)
chr7 (221-333)||(2334269-2334380)
chr7 (222-347)||(5409771-5409891)
chr7 (223-344)||(11665370-11665492)
chr7 (222-359)||(9778494-9778624)
chr7 (224-343)||(9408265-9408385)
chr7 (236-345)||(32308126-32308236)
chr7 (221-344)||(25822662-25822786)
chr7 (222-347)||(43027404-43027524)
chr7 (219-344)||(32093951-32094073)
chr7 (245-333)||(21560522-21560610)
chr7 (223-326)||(4794915-4795018)
chr7 (220-347)||(21930633-21930760)
chr7 (236-344)||(7058433-7058540)
chr7 (222-343)||(7438714-7438836)
chr7 (227-347)||(13770695-13770810)
chr7 (284-343)||(18039006-18039067)
chr7 (292-344)||(3991331-3991384)
chr7 (276-341)||(11272569-11272637)
chr7 (222-293)||(15680857-15680928)
chr7 (294-347)||(11061077-11061131)
chr7 (289-350)||(18215182-18215244)
chr7 (236-344)||(6630855-6630964)
chr7 (244-344)||(11831439-11831540)
chr7 (289-344)||(27945048-27945104)
chr7 (222-293)||(598256-598327)
chr7 (245-343)||(6028633-6028732)
chr7 (273-343)||(15902830-15902901)
chr7 (222-293)||(21864856-21864927)
chr7 (293-347)||(25481906-25481961)
chr7 (265-343)||(26329354-26329433)
chr7 (275-344)||(13300417-13300487)
chr7 (223-293)||(20549839-20549909)
chr7 (223-293)||(32287404-32287474)
chr7 (222-343)||(38134335-38134457)
chr7 (293-345)||(21880158-21880211)
chr7 (277-333)||(1885592-1885648)
chr7 (292-347)||(19992005-19992061)
chr7 (262-342)||(27229280-27229360)
chr7 (283-345)||(19206056-19206119)
chr7 (222-293)||(21880200-21880271)
chr7 (222-280)||(29763129-29763187)
chr7 (293-345)||(3721099-3721152)
chr7 (273-344)||(9933282-9933352)
chr7 (293-345)||(26733310-26733363)
chr7 (293-345)||(28155576-28155629)
chr7 (222-271)||(30813867-30813916)
chr7 (221-285)||(17852056-17852120)
chr7 (288-332)||(22602705-22602749)
chr7 (222-343)||(1433462-1433578)
chr7 (222-293)||(24105726-24105797)
chr7 (288-345)||(7328686-7328744)
chr7 (290-343)||(35297669-35297723)
chr7 (222-299)||(38804489-38804567)
chr7 (244-289)||(8234198-8234243)
chr7 (287-343)||(11890913-11890970)
chr7 (287-343)||(16341504-16341561)
chr7 (293-345)||(19213809-19213862)
chr7 (293-345)||(20549797-20549850)
chr7 (222-255)||(23128603-23128636)
chr7 (294-350)||(33994213-33994270)
chr7 (236-293)||(33994260-33994317)
chr7 (315-344)||(40131991-40132020)
chr7 (294-345)||(1401031-1401083)
chr7 (220-272)||(6490785-6490837)
chr7 (293-344)||(8234153-8234205)
chr7 (294-345)||(24146822-24146874)
[»] chr1 (89 HSPs)
chr1 (220-333)||(47989516-47989629)
chr1 (222-346)||(31694639-31694766)
chr1 (223-343)||(21032215-21032335)
chr1 (224-347)||(1486646-1486764)
chr1 (222-344)||(9828051-9828174)
chr1 (222-347)||(40917755-40917879)
chr1 (236-343)||(6612114-6612222)
chr1 (222-347)||(5944285-5944413)
chr1 (222-333)||(6427483-6427594)
chr1 (218-347)||(18556381-18556511)
chr1 (222-341)||(25361896-25362012)
chr1 (222-344)||(32461393-32461515)
chr1 (282-344)||(6332678-6332740)
chr1 (273-341)||(44482240-44482309)
chr1 (262-345)||(9629869-9629953)
chr1 (276-340)||(15449215-15449279)
chr1 (220-347)||(22515825-22515942)
chr1 (236-347)||(17778553-17778658)
chr1 (220-293)||(46348321-46348394)
chr1 (288-347)||(113303-113363)
chr1 (289-344)||(24577182-24577238)
chr1 (266-345)||(34371720-34371799)
chr1 (222-293)||(37598879-37598950)
chr1 (276-345)||(5376483-5376553)
chr1 (222-332)||(25934636-25934746)
chr1 (263-333)||(30173732-30173802)
chr1 (289-344)||(1704988-1705044)
chr1 (262-345)||(27471535-27471619)
chr1 (273-333)||(28273068-28273128)
chr1 (300-347)||(14359529-14359576)
chr1 (297-347)||(18471302-18471355)
chr1 (293-347)||(38078661-38078716)
chr1 (223-293)||(5927281-5927351)
chr1 (293-342)||(18337338-18337388)
chr1 (298-347)||(31015047-31015097)
chr1 (294-343)||(40258934-40258984)
chr1 (293-344)||(51410031-51410084)
chr1 (224-293)||(42359391-42359460)
chr1 (293-344)||(22881616-22881668)
chr1 (293-344)||(42359449-42359501)
chr1 (237-293)||(51410073-51410129)
chr1 (294-333)||(1815276-1815315)
chr1 (223-345)||(6414932-6415054)
chr1 (284-346)||(8010278-8010341)
chr1 (293-347)||(19058856-19058911)
chr1 (293-347)||(31672895-31672950)
chr1 (293-347)||(46348383-46348438)
chr1 (222-343)||(16164244-16164366)
chr1 (287-333)||(35919270-35919316)
chr1 (236-345)||(17831476-17831584)
chr1 (295-347)||(21378582-21378635)
chr1 (293-345)||(41877470-41877523)
chr1 (289-344)||(7918207-7918263)
chr1 (224-288)||(16297223-16297287)
chr1 (274-345)||(21038089-21038161)
chr1 (294-345)||(36878467-36878519)
chr1 (222-293)||(1815305-1815376)
chr1 (222-343)||(15323171-15323287)
chr1 (294-344)||(18190109-18190160)
chr1 (222-293)||(18337377-18337448)
chr1 (288-350)||(26526751-26526816)
chr1 (227-290)||(40181922-40181984)
chr1 (280-327)||(48547972-48548019)
chr1 (245-324)||(52284731-52284809)
chr1 (289-327)||(2218264-2218302)
chr1 (283-344)||(10572579-10572641)
chr1 (221-303)||(17408740-17408822)
chr1 (222-268)||(21365992-21366038)
chr1 (290-332)||(25272502-25272544)
chr1 (295-344)||(32434718-32434768)
chr1 (298-347)||(48450592-48450642)
chr1 (295-343)||(1864882-1864931)
chr1 (222-291)||(5898206-5898275)
chr1 (289-345)||(6427356-6427413)
chr1 (301-347)||(13011223-13011271)
chr1 (277-345)||(17754317-17754386)
chr1 (289-345)||(20157346-20157403)
chr1 (293-347)||(24334705-24334761)
chr1 (292-333)||(28663627-28663668)
chr1 (222-271)||(29144320-29144369)
chr1 (222-287)||(31015091-31015156)
chr1 (293-345)||(40181877-40181930)
chr1 (222-271)||(46940748-46940797)
chr1 (308-347)||(1262888-1262928)
chr1 (221-293)||(18190047-18190119)
chr1 (293-333)||(21620974-21621014)
chr1 (220-256)||(35702540-35702576)
chr1 (274-345)||(36906003-36906075)
chr1 (286-345)||(38503326-38503386)
[»] chr6 (76 HSPs)
chr6 (222-347)||(16766701-16766827)
chr6 (222-347)||(9107299-9107425)
chr6 (222-344)||(8365448-8365571)
chr6 (222-343)||(5970037-5970159)
chr6 (222-343)||(8713987-8714110)
chr6 (244-333)||(9522910-9522999)
chr6 (223-344)||(31384927-31385048)
chr6 (221-346)||(28152104-28152218)
chr6 (220-342)||(9629392-9629515)
chr6 (222-340)||(10339054-10339174)
chr6 (222-347)||(3209385-3209518)
chr6 (221-331)||(7248379-7248489)
chr6 (224-347)||(12696328-12696446)
chr6 (236-347)||(3398623-3398728)
chr6 (289-344)||(10770670-10770726)
chr6 (277-345)||(21395292-21395360)
chr6 (220-347)||(24645484-24645602)
chr6 (244-344)||(17302563-17302665)
chr6 (223-347)||(17841530-17841644)
chr6 (222-332)||(18367856-18367966)
chr6 (220-345)||(34073276-34073400)
chr6 (293-347)||(4877946-4878002)
chr6 (289-347)||(9911524-9911584)
chr6 (267-332)||(16488564-16488629)
chr6 (222-344)||(34595141-34595253)
chr6 (222-345)||(10294113-10294237)
chr6 (293-359)||(28715289-28715354)
chr6 (293-347)||(7977830-7977885)
chr6 (222-344)||(8776908-8777025)
chr6 (266-344)||(9195727-9195806)
chr6 (222-293)||(33001229-33001300)
chr6 (276-345)||(26562695-26562765)
chr6 (283-347)||(8931592-8931657)
chr6 (289-345)||(9025490-9025547)
chr6 (262-346)||(17435204-17435289)
chr6 (293-344)||(7801156-7801208)
chr6 (276-343)||(9617442-9617510)
chr6 (222-293)||(6898221-6898292)
chr6 (266-333)||(11424684-11424751)
chr6 (284-345)||(7723241-7723303)
chr6 (295-344)||(16833315-16833365)
chr6 (298-347)||(31959163-31959213)
chr6 (244-293)||(853821-853870)
chr6 (299-347)||(1191706-1191755)
chr6 (293-345)||(7265593-7265646)
chr6 (222-287)||(17327590-17327655)
chr6 (220-293)||(32511604-32511677)
chr6 (293-347)||(32978899-32978955)
chr6 (282-326)||(785444-785488)
chr6 (293-344)||(853859-853911)
chr6 (293-344)||(6898281-6898333)
chr6 (225-293)||(32978842-32978910)
chr6 (293-343)||(403864-403915)
chr6 (293-343)||(426514-426565)
chr6 (277-343)||(4118317-4118384)
chr6 (289-343)||(7930313-7930368)
chr6 (222-293)||(28715343-28715414)
chr6 (299-344)||(1681765-1681811)
chr6 (236-345)||(5000569-5000679)
chr6 (294-347)||(7938120-7938174)
chr6 (222-272)||(7938169-7938219)
chr6 (289-345)||(7086801-7086858)
chr6 (222-259)||(7723199-7723236)
chr6 (289-345)||(9027184-9027241)
chr6 (293-345)||(19040358-19040411)
chr6 (293-345)||(32511666-32511719)
chr6 (293-333)||(1700371-1700411)
chr6 (287-350)||(2224227-2224291)
chr6 (293-333)||(7027261-7027301)
chr6 (245-293)||(10827507-10827555)
chr6 (300-343)||(17341671-17341715)
chr6 (288-332)||(19369837-19369881)
chr6 (283-350)||(20576623-20576691)
chr6 (273-313)||(22745996-22746036)
chr6 (293-333)||(26402680-26402720)
chr6 (294-347)||(31429004-31429059)
[»] scaffold0136 (1 HSPs)
scaffold0136 (222-333)||(3778-3889)
[»] chr3 (67 HSPs)
chr3 (236-347)||(4987234-4987346)
chr3 (219-345)||(34185049-34185176)
chr3 (222-344)||(41961579-41961702)
chr3 (222-333)||(14209132-14209243)
chr3 (222-344)||(28812522-28812645)
chr3 (226-347)||(14829694-14829816)
chr3 (246-347)||(14832103-14832205)
chr3 (222-343)||(15796223-15796345)
chr3 (221-345)||(8039763-8039888)
chr3 (222-345)||(49651716-49651839)
chr3 (222-347)||(27505250-27505370)
chr3 (222-293)||(55401123-55401194)
chr3 (223-344)||(14216899-14217021)
chr3 (223-344)||(14223028-14223150)
chr3 (265-344)||(750590-750670)
chr3 (277-359)||(1509533-1509614)
chr3 (273-344)||(34910324-34910396)
chr3 (222-293)||(11252024-11252095)
chr3 (219-344)||(17005545-17005671)
chr3 (291-347)||(21256984-21257041)
chr3 (244-333)||(55212982-55213070)
chr3 (226-345)||(11665950-11666070)
chr3 (291-346)||(28918006-28918062)
chr3 (299-347)||(35994744-35994792)
chr3 (293-347)||(8593140-8593196)
chr3 (296-347)||(26508114-26508166)
chr3 (293-359)||(51206353-51206418)
chr3 (222-333)||(16789031-16789141)
chr3 (287-345)||(25948881-25948940)
chr3 (222-293)||(40993275-40993346)
chr3 (293-343)||(25775516-25775568)
chr3 (293-344)||(10954959-10955011)
chr3 (237-293)||(10955000-10955056)
chr3 (289-333)||(39756255-39756299)
chr3 (294-333)||(3865693-3865732)
chr3 (222-293)||(7171549-7171620)
chr3 (273-343)||(16192730-16192801)
chr3 (222-293)||(20503513-20503584)
chr3 (273-347)||(21479122-21479192)
chr3 (276-345)||(4990950-4991020)
chr3 (277-350)||(28678304-28678378)
chr3 (293-345)||(7928456-7928509)
chr3 (293-345)||(8383263-8383316)
chr3 (223-293)||(8789489-8789561)
chr3 (289-347)||(14747565-14747625)
chr3 (288-347)||(3164020-3164080)
chr3 (293-333)||(8587021-8587061)
chr3 (285-333)||(17276744-17276792)
chr3 (295-342)||(20503474-20503522)
chr3 (286-344)||(9800047-9800106)
chr3 (222-293)||(13845465-13845536)
chr3 (273-342)||(15812803-15812871)
chr3 (236-345)||(25064915-25065023)
chr3 (222-292)||(8842378-8842448)
chr3 (294-343)||(10268487-10268537)
chr3 (224-318)||(13806270-13806363)
chr3 (223-333)||(15999951-16000056)
chr3 (293-346)||(26492205-26492259)
chr3 (273-345)||(1550146-1550219)
chr3 (222-271)||(11610579-11610628)
chr3 (222-298)||(14223788-14223864)
chr3 (220-293)||(35222986-35223059)
chr3 (293-345)||(45451559-45451612)
chr3 (242-344)||(2620004-2620105)
chr3 (293-363)||(7614415-7614484)
chr3 (293-344)||(10335286-10335338)
chr3 (222-333)||(14342481-14342592)
[»] scaffold0003 (1 HSPs)
scaffold0003 (222-347)||(241598-241724)
[»] chr2 (66 HSPs)
chr2 (222-342)||(37419752-37419873)
chr2 (222-324)||(35056896-35056998)
chr2 (222-346)||(30717459-30717584)
chr2 (223-345)||(44860326-44860449)
chr2 (224-344)||(36756275-36756396)
chr2 (222-344)||(26769518-26769641)
chr2 (222-347)||(11223793-11223918)
chr2 (236-344)||(15657871-15657980)
chr2 (222-345)||(18420363-18420487)
chr2 (222-332)||(34784911-34785021)
chr2 (222-344)||(12668352-12668475)
chr2 (222-306)||(27084304-27084388)
chr2 (236-331)||(28524447-28524542)
chr2 (224-347)||(2438661-2438774)
chr2 (284-343)||(23058433-23058494)
chr2 (236-344)||(4207864-4207972)
chr2 (290-344)||(974754-974809)
chr2 (275-345)||(4882678-4882749)
chr2 (236-347)||(14996173-14996279)
chr2 (225-332)||(17776607-17776714)
chr2 (218-293)||(18840949-18841024)
chr2 (293-347)||(37558981-37559036)
chr2 (293-344)||(19536397-19536450)
chr2 (262-332)||(32749794-32749864)
chr2 (264-341)||(34337152-34337225)
chr2 (291-347)||(20539672-20539729)
chr2 (288-333)||(33153443-33153488)
chr2 (221-293)||(38117098-38117170)
chr2 (220-331)||(41843462-41843567)
chr2 (293-347)||(5040736-5040793)
chr2 (293-343)||(18421971-18422022)
chr2 (223-293)||(28596517-28596587)
chr2 (293-343)||(30404850-30404901)
chr2 (221-332)||(36096303-36096414)
chr2 (220-341)||(11307932-11308053)
chr2 (222-290)||(19580225-19580293)
chr2 (236-292)||(19942314-19942370)
chr2 (300-347)||(21374706-21374754)
chr2 (262-345)||(27286261-27286345)
chr2 (293-333)||(38442326-38442366)
chr2 (222-343)||(2331802-2331922)
chr2 (293-343)||(15972881-15972932)
chr2 (222-293)||(15972921-15972992)
chr2 (294-344)||(18841014-18841065)
chr2 (222-293)||(24009343-24009414)
chr2 (227-293)||(12224271-12224337)
chr2 (277-350)||(18889575-18889649)
chr2 (222-331)||(29367283-29367382)
chr2 (243-343)||(36281693-36281795)
chr2 (300-345)||(39323270-39323316)
chr2 (222-304)||(42511322-42511403)
chr2 (236-293)||(5040782-5040839)
chr2 (293-347)||(21624270-21624326)
chr2 (287-347)||(24894393-24894454)
chr2 (293-345)||(34691805-34691858)
chr2 (293-345)||(34714217-34714270)
chr2 (273-330)||(44635520-44635572)
chr2 (293-344)||(5367199-5367251)
chr2 (246-298)||(5891738-5891790)
chr2 (289-344)||(18622613-18622669)
chr2 (222-293)||(20242667-20242738)
chr2 (293-344)||(20473329-20473381)
chr2 (262-345)||(24975295-24975378)
chr2 (293-344)||(30335424-30335476)
chr2 (276-332)||(35447870-35447926)
chr2 (294-345)||(42832277-42832329)
[»] scaffold0450 (1 HSPs)
scaffold0450 (222-344)||(8564-8687)
[»] scaffold0019 (1 HSPs)
scaffold0019 (222-347)||(71727-71855)
[»] chr4 (76 HSPs)
chr4 (223-345)||(30982808-30982931)
chr4 (222-344)||(19482675-19482798)
chr4 (221-347)||(23292925-23293041)
chr4 (222-347)||(51701262-51701385)
chr4 (222-344)||(24613630-24613753)
chr4 (221-344)||(15724482-15724602)
chr4 (223-345)||(847957-848080)
chr4 (273-344)||(4383375-4383446)
chr4 (227-345)||(30838216-30838335)
chr4 (223-347)||(3947702-3947821)
chr4 (239-344)||(40481644-40481743)
chr4 (236-333)||(19312354-19312451)
chr4 (293-344)||(12797338-12797389)
chr4 (262-333)||(22234859-22234930)
chr4 (222-346)||(47263991-47264116)
chr4 (293-363)||(4157140-4157208)
chr4 (222-293)||(12895214-12895285)
chr4 (289-346)||(11596348-11596406)
chr4 (293-343)||(16073403-16073453)
chr4 (287-347)||(12895110-12895171)
chr4 (226-347)||(21945507-21945618)
chr4 (221-332)||(5414100-5414211)
chr4 (295-345)||(29205450-29205501)
chr4 (291-347)||(30298950-30299008)
chr4 (291-347)||(30327818-30327876)
chr4 (222-293)||(34306744-34306815)
chr4 (253-320)||(53490724-53490791)
chr4 (262-343)||(903930-904012)
chr4 (239-333)||(27706123-27706217)
chr4 (293-346)||(28964248-28964302)
chr4 (262-332)||(44132613-44132683)
chr4 (224-293)||(4157197-4157266)
chr4 (224-293)||(4157484-4157553)
chr4 (285-347)||(28084525-28084589)
chr4 (293-347)||(49431029-49431085)
chr4 (222-347)||(715545-715663)
chr4 (222-347)||(752871-752989)
chr4 (293-333)||(42640548-42640588)
chr4 (293-344)||(54580023-54580075)
chr4 (221-292)||(8423657-8423728)
chr4 (224-330)||(28000672-28000779)
chr4 (293-344)||(34306804-34306855)
chr4 (276-347)||(50280885-50280958)
chr4 (224-298)||(34589645-34589719)
chr4 (248-345)||(38148680-38148778)
chr4 (295-343)||(6485613-6485662)
chr4 (293-334)||(6879465-6879506)
chr4 (293-345)||(8423718-8423771)
chr4 (276-344)||(21658797-21658866)
chr4 (220-293)||(35157923-35157996)
chr4 (294-350)||(35157986-35158043)
chr4 (236-293)||(49431074-49431131)
chr4 (222-343)||(24343515-24343632)
chr4 (267-331)||(46083965-46084029)
chr4 (222-293)||(2361915-2361986)
chr4 (293-347)||(2361975-2362030)
chr4 (278-333)||(12708166-12708221)
chr4 (222-345)||(15029771-15029890)
chr4 (222-333)||(19500787-19500898)
chr4 (222-285)||(35161092-35161155)
chr4 (273-332)||(37496724-37496783)
chr4 (293-347)||(38847012-38847067)
chr4 (222-296)||(53381530-53381605)
chr4 (293-334)||(4157454-4157495)
chr4 (294-342)||(9996849-9996898)
chr4 (276-343)||(14126093-14126162)
chr4 (223-256)||(17425348-17425381)
chr4 (277-345)||(32915589-32915658)
chr4 (288-343)||(5775353-5775409)
chr4 (222-270)||(11596297-11596345)
chr4 (222-270)||(12708213-12708261)
chr4 (222-298)||(16184874-16184950)
chr4 (236-342)||(21873316-21873421)
chr4 (236-342)||(21929177-21929282)
chr4 (303-347)||(28720880-28720924)
chr4 (276-343)||(40742599-40742667)
[»] scaffold0086 (1 HSPs)
scaffold0086 (222-333)||(2947-3058)
[»] scaffold0008 (1 HSPs)
scaffold0008 (236-345)||(263315-263425)
[»] scaffold0044 (1 HSPs)
scaffold0044 (262-342)||(53189-53270)
[»] scaffold0036 (1 HSPs)
scaffold0036 (224-344)||(9678-9799)
[»] scaffold0512 (1 HSPs)
scaffold0512 (222-293)||(4976-5047)
[»] scaffold0246 (1 HSPs)
scaffold0246 (239-344)||(19583-19682)
[»] scaffold0223 (1 HSPs)
scaffold0223 (285-347)||(20176-20239)
[»] scaffold0171 (2 HSPs)
scaffold0171 (222-333)||(23530-23641)
scaffold0171 (287-333)||(23439-23485)
[»] scaffold0123 (1 HSPs)
scaffold0123 (262-345)||(44494-44578)
[»] scaffold0053 (1 HSPs)
scaffold0053 (222-293)||(8846-8917)
[»] scaffold0154 (1 HSPs)
scaffold0154 (222-312)||(13453-13543)
[»] scaffold0004 (3 HSPs)
scaffold0004 (223-345)||(92813-92940)
scaffold0004 (294-330)||(123650-123686)
scaffold0004 (292-333)||(83179-83220)
[»] scaffold0623 (1 HSPs)
scaffold0623 (223-332)||(5926-6035)
[»] scaffold0025 (1 HSPs)
scaffold0025 (290-343)||(23777-23832)
[»] scaffold0652 (2 HSPs)
scaffold0652 (223-293)||(403-473)
scaffold0652 (293-345)||(462-515)
[»] scaffold0057 (1 HSPs)
scaffold0057 (222-347)||(24029-24155)
[»] scaffold0793 (1 HSPs)
scaffold0793 (222-347)||(4821-4939)
[»] scaffold0168 (1 HSPs)
scaffold0168 (276-343)||(21051-21119)
[»] scaffold0122 (1 HSPs)
scaffold0122 (289-344)||(8673-8729)
[»] scaffold0722 (1 HSPs)
scaffold0722 (293-347)||(7032-7087)
[»] scaffold0103 (1 HSPs)
scaffold0103 (301-347)||(51815-51862)
[»] scaffold0027 (2 HSPs)
scaffold0027 (293-343)||(46690-46741)
scaffold0027 (220-256)||(46742-46778)
[»] scaffold0011 (1 HSPs)
scaffold0011 (294-344)||(17750-17801)
[»] scaffold0361 (2 HSPs)
scaffold0361 (222-288)||(14580-14646)
scaffold0361 (302-344)||(14537-14580)
[»] scaffold0306 (1 HSPs)
scaffold0306 (224-344)||(13407-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (224-344)||(21804-21920)
[»] scaffold0126 (1 HSPs)
scaffold0126 (278-343)||(19153-19218)
[»] scaffold0021 (1 HSPs)
scaffold0021 (296-333)||(130501-130538)
[»] scaffold0020 (1 HSPs)
scaffold0020 (289-345)||(135308-135365)
[»] scaffold0009 (2 HSPs)
scaffold0009 (239-292)||(174510-174563)
scaffold0009 (239-292)||(180023-180076)
[»] scaffold0049 (2 HSPs)
scaffold0049 (294-345)||(63779-63831)
scaffold0049 (223-341)||(56932-57052)
[»] scaffold0376 (1 HSPs)
scaffold0376 (263-345)||(6318-6401)
[»] scaffold0050 (2 HSPs)
scaffold0050 (293-343)||(70286-70337)
scaffold0050 (236-293)||(70326-70383)
[»] scaffold0022 (1 HSPs)
scaffold0022 (221-292)||(90892-90963)
[»] scaffold0236 (1 HSPs)
scaffold0236 (290-332)||(25765-25807)
[»] scaffold0018 (1 HSPs)
scaffold0018 (288-344)||(178813-178871)
[»] scaffold1528 (1 HSPs)
scaffold1528 (277-345)||(1041-1110)
[»] scaffold0083 (1 HSPs)
scaffold0083 (293-326)||(45530-45563)


Alignment Details
Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 221 - 347
Target Start/End: Complemental strand, 39698672 - 39698545
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaa 320  Q
    |||||||||||| | ||||||||||||||||||||| ||| ||||||| || |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  39698672 actatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaa 39698573  T
Q  321 ttatgtgat-ttttcaaattattagctg 347  Q
    ||||||||| ||||||||||||||||||    
T  39698572 ttatgtgattttttcaaattattagctg 39698545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 7677835 - 7677709
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | | |||||||||||||||||||  || |||||||||  || |||||| |||||||||||||||||||||||| |||||  |||||||    
T  7677835 ctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaat 7677736  T
Q  322 tatgtgat-ttttcaaattattagctg 347  Q
    |||||||| ||||||||||||||||||    
T  7677735 tatgtgattttttcaaattattagctg 7677709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 21522880 - 21522754
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    |||||| |||| | ||||| | |||||||||||||  || || ||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaat 21522781  T
Q  322 tatgtga-tttttcaaattattagctg 347  Q
    ||||| | ||||| |||||||||||||    
T  21522780 tatgttattttttaaaattattagctg 21522754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 21533446 - 21533320
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    |||||| |||| | ||||| | |||||||||||||  || || ||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaat 21533347  T
Q  322 tatgtga-tttttcaaattattagctg 347  Q
    ||||| | ||||| |||||||||||||    
T  21533346 tatgttattttttaaaattattagctg 21533320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 21542143 - 21542037
Alignment:
Q  239 tcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgat-ttttcaaa 337  Q
    |||| ||||| |||||||  || |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||| |||    
T  21542143 tccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaa 21542044  T
Q  338 ttattag 344  Q
    |||||||    
T  21542043 ttattag 21542037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 19579817 - 19579705
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tc 334  Q
    |||||||||||||||||||||  || |||  ||||  ||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||||||| ||    
T  19579817 cactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttctc 19579718  T
Q  335 aaattattagctg 347  Q
    |||||||||||||    
T  19579717 aaattattagctg 19579705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 223 - 345
Target Start/End: Complemental strand, 3966632 - 3966509
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    |||||||||| | ||||||||||||||| |||||  |  ||| |||||| ||| ||||||||||| |||||||||||||||| | |||||| ||||||||    
T  3966632 tatgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaatt 3966533  T
Q  323 atgtgatttt-tcaaattattagc 345  Q
     ||||||||| |||||||||||||    
T  3966532 gtgtgattttctcaaattattagc 3966509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 226 - 344
Target Start/End: Complemental strand, 30183675 - 30183556
Alignment:
Q  226 gaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatg 325  Q
    ||||||||| |||| |||| |||||||||||  |  |||||||||| ||||||||| || ||| |||||||||||||||||||||||| || |||| |||    
T  30183675 gaagcacagacacttctcgaattaggcgtgtcccagtgtcggacacgtgtcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatg 30183576  T
Q  326 tgat-ttttcaaattattag 344  Q
    |||| |||||||||||||||    
T  30183575 tgatattttcaaattattag 30183556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 15382590 - 15382481
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga---tttt 332  Q
    |||||||||||||||||||||  || |||||||||  |||||||||| ||||||||||     |||||||||||||||||||||||||| |||   ||||    
T  15382590 cactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacac-----cgacacttgtaattatactgaattatatgattttttt 15382496  T
Q  333 tcaaattattagctg 347  Q
    |||||||||||||||    
T  15382495 tcaaattattagctg 15382481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 222 - 347
Target Start/End: Original strand, 37328775 - 37328899
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||||||||| |||| |  || | |||||| | |  ||||||||||||||||||||||||||||| |||||||| |||||||    
T  37328775 ctatgaagcacggacactcctcggattaagcgtatcccggtatcggacgcat--cgtgtccgacaccgacacgacaccgacacatgtaattacactgaat 37328872  T
Q  322 tatgtgattttt-caaattattagctg 347  Q
    | |||||||||| ||||||||| ||||    
T  37328873 tttgtgatttttacaaattatttgctg 37328899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 31084447 - 31084327
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||| ||| | ||||||||||||||||| |||  |  |||||||||| |||||||||||||||      |||| ||||||||||||||| | |||||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacac------gacatcgacacttgtaattacattgaat 31084354  T
Q  322 tatgtgat-ttttcaaattattagctg 347  Q
    |||||||| ||||||||||||||||||    
T  31084353 tatgtgattttttcaaattattagctg 31084327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 21351889 - 21351957
Alignment:
Q  277 gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    ||||| |||||||||| |||||||||||||||||||| |||||||||||||| |||||| |||||||||    
T  21351889 gtgtcggacaccgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattattag 21351957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 343
Target Start/End: Complemental strand, 30098458 - 30098334
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactga 319  Q
    ||||||||||||| | || ||||||||||||| ||||   | |||| ||||| ||||||||||||||| ||| ||| |||||||  | |||||| | |||    
T  30098458 aactatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacactgactcgataccgacatctataattacattga 30098359  T
Q  320 attatgtgatttt-tcaaattatta 343  Q
    ||||||||||||| |||||||||||    
T  30098358 attatgtgattttctcaaattatta 30098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 17088396 - 17088291
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgat--tttt 333  Q
    |||||||||||||||||||||  || ||||||||||     ||| |||||||||||||||||  |||||||||||| | ||| |||||||||||  ||||    
T  17088396 cactcctcggattaggcgtgtcccggtgtcggacac-----gtgaccgacaccgacacgacagtgacacttgtaatcacactaaattatgtgattttttt 17088302  T
Q  334 caaattattag 344  Q
    |||||||||||    
T  17088301 caaattattag 17088291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 332
Target Start/End: Complemental strand, 18592200 - 18592093
Alignment:
Q  225 tgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattat 324  Q
    |||||||| | ||||| ||| ||||| |||||  ||||||| ||||| ||| |||||||||||||||||||||||| ||| | |||||| | ||||||||    
T  18592200 tgaagcacggacactcatcgaattagccgtgtcccgatgtcagacacgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattat 18592101  T
Q  325 gtgatttt 332  Q
    || |||||    
T  18592100 gtaatttt 18592093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 21191056 - 21191111
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  21191056 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctg 21191111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 343
Target Start/End: Original strand, 36642696 - 36642813
Alignment:
Q  226 gaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatg 325  Q
    ||||||| | ||||||||  |||||||||||  || |||||||||| |||||||||||||||| ||| ||||||||||||| || ||| ||| || ||||    
T  36642696 gaagcaccgacactcctccaattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaaatatg 36642794  T
Q  326 tga-tttttcaaattatta 343  Q
    | | |||||||||||||||    
T  36642795 tcactttttcaaattatta 36642813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 223 - 332
Target Start/End: Complemental strand, 6401627 - 6401518
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    |||||||||| | ||||||| |||| |||||| |  |  |||| ||||| ||||||||||||||| |||||||||||||||| | |||||| |||| |||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtatt 6401528  T
Q  323 atgtgatttt 332  Q
     |||||||||    
T  6401527 ttgtgatttt 6401518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 267 - 332
Target Start/End: Complemental strand, 21814346 - 21814281
Alignment:
Q  267 gacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt 332  Q
    ||||| |||||||||||||||||||||||||||||||| | |||||| |||| ||| |||||||||    
T  21814346 gacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgatttt 21814281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 6247681 - 6247629
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattag 344  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 6247629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 345
Target Start/End: Complemental strand, 11686068 - 11685945
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||| |||||| ||||  | | | | |||||| |||||||||||||||||| ||||||||||||| | |||||| ||| |||    
T  11686068 ctatgaagcacggacactcctccgattagccgtgccttggttttggacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaat 11685970  T
Q  322 tatgtga-tttttcaaattattagc 345  Q
    |||| || ||| |||||||||||||    
T  11685969 tatgcgactttctcaaattattagc 11685945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 333
Target Start/End: Complemental strand, 12199997 - 12199949
Alignment:
Q  285 caccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  12199997 caccaacacgacaccgacacttgtaattgtactgaattatgtgattttt 12199949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 13287383 - 13287450
Alignment:
Q  276 cgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattatta 343  Q
    |||||||||||  ||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  13287383 cgtgtccgacag-gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 13287450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 347
Target Start/End: Original strand, 21576685 - 21576800
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||||||||||||||||  |  |||| ||||| |||||||||||||| ||||           ||||||||||| |||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgac-----------acttgtaattacactgaat 21576773  T
Q  322 tatgtga-tttttcaaattattagctg 347  Q
    ||||||| |||||||||||||||||||    
T  21576774 tatgtgattttttcaaattattagctg 21576800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 41633803 - 41633739
Alignment:
Q  284 acaccgacacgacaccgacacttgtaattatactgaattatgt-gatttttcaaattattagctg 347  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||  ||||||||||||||||||||    
T  41633803 acaccgatacgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctg 41633739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 347
Target Start/End: Original strand, 22299460 - 22299535
Alignment:
Q  273 tgtcgtgtccgacaccgacac-gacaccgacacttgtaattatactgaattatgtgatttttcaaattattagctg 347  Q
    |||||| |||||||| ||||| || || ||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  22299460 tgtcgtatccgacacggacactgatactgacccttgtaattatactgaatcatgtgattttttaaattattagctg 22299535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 40131751 - 40131628
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||| ||| | ||||||| ||| ||| |||||  | ||||| |||||  |||||||| |||| ||| |||||||||| | || |||||| |||||||    
T  40131751 ctatgaaacacggacactccttggagtagacgtgtcccaatgtcagacacaagtcgtgtctgacatcgatacgacaccgatatttataattaaactgaat 40131652  T
Q  322 tatgtgat-ttttcaaattattag 344  Q
    |||||||| |||||||||||||||    
T  40131651 tatgtgattttttcaaattattag 40131628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 43565000 - 43564929
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||| | |||| ||||||||||||||||  ||  ||||||||| |||||||||||||||||||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacac 43564929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 22423802 - 22423864
Alignment:
Q  283 gacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattag 344  Q
    |||||||||||||||||||||  | |||||||| |||||||||||||||| ||||||||||||    
T  22423802 gacaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattattag 22423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 42893418 - 42893364
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattagctg 347  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattattagctg 42893364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 333
Target Start/End: Complemental strand, 15884047 - 15884007
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  15884047 cgacaccgacacttgtaattacactgaattatgtgattttt 15884007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 345
Target Start/End: Original strand, 32766872 - 32766996
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||| |||||| ||| |   | |||||||||| |||||| | |||||||||||||||||  |||| | |||||| | |||||    
T  32766872 ctatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacacgacacaaacacatataattacattgaat 32766971  T
Q  322 tatgtgatttt-tcaaattattagc 345  Q
    | || |||||| |||||||||||||    
T  32766972 tgtgcgattttctcaaattattagc 32766996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 39268541 - 39268609
Alignment:
Q  225 tgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||| | |||||||||||||||||||||  |  |||||||||| |||||||||| ||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacac 39268609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 345
Target Start/End: Original strand, 41091186 - 41091310
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    |||||||||||   |||||||| |||||| ||||  | | |||  ||||| ||||| ||||||||  ||||||||| |||||| | |||||| |||||||    
T  41091186 ctatgaagcacgaacactcctcagattagacgtgccttggtgttagacacatgtcgcgtccgacattgacacgacatcgacacatataattacactgaat 41091285  T
Q  322 tatgtgatttt-tcaaattattagc 345  Q
    ||||||||||| |||||| ||||||    
T  41091286 tatgtgattttctcaaatcattagc 41091310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 359
Target Start/End: Original strand, 6471886 - 6471954
Alignment:
Q  290 acacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagctgcgtgtcagtgtc 359  Q
    |||||||||| |||| | |||||| |||||||||||||||||| |||||||||||||  ||||||||||||    
T  6471886 acacgacacccacacatataattacactgaattatgtgattttctcaaattattagc--cgtgtcagtgtc 6471954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 12641764 - 12641693
Alignment:
Q  262 tgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    ||||| |||| ||| ||||| |||||| ||||||||| ||||| || ||||||||| |||||||||||||||    
T  12641764 tgtcgaacacgtgttgtgtctgacaccaacacgacactgacacgtgcaattatactaaattatgtgattttt 12641693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 32630675 - 32630746
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||| || ||||||||| |||||| |||| || ||||||||||| |||||| |||||||| |||||    
T  32630675 ctatgaagcatagacactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgacactgacac 32630746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 345
Target Start/End: Complemental strand, 43001922 - 43001806
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatta 323  Q
    ||||||||| | |||||||||||||||||||||   | |||  ||||| |||||||||||||||        |||| ||||||||||||| |||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacacat------caccaacacttgtaattacactgaatta 43001829  T
Q  324 tgtga-tttttcaaattattagc 345  Q
    ||| | |||||||||||||||||    
T  43001828 tgtaattttttcaaattattagc 43001806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 7218271 - 7218321
Alignment:
Q  297 accgacacttgtaattatactgaattatgtgattt-ttcaaattattagct 346  Q
    ||||||||||||||||| ||||||||||||||||| || ||||||||||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattattagct 7218321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 8420086 - 8420032
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagct 346  Q
    ||||||||||||||||||||| | |||||||||| | ||||||||||||||||||    
T  8420086 cgacaccgacacttgtaattacattgaattatgttattttttcaaattattagct 8420032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 10298634 - 10298576
Alignment:
Q  287 ccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    |||| |||||||||||||||||||||| | || ||||||||| ||||||||||||||||    
T  10298634 ccgatacgacaccgacacttgtaattacattgtattatgtgactttttcaaattattag 10298576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 14674323 - 14674273
Alignment:
Q  298 ccgacacttgtaattatactgaattatgtgat-ttttcaaattattagctg 347  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctg 14674273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 6035558 - 6035489
Alignment:
Q  276 cgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttttcaaattattagc 345  Q
    |||||| | |||||||||||||||||||  | |||||| |||||||||| | |||| |||||||||||||    
T  6035558 cgtgtctgtcaccgacacgacaccgacaaatataattacactgaattatattatttctcaaattattagc 6035489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 15086597 - 15086552
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcgg 267  Q
    |||||||||| || |||||||||||||||||||||| |||||||||    
T  15086597 ctatgaagcaaagacactcctcggattaggcgtgttccgatgtcgg 15086552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 332
Target Start/End: Original strand, 23015938 - 23016028
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt 332  Q
    |||||||||||||||||||||  | ||||||||||| ||||||||      |||| || ||| |||||| | |||||| ||||||||||||||||||    
T  23015938 cactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgt------ccgatacaacatcgacacctataattacactgaattatgtgatttt 23016028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 293
Target Start/End: Original strand, 16304365 - 16304437
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||||| | || |||||||||||| ||||| ||| |||||| ||| |||||||||||| || |||||    
T  16304365 actatgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtccgatactgacac 16304437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 292
Target Start/End: Complemental strand, 17123168 - 17123097
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgaca 292  Q
    ||||||||||||| | |||||||||||||||||||||  || |||||||||  | |||||||| |||||||||    
T  17123168 aactatgaagcacggacactcctcggattaggcgtgtcccg-tgtcggacatgtttcgtgtccaacaccgaca 17123097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 344
Target Start/End: Complemental strand, 30135390 - 30135320
Alignment:
Q  278 tgtccgacacc--gacacgacaccgacacttgtaattatactgaattatgtgat--ttttcaaattattag 344  Q
    |||||||||||  |||| |||||||||||||||||||| | ||| |||||||||  |||||||||||||||    
T  30135390 tgtccgacaccaggacatgacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattag 30135320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 333
Target Start/End: Complemental strand, 33178084 - 33178044
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgattttt 33178044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 343
Target Start/End: Original strand, 24906305 - 24906352
Alignment:
Q  297 accgacacttgtaattatactgaattatgtga-tttttcaaattatta 343  Q
    ||||||||||||||||| |||||||||||| | |||||||||||||||    
T  24906305 accgacacttgtaattacactgaattatgtcattttttcaaattatta 24906352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 343
Target Start/End: Original strand, 28588674 - 28588725
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattatta 343  Q
    |||||||||||| | |||||| |||||||||||||||||| |||||||||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 41995546 - 41995490
Alignment:
Q  275 tcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||||||| ||| ||||||||||  |||||| | |||||||||||||||||    
T  41995546 tcgtgtccgacaccgatacggcaccgacact--taattacattgaattatgtgattttt 41995490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 5894827 - 5894885
Alignment:
Q  287 ccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    ||||||||||||||||||||||| ||| | | |||||| ||| ||||||||||||||||    
T  5894827 ccgacacgacaccgacacttgtagttagattaaattatatgattttttcaaattattag 5894885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 14422961 - 14422908
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttttcaaattattagctg 347  Q
    ||||| ||| |||| |||||| ||||||||||||||||||| |||||||||||||    
T  14422961 cgacatcgaaacttataattacactgaattatgtgattttt-aaattattagctg 14422908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 333
Target Start/End: Original strand, 21319927 - 21319985
Alignment:
Q  275 tcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||||||||| |||| |||||||||| |||| | |||||||| | ||||||    
T  21319927 tcgtgtccgacaccgacatgacatcgacacttgtgattacattgaattatatcattttt 21319985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 27932354 - 27932288
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacacc 288  Q
    ||||||||||||  ||||||||| |||||||||||   | |||| ||||| ||||||||||||||||    
T  27932354 ctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacacc 27932288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 35017163 - 35017113
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacac 271  Q
    |||||||||||| | |||||||||||||||||||||  |||||| ||||||    
T  35017163 actatgaagcacggacactcctcggattaggcgtgtcccgatgttggacac 35017113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 341
Target Start/End: Complemental strand, 14873641 - 14873527
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||||||||||||||||  || ||| |||||| ||| | ||      |||||| ||||||||||| | |||||| ||| |||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgt------ccgacatgacaccgacacatataattacactaaat 14873548  T
Q  322 tatgtgatttt-tcaaattat 341  Q
    |||||| |||| |||||||||    
T  14873547 tatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 17177025 - 17177078
Alignment:
Q  295 acaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    ||||||||||||||||||| | |||||| | ||| |||||||||||||||||||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattattagctg 17177078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 30502388 - 30502441
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||| | |||||| ||||||||| |||||||| |||||||||||||    
T  30502388 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagc 30502441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 30542731 - 30542784
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||| | |||||| ||||||||| |||||||| |||||||||||||    
T  30542731 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagc 30542784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 344
Target Start/End: Complemental strand, 4105310 - 4105264
Alignment:
Q  301 acacttgtaattatactgaattatgtga---tttttcaaattattag 344  Q
    ||||||||||||| ||||||||||||||   ||||||||||||||||    
T  4105310 acacttgtaattacactgaattatgtgatcttttttcaaattattag 4105264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 16374338 - 16374382
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||||||| |||||||| ||||| |||||| ||||||    
T  16374338 gacacgacaccgacacatgtaattacactgatttatgttattttt 16374382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 345
Target Start/End: Complemental strand, 36838605 - 36838549
Alignment:
Q  290 acacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||||||||||| | |||||| ||| |||||||| ||||| |||||||||||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattattagc 36838549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 38464313 - 38464361
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggaca 270  Q
    ||||||||||||| |||||||||||||||| ||||  || |||||||||    
T  38464313 ctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 299
Target Start/End: Complemental strand, 43554631 - 43554568
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcg-tgtccgacaccgacacgacacc 299  Q
    |||| ||||||||||||||||  || ||||||||||  |||| ||||||||||||||||||||||    
T  43554631 cacttctcggattaggcgtgtcccg-tgtcggacacgcgtcggtgtccgacaccgacacgacacc 43554568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 22652106 - 22651980
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||||||||||| |||||  || |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaat 22652007  T
Q  322 tatgtgat-ttttcaaattattagctg 347  Q
    |||||||| ||||||||||||||||||    
T  22652006 tatgtgattttttcaaattattagctg 22651980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 222 - 347
Target Start/End: Original strand, 29510233 - 29510359
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||||||||||| ||||  || ||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  29510233 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaat 29510332  T
Q  322 tatgtga-tttttcaaattattagctg 347  Q
    | ||||| |||||||||||||||||||    
T  29510333 tttgtgattttttcaaattattagctg 29510359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 15816058 - 15816181
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||| ||||||||||||||||  || |||||||  | |||||||||||||||| ||||||||||||||||| |||||| ||| |||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaat 15816157  T
Q  322 tatgtga-tttttcaaattattag 344  Q
    ||||||| ||||||||||||||||    
T  15816158 tatgtgattttttcaaattattag 15816181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 222 - 343
Target Start/End: Original strand, 11927015 - 11927137
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||| ||||||||||||||| ||||||| ||| || ||||||||  |||||| ||||||||||||||| | |||||| |||||||    
T  11927015 ctatgaagcacggacactcatcggattaggcgtgtctcgatgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactgaat 11927114  T
Q  322 tatgtgatttt-tcaaattatta 343  Q
    ||||||||||| |||||||||||    
T  11927115 tatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 29447040 - 29447162
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    |||||||||| | ||||||| |||||||||||||   | |||| ||||| |||||||||||||||||||| |||||||||||||||| ||| | ||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaatt 29447139  T
Q  323 atgtgatttt-tcaaattattag 344  Q
    |||||||||| ||||||||||||    
T  29447140 atgtgattttctcaaattattag 29447162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 222 - 346
Target Start/End: Complemental strand, 8343446 - 8343321
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||||| ||||| |||||||||||||||  || |||||||||| ||||||||| |||||    ||||||| |||||||||||||| ||| |||    
T  8343446 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaat 8343347  T
Q  322 tatgtga-tttttcaaattattagct 346  Q
    ||||||| ||||||||||||||||||    
T  8343346 tatgtgattttttcaaattattagct 8343321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 2572027 - 2572108
Alignment:
Q  264 tcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  2572027 tcggacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 2572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 222 - 347
Target Start/End: Original strand, 22197671 - 22197797
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac-gacaccgacacttgtaattatactgaa 320  Q
    |||| |||||| | |||||||| ||||||||||| | || |||||||||| |||| ||||||||| |||||| ||||| |||||||||||||| ||| ||    
T  22197671 ctataaagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgaca-cgacactgacactgacacttgtaattacactaaa 22197769  T
Q  321 ttatgtg-atttttcaaattattagctg 347  Q
    ||||||| ||||||||||||||||||||    
T  22197770 ttatgtgaatttttcaaattattagctg 22197797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 25566910 - 25566831
Alignment:
Q  283 gacaccgacacgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattagctgcgtgtcagtgtctgtg 363  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  |||||||||||||||    
T  25566910 gacaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagct--gtgtcagtgtctgtg 25566831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 345
Target Start/End: Complemental strand, 28745628 - 28745504
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||| | ||||| | ||| ||| || ||||||  ||||||||||||||||||||||||| ||||| ||||| ||| | |||||    
T  28745628 ctatgaagcacggacactccttgaattagacttgtctcggtgacggacaggtgtcgtgtccgacaccgacacgacatcgacatttgtagttacattgaat 28745529  T
Q  322 tatgtg-atttttcaaattattagc 345  Q
    |||||| ||||||||||||||||||    
T  28745528 tatgtgaatttttcaaattattagc 28745504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 222 - 343
Target Start/End: Original strand, 4673354 - 4673476
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||||| ||||||| |||||||||||||| || ||||||| |   ||||||||||||| | ||| ||||| || ||||||||||| |||||||    
T  4673354 ctatgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgacatcaacaagacactgatacttgtaattacactgaat 4673453  T
Q  322 tatgtga-tttttcaaattatta 343  Q
    | | ||| |||||||||||||||    
T  4673454 tttatgattttttcaaattatta 4673476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 222 - 343
Target Start/End: Complemental strand, 11944795 - 11944673
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    |||||||||||   ||||| ||||||||||||||| ||| ||||||| || ||||||||  |||| | ||||||||||||||| | |||||| ||||| |    
T  11944795 ctatgaagcacgaacactcatcggattaggcgtgtctcggtgtcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactgagt 11944696  T
Q  322 tatgtgatttt-tcaaattatta 343  Q
    ||||||||||| |||||||||||    
T  11944695 tatgtgattttatcaaattatta 11944673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 21465542 - 21465416
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||||  ||||||||| |  |  ||| |||||| ||||||||||||||| ||||||||||| ||||||||||||| |  ||||    
T  21465542 ctatgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacacgacaccaacacttgtaattacatcgaat 21465443  T
Q  322 tatgtga-tttttcaaattattagctg 347  Q
    ||| ||| |||||||||||||||||||    
T  21465442 tatatgattttttcaaattattagctg 21465416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 219 - 344
Target Start/End: Original strand, 27067228 - 27067350
Alignment:
Q  219 caactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactg 318  Q
    |||||||||||||| | ||||||||||||||| |||  | || |||  ||||| |||||||||||||||||||||||||| ||||||||||||  ||| |    
T  27067228 caactatgaagcacggacactcctcggattagacgt--tccggtgttcgacacatgtcgtgtccgacaccgacacgacactgacacttgtaat--tacag 27067323  T
Q  319 aattatgtgatttt-tcaaattattag 344  Q
    |||||||| ||||| |||||| |||||    
T  27067324 aattatgtaattttctcaaatcattag 27067350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 329
Target Start/End: Complemental strand, 29447574 - 29447467
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||| |||||| | |||  || |||||||||| ||||||||| ||||||||||||||||| |||| | |||||| ||| |||    
T  29447574 ctatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacacgacaccaacacatataattacacttaat 29447475  T
Q  322 tatgtgat 329  Q
    ||||||||    
T  29447474 tatgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 24613579 - 24613525
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttttcaaattattagctg 347  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  24613579 cgacaccgacacttgtaattacacttaattatgtgatttttcaaattattagctg 24613525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 332
Target Start/End: Complemental strand, 11803391 - 11803279
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactga 319  Q
    ||||||||||||| | ||||||||||||||| |||||  |  |||||||||  |||||| ||| ||||| |||| ||||| |||| | |||||| |||||    
T  11803391 aactatgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacacaacaccaacacatataattacactga 11803292  T
Q  320 attatgtgatttt 332  Q
    |||||||||||||    
T  11803291 attatgtgatttt 11803279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 347
Target Start/End: Original strand, 13436953 - 13437019
Alignment:
Q  282 cgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    ||||||||||||||||||||||||||| ||||   |||||||||||| |||||||||||||||||||    
T  13436953 cgacaccgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctg 13437019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 332
Target Start/End: Original strand, 26902104 - 26902214
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||| ||| ||||||||  |  || | ||||| |||||||||||||||  | ||||||||||||| | |||||| |||||||    
T  26902104 ctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaat 26902203  T
Q  322 tatgtgatttt 332  Q
    |||||||||||    
T  26902204 tatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 30077387 - 30077445
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattagctgcgt 350  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  30077387 cgacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgt 30077445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 31557054 - 31557005
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtgatttttcaaattatta 343  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtgatttttcaaattatta 31557005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 4948711 - 4948659
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattag 344  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 333
Target Start/End: Original strand, 6065586 - 6065697
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||| | |||| ||||||| || |||||||||  ||||||||||||||  ||||||| |  ||  | ||||||||||||| ||    
T  6065586 ctatgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgacattgacacgatattgattcatgtaattatactgtat 6065685  T
Q  322 tatgtgattttt 333  Q
    ||||||||||||    
T  6065686 tatgtgattttt 6065697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 292 - 346
Target Start/End: Complemental strand, 8343032 - 8342977
Alignment:
Q  292 acgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattagct 346  Q
    |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  8343032 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagct 8342977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 36450694 - 36450765
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||||| |||||||||||||||||||||   | ||||||||||  ||||||||||||||| ||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacac 36450765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 363
Target Start/End: Original strand, 16641907 - 16642043
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactga 319  Q
    ||||||||||||||| |||||||||||||||| ||||  || |||  ||||| ||||||||      |||||||||||||||||| | |||  | ||| |    
T  16641907 aactatgaagcacagacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgt------ccgacacgacaccgacacatataacgacactaa 16642000  T
Q  320 attatgtg-atttttcaaattattagctgcgtgtcagtgtctgtg 363  Q
    |||||||| |||| |||||||||||| |  |||||||||||||||    
T  16642001 attatgtgtatttctcaaattattagtt--gtgtcagtgtctgtg 16642043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 24362173 - 24362255
Alignment:
Q  265 cggacacctgtcgtgtccg-acaccgacacgacaccgacacttgtaattatactgaattatgtgatt-tttcaaattattagc 345  Q
    ||||||| ||||||||||| ||||||||||||||  ||||| | |||||| |||||||||||||||| | |||||||||||||    
T  24362173 cggacacgtgtcgtgtccggacaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattattagc 24362255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 332
Target Start/End: Complemental strand, 18964309 - 18964197
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacg--acaccgacacttgtaattatactga 319  Q
    ||||||||||||| |||||||||||| |||||||| ||  |||  ||||  |||||||| | || ||||||||  |||||||||| | |||||| | |||    
T  18964309 ctatgaagcacagacactcctcggataaggcgtgtctccgtgttagacaggtgtcgtgttcaacgccgacacgacacaccgacacatataattacattga 18964210  T
Q  320 attatgtgatttt 332  Q
    |||||||||||||    
T  18964209 attatgtgatttt 18964197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 34450960 - 34451037
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacac 298  Q
    |||||||||||| | ||||||| |||| ||||||||  |  |||| ||||| ||||||||||||||||||||||||||    
T  34450960 actatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacgacac 34451037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 333
Target Start/End: Complemental strand, 24858135 - 24858031
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||||  |||||||| ||||||||||||  ||  || |||||| |||||||||||||||      |||| ||||||||||| ||| |||||||    
T  24858135 ctatgaagcacaaacactcctctgattaggcgtgtcccggcgtgggacacatgtcgtgtccgacac------gacaacgacacttgta-ttacactgaat 24858043  T
Q  322 tatgtgattttt 333  Q
    ||||||||||||    
T  24858042 tatgtgattttt 24858031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 25192350 - 25192402
Alignment:
Q  296 caccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    ||||||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctg 25192402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 40332248 - 40332200
Alignment:
Q  295 acaccgacacttgtaattatactgaattatgtgatttt-tcaaattatt 342  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 293
Target Start/End: Complemental strand, 5813707 - 5813640
Alignment:
Q  226 gaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||| | ||||||||  |||||||||||  || |||||||||| |||||||||||||||||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 5813640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 20873128 - 20873077
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattatta 343  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 315
Target Start/End: Original strand, 29655930 - 29656000
Alignment:
Q  245 gattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattata 315  Q
    |||||||||||||||| |||| || |  ||| ||||||||||| |||||||| || |||||||||||||||    
T  29655930 gattaggcgtgtttcggtgtcagatatgtgttgtgtccgacactgacacgacgcctacacttgtaattata 29656000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 345
Target Start/End: Complemental strand, 4611613 - 4611540
Alignment:
Q  273 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||| ||||||||  |||||| || | |||||| |||||||||||| ||||| |||||||||||||    
T  4611613 tgtcgtgtccgataccgacacagcaccgagacatataattacactgaattatgttattttctcaaattattagc 4611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 5307130 - 5307069
Alignment:
Q  282 cgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttttcaaattatta 343  Q
    |||||| |||||||||||||||||| | |||  | |||||||||| ||||||||||||||||    
T  5307130 cgacacggacacgacaccgacacttatgatttcattgaattatgtcatttttcaaattatta 5307069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 7442920 - 7442851
Alignment:
Q  277 gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||||||| || || ||||| ||||||||||||| |||||||||||| ||||| | |||||||||||    
T  7442920 gtgtccgacactgatacaacaccaacacttgtaattacactgaattatgtaattttatgaaattattagc 7442851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 3951476 - 3951547
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||| |  |||||| |||||||||||||| |  |||| ||||| ||||||||| |||||||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacac 3951547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 5813651 - 5813596
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    ||||||||||||||||| ||| ||| || ||||||| |||||||||||||||||||    
T  5813651 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctg 5813596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 342
Target Start/End: Original strand, 17468503 - 17468558
Alignment:
Q  288 cgacacgacaccgacacttgtaattatactgaattatgtgattttt-caaattatt 342  Q
    |||||||||||| ||||||||||||| || | |||||||||||||| |||||||||    
T  17468503 cgacacgacaccaacacttgtaattacaccgcattatgtgatttttacaaattatt 17468558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 20679396 - 20679447
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattag 344  Q
    ||||||||||||| |||||| |||||| ||||||||||| ||||||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattag 20679447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 22596053 - 22595998
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    ||||||| ||||||||||||| |||||||||||| | ||||| |||||||||||||    
T  22596053 cgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctg 22595998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 24669492 - 24669441
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgattt-ttcaaattatta 343  Q
    ||||||||||||||||||||| |||||||||||| ||||  |||||||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattatta 24669441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 30271287 - 30271346
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    |||||||||| | |||||||||||| |||| ||||||||| |||||||||| ||||||||    
T  30271287 gacacgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctg 30271346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 4298887 - 4298937
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtga-tttttcaaattatta 343  Q
    |||||||||||||||||||| | | |||||||||| |||||||||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattatta 4298937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 256
Target Start/End: Complemental strand, 11833969 - 11833935
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgt 256  Q
    ||||||||||||| |||||||||||||||||||||    
T  11833969 ctatgaagcacagacactcctcggattaggcgtgt 11833935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 333
Target Start/End: Complemental strand, 18407772 - 18407738
Alignment:
Q  299 cgacacttgtaattatactgaattatgtgattttt 333  Q
    ||||||||||||||| |||||||||||||||||||    
T  18407772 cgacacttgtaattacactgaattatgtgattttt 18407738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 22943303 - 22943349
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtcc 282  Q
    |||||||||||||||||||||  || |||||||||| ||||||||||    
T  22943303 cactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 22943349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 256
Target Start/End: Complemental strand, 25566949 - 25566915
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgt 256  Q
    ||||||||||||| |||||||||||||||||||||    
T  25566949 ctatgaagcacagacactcctcggattaggcgtgt 25566915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 26434237 - 26434187
Alignment:
Q  295 acaccgacacttgtaattatactgaattatgtgatttt-tcaaattattag 344  Q
    |||||||||||| |||||||| |||||||||||||||| ||||| ||||||    
T  26434237 acaccgacacttttaattatattgaattatgtgattttctcaaactattag 26434187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 304
Target Start/End: Complemental strand, 28819321 - 28819239
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacac 304  Q
    ||||||||||||   |||||||||||||| |||||| || ||| ||| || | ||||||| ||||||||||| | ||||||||    
T  28819321 ctatgaagcacatatactcctcggattagccgtgttccggtgttggatacatatcgtgtctgacaccgacacaaaaccgacac 28819239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 43737752 - 43737822
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||| | ||||||| |||| |||||| |  |  |||| |||||||||||||||||||||||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacac 43737822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 926730 - 926799
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||| | |||||||||||| | || |||  || |||||||||| ||||| |||||||||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacac 926799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 3025610 - 3025557
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||| ||||| | |||||| |||||||||||||||||| |||||||||||||    
T  3025610 cgacactgacacctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 293
Target Start/End: Complemental strand, 3025668 - 3025599
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||| | ||||||||||||||| |||||  |  |||| ||||| ||||||||||||||| |||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacac 3025599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 8343086 - 8343033
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgt 275  Q
    ||||||||||||| ||||| |||||||||||||||  || |||||||||| |||    
T  8343086 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacatgt 8343033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 13844596 - 13844649
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||| | |||||| ||| |||||||||||||| |||||||||||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagc 13844649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 304
Target Start/End: Original strand, 24205749 - 24205830
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacac 304  Q
    |||||| ||| | |||||||||||||||||||||| || |||| ||||   || |||| |||||||||||| ||||| ||||    
T  24205749 tatgaaacacggacactcctcggattaggcgtgttccggtgtcagacatgcgttgtgttcgacaccgacacaacaccaacac 24205830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 24727695 - 24727806
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt--- 332  Q
    |||| |||||||||||||||||  | | | |||||| |||| ||| ||| ||||||| |||||  ||||||| ||||| |||| ||||||| |||||       
T  24727695 cacttctcggattaggcgtgttctggtattggacacgtgtcatgttcgataccgacatgacactaacacttgaaattacactgcattatgtaattttttt 24727794  T
Q  333 tcaaattattag 344  Q
    ||||||||||||    
T  24727795 tcaaattattag 24727806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 34897144 - 34897091
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||| |||||| | |||||| |||||||||||||||||| |||||||||||||    
T  34897144 cgacatcgacacatataattacactgaattatgtgattttctcaaattattagc 34897091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 35519797 - 35519862
Alignment:
Q  283 gacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    |||||||||||||||| ||||| |  | ||||||  |||||||||| |||||||||||||||||||    
T  35519797 gacaccgacacgacactgacacatacatttatacaaaattatgtgattttttcaaattattagctg 35519862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 40332296 - 40332239
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||||||||||| ||  || ||| |||||| |||||||||| ||||||||||    
T  40332296 cactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacac 40332239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 343
Target Start/End: Original strand, 41831946 - 41831991
Alignment:
Q  299 cgacacttgtaattatactgaattatgtga-tttttcaaattatta 343  Q
    ||||||||||| ||| |||||||||||||| |||||||||||||||    
T  41831946 cgacacttgtagttacactgaattatgtgattttttcaaattatta 41831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 28384977 - 28385045
Alignment:
Q  276 cgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattt-ttcaaattatta 343  Q
    |||||| ||||| |||| ||||||||||| | |||||| ||||||||||| ||||| |||| |||||||    
T  28384977 cgtgtctgacactgacatgacaccgacacatataattacactgaattatgagatttattcatattatta 28385045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 344
Target Start/End: Original strand, 36450762 - 36450806
Alignment:
Q  301 acacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||||    
T  36450762 acacttgtaattacactgaattctgtgattttttcaaattattag 36450806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 24339772 - 24339646
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||||||||||||||||  || ||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 24339673  T
Q  322 tatgtgat-ttttcaaattattagctg 347  Q
    |||||||| ||||||||||||||||||    
T  24339672 tatgtgattttttcaaattattagctg 24339646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 350
Target Start/End: Original strand, 26033404 - 26033519
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttc 334  Q
    |||||||||||||||| ||||  || | |||||||| |||| |||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  26033404 cactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaattatgtgattttttc 26033503  T
Q  335 aaattattagctgcgt 350  Q
    ||||||||||||||||    
T  26033504 aaattattagctgcgt 26033519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 221 - 333
Target Start/End: Complemental strand, 2334380 - 2334269
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaa 320  Q
    |||||||| ||| | ||||||||||||||| ||||||||  |||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| ||    
T  2334380 actatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac-gacacgacaccgacacttgtaattacactaaa 2334282  T
Q  321 ttatgtgattttt 333  Q
    |||||||||||||    
T  2334281 ttatgtgattttt 2334269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 222 - 347
Target Start/End: Original strand, 5409771 - 5409891
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||||||||||||||||  || |||||||||| ||||||||||||      ||||||||||||||||||||||  |||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccga------cacgacaccgacacttgtaattgcactgaat 5409864  T
Q  322 tatgtga-tttttcaaattattagctg 347  Q
    ||||||| |||||||||||||||||||    
T  5409865 tatgtgattttttcaaattattagctg 5409891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 11665370 - 11665492
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    |||||||||| | || |||||| |||||  |||||||| |||||||||| |||||||| ||||||||||| |||| |||||||| |||||| ||||||||    
T  11665370 tatgaagcacggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaatt 11665469  T
Q  323 atgtga-tttttcaaattattag 344  Q
    |||||| ||||||||||||||||    
T  11665470 atgtgattttttcaaattattag 11665492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 222 - 359
Target Start/End: Complemental strand, 9778624 - 9778494
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||| |||||||||||||  || |||||||||| ||| |||||||||||      ||||||||||||||||||||||||||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacac------gacaccgacacttgtaattatactgaat 9778531  T
Q  322 tatgtgat-ttttcaaattattagctgcgtgtcagtgtc 359  Q
    |||||||| |||||||||||| ||||  |||||||||||    
T  9778530 tatgtgattttttcaaattatcagct--gtgtcagtgtc 9778494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 343
Target Start/End: Original strand, 9408265 - 9408385
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatta 323  Q
    ||||||||| | || || ||||||||||||||||| | ||||||| |  | ||||||| |||||||| |||||||||||||||||||||| ||| |||||    
T  9408265 atgaagcacggacattcttcggattaggcgtgttttggtgtcggatatatatcgtgtctgacaccgatacgacaccgacacttgtaattacactaaatta 9408364  T
Q  324 tgtga-tttttcaaattatta 343  Q
    ||||| |||||||||||||||    
T  9408365 tgtgattttttcaaattatta 9408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 236 - 345
Target Start/End: Complemental strand, 32308236 - 32308126
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tc 334  Q
    |||||||||||||||  |||| ||| |||||||||  |||||||||| ||||||||||||||| ||||| |  ||||| |||||||||||||||||| ||    
T  32308236 cactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctc 32308137  T
Q  335 aaattattagc 345  Q
    |||||||||||    
T  32308136 aaattattagc 32308126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 344
Target Start/End: Complemental strand, 25822786 - 25822662
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaa 320  Q
    |||||||| ||| | |||||||  |||||||| |||  ||||||| ||||| |||||||||||| ||||| |||||||||||||||||||||| ||||||    
T  25822786 actatgaaacacggacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaa 25822687  T
Q  321 ttatg-tgatttttcaaattattag 344  Q
    || || |  ||||||||||||||||    
T  25822686 ttgtgattttttttcaaattattag 25822662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 222 - 347
Target Start/End: Original strand, 43027404 - 43027524
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||| |||||||||||||||  || |||||||||| ||||||||| ||||      ||||||||||||||||| ||| |||| ||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgaca------cgacaccgacacttgtatttacactgcat 43027497  T
Q  322 tatgtga-tttttcaaattattagctg 347  Q
    ||||||| |||||||||||||||||||    
T  43027498 tatgtgattttttcaaattattagctg 43027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 219 - 344
Target Start/End: Original strand, 32093951 - 32094073
Alignment:
Q  219 caactatgaagcacagccactcctcggattaggcgtgtttc-gatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatact 317  Q
    ||||||||||||||   |||||||||||||||||||||  | | |||||||||| ||||||||||||      ||||||||||||| ||||||||| |||    
T  32093951 caactatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccga------cacgacaccgacatttgtaattacact 32094044  T
Q  318 gaattatgtga--tttttcaaattattag 344  Q
    |||||||||||  ||||||||||||||||    
T  32094045 gaattatgtgatttttttcaaattattag 32094073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 245 - 333
Target Start/End: Complemental strand, 21560610 - 21560522
Alignment:
Q  245 gattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||||||| |||  ||||  | ||||||  |||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  21560610 gattaggcgtgtttcggtgttagacatgtatcgtgtttgacaccgatacgacaccgacacttgtaattacactgaattatgtgattttt 21560522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 326
Target Start/End: Complemental strand, 4795018 - 4794915
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    |||||||||||| |||| || ||||||| ||||||| | |||| || || |||||||||||||||||| |||  |||||||||| |||||| ||||||||    
T  4795018 tatgaagcacagacacttcttggattagacgtgtttaggtgtcagatacgtgtcgtgtccgacaccgatacggtaccgacacttataattacactgaatt 4794919  T
Q  323 atgt 326  Q
    ||||    
T  4794918 atgt 4794915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 21930760 - 21930633
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactga 319  Q
    ||||||||||||  | | ||| |||||||||| ||||| ||  ||||||||| | | |||||| |||| ||||||||| ||||||||||||||| | |||    
T  21930760 aactatgaagcatggactctcttcggattaggtgtgttccggcgtcggacacgtcttgtgtccaacactgacacgacatcgacacttgtaattaaaatga 21930661  T
Q  320 attatgtgatttttcaaattattagctg 347  Q
    ||||| | |||||| |||||||||||||    
T  21930660 attatctaattttttaaattattagctg 21930633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 7058540 - 7058433
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttc 334  Q
    ||||||| ||||||||||||| || ||||||||||  ||| ||||||||   |||||||||||| ||||||||||||| |||||||||  ||| ||||||    
T  7058540 cactccttggattaggcgtgtgtcaatgtcggacatgtgttgtgtccgat--cgacacgacaccaacacttgtaattacactgaattacatgattttttc 7058443  T
Q  335 aaattattag 344  Q
    ||||||||||    
T  7058442 aaattattag 7058433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 222 - 343
Target Start/End: Complemental strand, 7438836 - 7438714
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||| | |||||||||||     ||||| |||  ||||||||  |||||||||| |||||||||||||||||||| | |||||    
T  7438836 ctatgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgacatgacaccgacacttgtaattacattgaat 7438737  T
Q  322 tatgtgat-ttttcaaattatta 343  Q
    |||||||| ||||||||||||||    
T  7438736 tatgtgattttttcaaattatta 7438714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 227 - 347
Target Start/End: Complemental strand, 13770810 - 13770695
Alignment:
Q  227 aagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgt 326  Q
    |||||| | ||||| |||||||||||||||| || |||||||||| ||| |||||||||||      |||| ||||||||||||||| ||||||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacac------gacaacgacacttgtaattacactgaattatgt 13770717  T
Q  327 ga-tttttcaaattattagctg 347  Q
     | ||||| |||||||||||||    
T  13770716 aatttttttaaattattagctg 13770695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 18039067 - 18039006
Alignment:
Q  284 acaccgacacgacaccgacacttgtaattatactgaattatgtgat--ttttcaaattatta 343  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  18039067 acaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 3991384 - 3991331
Alignment:
Q  292 acgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattag 344  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtgattttttcaaattattag 3991331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 11272569 - 11272637
Alignment:
Q  276 cgtgtccgacaccgacacgacaccgacacttgtaattatactgaat--tatgtga-tttttcaaattat 341  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||||||||||||    
T  11272569 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaattat 11272637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 15680928 - 15680857
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||| | ||||||||| ||||| ||||| ||| |||||||||| |||||||||||||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 15680857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 11061077 - 11061131
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctg 11061131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 18215182 - 18215244
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctgcgt 350  Q
    |||||||||||||||||||||| || |||| ||||||||| ||||||||||||||||||||||    
T  18215182 gacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgt 18215244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 6630855 - 6630964
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttc 334  Q
    |||||||| ||||||| |||| | | |||||| ||| ||| |||||||||||| |||||||| |||||| | |||||| ||||||||| |||| ||| ||    
T  6630855 cactcctcagattaggtgtgtcttggtgtcgggcacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctc 6630954  T
Q  335 aaattattag 344  Q
    ||||||||||    
T  6630955 aaattattag 6630964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 344
Target Start/End: Complemental strand, 11831540 - 11831439
Alignment:
Q  244 ggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattatt 342  Q
    |||||||||||| | || ||||  |||| |||||||||||||||||| |||||||  | ||||||||||| ||| |||||| ||| ||||||||||||||    
T  11831540 ggattaggcgtgctccggtgtcaaacacatgtcgtgtccgacaccgatacgacacgaatacttgtaattacactaaattatatgattttttcaaattatt 11831441  T
Q  343 ag 344  Q
    ||    
T  11831440 ag 11831439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 27945104 - 27945048
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattag 344  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattag 27945048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 598327 - 598256
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||| | |||| ||||||||||||||||  || |||||||||| ||||||||| |||||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 598256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 343
Target Start/End: Complemental strand, 6028732 - 6028633
Alignment:
Q  245 gattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattatta 343  Q
    |||||||||||| ||  ||||| || | |||||||| |||||| ||||||||||||||| ||||||||| | | |||||||| || ||||||||||||||    
T  6028732 gattaggcgtgtctcagtgtcgaactcgtgtcgtgttcgacactgacacgacaccgacatttgtaattacattaaattatgttatattttcaaattatta 6028633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 343
Target Start/End: Complemental strand, 15902901 - 15902830
Alignment:
Q  273 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattatta 343  Q
    |||||||||||| |||||||| |||||||||| | |||||| ||| |||||||||||||| |||||||||||    
T  15902901 tgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 21864927 - 21864856
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||||| ||||||||| ||||| |||||  || |||||||||| |||||||||||||| ||||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacac 21864856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 25481961 - 25481906
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattagctg 347  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  25481961 cgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctg 25481906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 343
Target Start/End: Original strand, 26329354 - 26329433
Alignment:
Q  265 cggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattatta 343  Q
    ||||||| ||||||||| |||||||||||||| ||||||| | |||||| |||||||| |||| |||| |||||||||||    
T  26329354 cggacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattatta 26329433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 344
Target Start/End: Complemental strand, 13300487 - 13300417
Alignment:
Q  275 tcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    |||||| ||||||||||| |||||||| ||| ||||||| |||||||||| ||| ||||||||||||||||    
T  13300487 tcgtgttcgacaccgacatgacaccgagactggtaattacactgaattatatgattttttcaaattattag 13300417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 223 - 293
Target Start/End: Complemental strand, 20549909 - 20549839
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||| | ||||||||||||||||||||| ||  |||||||||  ||| |||||||||||||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacac 20549839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 32287404 - 32287474
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||| | |||||||||||||||| ||||  || |||||||||| |||| ||||||||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacac 32287474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 343
Target Start/End: Original strand, 38134335 - 38134457
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||||  |||||||||||||||||||||  |||||||| | || | ||| |||| ||||| ||| || |||||||| | | |||| | |||||    
T  38134335 ctatgaagcacatacactcctcggattaggcgtgtcccgatgtcgaatacttatcgagtccaacacccacatgagaccgacacatatgattacattgaat 38134434  T
Q  322 tatgtgatttt-tcaaattatta 343  Q
    ||||| ||||| |||||||||||    
T  38134435 tatgtcattttctcaaattatta 38134457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 21880211 - 21880158
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||||||||||||||||| |||||||||||| ||||| |||||||||||||    
T  21880211 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagc 21880158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 1885648 - 1885592
Alignment:
Q  277 gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||| ||||||||||||||||||| |||| | |||||||||| ||||||    
T  1885648 gtgtccgacaccaacacgacaccgacacttgtgattacattgaattatgtcattttt 1885592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 347
Target Start/End: Complemental strand, 19992061 - 19992005
Alignment:
Q  292 acgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagctg 347  Q
    ||||||||||||||| |||||| |||||| ||||||||||| |||||||||||||||    
T  19992061 acgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctg 19992005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 27229280 - 27229360
Alignment:
Q  262 tgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttttcaaattatt 342  Q
    ||||| |||| | ||||||| ||||  ||||||||||||| |||| |||||| ||| |||||||||||||| |||||||||    
T  27229280 tgtcgaacacgtatcgtgtctgacagtgacacgacaccgatacttataattacactaaattatgtgattttacaaattatt 27229360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 19206119 - 19206056
Alignment:
Q  283 gacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||| ||| ||||||||||| | |||||||| |||||||||||||||| |||||||||||||    
T  19206119 gacaccaacaagacaccgacacatataattataatgaattatgtgattttctcaaattattagc 19206056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 21880271 - 21880200
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||| | |||| ||||||||||||||||   | |||||||||  |||||||||||||||||||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacac 21880200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 29763129 - 29763187
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgt 280  Q
    ||||||||||| | |||||||||||||||||||||   |||||||||||| ||||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 3721152 - 3721099
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||| | |||||||||| |||||||||||||| |||||||||||||    
T  3721152 cgacaccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 9933352 - 9933282
Alignment:
Q  273 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    |||||||||||||||||||||||||| |||||   ||| | ||||||| ||||||| ||||||||||||||||    
T  9933352 tgtcgtgtccgacaccgacacgacactgacac--ataagtttactgaaatatgtgattttttcaaattattag 9933282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 26733363 - 26733310
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||| | |||||| |||||||||||||||||| |||||||||||||    
T  26733363 cgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagc 26733310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 28155629 - 28155576
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||||||||||||||||| || ||||||||| ||||| |||||||||||||    
T  28155629 cgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagc 28155576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 30813916 - 30813867
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacac 271  Q
    ||||||||||| | ||||||||||||||||||||||  ||||||||||||    
T  30813916 ctatgaagcacggacactcctcggattaggcgtgttctgatgtcggacac 30813867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 17852120 - 17852056
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgac 285  Q
    |||||||||||| | ||||||||| |||||| |||| ||| |||||||||| |||| ||||||||    
T  17852120 actatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtcatgtccgac 17852056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 22602705 - 22602749
Alignment:
Q  288 cgacacgacaccgacacttgtaattatactgaattatgtgatttt 332  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgatttt 22602749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 343
Target Start/End: Complemental strand, 1433578 - 1433462
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||||||||||| |||||   | |||||||||| |||| |||      |||||||||||||||||| | |||||| ||  |||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgt------ccgacacgacaccgacacatataattacaccaaat 1433485  T
Q  322 tatgtgatttt-tcaaattatta 343  Q
     |||||||||| |||||||||||    
T  1433484 gatgtgattttctcaaattatta 1433462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 24105797 - 24105726
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||||  |||||||||| ||||||||||  || |||||||||| ||| ||| ||||| |||||||    
T  24105797 ctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacac 24105726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 7328686 - 7328744
Alignment:
Q  288 cgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||||||||||||| | |||||| ||| |||||||| ||||| |||||||||||||    
T  7328686 cgacacgacaccgacacatataattacactaaattatgttattttctcaaattattagc 7328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 343
Target Start/End: Original strand, 35297669 - 35297723
Alignment:
Q  290 acacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattatta 343  Q
    |||||||||| |||| | |||||||| |||||||||||||||| |||||||||||    
T  35297669 acacgacaccaacacatataattataatgaattatgtgattttctcaaattatta 35297723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 38804489 - 38804567
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtc-gtgtccgacaccgacacgacacc 299  Q
    ||||||||||||  ||||||||||||||||| |||  ||  |||||||||  ||| |||||||||||| ||||||||||    
T  38804489 ctatgaagcacatacactcctcggattaggcatgtcccggcgtcggacacacgtcggtgtccgacaccaacacgacacc 38804567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 8234243 - 8234198
Alignment:
Q  244 ggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccg 289  Q
    ||||||||||||| ||| |||||||||  |||||||||||||||||    
T  8234243 ggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccg 8234198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 11890913 - 11890970
Alignment:
Q  287 ccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattatta 343  Q
    ||||||||||||| |||||  |||||| |||||||||| ||| |||||||||||||||    
T  11890913 ccgacacgacacctacactcataattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 16341561 - 16341504
Alignment:
Q  287 ccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattatta 343  Q
    |||||||||||||| ||| | |||||| ||| |||||||||||||| |||||||||||    
T  16341561 ccgacacgacaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 19213862 - 19213809
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattagc 345  Q
    ||||||||||||||||| ||| |||| |||||||||| |||| |||||||||||    
T  19213862 cgacaccgacacttgtatttacactgcattatgtgattttttaaaattattagc 19213809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 20549850 - 20549797
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||| | |||||| ||||||||| |||||||| |||||||||||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttctcaaattattagc 20549797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 255
Target Start/End: Original strand, 23128603 - 23128636
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtg 255  Q
    ||||||||||||| ||||||||||||||||||||    
T  23128603 ctatgaagcacagacactcctcggattaggcgtg 23128636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 33994270 - 33994213
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctgcgt 350  Q
    |||||||||||||||||||  ||||||||||||||  ||||||||||| ||| |||||    
T  33994270 gacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgt 33994213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 33994317 - 33994260
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||| ||||||||||||| ||| ||| |||||  ||||||||| |||||||||||    
T  33994317 cactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacac 33994260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 344
Target Start/End: Original strand, 40131991 - 40132020
Alignment:
Q  315 actgaattatgtgatttttcaaattattag 344  Q
    ||||||||||||||||||||||||||||||    
T  40131991 actgaattatgtgatttttcaaattattag 40132020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 345
Target Start/End: Complemental strand, 1401083 - 1401031
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagc 345  Q
    |||||||| |||| |||||| |||||||||||||| ||| |||||||||||||    
T  1401083 gacaccgatacttataattacactgaattatgtgagtttctcaaattattagc 1401031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 6490837 - 6490785
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacc 272  Q
    ||||||||||||| | |||||||||||||| ||||||  || |||||||||||    
T  6490837 aactatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacacc 6490785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 8234205 - 8234153
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    |||||||| ||||||||| || |||||||||||| | ||||||||||||||||    
T  8234205 cgacaccggcacttgtaactacactgaattatgttattttttcaaattattag 8234153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 345
Target Start/End: Complemental strand, 24146874 - 24146822
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||||||| | |||||||| |||||||||||||||| | |||||||||||    
T  24146874 gacaccgacacatataattatattgaattatgtgattttctaaaattattagc 24146822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 89)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 333
Target Start/End: Complemental strand, 47989629 - 47989516
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactga 319  Q
    ||||||||||||| | |||||||||||||||||||||  ||||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  47989629 aactatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactga 47989530  T
Q  320 attatgtgattttt 333  Q
    ||||||||||||||    
T  47989529 attatgtgattttt 47989516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 222 - 346
Target Start/End: Original strand, 31694639 - 31694766
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||| ||||||||||||| || ||||| | |  ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31694639 ctatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 31694738  T
Q  322 tatgtga---tttttcaaattattagct 346  Q
    |||||||   ||||||||||||||||||    
T  31694739 tatgtgattttttttcaaattattagct 31694766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 223 - 343
Target Start/End: Complemental strand, 21032335 - 21032215
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    |||||||||||| ||||||| ||||||||||| | |||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||| | ||||    
T  21032335 tatgaagcacagacactccttggattaggcgtctctcgatgtcggacacatgtcgtgtccgacacccacacgacaccgacatttgtaattatatttaatt 21032236  T
Q  323 atgtgatttttcaaattatta 343  Q
    | || ||||||  ||||||||    
T  21032235 aagtaatttttttaattatta 21032215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 224 - 347
Target Start/End: Original strand, 1486646 - 1486764
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatta 323  Q
    ||||||||||| |||||||||||||||||||||  || |||||||||| ||||||||||||      |||||||||||||||| |||||| |||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccga------cacgacaccgacacttataattacactgaatta 1486739  T
Q  324 tgtga-tttttcaaattattagctg 347  Q
    ||||| |||||||||||||||||||    
T  1486740 tgtgattttttcaaattattagctg 1486764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 9828174 - 9828051
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||||||||||| |||||  || |||||||||| ||||||||| ||||| |||||||||||||||| |  ||||| |||||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaat 9828075  T
Q  322 tatgtgatttt-tcaaattattag 344  Q
    ||||||||||| ||||||||||||    
T  9828074 tatgtgattttatcaaattattag 9828051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 40917879 - 40917755
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | || ||||||||||||||||||  || |||||||||| |||||||||| |||||||||||||||||| ||||||||||| ||| |||    
T  40917879 ctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat 40917780  T
Q  322 tatgtga-tttttcaaattattagctg 347  Q
      ||||| |||||||||||||||||||    
T  40917779 --tgtgattttttcaaattattagctg 40917755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 236 - 343
Target Start/End: Original strand, 6612114 - 6612222
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttc 334  Q
    ||||||| |||||||||||||   | |||||||||| | |||||||||||| |||||||||||||||||||||||||| |||||||||||| | ||||||    
T  6612114 cactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttc 6612213  T
Q  335 aaattatta 343  Q
    |||||||||    
T  6612214 aaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 5944413 - 5944285
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    |||||||||||   ||||||||||||||||||| |  || |||||||||  ||| ||||||| || ||||||||||||||||||| |||||| |||||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaat 5944314  T
Q  322 tatgtgat---ttttcaaattattagctg 347  Q
    ||||||||   ||||||||||||||||||    
T  5944313 tatgtgattttttttcaaattattagctg 5944285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 222 - 333
Target Start/End: Complemental strand, 6427594 - 6427483
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||| || ||||||||||||  || |||||||||| ||||||||||||| || ||||||||| |||||||||| ||| | |||||    
T  6427594 ctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattgaat 6427495  T
Q  322 tatgtgattttt 333  Q
    ||||||||||||    
T  6427494 tatgtgattttt 6427483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 18556381 - 18556511
Alignment:
Q  218 gcaactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatact 317  Q
    ||||||||||||||| | |||| ||||||||||||||||  |  ||||||| || ||||| ||| ||||||| ||||||||| | ||||||||||| | |    
T  18556381 gcaactatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacatt 18556480  T
Q  318 gaattatgtgat-ttttcaaattattagctg 347  Q
     ||||||||||| ||||||||||||||||||    
T  18556481 aaattatgtgatattttcaaattattagctg 18556511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 222 - 341
Target Start/End: Complemental strand, 25362012 - 25361896
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||| ||||||||||  |||| || |||||||||  |||||||||||||||||||||||||| ||||| | |||||| |||||||    
T  25362012 ctatgaagcacggacactcttcggattagg--tgttccggtgtcggaca--tgtcgtgtccgacaccgacacgacactgacacatataattacactgaat 25361917  T
Q  322 tatgtgatttt-tcaaattat 341  Q
    ||||||||||| |||||||||    
T  25361916 tatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 32461393 - 32461515
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||| || |||||||||||||  |  |||| ||||| ||||||||||||||||||||| ||||| ||||||||||||| | | |||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaat 32461491  T
Q  322 tatgtga-tttttcaaattattag 344  Q
    ||||||| ||||||||||||||||    
T  32461492 tatgtgattttttcaaattattag 32461515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 344
Target Start/End: Complemental strand, 6332740 - 6332678
Alignment:
Q  282 cgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttttcaaattattag 344  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  6332740 cgacaccaacacgacaccgatacttgtaattacactgaattatgtgatttttcaaattattag 6332678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 273 - 341
Target Start/End: Complemental strand, 44482309 - 44482240
Alignment:
Q  273 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattat 341  Q
    |||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||||||    
T  44482309 tgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 345
Target Start/End: Original strand, 9629869 - 9629953
Alignment:
Q  262 tgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||  |||||||||||||| ||||||||||||||||||| |||| | |||||||||| ||||||| |||||||||||||    
T  9629869 tgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagc 9629953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 15449215 - 15449279
Alignment:
Q  276 cgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttttcaaatta 340  Q
    ||||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  15449215 cgtgtccgacaccgatacgacacagacacttgtaattacactaaattatgtgatttttcaaatta 15449279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 22515825 - 22515942
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactga 319  Q
    ||||||||||||| | ||||||||||||||||||||| ||| ||||||| |  |||||||||           ||||||||||||||||||||| ||| |    
T  22515825 aactatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtc-----------cgacaccgacacttgtaattacactaa 22515913  T
Q  320 attatgtga-tttttcaaattattagctg 347  Q
    ||||||||| |||||||||||||||||||    
T  22515914 attatgtgattttttcaaattattagctg 22515942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 17778658 - 17778553
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttc 334  Q
    |||| |||||||||||| |||  || |||||||||| |||||    |||||||||||||||||||||||||||||||| ||||   ||||||| ||||||    
T  17778658 cacttctcggattaggcatgtcccggtgtcggacacgtgtcg----cgacaccgacacgacaccgacacttgtaattacactg---tatgtgattttttc 17778566  T
Q  335 aaattattagctg 347  Q
    |||||||||||||    
T  17778565 aaattattagctg 17778553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 46348321 - 46348394
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||||| | ||| |||||||| |||||||| ||| |||||||||| |||||||||||||||||||||    
T  46348321 aactatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 46348394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 113363 - 113303
Alignment:
Q  288 cgacacgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattagctg 347  Q
    |||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  113363 cgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctg 113303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 24577182 - 24577238
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 24577238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 266 - 345
Target Start/End: Complemental strand, 34371799 - 34371720
Alignment:
Q  266 ggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttttcaaattattagc 345  Q
    |||||| |||||| ||||||||| ||||||||||||||| | |||||| ||||||||||||||||||   ||||||||||    
T  34371799 ggacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgattttctcaattattagc 34371720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 37598950 - 37598879
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||| | |||||||||||||||||||||  |  |||||||||| |||||||||||||||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacac 37598879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 5376483 - 5376553
Alignment:
Q  276 cgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||| | |||||||||||    
T  5376483 cgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagc 5376553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 332
Target Start/End: Complemental strand, 25934746 - 25934636
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||| |||| |||||| |  |  |||| ||||| ||||||||||||||||||||||| |||||||| | |||||| |||| ||    
T  25934746 ctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtat 25934647  T
Q  322 tatgtgatttt 332  Q
    | |||||||||    
T  25934646 tttgtgatttt 25934636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 30173732 - 30173802
Alignment:
Q  263 gtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    ||||||||  |||||||||||| || ||||||||||||||||||||||||| ||||| |||||| ||||||    
T  30173732 gtcggacatgtgtcgtgtccgatacggacacgacaccgacacttgtaattacactgagttatgtaattttt 30173802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 1704988 - 1705044
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattag 1705044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 345
Target Start/End: Original strand, 27471535 - 27471619
Alignment:
Q  262 tgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||| |||||| ||| ||||||| | |||||| |||| |||||||| ||||||||||||| |||| |||||||||||||    
T  27471535 tgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagc 27471619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 28273068 - 28273128
Alignment:
Q  273 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||||| ||| | |||||||||||||||||||| |||||||||| ||||||||    
T  28273068 tgtcgtgtccgacatcgataggacaccgacacttgtaattacactgaattatatgattttt 28273128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 347
Target Start/End: Original strand, 14359529 - 14359576
Alignment:
Q  300 gacacttgtaattatactgaattatgtgatttttcaaattattagctg 347  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  14359529 gacacttgtaattacactaaattatgtgatttttcaaattattagctg 14359576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 18471355 - 18471302
Alignment:
Q  297 accgacacttgtaattatactgaattatgtgat---ttttcaaattattagctg 347  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  18471355 accgacacttgtaattatactgaattatgtgattttttttcaaattattagctg 18471302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 38078661 - 38078716
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    ||||||||||||||||||||| | |||||||||||| |||||||||||||||||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctg 38078716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 5927281 - 5927351
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||| | |||||||| |||||||| |||||||||||||||||  |||| |||||||||| |||||    
T  5927281 tatgaagcacggacactcctcagattaggcatgtttcgatgtcggacatttgtcatgtccgacactgacac 5927351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 293 - 342
Target Start/End: Complemental strand, 18337388 - 18337338
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattatt 342  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  18337388 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 31015097 - 31015047
Alignment:
Q  298 ccgacacttgtaattatactgaattatgtgatttt-tcaaattattagctg 347  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctg 31015047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 40258934 - 40258984
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtga-tttttcaaattatta 343  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 51410084 - 51410031
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat--ttttcaaattattag 344  Q
    ||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  51410084 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattag 51410031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 42359391 - 42359460
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||| | |||||||||||||||||||||  || ||||||||||  ||| ||||||||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacac 42359460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 22881616 - 22881668
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 22881668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 42359449 - 42359501
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattag 42359501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 51410129 - 51410073
Alignment:
Q  237 actcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||| ||||||||||||| ||| ||||||| || |||||||||||||||||||||    
T  51410129 actccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacac 51410073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 333
Target Start/End: Complemental strand, 1815315 - 1815276
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttt 1815276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 345
Target Start/End: Original strand, 6414932 - 6415054
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    |||||||||| | |||||||||||| |   ||||  || |||| ||||| |||||||||||||| ||| | ||||||||||| | |||||| |||| |||    
T  6414932 tatgaagcacggacactcctcggatgaaatgtgtcgcggtgtcagacacgtgtcgtgtccgacatcga-atgacaccgacacatctaattaaactgtatt 6415030  T
Q  323 atgtgatttt-tcaaattattagc 345  Q
    |||||||||| |||||| ||||||    
T  6415031 atgtgattttctcaaataattagc 6415054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 8010278 - 8010341
Alignment:
Q  284 acaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagct 346  Q
    |||||||||| ||| |||||||| ||||||||||||||||| | | ||||||||||||||||||    
T  8010278 acaccgacacaacatcgacacttataattatactgaattatataattttttcaaattattagct 8010341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 19058856 - 19058911
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattagctg 347  Q
    ||||||||||||||||||||| |||||||||||| || |||| |||||||||||||    
T  19058856 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctg 19058911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 31672895 - 31672950
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    ||||||||| ||||||||||| ||||||||| |||| |||||||||||||||||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctg 31672950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 46348383 - 46348438
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    ||||||||||||||||||||| ||| |||||| ||| |||||||||||||||||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctg 46348438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 343
Target Start/End: Original strand, 16164244 - 16164366
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||| ||||  ||||| |||||||||||||||   | |||||||||| ||| | |||| ||||| ||||||||  ||||| | |||||| | | |||    
T  16164244 ctatgaaacacatacactcttcggattaggcgtgtcctggtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaat 16164343  T
Q  322 tatgtga-tttttcaaattatta 343  Q
    ||||||| |||||||||||||||    
T  16164344 tatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 35919270 - 35919316
Alignment:
Q  287 ccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||||    
T  35919270 ccgacacgacacggacacttataattacactgaattatgtgattttt 35919316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 345
Target Start/End: Original strand, 17831476 - 17831584
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtc-gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-t 333  Q
    |||||||  ||||||||||||  || |||||||||| |||| ||||||||||| |||||||   |||||| | | |||| ||||||| |||||||||| |    
T  17831476 cactcctaagattaggcgtgtcccggtgtcggacacatgtcggtgtccgacactgacacga---cgacacatatgattacactgaataatgtgattttct 17831572  T
Q  334 caaattattagc 345  Q
    ||||||||||||    
T  17831573 caaattattagc 17831584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 21378635 - 21378582
Alignment:
Q  295 acaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    ||||||||||||||||||| |||||||||||| | |||||||| ||||||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctg 21378582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 41877470 - 41877523
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagc 41877523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 7918207 - 7918263
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattag 344  Q
    |||||||||| ||||| | |||||| |||||||||||||||||| ||||||||||||    
T  7918207 gacacgacactgacacatataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 288
Target Start/End: Original strand, 16297223 - 16297287
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacacc 288  Q
    ||||||||| | |||||||||||||||||||||   | ||||||||||  |||||||||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacacc 16297287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 21038161 - 21038089
Alignment:
Q  274 gtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||||||||||||||||||||| ||| | | | |||| |||||||||||| ||||| | |||||||||||    
T  21038161 gtcgtgtccgacaccgacacgacactgacgcatatgattacactgaattatgtaattttcttaaattattagc 21038089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 345
Target Start/End: Complemental strand, 36878519 - 36878467
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||||||| | |||||| |||||||||||||||||| |||||||||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagc 36878467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 1815376 - 1815305
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||| ||| | |||||||| ||||||||||||  || |||||||||  ||||||||| |||||||||||    
T  1815376 ctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacac 1815305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 343
Target Start/End: Complemental strand, 15323287 - 15323171
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||| ||| | |||||||||||||||| |||||||| |||||||||| |||| | |      || |||||| || |||||||  ||||| ||| |||    
T  15323287 ctatgaaacactgacactcctcggattaggtgtgtttcggtgtcggacacgtgtcatat------ccaacacgatacagacacttacaattacactaaat 15323194  T
Q  322 tatgtga-tttttcaaattatta 343  Q
    ||||||| |||||||||||||||    
T  15323193 tatgtgattttttcaaattatta 15323171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 18190109 - 18190160
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    |||| ||||||||||||||| |||||||||||| | ||||||||||||||||    
T  18190109 gacatcgacacttgtaattacactgaattatgtaattttttcaaattattag 18190160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 18337448 - 18337377
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||| | |||||||||||| |||| |||  |  |||||||||| ||| |||||||||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacac 18337377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 350
Target Start/End: Original strand, 26526751 - 26526816
Alignment:
Q  288 cgacacgacaccgacacttgtaattatactgaattatgtg---atttttcaaattattagctgcgt 350  Q
    |||||| ||||||||||||||||||||| | |||||||||    ||||| ||||||||||||||||    
T  26526751 cgacacaacaccgacacttgtaattatattaaattatgtgttttttttttaaattattagctgcgt 26526816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 40181984 - 40181922
Alignment:
Q  227 aagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccga 290  Q
    ||||||||| ||||||||||||||||||||  || ||| |||||| ||| ||||||||||||||    
T  40181984 aagcacagc-actcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccga 40181922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 48547972 - 48548019
Alignment:
Q  280 tccgacaccgacacgacaccgacacttgtaattatactgaattatgtg 327  Q
    |||||||||||||||||||| | ||||||||||| | |||||||||||    
T  48547972 tccgacaccgacacgacaccaatacttgtaattacattgaattatgtg 48548019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 324
Target Start/End: Complemental strand, 52284809 - 52284731
Alignment:
Q  245 gattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattat 324  Q
    |||||| ||||| | | |||||||||  ||||||||| |||||||| |   |||||||||||||||||||||||||||||    
T  52284809 gattagacgtgtcttggtgtcggacatgtgtcgtgtctgacaccgatatt-caccgacacttgtaattatactgaattat 52284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 2218302 - 2218264
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtg 327  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  2218302 gacacgacaccgacacttgtaattacactaaattatgtg 2218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 10572579 - 10572641
Alignment:
Q  283 gacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattag 344  Q
    |||||| |||| |||||||||| | |||||| || ||||||||||||||| ||||||||||||    
T  10572579 gacaccaacacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattag 10572641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 303
Target Start/End: Complemental strand, 17408822 - 17408740
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgaca 303  Q
    |||||||||||||| ||||| || ||||||| || | | | |||||||||| ||||||||| || ||| |||| |||||||||    
T  17408822 actatgaagcacagacactcttcagattaggtgtatcttggtgtcggacacgtgtcgtgtctgataccaacacaacaccgaca 17408740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 21365992 - 21366038
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcgga 268  Q
    ||||||||||| | ||||||||||||||||||||| ||| |||||||    
T  21365992 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 21366038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 25272544 - 25272502
Alignment:
Q  290 acacgacaccgacacttgtaattatactgaattatgtgatttt 332  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||    
T  25272544 acacgacaccgacacttataattacactaaattatgtgatttt 25272502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 32434718 - 32434768
Alignment:
Q  295 acaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    |||| |||||||||||||| | |||||||||||| ||||||||||||||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattag 32434768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 347
Target Start/End: Original strand, 48450592 - 48450642
Alignment:
Q  298 ccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    |||||||||||||||| ||| |||||||| | |||||||||||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctg 48450642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 1864882 - 1864931
Alignment:
Q  295 acaccgacacttgtaattatactgaattatgtgatttt-tcaaattatta 343  Q
    |||||||||| | |||||| |||||||||||||||||| |||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 5898206 - 5898275
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgac 291  Q
    |||| |||||| | ||||||||||||||| |||||  || ||| |||||| ||||||||| |||||||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgac 5898275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 6427413 - 6427356
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||||||| |||| | |||||| | |||||||||||||||| |||||||||||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagc 6427356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 347
Target Start/End: Original strand, 13011223 - 13011271
Alignment:
Q  301 acacttgtaattatactgaattatgtga--tttttcaaattattagctg 347  Q
    ||||||||||||| ||| ||||||||||  |||||||||||||||||||    
T  13011223 acacttgtaattacacttaattatgtgatttttttcaaattattagctg 13011271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 17754386 - 17754317
Alignment:
Q  277 gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagc 345  Q
    |||||| |||||||||| |||| ||||| | || ||| |||||||||||| | |||||||||||||||||    
T  17754386 gtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagc 17754317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 20157346 - 20157403
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||||||| | | |||| |||||||||||||||||| ||| |||||||||    
T  20157346 gacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagc 20157403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 24334705 - 24334761
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatg--tgatttttcaaattattagctg 347  Q
    ||||||||||||||||||||| |||||||||||  |  |||||||||| ||||||||    
T  24334705 cgacaccgacacttgtaattacactgaattatgcattttttttcaaatgattagctg 24334761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 333
Target Start/End: Complemental strand, 28663668 - 28663627
Alignment:
Q  292 acgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||||||||||||| |  ||||||||||||||||    
T  28663668 acgacaccgacacttgtaattacatagaattatgtgattttt 28663627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 29144320 - 29144369
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacac 271  Q
    ||||||||||| | ||||| |||||||||||||||| || ||||||||||    
T  29144320 ctatgaagcacggacactcttcggattaggcgtgttccggtgtcggacac 29144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 31015156 - 31015091
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacac 287  Q
    ||||||||||| |   ||||| |||||||||||||  ||||||| ||||| |||||||||||||||    
T  31015156 ctatgaagcactgatcctccttggattaggcgtgtcccgatgtcagacacgtgtcgtgtccgacac 31015091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 40181930 - 40181877
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||||| || | |||||| |||||||||||||||||| |||||||||||||    
T  40181930 cgacaccgatacatataattacactgaattatgtgattttctcaaattattagc 40181877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 46940748 - 46940797
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacac 271  Q
    |||||||||||   |||||||||||||||||||||| || ||||||||||    
T  46940748 ctatgaagcacgaacactcctcggattaggcgtgttccggtgtcggacac 46940797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 1262928 - 1262888
Alignment:
Q  308 taattatactgaattatgtgatttt-tcaaattattagctg 347  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctg 1262888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 293
Target Start/End: Original strand, 18190047 - 18190119
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||| ||  |||||||||||||||| ||||  || |||||||||| ||| ||||| |||| ||||||    
T  18190047 actatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacac 18190119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 333
Target Start/End: Complemental strand, 21621014 - 21620974
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||| ||||||| || |||||||||||||||||||    
T  21621014 cgacaccgacgcttgtaaatacactgaattatgtgattttt 21620974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 35702540 - 35702576
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgt 256  Q
    ||||||||||||| | |||||||||||||||||||||    
T  35702540 aactatgaagcacggacactcctcggattaggcgtgt 35702576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 36906075 - 36906003
Alignment:
Q  274 gtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||||| ||||| || || |||| | ||||||  ||||||||||||||||| ||| |||||||||    
T  36906075 gtcgtgtccgacactgacacaacgccaacacatataattactctgaattatgtgattttctcagattattagc 36906003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 38503386 - 38503326
Alignment:
Q  286 accgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||| ||||||||||| | |||||| |||||| ||| ||||||| |||||||||||||    
T  38503386 accgacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagc 38503326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 7e-37; HSPs: 76)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 16766827 - 16766701
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | || || |||||||||||||||  || |||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 16766728  T
Q  322 tatgtgat-ttttcaaattattagctg 347  Q
    |||||||| ||||||||||||||||||    
T  16766727 tatgtgattttttcaaattattagctg 16766701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 222 - 347
Target Start/End: Original strand, 9107299 - 9107425
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||||||||||| ||||  || ||||||||||  || ||||||||||||||||||||||||||||||||||||| |||||||    
T  9107299 ctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 9107398  T
Q  322 tatgtga-tttttcaaattattagctg 347  Q
    | ||||| |||||||||||||||||||    
T  9107399 tttgtgattttttcaaattattagctg 9107425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 8365448 - 8365571
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| |  ||||||||||||||||||||  |  |||||||||| |||||||||||| |||||||||||||||||||||||||||| || ||||    
T  8365448 ctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaat 8365547  T
Q  322 tatgtgat-ttttcaaattattag 344  Q
    |||||||| |||||||||||||||    
T  8365548 tatgtgatattttcaaattattag 8365571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 222 - 343
Target Start/End: Original strand, 5970037 - 5970159
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    |||||||||| || ||||||||||||| |||||||  |||||||||| |  ||||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  5970037 ctatgaagcatagtcactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaat 5970136  T
Q  322 tatgtga-tttttcaaattatta 343  Q
    ||||||| |||||||||||||||    
T  5970137 tatgtgattttttcaaattatta 5970159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 222 - 343
Target Start/End: Complemental strand, 8714110 - 8713987
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    |||||||||| || ||||||||||||| |||||||  |||||||||| |  ||||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  8714110 ctatgaagcaaagacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaat 8714011  T
Q  322 tatgtgat--ttttcaaattatta 343  Q
    ||||||||  ||||||||||||||    
T  8714010 tatgtgatttttttcaaattatta 8713987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 244 - 333
Target Start/End: Complemental strand, 9522999 - 9522910
Alignment:
Q  244 ggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    ||||||||||||| ||| |||||||||| |||||  |||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  9522999 ggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgattttt 9522910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 31385048 - 31384927
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    |||||||||| | ||||||| |||||||||||||  || ||| |||||| |||||||||| ||||  ||||||||| |||||||||||||| ||||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacact-acacgacactgacacttgtaattacactgaatt 31384950  T
Q  323 atgtgat-ttttcaaattattag 344  Q
    ||||||| |||||||||||||||    
T  31384949 atgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 346
Target Start/End: Complemental strand, 28152218 - 28152104
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaa 320  Q
    ||||||||||||   ||||||||||||||||| |||  || |||||||||| |||||||||||||||||||||           ||||||||| ||||||    
T  28152218 actatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacac-----------ttgtaattacactgaa 28152130  T
Q  321 ttatgtgatttttcaaattattagct 346  Q
    ||||||||||||||||||||||||||    
T  28152129 ttatgtgatttttcaaattattagct 28152104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 342
Target Start/End: Complemental strand, 9629515 - 9629392
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgaca-cgacaccgacacttgtaattatactg 318  Q
    ||||||||||||  | ||||||||||||||| ||||| ||  |||||||||| ||| |||||||||| ||||| |||||||||||| | |||||| | ||    
T  9629515 aactatgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgaca-cgacaccgacaccgacacatataattacattg 9629417  T
Q  319 aattatgtgatttt-tcaaattatt 342  Q
    |||||||||||||| ||||||||||    
T  9629416 aattatgtgattttctcaaattatt 9629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 222 - 340
Target Start/End: Original strand, 10339054 - 10339174
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaatt-atactgaa 320  Q
    ||||||||||| | |||||||| ||||||||||||  |  |||||||||  |||||||||||||||||||||| ||| ||||| | ||||| | ||||||    
T  10339054 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaa 10339153  T
Q  321 ttatgtgatttt-tcaaatta 340  Q
    |||||||||||| ||||||||    
T  10339154 ttatgtgattttctcaaatta 10339174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 3209518 - 3209385
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccg------acacttgtaattata 315  Q
    ||||||||||||  |||||||||||||||||||||   | |||||||| | |||||||| |||||| ||||||||||||      ||||||||||| | |    
T  3209518 ctatgaagcacaaacactcctcggattaggcgtgtccgggtgtcggacgcgtgtcgtgttcgacactgacacgacaccgacaccgacacttgtaataaca 3209419  T
Q  316 ctgaattatgtga--tttttcaaattattagctg 347  Q
    || ||||||||||  |||||||||||||||||||    
T  3209418 ctaaattatgtgatttttttcaaattattagctg 3209385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 221 - 331
Target Start/End: Complemental strand, 7248489 - 7248379
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaa 320  Q
    |||||||||||| | ||||||||||||| | |||||  || |||||||||| ||| |||||| ||||||||||||| || |||| | ||||||  |||||    
T  7248489 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaa 7248390  T
Q  321 ttatgtgattt 331  Q
    |||||||||||    
T  7248389 ttatgtgattt 7248379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 347
Target Start/End: Complemental strand, 12696446 - 12696328
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatta 323  Q
    ||||||||||| ||||||| |||| ||| ||||  || |||| ||||| |||||||||||||||      ||||| |||||||||||||| |||||||||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacac------gacactgacacttgtaattacactgaatta 12696353  T
Q  324 tgtga-tttttcaaattattagctg 347  Q
    ||| | |||||||||||||||||||    
T  12696352 tgtaattttttcaaattattagctg 12696328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 3398728 - 3398623
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttttca 335  Q
    |||||||| |||||| |||||| || |||||||||  |||||||||| ||||      |||||||| |||| |||||| |||||||||| ||||||||||    
T  3398728 cactcctctgattagacgtgttccggtgtcggacatgtgtcgtgtccaacac------gacaccgatacttataattacactgaattatatgatttttca 3398635  T
Q  336 aattattagctg 347  Q
    ||||||||||||    
T  3398634 aattattagctg 3398623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 10770670 - 10770726
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  10770670 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 10770726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 21395292 - 21395360
Alignment:
Q  277 gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttttcaaattattagc 345  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||||||||  ||| |||||||||||||    
T  21395292 gtgtccgacactgacacgacaccgacacttgtaattacactaaattatgtattttctcaaattattagc 21395360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 24645602 - 24645484
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactga 319  Q
    ||||||||||||||| ||||| ||||||||| ||||| | | |||||||||| ||||||||| |||||||           |||||||||| ||||||||    
T  24645602 aactatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccg-----------acacttgtaactatactga 24645514  T
Q  320 attatgtga--tttttcaaattattagctg 347  Q
    |||||||||  |||||||||||||||||||    
T  24645513 attatgtgatttttttcaaattattagctg 24645484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 344
Target Start/End: Complemental strand, 17302665 - 17302563
Alignment:
Q  244 ggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgat--ttttcaaattat 341  Q
    |||||||| ||||| ||||||||||||| ||| |||||  | || |||||||||  |||||||||||||| | |||||||||||||  ||||||||||||    
T  17302665 ggattaggtgtgttccgatgtcggacacgtgttgtgtctaatactgacacgacaatgacacttgtaattacattgaattatgtgatttttttcaaattat 17302566  T
Q  342 tag 344  Q
    |||    
T  17302565 tag 17302563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 223 - 347
Target Start/End: Original strand, 17841530 - 17841644
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    |||||||||| | ||||||||||||||||||||| ||  |||||||||| |||||||||           |||||||| |||||||||||| ||| ||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtc-----------cgacaccgtcacttgtaattacactaaatt 17841618  T
Q  323 atgtga-tttttcaaattattagctg 347  Q
    |||||| |||||||||||||||||||    
T  17841619 atgtgattttttcaaattattagctg 17841644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 332
Target Start/End: Complemental strand, 18367966 - 18367856
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||| |||| ||||||||  |  |||| ||||  ||||||||| |||||||||||||||||||||| | |||||| |||| ||    
T  18367966 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgcat 18367867  T
Q  322 tatgtgatttt 332  Q
    | |||||||||    
T  18367866 tttgtgatttt 18367856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 345
Target Start/End: Original strand, 34073276 - 34073400
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactga 319  Q
    ||||||||||||| | ||||||||| |||||  ||||  || |||||| ||| ||||||||  |||||||||||||||||||| | | |||||| |||||    
T  34073276 aactatgaagcacggacactcctcgaattagaggtgtcccggtgtcgg-cacatgtcgtgta-gacaccgacacgacaccgacccatataattacactga 34073373  T
Q  320 attatgtgatttt-tcaaattattagc 345  Q
    |||||| |||||| |||||||||||||    
T  34073374 attatgagattttctcaaattattagc 34073400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 4878002 - 4877946
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga--tttttcaaattattagctg 347  Q
    ||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  4878002 cgacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctg 4877946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 9911524 - 9911584
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtgatt--tttcaaattattagctg 347  Q
    ||||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||||||    
T  9911524 gacacgacaccgacacttgtaattacactgaattatgtgatttcttttaaattattagctg 9911584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 267 - 332
Target Start/End: Original strand, 16488564 - 16488629
Alignment:
Q  267 gacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt 332  Q
    ||||| |||||||||||||||||||||||||||||||| | |||||| |||| ||| |||||||||    
T  16488564 gacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgatttt 16488629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 34595253 - 34595141
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||||||||||| ||||  || |||| ||||| |||||||||||||||||||||           ||||||||| |||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacac-----------ttgtaattacactgaat 34595165  T
Q  322 tatgtgat-ttttcaaattattag 344  Q
    |||||||| |||||||||||||||    
T  34595164 tatgtgattttttcaaattattag 34595141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 345
Target Start/End: Complemental strand, 10294237 - 10294113
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||||| |||||||| ||||||  ||||     | |||||||| |||||||||||||||| ||||||||||||||| | |||||| | ||||     
T  10294237 ctatgaagcacagacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacaccaacacgacaccgacacatataattacattgaaa 10294138  T
Q  322 tatgtgatt-tttcaaattattagc 345  Q
    |||| |||| | |||||||||||||    
T  10294137 tatgcgattatctcaaattattagc 10294113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 359
Target Start/End: Complemental strand, 28715354 - 28715289
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctgcgtgtcagtgtc 359  Q
    ||||||||||||||||||||| |||||||||||| | |||||||||||||||||  ||||||||||||    
T  28715354 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagc--cgtgtcagtgtc 28715289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 7977830 - 7977885
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    ||||||||||||||||||||| |||||||||||| | |||||||||||||||||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctg 7977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 8776908 - 8777025
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||||||||||| |||| ||| |||||||||| |||||||| ||   |     ||||||| ||||||||||||| |||||||    
T  8776908 ctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgt-cgtgtc-----cgacaccaacacttgtaattacactgaat 8777001  T
Q  322 tatgtga-tttttcaaattattag 344  Q
    | ||||| ||||||||||||||||    
T  8777002 tttgtgattttttcaaattattag 8777025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 344
Target Start/End: Original strand, 9195727 - 9195806
Alignment:
Q  266 ggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattag 344  Q
    |||||| ||||||||| |||||| ||||||||||||||| | |||||| ||| |||||||| ||||| ||||||||||||    
T  9195727 ggacacatgtcgtgtcagacacctacacgacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 33001229 - 33001300
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||||  ||||| | ||||||||||| ||||| |||| ||||| |||||||||||||||||||||    
T  33001229 ctatgaagcacaaacactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacac 33001300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 26562765 - 26562695
Alignment:
Q  276 cgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||| |||||||||||||||| |||||| | |||||| |||||||||||||||||| ||||||| |||||    
T  26562765 cgtgttcgacaccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagc 26562695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 8931592 - 8931657
Alignment:
Q  283 gacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagctg 347  Q
    ||||||||||||||| |||||| | ||||||||||||||||||| ||||| ||||||| |||||||    
T  8931592 gacaccgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagctg 8931657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 9025490 - 9025547
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||||||| | |||||| |||||||||||||||||| |||||||||||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagc 9025547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 346
Target Start/End: Complemental strand, 17435289 - 17435204
Alignment:
Q  262 tgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagct 346  Q
    ||||| |||| |||||||||||||| |||||  ||||  ||||||||||||| |||||||||||| | ||||| ||||||||||||    
T  17435289 tgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaattatgtaattttttaaaattattagct 17435204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 7801156 - 7801208
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 7801208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 276 - 343
Target Start/End: Complemental strand, 9617510 - 9617442
Alignment:
Q  276 cgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattatta 343  Q
    ||||||||||||||  ||||||||||||| | |||||| | |||||||||||||||| |||||||||||    
T  9617510 cgtgtccgacaccgcgacgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 6898221 - 6898292
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||||   ||||| ||||||||||||||||||| ||| ||||||   |||||||||||||||||||    
T  6898221 ctatgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacac 6898292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 11424684 - 11424751
Alignment:
Q  266 ggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||| |||||||| |||||||||||| ||||| |||| | |||||||| |||||||| ||||||||    
T  11424684 ggacacatgtcgtgttcgacaccgacacaacaccaacacatataattatattgaattatatgattttt 11424751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 7723241 - 7723303
Alignment:
Q  284 acaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||||||||| || | ||||||| ||||||||| ||||||| |||||||||||||    
T  7723241 acaccgacacgacaccgatacatataattatgctgaattatatgattttctcaaattattagc 7723303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 16833365 - 16833315
Alignment:
Q  295 acaccgacacttgtaattatactgaattatgtgat-ttttcaaattattag 344  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattag 16833315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 31959213 - 31959163
Alignment:
Q  298 ccgacacttgtaattatactgaattatgtgat-ttttcaaattattagctg 347  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattattagctg 31959163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 853821 - 853870
Alignment:
Q  244 ggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||||| || ||||||||||| |||||| ||||||||||||||    
T  853821 ggattaggcgtgtctctatgtcggacacatgtcgtatccgacaccgacac 853870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 347
Target Start/End: Original strand, 1191706 - 1191755
Alignment:
Q  299 cgacacttgtaattatactgaattatgtg-atttttcaaattattagctg 347  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  1191706 cgacacttgtaattacactgaattttgtgaatttttcaaattattagctg 1191755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 7265593 - 7265646
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||| | |||||| |||||||||||||||||| |||||||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagc 7265646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 17327590 - 17327655
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacac 287  Q
    ||||||||||| | |||||||||||||||||||||  |  |||| ||||| |||||||||||||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 32511604 - 32511677
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||||| | |||||||| ||||||||||| | ||||||| ||||  |||||| ||||||||| ||||    
T  32511604 aactatgaagcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacac 32511677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 32978899 - 32978955
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtg--atttttcaaattattagctg 347  Q
    ||||||||||||||||||||| ||| |||||||||   |||||||||||||||||||    
T  32978899 cgacaccgacacttgtaattacacttaattatgtgttttttttcaaattattagctg 32978955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 785444 - 785488
Alignment:
Q  282 cgacaccgacacgacaccgacacttgtaattatactgaattatgt 326  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||    
T  785444 cgacaccgacacgacaccgacacttgtgattacattgaattatgt 785488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 853859 - 853911
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    ||||||||||||||||||||  ||| |||||||||| ||||||||||||||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattag 853911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 6898281 - 6898333
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgattt-ttcaaattattag 344  Q
    ||||||||||||||||||||| ||| |||||||| |||| |||||||||||||    
T  6898281 cgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattag 6898333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 32978842 - 32978910
Alignment:
Q  225 tgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||| | ||||||| ||||||| |||||  || |||||||||  |||||||||||||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 32978910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 343
Target Start/End: Original strand, 403864 - 403915
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattatta 343  Q
    ||||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  403864 cgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 343
Target Start/End: Original strand, 426514 - 426565
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattatta 343  Q
    ||||||||||||||||||||| | | |||||||||| |||||||||||||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattatta 426565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 343
Target Start/End: Original strand, 4118317 - 4118384
Alignment:
Q  277 gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattatta 343  Q
    ||||||||||| ||||| | ||| ||||||||||||| | | |||||||||| |||||||||||||||    
T  4118317 gtgtccgacactgacacaaaaccaacacttgtaattacatttaattatgtgattttttcaaattatta 4118384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 7930368 - 7930313
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattatta 343  Q
    ||||||||||||||||||| ||||  ||| ||||||||||| ||||||||||||||    
T  7930368 gacacgacaccgacacttgaaatttcactaaattatgtgattttttcaaattatta 7930313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 28715414 - 28715343
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||||   |||| |||| |||||||||||  || ||||| |||| |||||||||||||||||||||    
T  28715414 ctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacac 28715343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 1681811 - 1681765
Alignment:
Q  299 cgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattag 1681765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 345
Target Start/End: Original strand, 5000569 - 5000679
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tc 334  Q
    ||||| ||||||||| |||||   | ||||||| |  ||||||||| |||||||||| ||||| ||||  |  ||||||||||||| |||||||||| ||    
T  5000569 cactcttcggattagacgtgtcctggtgtcggatatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctc 5000668  T
Q  335 aaattattagc 345  Q
     ||||||||||    
T  5000669 gaattattagc 5000679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 7938174 - 7938120
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    ||||||||||||| |||||| ||| |||||| ||| |||||||||||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctg 7938120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 7938219 - 7938169
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacc 272  Q
    ||||||||||| | |||||||||||| |||||||| ||| |||||||||||    
T  7938219 ctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacacc 7938169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 7086858 - 7086801
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||| |||||||||| | |||||| ||| |||||||||||||| |||||||||||||    
T  7086858 gacactacaccgacacatataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 7723199 - 7723236
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttc 259  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  7723199 ctatgaagcacggacactcctcggattaggcgtgtttc 7723236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 9027241 - 9027184
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtgatt-tttcaaattattagc 345  Q
    |||||||||||||||| | |||||| || ||||||||||||| | |||||||||||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagc 9027184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 19040411 - 19040358
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||| ||||| | |||||| |||||||||||||||||| |||||||||||||    
T  19040411 cgacacagacacatataattacactgaattatgtgattttctcaaattattagc 19040358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 32511666 - 32511719
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||| |||||| |||||| |||||||||||||||||| | |||||||||||    
T  32511666 cgacaccaacacttataattacactgaattatgtgattttcttaaattattagc 32511719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 333
Target Start/End: Complemental strand, 1700411 - 1700371
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||||| |||||| |||||| ||||||||||||    
T  1700411 cgacaccgacacttataattacactgaaatatgtgattttt 1700371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 350
Target Start/End: Complemental strand, 2224291 - 2224227
Alignment:
Q  287 ccgacacgacaccgacacttgtaattatactgaattatgtgatttttc-aaattattagctgcgt 350  Q
    ||||||||||  ||| | ||||||||| |||||||||| ||||||||  ||||||||||||||||    
T  2224291 ccgacacgacgtcgatatttgtaattacactgaattatatgatttttttaaattattagctgcgt 2224227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 333
Target Start/End: Complemental strand, 7027301 - 7027261
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||| | |||||| |||||||||||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgattttt 7027261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 10827507 - 10827555
Alignment:
Q  245 gattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||| || ||||||||||||| ||| ||||||||||| |||||    
T  10827507 gattaggcgtattccgatgtcggacacgtgttgtgtccgacacagacac 10827555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 343
Target Start/End: Original strand, 17341671 - 17341715
Alignment:
Q  300 gacacttgtaattatactgaattatgtgatttt-tcaaattatta 343  Q
    ||||||| |||||| |||||||||||||||||| |||||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattatta 17341715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 19369881 - 19369837
Alignment:
Q  288 cgacacgacaccgacacttgtaattatactgaattatgtgatttt 332  Q
    ||||||||||||||||||||| |||| | |||||||||| |||||    
T  19369881 cgacacgacaccgacacttgtgattacattgaattatgtcatttt 19369837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 350
Target Start/End: Original strand, 20576623 - 20576691
Alignment:
Q  283 gacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagctgcgt 350  Q
    |||| |||||||||||| |||||| |||||| |||||||||||  ||||| || |||||||||| ||||    
T  20576623 gacatcgacacgacaccaacacttataattacactgaattatgcaattttctcgaattattagccgcgt 20576691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 313
Target Start/End: Complemental strand, 22746036 - 22745996
Alignment:
Q  273 tgtcgtgtccgacaccgacacgacaccgacacttgtaatta 313  Q
    |||||||| ||||| ||||||||||||||||||||| ||||    
T  22746036 tgtcgtgttcgacagcgacacgacaccgacacttgtgatta 22745996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 333
Target Start/End: Original strand, 26402680 - 26402720
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||||||| |||| |||||||||||| ||||||    
T  26402680 cgacaccgacacttgtgattacactgaattatgtcattttt 26402720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 31429004 - 31429059
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtga--tttttcaaattattagctg 347  Q
    |||||| ||| ||||||||| ||||||||||||||  ||||| |||||||||||||    
T  31429004 gacacctacatttgtaattacactgaattatgtgattttttttaaattattagctg 31429059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 222 - 333
Target Start/End: Original strand, 3778 - 3889
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||  | ||||||||||||||||||||| |||||||||||||  |||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  3778 ctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaat 3877  T
Q  322 tatgtgattttt 333  Q
    ||||||||||||    
T  3878 tatgtgattttt 3889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 4987234 - 4987346
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttc 334  Q
    |||||||||||||||||||||  || |||||||||| |||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||| ||||||    
T  4987234 cactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttc 4987333  T
Q  335 aaattattagctg 347  Q
    |||||||||||||    
T  4987334 aaattattagctg 4987346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 219 - 345
Target Start/End: Original strand, 34185049 - 34185176
Alignment:
Q  219 caactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactg 318  Q
    |||||||||||||| | |||||||||||||||||||||  || |||||||||| |||| |||||||||  ||||||||||||||||||||||||| ||||    
T  34185049 caactatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactg 34185148  T
Q  319 aattatgtga-tttttcaaattattagc 345  Q
    |||| ||||| ||||| |||||||||||    
T  34185149 aattgtgtgattttttgaaattattagc 34185176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 41961579 - 41961702
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||| ||||||||||||||||  |  |||||||||| |||||||||||| |||||||||||||||||||||||||||| || ||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaat 41961678  T
Q  322 tatgtgat-ttttcaaattattag 344  Q
     ||||||| |||||||||||||||    
T  41961679 aatgtgatattttcaaattattag 41961702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 222 - 333
Target Start/End: Complemental strand, 14209243 - 14209132
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||| || |||||||| || |  |||||||| |||| |||||||||||||||||||||||||| |||||||||||||| |||||||    
T  14209243 ctatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 14209144  T
Q  322 tatgtgattttt 333  Q
    ||||||||||||    
T  14209143 tatgtgattttt 14209132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 28812645 - 28812522
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    |||||| |||||| |||||||||||||||||||||   | |||||||||  | ||||||| |||||| ||||||||||||||||||||| || |||||||    
T  28812645 ctatgaggcacagacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaat 28812546  T
Q  322 tatgtgattt-ttcaaattattag 344  Q
    |||||||||| |||||||||||||    
T  28812545 tatgtgatttcttcaaattattag 28812522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 347
Target Start/End: Complemental strand, 14829816 - 14829694
Alignment:
Q  226 gaagcacagccactcctcggattaggcgtgtttcgatgtcggac-acctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattat 324  Q
    ||||||| | || ||||| ||||||||||||  || ||||| || || | |||||||| ||||||||||||||||||||||||||||||   ||||||||    
T  14829816 gaagcacggacattcctcagattaggcgtgtcccggtgtcgaaccacatctcgtgtccaacaccgacacgacaccgacacttgtaattaccatgaattat 14829717  T
Q  325 gtgatttttcaaattattagctg 347  Q
    |||||||||||||||||||||||    
T  14829716 gtgatttttcaaattattagctg 14829694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 246 - 347
Target Start/End: Complemental strand, 14832205 - 14832103
Alignment:
Q  246 attaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattag 344  Q
    |||||||||||  || |||||||||| |||||||||||| ||||||||||||| |||||||||||||| | ||| ||||||||| |||||||||||||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattag 14832106  T
Q  345 ctg 347  Q
    |||    
T  14832105 ctg 14832103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 222 - 343
Target Start/End: Original strand, 15796223 - 15796345
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    |||||||||||   ||||| | |||||||||||||| || ||| |||||| ||| |||||||||||| |||||||||||||| ||||||||| |||||||    
T  15796223 ctatgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaat 15796322  T
Q  322 tatgtga-tttttcaaattatta 343  Q
    ||| ||| |||||||||||||||    
T  15796323 tatatgattttttcaaattatta 15796345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 221 - 345
Target Start/End: Original strand, 8039763 - 8039888
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaa 320  Q
    ||||||||||||||  |||| |||||||| ||||||  || |||||||||  | || ||||||||||||||||||||||||||| | |||||| ||||||    
T  8039763 actatgaagcacagatactcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaa 8039862  T
Q  321 ttatgtgatttt-tcaaattattagc 345  Q
    |||| | ||||| |||||||||||||    
T  8039863 ttatataattttctcaaattattagc 8039888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 345
Target Start/End: Original strand, 49651716 - 49651839
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||| ||||||||||| ||||  || ||||||| |  |||||||||||   ||||||||||||||||||||||||||| | |||||    
T  49651716 ctatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccggt-ccgacacgacaccgacacttgtaattacagtgaat 49651814  T
Q  322 tatgtga-tttttcaaattattagc 345  Q
    ||||||| |||||||||||||||||    
T  49651815 tatgtgattttttcaaattattagc 49651839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 27505370 - 27505250
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||||||||||||| |||  || |||||||||| ||||||||| |||||      |||||||||||||||||||| ||| |||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacac------gacaccgacacttgtaattacacttaat 27505277  T
Q  322 tatgtgattttt-caaattattagctg 347  Q
    ||||||||||||  |||||||||||||    
T  27505276 tatgtgatttttaaaaattattagctg 27505250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 55401194 - 55401123
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||| | ||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 55401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 14217021 - 14216899
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    |||||||||| | |||| ||||||||||| ||||  |  ||||| |||| |||||||||||||||  ||||||||| |||||||||||||| ||||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14216922  T
Q  323 atgtgat-ttttcaaattattag 344  Q
    || |||| |||| ||||||||||    
T  14216921 atatgatattttaaaattattag 14216899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 14223150 - 14223028
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    |||||||||| | |||| ||||||||||| ||||  |  ||||| |||| |||||||||||||||  ||||||||| |||||||||||||| ||||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14223051  T
Q  323 atgtgat-ttttcaaattattag 344  Q
    || |||| |||| ||||||||||    
T  14223050 atatgatattttaaaattattag 14223028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 344
Target Start/End: Original strand, 750590 - 750670
Alignment:
Q  265 cggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattag 344  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||  |  |||||||||||| |||||||||||||||    
T  750590 cggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattag 750670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 277 - 359
Target Start/End: Complemental strand, 1509614 - 1509533
Alignment:
Q  277 gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattagctgcgtgtcagtgtc 359  Q
    ||||| |||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||  |||||||||||    
T  1509614 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagct--gtgtcagtgtc 1509533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 34910396 - 34910324
Alignment:
Q  273 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattag 344  Q
    |||| ||||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||||||||||    
T  34910396 tgtcatgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaattattag 34910324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 11252095 - 11252024
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||||| |||||||||||||||||||||| ||||| ||||||| ||| ||||| |||||||||||    
T  11252095 ctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacac 11252024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 219 - 344
Target Start/End: Original strand, 17005545 - 17005671
Alignment:
Q  219 caactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactg 318  Q
    |||||||||||||||  |||||||||||||||  ||||   | |||| ||||| |||  |||| |||||| |||| |||||||||||| |||||| ||||    
T  17005545 caactatgaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacaccaacacaacaccgacacttataattacactg 17005644  T
Q  319 aattatgtgatttt-tcaaattattag 344  Q
    |||||| ||||||| ||||||||||||    
T  17005645 aattatatgattttatcaaattattag 17005671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 21256984 - 21257041
Alignment:
Q  291 cacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21256984 cacgataccgacacttgtaattatactgaattatgtgattttttcaaattattagctg 21257041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 333
Target Start/End: Complemental strand, 55213070 - 55212982
Alignment:
Q  244 ggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||| |||||| ||| |||||||||| ||| ||| ||||||||||||| ||||||||||||||||||  ||| |||||||||||||||    
T  55213070 ggattatgcgtgtctcggtgtcggacacgtgttgtgcccgacaccgacac-acaccgacacttgtaattgcactaaattatgtgattttt 55212982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 345
Target Start/End: Complemental strand, 11666070 - 11665950
Alignment:
Q  226 gaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatg 325  Q
    ||||||| | ||||||| | |||||||||||| |||| || ||||| |||||||||  ||| | ||||||||||||||| | |||||| ||| |||| ||    
T  11666070 gaagcacggacactccttgaattaggcgtgttccgatatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtg 11665971  T
Q  326 tgatttt-tcaaattattagc 345  Q
    ||||||| |||||||||||||    
T  11665970 tgattttatcaaattattagc 11665950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 28918062 - 28918006
Alignment:
Q  291 cacgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattagct 346  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  28918062 cacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagct 28918006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 299 - 347
Target Start/End: Original strand, 35994744 - 35994792
Alignment:
Q  299 cgacacttgtaattatactgaattatgtgatttttcaaattattagctg 347  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35994744 cgacacttgtaattacactgaattatgtgatttttcaaattattagctg 35994792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 8593196 - 8593140
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgattttt--caaattattagctg 347  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  8593196 cgacaccgacacttgtaattatactgaattatgtgattttttccaaattagtagctg 8593140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 26508166 - 26508114
Alignment:
Q  296 caccgacacttgtaattatactgaattatgtgat-ttttcaaattattagctg 347  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctg 26508114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 359
Target Start/End: Original strand, 51206353 - 51206418
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctgcgtgtcagtgtc 359  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||  |||||||||||    
T  51206353 cgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagct--gtgtcagtgtc 51206418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 333
Target Start/End: Complemental strand, 16789141 - 16789031
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||||  |||||| ||||  || ||| |||||  |||| |||||||||| ||||||||||| |||||| |||||| |||||||    
T  16789141 ctatgaagcacggacactcctcaaattaggtgtgtcccg-tgttggacatgtgtcatgtccgacactgacacgacaccaacacttataattacactgaat 16789043  T
Q  322 tatgtgattttt 333  Q
    ||| ||||||||    
T  16789042 tatatgattttt 16789031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 25948881 - 25948940
Alignment:
Q  287 ccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagc 345  Q
    ||||||||||||| |||||| |||||| |||||||||||||| |||||||||||||||||    
T  25948881 ccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattagc 25948940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 40993275 - 40993346
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||  | |||||||||||||||||||||  || |||||||||  |||||||||||||||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 40993346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 25775568 - 25775516
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat--ttttcaaattatta 343  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  25775568 cgacaccgacacttgtaattacactgaattatgtgattattttcaaattatta 25775516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 10955011 - 10954959
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattag 344  Q
    |||||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  10955011 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattag 10954959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 10955056 - 10955000
Alignment:
Q  237 actcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||||||||||||  |  |||||||||| |||||||||||||||||||||    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacac 10955000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 39756299 - 39756255
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    ||||||||||||||||||||||||||| | |||||||||||||||    
T  39756299 gacacgacaccgacacttgtaattatattaaattatgtgattttt 39756255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 333
Target Start/End: Complemental strand, 3865732 - 3865693
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  3865732 gacaccgacacttgtaattatactgaattatgtgagtttt 3865693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 7171620 - 7171549
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||| |  ||||||| |||||||||||||  || |||||||||| |||||||||||||||| ||||    
T  7171620 ctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacac 7171549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 343
Target Start/End: Original strand, 16192730 - 16192801
Alignment:
Q  273 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattatta 343  Q
    ||||||||| ||||||||||||||| | |||| | |||||| |||||||||||| ||||| |||||||||||    
T  16192730 tgtcgtgtctgacaccgacacgacatcaacacatataattacactgaattatgttattttctcaaattatta 16192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 20503584 - 20503513
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||| | |||||||||||||||||||||  || |||| ||||  |||||||||| ||||||||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacac 20503513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 347
Target Start/End: Complemental strand, 21479192 - 21479122
Alignment:
Q  273 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    |||||||||||||||||     ||||||||||| ||||||| |||||||| ||||| |||||||||||||||||||    
T  21479192 tgtcgtgtccgacaccg-----acaccgacactagtaattacactgaattgtgtgattttttcaaattattagctg 21479122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 4990950 - 4991020
Alignment:
Q  276 cgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||| || ||| ||||||| |||||||||||||||| |||||||||||| ||||| ||||| |||||||    
T  4990950 cgtgtctgataccaacacgacgccgacacttgtaattacactgaattatgtaattttctcaaactattagc 4991020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 350
Target Start/End: Complemental strand, 28678378 - 28678304
Alignment:
Q  277 gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagctgcgt 350  Q
    ||||| |||||| ||||||||||||||| |  ||||||||| |||||||||||||| | ||||||||||| ||||    
T  28678378 gtgtctgacaccaacacgacaccgacacatacaattatactaaattatgtgattttattaaattattagcagcgt 28678304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 7928509 - 7928456
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattagc 345  Q
    |||||||||||| | |||||| ||||||||||||||| ||||||||||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattagc 7928456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 8383316 - 8383263
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||||| |||||| |||||||||| ||||||| |||||||||||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattagc 8383263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 8789489 - 8789561
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggaca--cctgtcgtgtccgacaccgacac 293  Q
    |||||||||| | ||||||||||||||||||||| ||| |||| ||||    |||||||||||||||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacac 8789561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 14747625 - 14747565
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtgat--ttttcaaattattagctg 347  Q
    |||||||||| ||| |||||||||| ||| |||||||||||  ||||||||||||||||||    
T  14747625 gacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctg 14747565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 3164020 - 3164080
Alignment:
Q  288 cgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    |||||||||| | ||||||||  ||| |||||||||||||| |||||||||||||||||||    
T  3164020 cgacacgacatcaacacttgttcttacactgaattatgtgattttttcaaattattagctg 3164080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 333
Target Start/End: Original strand, 8587021 - 8587061
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttt 8587061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 333
Target Start/End: Complemental strand, 17276792 - 17276744
Alignment:
Q  285 caccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||||| |||||||||||||||||  ||||||||| |||||    
T  17276792 caccgacacgacactgacacttgtaattataccaaattatgtgtttttt 17276744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 20503522 - 20503474
Alignment:
Q  295 acaccgacacttgtaattatactgaattatgtga-tttttcaaattatt 342  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  20503522 acaccgacacttgtaattacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 9800106 - 9800047
Alignment:
Q  286 accgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattag 344  Q
    |||||||||||||||||||||  ||||| || ||||||||| ||||| ||||||||||||    
T  9800106 accgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattag 9800047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 13845465 - 13845536
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||| | ||||||| |||| |||||||| ||  |||| ||||| | |||||||||||||||||||    
T  13845465 ctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacac 13845536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 15812803 - 15812871
Alignment:
Q  273 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattatt 342  Q
    |||||||||||||||| ||||||||||| ||  | |||||| ||||| |||||||||||| ||||||||||    
T  15812803 tgtcgtgtccgacaccaacacgacaccggca--tataattacactgagttatgtgattttctcaaattatt 15812871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 345
Target Start/End: Complemental strand, 25065023 - 25064915
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttc 334  Q
    |||||||||||| |  |||||  || |||| ||||| |||||||||||||||| |||||| ||| ||||   |||||| ||| |||||||||| ||||||    
T  25065023 cactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacaccaacacgataccaacac--ataattacactaaattatgtgattttttc 25064926  T
Q  335 aaattattagc 345  Q
    |||| ||||||    
T  25064925 aaatcattagc 25064915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 8842448 - 8842378
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgaca 292  Q
    ||||||||||| | ||||||||||||||||||||| || || ||  |||  ||||||||| ||||||||||    
T  8842448 ctatgaagcacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgaca 8842378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 10268487 - 10268537
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtga-tttttcaaattatta 343  Q
    ||||| |||||||||||||| ||| |||||||||| |||||||||||||||    
T  10268487 gacactgacacttgtaattacactaaattatgtgattttttcaaattatta 10268537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 13806363 - 13806270
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactg 318  Q
    ||||||||| | ||||| |||||||||||||||  ||  ||||| ||  ||| |||||  ||||||||||||||||||||| | |||||||||||    
T  13806363 atgaagcacggacactc-tcggattaggcgtgtcccggggtcggtcatgtgttgtgtctaacaccgacacgacaccgacacatataattatactg 13806270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 333
Target Start/End: Original strand, 15999951 - 16000056
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    ||||| |||| | ||||||| |||||||||||||  || |||||||||| |||||||| ||   |||||     ||||||||||||| ||| ||||||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgtacgtgtccgac-----accgacacttgtagttacactgaatt 16000045  T
Q  323 atgtgattttt 333  Q
    |||| ||||||    
T  16000046 atgttattttt 16000056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 26492205 - 26492259
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagct 346  Q
    ||||||||| ||||||||||| |||||||| | ||| ||||||||||||||||||    
T  26492205 cgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagct 26492259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 345
Target Start/End: Complemental strand, 1550219 - 1550146
Alignment:
Q  273 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt-caaattattagc 345  Q
    |||||||||  |||| |||||||||| ||||| | |||||| |||||||  |||||||||| ||||||||||||    
T  1550219 tgtcgtgtcgaacactgacacgacactgacacctataattacactgaatagtgtgattttttcaaattattagc 1550146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 11610628 - 11610579
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacac 271  Q
    ||||||||||| | |||||||| ||||||||||||  |||||||||||||    
T  11610628 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacac 11610579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 298
Target Start/End: Original strand, 14223788 - 14223864
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtc-gtgtccgacaccgacacgacac 298  Q
    |||| ||||||||  ||||||| ||||||||||| | | ||||||||||| |||| ||||| ||||||||||||||||    
T  14223788 ctataaagcacagaaactcctcagattaggcgtg-tcccatgtcggacacgtgtcggtgtcggacaccgacacgacac 14223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 35223059 - 35222986
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||||| | |||||||||||| | ||||||  |  |||| ||||| |||| ||||||||||||||||    
T  35223059 aactatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacac 35222986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 45451612 - 45451559
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||| | | ||||||||||| ||||||||||| |||||||||||||    
T  45451612 cgacaccgacacatattattatactgaagtatgtgattttctcaaattattagc 45451559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 344
Target Start/End: Original strand, 2620004 - 2620105
Alignment:
Q  242 tcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaatta 340  Q
    |||||||||||||||  ||||| ||||||  |||||||||  |||||| ||||||||| ||||   || ||| ||| |||||||||||||| |||||| |    
T  2620004 tcggattaggcgtgtcccgatgccggacatgtgtcgtgtctaacaccgccacgacaccaacac--atagttacacttaattatgtgattttctcaaatga 2620101  T
Q  341 ttag 344  Q
    ||||    
T  2620102 ttag 2620105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 7614415 - 7614484
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagctgcgtgtcagtgtctgtg 363  Q
    |||||||||||  | ||||||||||||||||||||||||| | ||||||||| ||  ||||| |||||||||    
T  7614415 cgacaccgacatatataattatactgaattatgtgattttcttaaattattaact--gtgtcggtgtctgtg 7614484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 10335286 - 10335338
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    ||||||||||||||||| ||| ||| || ||||||| ||||||||||||||||    
T  10335286 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattag 10335338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 333
Target Start/End: Complemental strand, 14342592 - 14342481
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtc-gtgtccgacaccgacacgacaccgacacttgtaattatactgaa 320  Q
    |||| |||||||| |||| ||||||||| |||||||  | ||||||| |  |||| ||||||||| ||||||||||| ||||| || ||| || | ||||    
T  14342592 ctatcaagcacagacacttctcggattaagcgtgttctggtgtcggataaatgtcagtgtccgacgccgacacgacaacgacaattataa-tacattgaa 14342494  T
Q  321 ttatgtgattttt 333  Q
    |||| ||||||||    
T  14342493 ttatatgattttt 14342481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 241724 - 241598
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||| ||||||||||||||||  || |||||||||| |||||||||||||||| ||||||||||||||||  |||||| ||| |||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaat 241625  T
Q  322 tatgtgattttt-caaattattagctg 347  Q
    |||||||||||| ||||||||||||||    
T  241624 tatgtgatttttccaaattattagctg 241598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 222 - 342
Target Start/End: Complemental strand, 37419873 - 37419752
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||||||||||||||||  || ||||||||||   |||||||||||||||||||||||||| |||||||||||| |||||||    
T  37419873 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaat 37419774  T
Q  322 tatgtga-tttttcaaattatt 342  Q
    | ||||| ||||||||||||||    
T  37419773 tttgtgattttttcaaattatt 37419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 222 - 324
Target Start/End: Complemental strand, 35056998 - 35056896
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||| |||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||| | |||||| |||||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaat 35056899  T
Q  322 tat 324  Q
    |||    
T  35056898 tat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 222 - 346
Target Start/End: Original strand, 30717459 - 30717584
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||| ||||||||||| |  |  ||||| |||| |||||||||||||| |||||||||| ||||||||||||||| |||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 30717558  T
Q  322 tatgtga-tttttcaaattattagct 346  Q
    ||||||| ||||||||||||||||||    
T  30717559 tatgtgattttttcaaattattagct 30717584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 223 - 345
Target Start/End: Complemental strand, 44860449 - 44860326
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    |||||||||| | ||||||||| |||||| ||||  ||||||||||||| |||||||||| ||||| ||||||||||||||| | |||||| ||||||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaatt 44860350  T
Q  323 atgtgatttt-tcaaattattagc 345  Q
    ||| |||||| |||||||||||||    
T  44860349 atgcgattttctcaaattattagc 44860326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 36756275 - 36756396
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatta 323  Q
    ||||||||||| ||||||| |||||||||||||| || |||||||||  ||| |||| ||||||  ||||||||||||||||| |||||| |||||||||    
T  36756275 atgaagcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaatta 36756374  T
Q  324 tgtgattt-ttcaaattattag 344  Q
    ||| |||| |||||||||||||    
T  36756375 tgttatttcttcaaattattag 36756396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 26769641 - 26769518
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||||||||||||||||  |  |||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||   ||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacaccagat 26769542  T
Q  322 tatgtgat-ttttcaaattattag 344  Q
     ||||||| |||||||||||||||    
T  26769541 aatgtgatattttcaaattattag 26769518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 222 - 347
Target Start/End: Original strand, 11223793 - 11223918
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||| ||||||||||||  || |||| ||||  |||||||||||||||| ||| |||||||||||||||||||| |||||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagacag-tgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaat 11223891  T
Q  322 tatgtga-tttttcaaattattagctg 347  Q
    ||||| | ||||||||| |||||||||    
T  11223892 tatgttattttttcaaaatattagctg 11223918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 15657980 - 15657871
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt-c 334  Q
    ||||||||||| |||||||||  ||  ||||||||| ||||| |||||||| | |||||||||||||| ||||||||| ||||||||||||||||||| |    
T  15657980 cactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaattatgtgatttttac 15657881  T
Q  335 aaattattag 344  Q
    ||||||||||    
T  15657880 aaattattag 15657871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 345
Target Start/End: Original strand, 18420363 - 18420487
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||||| |||| ||||||||||||||||    |||||| |||| |||| |||||||||  ||||| |||||||||||| |||||  | |||||    
T  18420363 ctatgaagcacagacacttctcggattaggcgtgtcataatgtcgaacacttgtcatgtccgacatggacacaacaccgacacttataattgcattgaat 18420462  T
Q  322 tatgtgatttt-tcaaattattagc 345  Q
    ||||||||||| |||||||||||||    
T  18420463 tatgtgattttctcaaattattagc 18420487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 222 - 332
Target Start/End: Original strand, 34784911 - 34785021
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||||| ||||||||| || ||||||||  |  |||| ||||  |||||||||||| ||||||||||||||||||| | |||||| ||| |||    
T  34784911 ctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaat 34785010  T
Q  322 tatgtgatttt 332  Q
    |||||||||||    
T  34785011 tatgtgatttt 34785021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 12668352 - 12668475
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| |  |||||||| |||||| ||||  | ||||| || || |||||| ||| | ||||||||||||||||||||| |||||| |||||||    
T  12668352 ctatgaagcacggatactcctcgaattaggtgtgtcccaatgtcagatacgtgtcgtatccaataccgacacgacaccgacacttataattacactgaat 12668451  T
Q  322 tatgtga-tttttcaaattattag 344  Q
    ||||| | ||||||||||||||||    
T  12668452 tatgtcattttttcaaattattag 12668475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 27084388 - 27084304
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacactt 306  Q
    |||||||||| || |||||||| |||||||||||| ||| ||| |||||| |||||||||||||||||||| || | ||||||||    
T  27084388 ctatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgacatgaaatcgacactt 27084304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 236 - 331
Target Start/End: Complemental strand, 28524542 - 28524447
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattt 331  Q
    |||| ||| |||||||||||||||  |||| ||||| ||| |||||||||||| |||| ||| |||||| | |||||| |||||||||||||||||    
T  28524542 cacttctcagattaggcgtgtttctgtgtcagacacgtgttgtgtccgacaccaacacaacaacgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 347
Target Start/End: Original strand, 2438661 - 2438774
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatta 323  Q
    ||||||||| | |||||||||||||||||||||  || |||||||||  |||||||||           ||||||||||||||||||||| |||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtc-----------cgacaccgacacttgtaattacactgaatta 2438749  T
Q  324 tgtga-tttttcaaattattagctg 347  Q
    ||||| ||||| |||||||||||||    
T  2438750 tgtgattttttgaaattattagctg 2438774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 23058433 - 23058494
Alignment:
Q  284 acaccgacacgacaccgacacttgtaattatactgaattatgtga--tttttcaaattatta 343  Q
    |||||||||||||||||||||||||||||| |||| |||||||||  |||||||||||||||    
T  23058433 acaccgacacgacaccgacacttgtaattacactggattatgtgatttttttcaaattatta 23058494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 4207972 - 4207864
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtg-atttttc 334  Q
    ||||| ||||||||  ||||||||| ||||| |||| ||||||||||||||||||||||| |||||||  | |||||| ||| ||||||| |  ||||||    
T  4207972 cactcttcggattaaacgtgtttcggtgtcgaacacgtgtcgtgtccgacaccgacacgataccgaca-atataattacactaaattatgcgcttttttc 4207874  T
Q  335 aaattattag 344  Q
    ||||||||||    
T  4207873 aaattattag 4207864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 974809 - 974754
Alignment:
Q  290 acacgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattag 344  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||    
T  974809 acacgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattag 974754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 4882678 - 4882749
Alignment:
Q  275 tcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagc 345  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||||||| | | |||||||||| ||||||    
T  4882678 tcgtgtctgacaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataattagc 4882749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 14996173 - 14996279
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga--ttttt 333  Q
    |||||||||||||||||||||| || |||| ||||| ||| ||||||||||       |||||||||||||||||||| ||| |||||| |||  |||||    
T  14996173 cactcctcggattaggcgtgttccggtgtcagacacgtgt-gtgtccgacaa------gacaccgacacttgtaattacactaaattatatgattttttt 14996265  T
Q  334 caaattattagctg 347  Q
    ||||||||||||||    
T  14996266 caaattattagctg 14996279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 332
Target Start/End: Complemental strand, 17776714 - 17776607
Alignment:
Q  225 tgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattat 324  Q
    |||||||| | ||||||||||||||||| |||  ||| |||||||||  ||||||||| ||||||||  ||||| ||||| | |||||| ||||| ||||    
T  17776714 tgaagcacggacactcctcggattaggcctgtcccgaggtcggacacacgtcgtgtccaacaccgacttgacactgacacatataattacactgacttat 17776615  T
Q  325 gtgatttt 332  Q
    ||| ||||    
T  17776614 gtggtttt 17776607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 18840949 - 18841024
Alignment:
Q  218 gcaactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||||||| | |||||||||||||||| ||||  || |||||||||  ||||||||| |||||||||||    
T  18840949 gcaactatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacac 18841024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 37559036 - 37558981
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgattttt-caaattattagctg 347  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctg 37558981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 19536397 - 19536450
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga--tttttcaaattattag 344  Q
    ||||||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  19536397 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattag 19536450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 332
Target Start/End: Original strand, 32749794 - 32749864
Alignment:
Q  262 tgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt 332  Q
    |||||||||| ||||  |||||||| ||||||||||| ||||||| | |||| ||||||||||||||||||    
T  32749794 tgtcggacacatgtcacgtccgacatcgacacgacactgacacttattattacactgaattatgtgatttt 32749864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 341
Target Start/End: Original strand, 34337152 - 34337225
Alignment:
Q  264 tcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattat 341  Q
    |||||||| ||| |||||||||||||||| ||||||||||||||||||||     |||||||||| |||||||||||||    
T  34337152 tcggacacgtgttgtgtccgacaccgacaggacaccgacacttgtaatta-----aattatgtgattttttcaaattat 34337225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 20539672 - 20539729
Alignment:
Q  291 cacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    ||||||||||||||||||||||| ||| |||||| ||| |||||||||||||||||||    
T  20539672 cacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctg 20539729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 33153488 - 33153443
Alignment:
Q  288 cgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||    
T  33153488 cgacacgacacggacacttgtaattacactgaattatgtgattttt 33153443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 293
Target Start/End: Original strand, 38117098 - 38117170
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||||| | ||| |||||||||||||||||  || |||||||||| ||| |||||||||||| ||||    
T  38117098 actatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacac 38117170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 220 - 331
Target Start/End: Complemental strand, 41843567 - 41843462
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactga 319  Q
    ||||||||||||||| |||||||||||| | ||||||  |  |||||||||| ||||| ||      ||||||| |||||||||| | ||||||||| ||    
T  41843567 aactatgaagcacagacactcctcggataaagcgtgtccccgtgtcggacacgtgtcgcgt------ccgacacaacaccgacacatataattataccga 41843474  T
Q  320 attatgtgattt 331  Q
    ||||||||||||    
T  41843473 attatgtgattt 41843462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 5040793 - 5040736
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat---ttttcaaattattagctg 347  Q
    ||||||||||||||||||||| | |||||||||||||   ||||||||||||||||||    
T  5040793 cgacaccgacacttgtaattacattgaattatgtgattttttttcaaattattagctg 5040736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 18422022 - 18421971
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattatta 343  Q
    ||||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattatta 18421971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 293
Target Start/End: Complemental strand, 28596587 - 28596517
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcga-tgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||| | |||||||||||||||| ||||  ||| |||||||||| |||||||||||||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtc-cgagtgtcggacacgtgtcgtgtccgacaccgacac 28596517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 343
Target Start/End: Original strand, 30404850 - 30404901
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattatta 343  Q
    |||| |||||||||||||||| |||||||||||||| |||||||||||||||    
T  30404850 cgacgccgacacttgtaattacactgaattatgtgattttttcaaattatta 30404901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 332
Target Start/End: Original strand, 36096303 - 36096414
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaa 320  Q
    |||||||||||| | ||||| | || | ||||||||  |  |||| ||||| |||||||||||||| ||||||||||||||||  | |||||| |||| |    
T  36096303 actatgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgca 36096402  T
Q  321 ttatgtgatttt 332  Q
    || |||||||||    
T  36096403 ttttgtgatttt 36096414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 341
Target Start/End: Original strand, 11307932 - 11308053
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtc-gtgtccgacaccgaca-cgacaccgacacttgtaattatact 317  Q
    ||||||||||||| | ||||||||||||||   |||||||| ||||||||||  ||| |||||| ||||||||| ||||| |||||| | | |||| |||    
T  11307932 aactatgaagcacggacactcctcggatta--agtgtttcggtgtcggacacgcgtcggtgtccaacaccgacaccgaca-cgacacctatgattacact 11308028  T
Q  318 gaattatgtga-tttttcaaattat 341  Q
    ||||||||| | |||||||||||||    
T  11308029 gaattatgtcattttttcaaattat 11308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 19580225 - 19580293
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccga 290  Q
    ||||||||||||| ||||| |||||||||  |||||| | ||| |||||| ||| ||||||||||||||    
T  19580225 ctatgaagcacagacactcttcggattagatgtgttttggtgttggacacgtgttgtgtccgacaccga 19580293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 19942370 - 19942314
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgaca 292  Q
    |||||||||||||||||||||  || |||| ||||| || |||||||||||||||||    
T  19942370 cactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 347
Target Start/End: Original strand, 21374706 - 21374754
Alignment:
Q  300 gacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    |||||||||||||| |||||||||||| | |||||||||||||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctg 21374754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 345
Target Start/End: Original strand, 27286261 - 27286345
Alignment:
Q  262 tgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattagc 345  Q
    |||||||||  |||||||||||||| ||||| ||||  ||||| | |||||| ||| ||||||||||| || |||||||||||||    
T  27286261 tgtcggacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaattatgtgatcttatcaaattattagc 27286345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 333
Target Start/End: Complemental strand, 38442366 - 38442326
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  38442366 cgacaccgacacttataattatattgaattatgtgattttt 38442326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 343
Target Start/End: Complemental strand, 2331922 - 2331802
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||| ||||| || || | |||||||||||||   | |||| ||||| ||  ||| ||||||| ||||||||||||||||   ||| || |||||||    
T  2331922 ctatgaaacacagacattcattggattaggcgtgtcctggtgtcagacacgtgctgtgcccgacactgacacgacaccgacac--ataaatacactgaat 2331825  T
Q  322 tatgtgatttt-tcaaattatta 343  Q
    ||||||||||| |||||||||||    
T  2331824 tatgtgattttctcaaattatta 2331802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 15972932 - 15972881
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattatta 343  Q
    ||||||||||||||||||||| |||||||| ||| | |||||||||||||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttttcaaattatta 15972881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 15972992 - 15972921
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||| | || || |||||||||| ||||  ||  ||||||||| |||||||||||||||||||||    
T  15972992 ctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacac 15972921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 18841014 - 18841065
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    |||||||||||||||||||| ||| |||||||| | ||||||||||||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattattag 18841065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 24009414 - 24009343
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||| | ||||||| |||| ||||||||  |  |||| ||||| |||||||||||||||||||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 12224337 - 12224271
Alignment:
Q  227 aagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||  ||||||| |||||||||||||  |  |||||||||| | |||||||||||||||||||    
T  12224337 aagcacaaacactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacac 12224271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 350
Target Start/End: Original strand, 18889575 - 18889649
Alignment:
Q  277 gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagctgcgt 350  Q
    |||||||||||  ||| ||||||||||| | | |||| |||||||||||||||||| |||| |||||||| ||||    
T  18889575 gtgtccgacacaaacaagacaccgacacatatgattacactgaattatgtgattttctcaatttattagcggcgt 18889649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 331
Target Start/End: Original strand, 29367283 - 29367382
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||||  || |||||||||||||| ||| ||| |||||||||| |||          |||||||||| ||||||| ||||||||| ||| |||    
T  29367283 ctatgaagcacaaacattcctcggattaggcatgtctcggtgtcggacacatgt----------accgacacgataccgacatttgtaattacactaaat 29367372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 343
Target Start/End: Complemental strand, 36281795 - 36281693
Alignment:
Q  243 cggattaggcgtgtttcgatgtcggacacctgtc-gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaatta 340  Q
    ||||||||||||||||||  |||| ||||  ||| ||||||||||| ||||| ||| ||| || | | |||| ||| |||||||||||||| ||||||||    
T  36281795 cggattaggcgtgtttcggcgtcgaacacacgtccgtgtccgacacggacaccacatcgaaacatatgattacactaaattatgtgattttctcaaatta 36281696  T
Q  341 tta 343  Q
    |||    
T  36281695 tta 36281693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 39323316 - 39323270
Alignment:
Q  300 gacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||||| |||||||||||| ||||| |||||||||||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattagc 39323270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 304
Target Start/End: Original strand, 42511322 - 42511403
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacac 304  Q
    ||||||||||| | ||||||||||||||| |||||  |  |||||||||| ||| ||||||||||| || |||||||| ||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacactga-acgacaccaacac 42511403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 5040839 - 5040782
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||| ||| |||||||||  ||  ||||||||| |||||||||||||||||||||    
T  5040839 cactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacac 5040782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 21624326 - 21624270
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga--tttttcaaattattagctg 347  Q
    ||||||||||||||||||||| |||||||||||  |  ||||| |||||||||||||    
T  21624326 cgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctg 21624270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 24894454 - 24894393
Alignment:
Q  287 ccgacacgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattagctg 347  Q
    ||||||||| ||| |||||| |||||  ||||||||||||||| |||| |||||||||||||    
T  24894454 ccgacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattattagctg 24894393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 34691805 - 34691858
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||| | |||||| |||||||||| ||||||| |||||||||||||    
T  34691805 cgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34691858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 34714217 - 34714270
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||| | |||||| |||||||||| ||||||| |||||||||||||    
T  34714217 cgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 44635572 - 44635520
Alignment:
Q  273 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatt 330  Q
    |||||||||||||||||     ||||||||||||||||||| ||||||||| ||||||    
T  44635572 tgtcgtgtccgacaccg-----acaccgacacttgtaattacactgaattacgtgatt 44635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 5367251 - 5367199
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgattt-ttcaaattattag 344  Q
    |||||||||||| | |||||| |||||||||||||||||  ||||||||||||    
T  5367251 cgacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 5891738 - 5891790
Alignment:
Q  246 attaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacac 298  Q
    ||||| ||||| |||||||| ||||| |||||||||  |||||||||||||||    
T  5891738 attagacgtgtctcgatgtctgacacgtgtcgtgtcaaacaccgacacgacac 5891790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 18622669 - 18622613
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattag 344  Q
    ||||||||||| |||| | |||||| |||||||||||||||||| | ||||||||||    
T  18622669 gacacgacaccaacacgtataattacactgaattatgtgattttattaaattattag 18622613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 20242667 - 20242738
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgt-ttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||||| ||||| |||||| ||||||||  ||| |||| ||||| ||| |||||||||||||||||    
T  20242667 ctatgaagcacagacactcttcggataaggcgtgtcctcg-tgtcagacacgtgttgtgtccgacaccgacac 20242738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 20473381 - 20473329
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    ||||| ||||||||||||||| |||||||||| ||| ||||| ||||||||||    
T  20473381 cgacatcgacacttgtaattacactgaattatatgagttttttaaattattag 20473329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 345
Target Start/End: Original strand, 24975295 - 24975378
Alignment:
Q  262 tgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||| ||| ||||| ||||| |||||||||||||| | | || ||| ||||||||||  |||||| |||||||||||||    
T  24975295 tgtcggacacatgt-gtgtctgacacggacacgacaccgacgcatatatttacactgaattatacgattttctcaaattattagc 24975378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 30335476 - 30335424
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    ||||||||||| ||||||||| ||| |||||||| | ||||||||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattag 30335424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 35447870 - 35447926
Alignment:
Q  276 cgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt 332  Q
    |||||||| ||| ||||||||||  |||||| || |||||||||||||||| |||||    
T  35447870 cgtgtccgtcacggacacgacacaaacacttatagttatactgaattatgtaatttt 35447926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 42832277 - 42832329
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||||||||| |||||| |||||| ||||| ||||| |||||||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagc 42832329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 8564 - 8687
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||||| |||||||||||  |  |||||||||| | |||||||||| |||||||||||||||||| |||||||||||| ||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacgacaccgacatttgtaattataccgaat 8663  T
Q  322 tatgtgat-ttttcaaattattag 344  Q
    |||||||| |||||||||||||||    
T  8664 tatgtgatattttcaaattattag 8687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 71855 - 71727
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||||||||||| |||||  || |||||||||| ||| |||||||||||||||||||||| |||||| ||||||| |||||||    
T  71855 ctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaat 71756  T
Q  322 tatgtga---tttttcaaattattagctg 347  Q
    | |||||   |||||||||||||||||||    
T  71755 tgtgtgattttttttcaaattattagctg 71727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 7e-28; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 223 - 345
Target Start/End: Original strand, 30982808 - 30982931
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    |||||||||| | ||||| | |||||||||||||  || |||||||||| ||||||||| |||||||||||||||||||||||| |||||| |||||| |    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaat 30982907  T
Q  323 atgtgatttt-tcaaattattagc 345  Q
    |||||||||| |||||| ||||||    
T  30982908 atgtgattttctcaaatcattagc 30982931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 19482798 - 19482675
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    |||||||||||   |||||||||||||||| ||||  |  |||||||||| |||||||||| | |||||||||||||| ||||||||||||| || ||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaat 19482699  T
Q  322 tatgtgat-ttttcaaattattag 344  Q
    |||||||| |||||||||||||||    
T  19482698 tatgtgatattttcaaattattag 19482675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 221 - 347
Target Start/End: Original strand, 23292925 - 23293041
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaa 320  Q
    |||||||||||| | |||||||||||||||||||||  || |||||||||| |||||||||           ||||||||||||||||||||||||||||    
T  23292925 actatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc-----------cgacaccgacacttgtaattatactgaa 23293013  T
Q  321 ttatgtga-tttttcaaattattagctg 347  Q
    |||||||| |||||||||||||||||||    
T  23293014 ttatgtgattttttcaaattattagctg 23293041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 51701385 - 51701262
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | | |||||||||||| |||||||||||||   || || |||||||| |||||||||||||||||  ||||||||||||| ||| |||    
T  51701385 ctatgaagcacggacgctcctcggattaagcgtgtttcgatg---gatacgtgtcgtgttcgacaccgacacgacactaacacttgtaattacactcaat 51701289  T
Q  322 tatgtga-tttttcaaattattagctg 347  Q
    ||||| | |||||||||||||||||||    
T  51701288 tatgtaattttttcaaattattagctg 51701262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 24613630 - 24613753
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | ||||||| ||||||| |||||   | |||| ||||| ||||||||| |||||||||| |||||||||||||||| ||| | |||||    
T  24613630 ctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaat 24613729  T
Q  322 tatgtgatttt-tcaaattattag 344  Q
    ||||||||||| ||||||||||||    
T  24613730 tatgtgattttctcaaattattag 24613753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 221 - 344
Target Start/End: Original strand, 15724482 - 15724602
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaa 320  Q
    |||||||||||||   |||||||||||||||||||||| | |||| ||||| ||| ||||||||||||||||||||||||||     ||||||| |||||    
T  15724482 actatgaagcacataaactcctcggattaggcgtgttttggtgtctgacacgtgttgtgtccgacaccgacacgacaccgac-----taattatgctgaa 15724576  T
Q  321 ttatgtga--tttttcaaattattag 344  Q
    |||| |||  ||||||||||||||||    
T  15724577 ttatatgatttttttcaaattattag 15724602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 223 - 345
Target Start/End: Complemental strand, 848080 - 847957
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    |||||| ||| | ||||||| |||||||| ||||  || |||  ||||| | |||||||||||||| ||| |||||||||||||||||||||| ||||||    
T  848080 tatgaaacacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaatt 847981  T
Q  323 atgtgatttt-tcaaattattagc 345  Q
    |||| ||||| |||||||||||||    
T  847980 atgtaattttctcaaattattagc 847957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 4383446 - 4383375
Alignment:
Q  273 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttttcaaattattag 344  Q
    ||||||||  |||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||    
T  4383446 tgtcgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtgatttttcaaattattag 4383375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 345
Target Start/End: Complemental strand, 30838335 - 30838216
Alignment:
Q  227 aagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgt 326  Q
    |||||| | |||||||||| |||||||||| | | |||||||||| ||||| ||||||||| ||||||||||||| |||| |||||| ||| |||||| |    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacactaaattatat 30838236  T
Q  327 gatttt-tcaaattattagc 345  Q
     ||||| |||||||||||||    
T  30838235 aattttatcaaattattagc 30838216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 223 - 347
Target Start/End: Original strand, 3947702 - 3947821
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    |||||||||| | |||||||||||||||| ||||   | |||||||||| ||||||||||||      |||||||| |||||||||||||| ||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccga------cacgacactgacacttgtaattacactgaatt 3947795  T
Q  323 atgtga-tttttcaaattattagctg 347  Q
    ||| || |||||||||||||||||||    
T  3947796 atgcgattttttcaaattattagctg 3947821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 40481743 - 40481644
Alignment:
Q  239 tcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttttcaaat 338  Q
    ||||||||||| | |||||||| |||||||||| |||||||||| |||||||||  ||||      ||||||||| ||||||||||||||||||||||||    
T  40481743 tcctcggattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacac------ttgtaattacactgaattatgtgatttttcaaat 40481650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 333
Target Start/End: Complemental strand, 19312451 - 19312354
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||| ||| |||||| ||||| ||| |||||||||| |||||| ||||||| |||||||||||||| |||| |||||| ||||||| |||||||||||    
T  19312451 cacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatcatgtgattttt 19312354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 12797338 - 12797389
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttttcaaattattag 344  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12797338 cgacaccgacacttgtaattacactgaattatgtgatttttcaaattattag 12797389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 22234859 - 22234930
Alignment:
Q  262 tgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||| ||||||||| |||||||||||||||||||||| |  ||||| |||||||||||||||||||    
T  22234859 tgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgattttt 22234930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 222 - 346
Target Start/End: Complemental strand, 47264116 - 47263991
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||||| | ||| |||||||||||||||   | |||| ||||  |||||| || |||||| ||| |||| ||||| ||||||||| || ||||    
T  47264116 ctatgaagcacagacgctcttcggattaggcgtgtcctggtgtcagacatgtgtcgtatctgacaccaacatgacatcgacatttgtaattacacagaat 47264017  T
Q  322 tatgtgattttt-caaattattagct 346  Q
    |||||||||||| |||||||||||||    
T  47264016 tatgtgatttttacaaattattagct 47263991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 4157208 - 4157140
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttttcaaattattagctgcgtgtcagtgtctgtg 363  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||||| |  |||||||||||||||    
T  4157208 cgacaccgacacttgtaattgcactaaattatgtgatttttcaaattattagtt--gtgtcagtgtctgtg 4157140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 12895214 - 12895285
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||||   |||||||||||||||||||||  |||||||||| || |||||||||||||||||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacac 12895285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 11596348 - 11596406
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagct 346  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  11596348 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagct 11596406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 16073453 - 16073403
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttttcaaattatta 343  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  16073453 cgacaccgacacttgtaattacactgaattatgcgatttttcaaattatta 16073403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 12895110 - 12895171
Alignment:
Q  287 ccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    |||||||||||||||||||||||||||   |||||||||||| |||||||||||||||||||    
T  12895110 ccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctg 12895171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 226 - 347
Target Start/End: Complemental strand, 21945618 - 21945507
Alignment:
Q  226 gaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatg 325  Q
    |||||| || |||||||||||||||||||||| || |||||||||  |||| ||||||||||||||||           ||||||||| |||||||||||    
T  21945618 gaagcatagacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacac-----------ttgtaattacactgaattatg 21945530  T
Q  326 tga-tttttcaaattattagctg 347  Q
    | | |||||||||||||||||||    
T  21945529 tcattttttcaaattattagctg 21945507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 332
Target Start/End: Original strand, 5414100 - 5414211
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaa 320  Q
    |||||||||||| | ||||||| |||| ||| ||||  |  |||| ||||| ||||||||||||||| ||||||||||||| || | |||||| |||| |    
T  5414100 actatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgca 5414199  T
Q  321 ttatgtgatttt 332  Q
    || |||||||||    
T  5414200 ttttgtgatttt 5414211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 29205501 - 29205450
Alignment:
Q  295 acaccgacacttgtaattatactgaattatgtgat-ttttcaaattattagc 345  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 29205450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 30299008 - 30298950
Alignment:
Q  291 cacgacaccgacacttgtaattatactgaattatgtga--tttttcaaattattagctg 347  Q
    ||||||||||||||||||||||| |||||||||||| |  |||||||||||||||||||    
T  30299008 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctg 30298950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 30327876 - 30327818
Alignment:
Q  291 cacgacaccgacacttgtaattatactgaattatgtga--tttttcaaattattagctg 347  Q
    ||||||||||||||||||||||| |||||||||||| |  |||||||||||||||||||    
T  30327876 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctg 30327818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 34306744 - 34306815
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||||   || ||||| |||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 34306815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 320
Target Start/End: Original strand, 53490724 - 53490791
Alignment:
Q  253 gtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaa 320  Q
    |||||||| ||| |||||  ||||||||||||||||||||||| || |||||||||||||||| ||||    
T  53490724 gtgtttcggtgttggacatttgtcgtgtccgacaccgacacgatactgacacttgtaattatattgaa 53490791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 343
Target Start/End: Complemental strand, 904012 - 903930
Alignment:
Q  262 tgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattatta 343  Q
    |||||||||| |||||||||| ||||||| |||| || || || | |||||| |||||||||||||||||| |||||||||||    
T  904012 tgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 27706123 - 27706217
Alignment:
Q  239 tcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    ||||| ||||||||||||  || | ||||| || ||||||||||||||   |||||||||  ||||||||||||| ||| |||||||||||||||    
T  27706123 tcctcagattaggcgtgtcccggtatcggatacgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatgtgattttt 27706217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 28964248 - 28964302
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagct 346  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||||||||||||    
T  28964248 cgacacagacacttgtaattacactgaattatgtgattttttcaaattattagct 28964302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 332
Target Start/End: Original strand, 44132613 - 44132683
Alignment:
Q  262 tgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt 332  Q
    |||| ||||| ||| |||| ||||||| ||||||||||||||| | |||||||||||||||| ||||||||    
T  44132613 tgtcagacacatgttgtgttcgacaccaacacgacaccgacacatataattatactgaattacgtgatttt 44132683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 293
Target Start/End: Complemental strand, 4157266 - 4157197
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||| ||||||||| |||||| || | ||| |||||||||  |||||||||||||||||||||    
T  4157266 atgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacac 4157197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 293
Target Start/End: Complemental strand, 4157553 - 4157484
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||| || ||||||||| ||||||||| | ||| |||||||||  |||||||||||||||||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacac 4157484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 28084589 - 28084525
Alignment:
Q  285 caccgacacgacaccgacacttgtaattatactgaattatgtgat--ttttcaaattattagctg 347  Q
    |||||||||||||| |||||||||||||| | |||||||||||||  |||||||||| |||||||    
T  28084589 caccgacacgacacagacacttgtaattacattgaattatgtgatttttttcaaattcttagctg 28084525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 49431085 - 49431029
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat--ttttcaaattattagctg 347  Q
    |||||||||||||| |||||| |||||||||||||||  ||||||||||||||||||    
T  49431085 cgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctg 49431029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 347
Target Start/End: Original strand, 715545 - 715663
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||||||||||||||||  |  |||||||||  ||||||||         ||| |||||| ||||||||||||| |||||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---------acaagacaccaacacttgtaattacactgaat 715635  T
Q  322 tatgtga--tttttcaaattattagctg 347  Q
    |||||||  ||||| |||||||||||||    
T  715636 tatgtgattttttttaaattattagctg 715663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 347
Target Start/End: Original strand, 752871 - 752989
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||||||||||||||||  |  |||||||||  ||||||||         ||| |||||| ||||||||||||| |||||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---------acaagacaccaacacttgtaattacactgaat 752961  T
Q  322 tatgtga--tttttcaaattattagctg 347  Q
    |||||||  ||||| |||||||||||||    
T  752962 tatgtgattttttttaaattattagctg 752989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 333
Target Start/End: Complemental strand, 42640588 - 42640548
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  42640588 cgacaccgacacttgtaattacactgaattatgtgattttt 42640548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 54580023 - 54580075
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    |||||||||||||| |||||| |||||||||||||| ||||||||||||||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 8423657 - 8423728
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgaca 292  Q
    ||||||| |||| | |||| ||| ||||||||||||  || ||||||||| |||||||||||||||||||||    
T  8423657 actatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgaca 8423728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 330
Target Start/End: Original strand, 28000672 - 28000779
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacacc-gacacgacaccgacacttgtaattatactgaatt 322  Q
    ||||||||| | ||||| || ||||||| |||| ||| |||| ||||| |||||||  | ||||  |||| |||||||||||||||||||| ||||||||    
T  28000672 atgaagcacggacactcatcagattaggtgtgtctcggtgtcagacacgtgtcgtgaacaacacttgacatgacaccgacacttgtaattacactgaatt 28000771  T
Q  323 atgtgatt 330  Q
    || |||||    
T  28000772 atatgatt 28000779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 34306804 - 34306855
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttttcaaattattag 344  Q
    ||||||||||||||||||||| |||  ||||| |||||||||||||||||||    
T  34306804 cgacaccgacacttgtaattacactacattatctgatttttcaaattattag 34306855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 50280958 - 50280885
Alignment:
Q  276 cgtgtccgacaccgacacgacaccgacacttgtaatt--atactgaattatgtg-atttttcaaattattagctg 347  Q
    |||||||||||| |||||||||||| |||||||||||  | ||| ||||||||| ||||||||||||||||||||    
T  50280958 cgtgtccgacac-gacacgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattattagctg 50280885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 34589645 - 34589719
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacac 298  Q
    |||||||||||  |||||||||||||||||||  ||| |||| || || | ||||||||||||| ||||||||||    
T  34589645 atgaagcacaggtactcctcggattaggcgtgcctcggtgtcagatacgtatcgtgtccgacactgacacgacac 34589719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 38148680 - 38148778
Alignment:
Q  248 taggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||| |  |||| || || |||||||||| ||||| |||||||| ||||| ||  ||||| |||||||||||||||||| ||||| |||||||    
T  38148680 taggcgtgttccagtgtcagatacgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaattatgtgattttctcaaactattagc 38148778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 6485613 - 6485662
Alignment:
Q  295 acaccgacacttgtaattatactgaattatgtga-tttttcaaattatta 343  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 6879465 - 6879506
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttttc 334  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  6879465 cgacaccgacacttgtaattacacttaattatgtgatttttc 6879506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 8423718 - 8423771
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||||||| || |||||| |||||||||||||||||| |||||||||||||    
T  8423718 cgacaccgacatttataattacactgaattatgtgattttctcaaattattagc 8423771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 344
Target Start/End: Original strand, 21658797 - 21658866
Alignment:
Q  276 cgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattag 344  Q
    |||||||||||| |||| || ||||||||||  ||||||| | |||||||||||||| ||||||||||||    
T  21658797 cgtgtccgacactgacatgaaaccgacacttaaaattatagtaaattatgtgattttctcaaattattag 21658866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 35157923 - 35157996
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||||| | |||| ||||||||| ||||||| || ||| |||||  ||||||||| |||||||||||    
T  35157923 aactatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacac 35157996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 35157986 - 35158043
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtgattttt-caaattattagctgcgt 350  Q
    ||||||||||||| |||||| ||| ||||||||||||||| ||||||||||| |||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgt 35158043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 49431131 - 49431074
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||||| ||||||||  || ||| |||||| |||||||||||||||||||||    
T  49431131 cactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacac 49431074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 343
Target Start/End: Complemental strand, 24343632 - 24343515
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtc-gtgtccgacaccgacacgacaccgacacttgtaattatactgaa 320  Q
    ||||||||||| | |||||||| || |||||||||  || ||||||||||  ||| ||||| |||||||||||||||||      | |||||| ||||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacacgacacc------tataattacactgaa 24343539  T
Q  321 ttatgtgatttt-tcaaattatta 343  Q
    |||||| ||||| |||||||||||    
T  24343538 ttatgtaattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 331
Target Start/End: Original strand, 46083965 - 46084029
Alignment:
Q  267 gacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattt 331  Q
    ||||| |||||||||||| || |||||||||||||||| | |||||| |||  ||||||||||||    
T  46083965 gacacgtgtcgtgtccgatactgacacgacaccgacacatataattacactagattatgtgattt 46084029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 2361915 - 2361986
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||| | ||||| || ||||||| |||| ||| |||| |||||  ||||||||||||||||||||    
T  2361915 ctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacac 2361986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 2361975 - 2362030
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    |||||||||||||| |||||| ||| |||||||| | |||||||||||||||||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctg 2362030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 333
Target Start/End: Complemental strand, 12708221 - 12708166
Alignment:
Q  278 tgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||  ||||||||| ||||||||||||||| |||||||||| | ||||||    
T  12708221 tgtccgacatagacacgacatcgacacttgtaattacactgaattatttcattttt 12708166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 345
Target Start/End: Complemental strand, 15029890 - 15029771
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| |  |||||||||||||||| ||| | | ||||||     |||| |||| ||| ||||| ||||||| |||| | |||||| |||||||    
T  15029890 ctatgaagcacgggtactcctcggattaggcatgtcttggtgtcggg----tgtcatgtctgacgccgac-cgacaccaacacatataattacactgaat 15029796  T
Q  322 tatgtgat-ttttcaaattattagc 345  Q
    |||||||| ||||||||||||||||    
T  15029795 tatgtgatattttcaaattattagc 15029771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 333
Target Start/End: Original strand, 19500787 - 19500898
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| |  |||||| ||||||||||||  ||| | || ||  | |||||||||||||||||||||||||||  ||| | |||||| ||| ||     
T  19500787 ctatgaagcacggatactccttggattaggcgtgcctcggtatcagaggcgtgtcgtgtccgacaccgacacgacaccatcacatataattacactaaaa 19500886  T
Q  322 tatgtgattttt 333  Q
    |||||| |||||    
T  19500887 tatgtgtttttt 19500898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 35161155 - 35161092
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgac 285  Q
    ||||||||||| | ||||  |||||||||| ||||| || |||||||||| |||||||||||||    
T  35161155 ctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgac 35161092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 37496783 - 37496724
Alignment:
Q  273 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt 332  Q
    ||||||||||| || |||||| |||||||||||||| |||| | |||||||||| |||||    
T  37496783 tgtcgtgtccggcaacgacacaacaccgacacttgtgattacattgaattatgtcatttt 37496724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 38847012 - 38847067
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    |||||| |||||||||||||| ||||||| || ||| |||||||||||||||||||    
T  38847012 cgacactgacacttgtaattacactgaataatatgattttttcaaattattagctg 38847067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 53381530 - 53381605
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtc-gtgtccgacaccgacacgac 296  Q
    ||||||||||| | |||||||||||||||| ||||  || ||||||| ||  ||| ||||||||||||||||||||    
T  53381530 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacacgac 53381605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 334
Target Start/End: Complemental strand, 4157495 - 4157454
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgatttttc 334  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  4157495 cgacaccgacacttgtaattgcactaaattatgtgatttttc 4157454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 9996898 - 9996849
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtgatttt-tcaaattatt 342  Q
    |||||||| || | ||||||||||||||||||||||||| ||||||||||    
T  9996898 gacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 14126093 - 14126162
Alignment:
Q  276 cgtgtccgacaccgacacgacacc-gacacttgtaattatactgaattatgtga-tttttcaaattatta 343  Q
    |||||||||||| ||||||| ||  ||||||| |||||| |||||||||||||| ||| |||||||||||    
T  14126093 cgtgtccgacacggacacgagacatgacacttataattacactgaattatgtgactttatcaaattatta 14126162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 17425348 - 17425381
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgt 256  Q
    |||||||||||| |||||||||||||||||||||    
T  17425348 tatgaagcacagacactcctcggattaggcgtgt 17425381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 32915589 - 32915658
Alignment:
Q  277 gtgtccgacaccgacacgaca-ccgacacttgtaattatactgaattatgtgatttttcaaattattagc 345  Q
    ||||| |||| |||||||||| |||| || | |||||| | ||||||||||||||||| |||||||||||    
T  32915589 gtgtctgacatcgacacgacaaccgaaacatataattacattgaattatgtgattttttaaattattagc 32915658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 5775353 - 5775409
Alignment:
Q  288 cgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattatta 343  Q
    ||||| ||||||||||| | |||||| ||| |||||||||||||| |||||||||||    
T  5775353 cgacatgacaccgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 11596297 - 11596345
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggaca 270  Q
    ||||||||||| | |||||||| ||||||||||||  ||||||||||||    
T  11596297 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 12708261 - 12708213
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggaca 270  Q
    ||||||||||| | | |||||||||||||||||||| ||||||| ||||    
T  12708261 ctatgaagcacggacgctcctcggattaggcgtgttccgatgtccgaca 12708213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 298
Target Start/End: Complemental strand, 16184950 - 16184874
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacac 298  Q
    ||||||||||||  |||||||||||||||||||||  |  |||||||||    |||| | |||||||||||||||||    
T  16184950 ctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggacaggcatcgtatgcgacaccgacacgacac 16184874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 342
Target Start/End: Original strand, 21873316 - 21873421
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tc 334  Q
    ||||||| ||||||| |||||  || |||||||||| ||||  |||||| ||| |||||| |||| ||| |  ||||  |||||||||||||||||| ||    
T  21873316 cactccttggattagacgtgtcccggtgtcggacacgtgtcacgtccgagaccaacacgataccggcacat--aatttcactgaattatgtgattttatc 21873413  T
Q  335 aaattatt 342  Q
    ||||||||    
T  21873414 aaattatt 21873421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 342
Target Start/End: Original strand, 21929177 - 21929282
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tc 334  Q
    ||||||| ||||||| |||||  || |||||||||| ||||  |||||| ||| |||||| |||| ||| |  ||||  |||||||||||||||||| ||    
T  21929177 cactccttggattagacgtgtcccggtgtcggacacgtgtcacgtccgagaccaacacgataccggcacat--aatttcactgaattatgtgattttatc 21929274  T
Q  335 aaattatt 342  Q
    ||||||||    
T  21929275 aaattatt 21929282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 28720924 - 28720880
Alignment:
Q  303 acttgtaattatactgaattatgtgatttttcaaattattagctg 347  Q
    ||||||| ||| |||| ||||| ||||||||||||||||||||||    
T  28720924 acttgtagttacactgcattatatgatttttcaaattattagctg 28720880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 343
Target Start/End: Complemental strand, 40742667 - 40742599
Alignment:
Q  276 cgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattatta 343  Q
    |||||| ||||||||||||||| |||||| | |||||| |||  ||||| ||||||| |||||||||||    
T  40742667 cgtgtctgacaccgacacgacatcgacacatataattacactagattatatgattttctcaaattatta 40742599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 222 - 333
Target Start/End: Complemental strand, 3058 - 2947
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||| ||||| | |||||||||||||||||||||| || ||||| |||| ||||||||| || ||||||||||||| || ||||||||||| ||| |||    
T  3058 ctatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaat 2959  T
Q  322 tatgtgattttt 333  Q
    ||||||||||||    
T  2958 tatgtgattttt 2947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 236 - 345
Target Start/End: Original strand, 263315 - 263425
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tc 334  Q
    ||||||||||||||||||||| | | | ||| |||| ||||||||| |||||||||||||||| ||||||| |||||| ||||||||||||| |||| ||    
T  263315 cactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttctc 263414  T
Q  335 aaattattagc 345  Q
    |||||||||||    
T  263415 aaattattagc 263425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 342
Target Start/End: Complemental strand, 53270 - 53189
Alignment:
Q  262 tgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattatt 342  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||| |||||| |||||||||||||||||| ||||||||||    
T  53270 tgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 9678 - 9799
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatta 323  Q
    ||||||||| | ||||||||||||||  |||||  ||||||| ||||  ||||||||| |||||| ||||||||||||||| | |||||| |||||||||    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaatta 9777  T
Q  324 tgtgatttt-tcaaattattag 344  Q
     |||||||| ||||||||||||    
T  9778 agtgattttctcaaattattag 9799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 4976 - 5047
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||||| ||||||||||||||||| ||| || ||||||||||| |||||||||||||||||||||    
T  4976 ctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacac 5047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 19682 - 19583
Alignment:
Q  239 tcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttttcaaat 338  Q
    ||||||||||| | |||||||| |||||||||| |||||||||| |||||||||  ||||      ||||||||| ||||||||||||||||||||||||    
T  19682 tcctcggattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacac------ttgtaattacactgaattatgtgatttttcaaat 19589  T

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Target: scaffold0223 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 20239 - 20176
Alignment:
Q  285 caccgacacgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattattagctg 347  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  20239 caccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctg 20176  T

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Target: scaffold0171 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 333
Target Start/End: Complemental strand, 23641 - 23530
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||||  |||| || |||||| ||||||  |  | |||||||| | |||||||||||||||| ||||||| ||||||| |||||| |||||||    
T  23641 ctatgaagcacaaacacttctgggattatgcgtgtcccagtctcggacacatatcgtgtccgacaccgaaacgacactgacacttataattacactgaat 23542  T
Q  322 tatgtgattttt 333  Q
    ||||||||||||    
T  23541 tatgtgattttt 23530  T

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Target: scaffold0171; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 23485 - 23439
Alignment:
Q  287 ccgacacgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||    
T  23485 ccgacacgacaccgacacttataattacactgaattatgtgattttt 23439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 345
Target Start/End: Original strand, 44494 - 44578
Alignment:
Q  262 tgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||| ||| |||||| |||||||||||| |||||||| | |||||| |||||||||||||||||| ||||||| |||||    
T  44494 tgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagc 44578  T

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Target: scaffold0053 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 8917 - 8846
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||||||||| |  ||||||| |||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 8846  T

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Target: scaffold0154 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 13543 - 13453
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaatt 312  Q
    |||||||| || | |||||||||||||||| || |  |||||||| | || |||||||||||||||||||||||| ||||||| |||||||    
T  13543 ctatgaagtacggacactcctcggattaggtgtatcccgatgtcgtatacgtgtcgtgtccgacaccgacacgaccccgacacatgtaatt 13453  T

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Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 345
Target Start/End: Complemental strand, 92940 - 92813
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgac----acgacaccgacacttgtaattatactg 318  Q
    |||||||||| | |||||||||||||||||||||   | |||| ||||  |||||||||||||||| ||    || | || |||||||||||||| ||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacccaccaacacaaaactgacacttgtaattacactg 92841  T
Q  319 aattatgtgatttt-tcaaattattagc 345  Q
    |||||||| ||||| |||||||||||||    
T  92840 aattatgtaattttctcaaattattagc 92813  T

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Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 123686 - 123650
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtgatt 330  Q
    |||||||||||||||||||| ||||||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgatt 123650  T

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Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 333
Target Start/End: Complemental strand, 83220 - 83179
Alignment:
Q  292 acgacaccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||| ||||||||| |||||||||||| ||||||    
T  83220 acgacaccgacatttgtaattacactgaattatgtcattttt 83179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 223 - 332
Target Start/End: Original strand, 5926 - 6035
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatt 322  Q
    ||||| |||| | ||||||| |||| |||||||| ||  |||| ||||| |||||||| ||||||||| ||||||||||||| | |||||| |||| |||    
T  5926 tatgaggcacggacactccttggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacaccgatacgacaccgacacatataattacactgcatt 6025  T
Q  323 atgtgatttt 332  Q
     |||||||||    
T  6026 ttgtgatttt 6035  T

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Target: scaffold0025 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 23832 - 23777
Alignment:
Q  290 acacgacaccgacacttgtaattatactgaattatgtgat--ttttcaaattatta 343  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  23832 acacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 23777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 403 - 473
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    |||||||||| | |||||||||||||||| ||||  || ||||||||||  ||||||||||||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 462 - 515
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagc 345  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  462 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagc 515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 24155 - 24029
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacc--tgtcgtgtccgacaccgacacgacaccgacacttgtaattatactga 319  Q
    ||||||||||| | ||||| |||||||||||||||   | ||||||||||   ||| |||||||||||||||||||||| || || |||||||| ||| |    
T  24155 ctatgaagcacggacactcatcggattaggcgtgtccag-tgtcggacacacgtgttgtgtccgacaccgacacgacactgaaac-tgtaattacactaa 24058  T
Q  320 attatgtgattttt-caaattattagctg 347  Q
    |||||| |||||||  |||||||||||||    
T  24057 attatgagatttttgaaaattattagctg 24029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 347
Target Start/End: Original strand, 4821 - 4939
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    ||||||||||| | |||||||||||||||||||||  |  |||||||||  ||||||||         ||| |||||| ||||||||||||| |||||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---------acaagacaccaacacttgtaattacactgaat 4911  T
Q  322 tatgtga--tttttcaaattattagctg 347  Q
    |||||||  ||||| |||||||||||||    
T  4912 tatgtgattttttttaaattattagctg 4939  T

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Target: scaffold0168 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 276 - 343
Target Start/End: Complemental strand, 21119 - 21051
Alignment:
Q  276 cgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattatta 343  Q
    |||||| ||||||||||||| |||||||| | ||||||||| || |||||||||||| |||||||||||    
T  21119 cgtgtctgacaccgacacgataccgacacatataattataccgacttatgtgattttctcaaattatta 21051  T

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Target: scaffold0122 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 8729 - 8673
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtgatttttc-aaattattag 344  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| | ||||||||||    
T  8729 gacacgacaccgacacttataattatactgaactatgtgattttcctaaattattag 8673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 7032 - 7087
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagctg 347  Q
    ||||||| ||||||||||||||||| |||||||| | |||||||||||||||||||    
T  7032 cgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctg 7087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 347
Target Start/End: Complemental strand, 51862 - 51815
Alignment:
Q  301 acacttgtaattatactgaattatgtgat-ttttcaaattattagctg 347  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctg 51815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 46741 - 46690
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtgat-ttttcaaattatta 343  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattatta 46690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 46778 - 46742
Alignment:
Q  220 aactatgaagcacagccactcctcggattaggcgtgt 256  Q
    ||||||||||||| | |||||||||||||||||||||    
T  46778 aactatgaagcacggacactcctcggattaggcgtgt 46742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 17750 - 17801
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtga-tttttcaaattattag 344  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 17801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 14646 - 14580
Alignment:
Q  222 ctatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacacc 288  Q
    |||||||||||   |||||||  |||||||||||| ||| |||||||||| ||||||||||||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc 14580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 344
Target Start/End: Complemental strand, 14580 - 14537
Alignment:
Q  302 cacttgtaattatactgaattatgtgat-ttttcaaattattag 344  Q
    |||||||||||| ||||||||||||||| |||||||||||||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattattag 14537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 13523 - 13407
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatta 323  Q
    ||||||||| | ||||||| |||||||| ||||     |||| ||| | |||||||||||||||||     |||||||| |||||||||  |||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccg-----acaccgacccttgtaattgcactgaatta 13429  T
Q  324 tgtgatttt-tcaaattattag 344  Q
    ||||||||| ||||||||||||    
T  13428 tgtgattttctcaaattattag 13407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 21804 - 21920
Alignment:
Q  224 atgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaatta 323  Q
    ||||||||| | ||||||| |||||||| ||||     |||| ||| | |||||||||||||||||||||     |||| |||||||||  |||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac-----cgacccttgtaattgcactgaatta 21898  T
Q  324 tgtgatttt-tcaaattattag 344  Q
    ||||||||| ||||||||||||    
T  21899 tgtgattttctcaaattattag 21920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 19218 - 19153
Alignment:
Q  278 tgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttttcaaattatta 343  Q
    ||||||| || ||||||||||||||| || |||| | |||||||||||| |||||| |||||||||    
T  19218 tgtccgatactgacacgacaccgacatttttaatcacactgaattatgtcattttttaaattatta 19153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 130538 - 130501
Alignment:
Q  296 caccgacacttgtaattatactgaattatgtgattttt 333  Q
    |||||||||||||||||| |||||||||||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttt 130501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 135308 - 135365
Alignment:
Q  289 gacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||||||| | |||||| || ||||||||||||||| |||||||||||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagc 135365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 174510 - 174563
Alignment:
Q  239 tcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgaca 292  Q
    |||| |||||||||||||| ||||||||||||| || ||||||| |||||||||    
T  174510 tccttggattaggcgtgttccgatgtcggacacatgacgtgtccaacaccgaca 174563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 180023 - 180076
Alignment:
Q  239 tcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgaca 292  Q
    |||| |||||||||||||| ||||||||||||| || ||||||| |||||||||    
T  180023 tccttggattaggcgtgttccgatgtcggacacatgacgtgtccaacaccgaca 180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 345
Target Start/End: Complemental strand, 63831 - 63779
Alignment:
Q  294 gacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    |||||||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  63831 gacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagc 63779  T

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Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 341
Target Start/End: Complemental strand, 57052 - 56932
Alignment:
Q  223 tatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacac-ctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaat 321  Q
    |||||||||||  |||||||| ||||||| || || || |||| ||||| |  | || |||| |||||||||||||| ||||||| | |||| |||||||    
T  57052 tatgaagcacaaacactcctcagattaggtgttttccggtgtcagacacgcattggtctccgtcaccgacacgacactgacacttatgattacactgaat 56953  T
Q  322 tatgtgatttt-tcaaattat 341  Q
    ||| | ||||| |||||||||    
T  56952 tatatcattttctcaaattat 56932  T

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Target: scaffold0376 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 6401 - 6318
Alignment:
Q  263 gtcggacacctgtcgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt-tcaaattattagc 345  Q
    ||||||| | ||||||| || ||||||| ||||||||||||| | |||||| | |||||||||  ||||| |||||||||||||    
T  6401 gtcggacccgtgtcgtgccccacaccgatacgacaccgacacatataattacattgaattatgcaattttgtcaaattattagc 6318  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 70337 - 70286
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgtga-tttttcaaattatta 343  Q
    |||||||||||||| |||||| |||||||||||| | |||||||||||||||    
T  70337 cgacaccgacacttataattacactgaattatgttattttttcaaattatta 70286  T

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Target: scaffold0050; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 70383 - 70326
Alignment:
Q  236 cactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgacac 293  Q
    ||||| ||||||||||| |||   | |||||||||| |||||||||||||||||||||    
T  70383 cactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacac 70326  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 292
Target Start/End: Complemental strand, 90963 - 90892
Alignment:
Q  221 actatgaagcacagccactcctcggattaggcgtgtttcgatgtcggacacctgtcgtgtccgacaccgaca 292  Q
    |||||||||||||  ||||| | ||||||||||||||| | |||||||||| ||| ||||| |||| |||||    
T  90963 actatgaagcacatacactcattggattaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgaca 90892  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 25765 - 25807
Alignment:
Q  290 acacgacaccgacacttgtaattatactgaattatgtgatttt 332  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||    
T  25765 acacgacaccgacacttataattacactaaattatgtgatttt 25807  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 178813 - 178871
Alignment:
Q  288 cgacacgacaccgacacttgtaattatactgaattatg-tga-tttttcaaattattag 344  Q
    ||||| ||||| |||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  178813 cgacatgacactgacacttgtaattacactgaattatgatgattttttcaaattattag 178871  T

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Target: scaffold1528 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 1110 - 1041
Alignment:
Q  277 gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtga-tttttcaaattattagc 345  Q
    |||||| |||||||||| |||| ||||| | || ||| |||||||||||| | |||||||||||||||||    
T  1110 gtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagc 1041  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 326
Target Start/End: Original strand, 45530 - 45563
Alignment:
Q  293 cgacaccgacacttgtaattatactgaattatgt 326  Q
    ||||||||||||||||||||| ||||||||||||    
T  45530 cgacaccgacacttgtaattacactgaattatgt 45563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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