View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0834_low_42 (Length: 256)

Name: NF0834_low_42
Description: NF0834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0834_low_42
NF0834_low_42
[»] chr3 (69 HSPs)
chr3 (7-256)||(33235545-33235793)
chr3 (14-149)||(12914036-12914171)
chr3 (26-149)||(40272813-40272936)
chr3 (26-138)||(6411834-6411945)
chr3 (26-150)||(22609799-22609922)
chr3 (13-149)||(13628791-13628929)
chr3 (13-149)||(39203536-39203670)
chr3 (13-149)||(26869727-26869862)
chr3 (39-150)||(31904856-31904968)
chr3 (13-148)||(26573147-26573282)
chr3 (39-149)||(54484736-54484847)
chr3 (26-149)||(14986990-14987115)
chr3 (13-137)||(34420656-34420781)
chr3 (26-149)||(10795424-10795549)
chr3 (15-149)||(46421035-46421172)
chr3 (13-149)||(516429-516568)
chr3 (13-149)||(1217110-1217244)
chr3 (15-149)||(29366721-29366857)
chr3 (39-149)||(45786215-45786327)
chr3 (13-149)||(53996566-53996703)
chr3 (26-130)||(55401209-55401314)
chr3 (39-146)||(7943036-7943143)
chr3 (16-149)||(13730603-13730738)
chr3 (16-138)||(45948850-45948972)
chr3 (13-146)||(54374349-54374483)
chr3 (39-149)||(49013474-49013586)
chr3 (13-152)||(22122915-22123052)
chr3 (26-149)||(31592882-31593003)
chr3 (13-148)||(8247688-8247826)
chr3 (16-101)||(4495713-4495798)
chr3 (42-131)||(9276313-9276401)
chr3 (42-149)||(15797271-15797376)
chr3 (39-150)||(31672739-31672851)
chr3 (39-100)||(47624088-47624148)
chr3 (16-101)||(54032608-54032693)
chr3 (51-148)||(353351-353450)
chr3 (57-149)||(34771365-34771457)
chr3 (43-138)||(19731052-19731147)
chr3 (39-149)||(25517171-25517282)
chr3 (39-149)||(16735487-16735596)
chr3 (75-149)||(24578007-24578081)
chr3 (13-149)||(25944489-25944626)
chr3 (25-136)||(43114882-43114995)
chr3 (13-97)||(45620881-45620966)
chr3 (65-149)||(52926220-52926304)
chr3 (13-149)||(5173720-5173857)
chr3 (13-133)||(9607223-9607345)
chr3 (43-138)||(19751628-19751723)
chr3 (13-149)||(45139479-45139615)
chr3 (42-100)||(52428527-52428585)
chr3 (17-65)||(35417940-35417988)
chr3 (43-138)||(44403567-44403663)
chr3 (13-100)||(30928197-30928284)
chr3 (111-150)||(31922839-31922878)
chr3 (15-92)||(7696945-7697020)
chr3 (13-75)||(12525427-12525489)
chr3 (75-149)||(24577917-24577991)
chr3 (26-90)||(21875046-21875111)
chr3 (13-77)||(10870025-10870088)
chr3 (13-100)||(33926103-33926190)
chr3 (45-84)||(39212042-39212081)
chr3 (115-158)||(47624221-47624264)
chr3 (115-149)||(4495677-4495711)
chr3 (115-149)||(10484617-10484651)
chr3 (115-149)||(40390363-40390397)
chr3 (115-149)||(54032572-54032606)
chr3 (51-99)||(8410918-8410966)
chr3 (117-149)||(24851302-24851334)
chr3 (39-99)||(52952532-52952592)
[»] chr1 (70 HSPs)
chr1 (13-149)||(46247954-46248090)
chr1 (16-136)||(23768334-23768454)
chr1 (13-149)||(34725099-34725233)
chr1 (13-149)||(18944664-18944803)
chr1 (13-149)||(32632558-32632693)
chr1 (13-149)||(10668246-10668384)
chr1 (13-149)||(35005144-35005282)
chr1 (53-149)||(4349699-4349795)
chr1 (13-149)||(14617059-14617195)
chr1 (13-149)||(27474302-27474437)
chr1 (16-147)||(46991828-46991959)
chr1 (16-149)||(20004091-20004226)
chr1 (16-149)||(30395727-30395862)
chr1 (13-149)||(27201668-27201806)
chr1 (16-138)||(6925124-6925246)
chr1 (13-139)||(18724557-18724682)
chr1 (13-149)||(38478283-38478417)
chr1 (13-149)||(41319807-41319943)
chr1 (26-147)||(45402128-45402251)
chr1 (39-149)||(35253188-35253296)
chr1 (44-149)||(1517312-1517418)
chr1 (13-138)||(45264411-45264537)
chr1 (13-146)||(45812541-45812672)
chr1 (13-149)||(47214532-47214666)
chr1 (39-158)||(31382206-31382324)
chr1 (39-149)||(23796512-23796622)
chr1 (47-96)||(4430080-4430129)
chr1 (13-149)||(6983812-6983946)
chr1 (55-149)||(18741958-18742054)
chr1 (39-141)||(19701617-19701720)
chr1 (13-128)||(25468285-25468400)
chr1 (13-138)||(2435798-2435924)
chr1 (57-147)||(10378738-10378828)
chr1 (39-85)||(17470411-17470457)
chr1 (49-148)||(19932755-19932856)
chr1 (44-149)||(8197095-8197200)
chr1 (13-149)||(19414460-19414594)
chr1 (13-138)||(35019251-35019375)
chr1 (13-149)||(9939482-9939621)
chr1 (39-95)||(34679274-34679330)
chr1 (55-138)||(46859129-46859213)
chr1 (39-130)||(11596560-11596650)
chr1 (39-137)||(12126850-12126946)
chr1 (58-149)||(43768205-43768296)
chr1 (39-130)||(44485129-44485220)
chr1 (60-130)||(15505632-15505702)
chr1 (39-136)||(43207542-43207640)
chr1 (26-148)||(22324927-22325049)
chr1 (13-138)||(35117777-35117905)
chr1 (15-147)||(39214961-39215094)
chr1 (13-133)||(18335305-18335425)
chr1 (13-93)||(24564365-24564445)
chr1 (56-149)||(42304208-42304303)
chr1 (13-148)||(15511150-15511288)
chr1 (43-149)||(20999851-20999957)
chr1 (26-144)||(30682848-30682963)
chr1 (40-100)||(27136701-27136762)
chr1 (13-85)||(52910238-52910311)
chr1 (17-85)||(50760291-50760359)
chr1 (13-96)||(31272429-31272511)
chr1 (39-104)||(19656151-19656217)
chr1 (39-100)||(33223031-33223092)
chr1 (87-149)||(50606498-50606560)
chr1 (13-78)||(22327120-22327185)
chr1 (13-138)||(23371145-23371268)
chr1 (39-100)||(34149010-34149071)
chr1 (13-100)||(20036241-20036329)
chr1 (39-83)||(20169156-20169200)
chr1 (56-100)||(21910699-21910743)
chr1 (41-69)||(25290214-25290242)
[»] chr7 (57 HSPs)
chr7 (13-152)||(11617586-11617725)
chr7 (14-149)||(2541020-2541155)
chr7 (15-149)||(23419675-23419809)
chr7 (14-158)||(19426882-19427025)
chr7 (16-158)||(7879639-7879781)
chr7 (13-149)||(21172010-21172144)
chr7 (13-149)||(31591110-31591244)
chr7 (13-149)||(32758259-32758393)
chr7 (16-149)||(42798670-42798803)
chr7 (14-149)||(27629633-27629768)
chr7 (13-146)||(33871914-33872046)
chr7 (13-149)||(42391101-42391235)
chr7 (16-149)||(42805525-42805660)
chr7 (16-149)||(47716460-47716595)
chr7 (13-149)||(10693074-10693208)
chr7 (13-130)||(28362165-28362282)
chr7 (16-148)||(35334818-35334948)
chr7 (40-149)||(35787270-35787378)
chr7 (13-158)||(43557470-43557618)
chr7 (13-149)||(19265813-19265947)
chr7 (13-149)||(34626209-34626344)
chr7 (16-135)||(42101899-42102019)
chr7 (46-149)||(22698968-22699074)
chr7 (39-149)||(42476897-42477005)
chr7 (13-100)||(48123534-48123621)
chr7 (39-149)||(48735123-48735231)
chr7 (43-149)||(14099008-14099113)
chr7 (43-149)||(14409025-14409130)
chr7 (14-148)||(18512455-18512588)
chr7 (13-149)||(29907417-29907552)
chr7 (39-149)||(40463901-40464010)
chr7 (39-155)||(16341302-16341419)
chr7 (13-149)||(18747484-18747621)
chr7 (13-85)||(7644954-7645026)
chr7 (19-138)||(21566439-21566559)
chr7 (39-131)||(38604551-38604642)
chr7 (16-100)||(46354195-46354281)
chr7 (26-103)||(2662982-2663057)
chr7 (52-149)||(23618978-23619075)
chr7 (19-149)||(8148947-8149077)
chr7 (26-129)||(19266461-19266564)
chr7 (71-149)||(27889317-27889395)
chr7 (13-138)||(47077867-47077990)
chr7 (43-100)||(1408485-1408542)
chr7 (13-82)||(35203437-35203506)
chr7 (16-149)||(38262197-38262330)
chr7 (39-145)||(25198749-25198856)
chr7 (39-85)||(5180222-5180268)
chr7 (13-158)||(11741793-11741936)
chr7 (115-149)||(45018924-45018958)
chr7 (13-85)||(12473302-12473374)
chr7 (13-60)||(1524276-1524323)
chr7 (43-138)||(23231585-23231680)
chr7 (13-95)||(6736888-6736969)
chr7 (115-149)||(36602547-36602581)
chr7 (13-97)||(32233188-32233271)
chr7 (58-135)||(33500556-33500635)
[»] chr8 (52 HSPs)
chr8 (16-149)||(36720797-36720930)
chr8 (16-149)||(28817627-28817760)
chr8 (39-151)||(45071289-45071400)
chr8 (16-145)||(29521690-29521819)
chr8 (39-148)||(29877118-29877227)
chr8 (16-149)||(44530150-44530283)
chr8 (14-149)||(2626518-2626656)
chr8 (13-149)||(39460995-39461133)
chr8 (13-151)||(22598155-22598292)
chr8 (39-149)||(35261703-35261813)
chr8 (39-149)||(12625913-12626024)
chr8 (39-149)||(13160726-13160835)
chr8 (13-149)||(12670251-12670385)
chr8 (16-149)||(26954133-26954269)
chr8 (16-149)||(6760823-6760958)
chr8 (14-149)||(17823575-17823710)
chr8 (13-146)||(18164764-18164896)
chr8 (13-149)||(30454098-30454232)
chr8 (26-138)||(5689642-5689754)
chr8 (26-138)||(8483950-8484062)
chr8 (26-149)||(5135291-5135413)
chr8 (39-149)||(10857852-10857963)
chr8 (39-149)||(8897765-8897875)
chr8 (39-158)||(20869947-20870068)
chr8 (13-99)||(14018019-14018106)
chr8 (41-149)||(16225045-16225155)
chr8 (26-149)||(7136528-7136653)
chr8 (13-144)||(20284075-20284210)
chr8 (39-130)||(24365079-24365171)
chr8 (16-149)||(25250523-25250658)
chr8 (13-149)||(31457171-31457306)
chr8 (13-144)||(21070703-21070839)
chr8 (13-137)||(44781517-44781643)
chr8 (50-147)||(44742521-44742619)
chr8 (14-138)||(389642-389768)
chr8 (42-137)||(17250888-17250985)
chr8 (41-101)||(23286374-23286432)
chr8 (49-138)||(40604918-40605006)
chr8 (39-100)||(43942348-43942411)
chr8 (13-99)||(35105921-35106008)
chr8 (87-149)||(28407475-28407537)
chr8 (13-82)||(11748297-11748366)
chr8 (13-85)||(20869563-20869633)
chr8 (76-149)||(26102578-26102651)
chr8 (72-149)||(16013511-16013590)
chr8 (57-137)||(19729382-19729462)
chr8 (13-76)||(30962847-30962910)
chr8 (39-149)||(23000229-23000329)
chr8 (115-149)||(27468093-27468127)
chr8 (13-90)||(36918122-36918199)
chr8 (115-151)||(27508010-27508046)
chr8 (13-100)||(42083748-42083836)
[»] chr2 (54 HSPs)
chr2 (16-149)||(8455317-8455450)
chr2 (26-149)||(9671192-9671313)
chr2 (13-141)||(32781298-32781425)
chr2 (13-149)||(10543696-10543834)
chr2 (13-149)||(10546160-10546297)
chr2 (16-149)||(11514437-11514569)
chr2 (16-149)||(14444730-14444862)
chr2 (13-149)||(14530316-14530454)
chr2 (39-149)||(40762235-40762345)
chr2 (39-149)||(36871517-36871625)
chr2 (50-149)||(25632544-25632643)
chr2 (13-149)||(21779262-21779396)
chr2 (13-149)||(23397764-23397898)
chr2 (13-100)||(12023969-12024055)
chr2 (13-104)||(23145744-23145835)
chr2 (13-104)||(23557534-23557625)
chr2 (13-149)||(24200624-24200762)
chr2 (16-158)||(25249730-25249871)
chr2 (39-149)||(30826061-30826169)
chr2 (16-149)||(17668003-17668136)
chr2 (14-149)||(19977715-19977850)
chr2 (39-149)||(14544087-14544200)
chr2 (39-138)||(31158451-31158552)
chr2 (39-147)||(4516354-4516462)
chr2 (39-149)||(17896283-17896394)
chr2 (13-100)||(21377123-21377210)
chr2 (39-149)||(25079718-25079829)
chr2 (39-149)||(39914307-39914417)
chr2 (13-134)||(99281-99400)
chr2 (39-149)||(17623588-17623698)
chr2 (55-149)||(44643563-44643657)
chr2 (40-149)||(27573646-27573754)
chr2 (16-149)||(40416872-40417005)
chr2 (13-100)||(5450283-5450371)
chr2 (13-146)||(7214532-7214667)
chr2 (13-147)||(45235820-45235955)
chr2 (13-131)||(44521392-44521510)
chr2 (39-149)||(5841052-5841164)
chr2 (13-82)||(19614990-19615059)
chr2 (17-100)||(22371059-22371139)
chr2 (14-90)||(12315712-12315787)
chr2 (13-69)||(29419970-29420026)
chr2 (13-138)||(26684632-26684759)
chr2 (55-137)||(24890451-24890533)
chr2 (13-130)||(33795283-33795400)
chr2 (64-149)||(13245096-13245181)
chr2 (39-138)||(17471572-17471673)
chr2 (13-100)||(31821393-31821478)
chr2 (116-152)||(40579747-40579783)
chr2 (39-82)||(15296475-15296518)
chr2 (71-138)||(24860000-24860067)
chr2 (115-149)||(8575995-8576029)
chr2 (115-149)||(22371212-22371246)
chr2 (16-85)||(17705496-17705565)
[»] scaffold0049 (1 HSPs)
scaffold0049 (13-149)||(58975-59113)
[»] chr6 (37 HSPs)
chr6 (13-149)||(29355856-29355994)
chr6 (13-149)||(12221915-12222054)
chr6 (13-149)||(1354758-1354892)
chr6 (13-149)||(9161121-9161258)
chr6 (13-149)||(1346962-1347096)
chr6 (13-149)||(32728158-32728293)
chr6 (13-143)||(3815084-3815214)
chr6 (15-149)||(18277194-18277328)
chr6 (13-103)||(20400665-20400755)
chr6 (13-137)||(7947384-7947509)
chr6 (36-100)||(1941876-1941940)
chr6 (13-149)||(2166411-2166549)
chr6 (13-149)||(2178044-2178182)
chr6 (39-149)||(26097184-26097292)
chr6 (39-149)||(25557749-25557857)
chr6 (39-85)||(6024257-6024303)
chr6 (13-137)||(23240837-23240959)
chr6 (26-103)||(33138844-33138921)
chr6 (13-85)||(12889424-12889496)
chr6 (13-149)||(24097579-24097711)
chr6 (13-83)||(8409241-8409311)
chr6 (71-149)||(12885967-12886047)
chr6 (48-89)||(24751135-24751176)
chr6 (26-143)||(32579437-32579553)
chr6 (73-149)||(383761-383837)
chr6 (15-128)||(14553511-14553626)
chr6 (13-104)||(13905026-13905116)
chr6 (13-149)||(17432338-17432482)
chr6 (15-100)||(28007628-28007711)
chr6 (13-137)||(15866052-15866174)
chr6 (72-149)||(23930128-23930205)
chr6 (69-158)||(3116121-3116212)
chr6 (39-74)||(9671161-9671196)
chr6 (78-149)||(13267788-13267859)
chr6 (116-158)||(6808496-6808538)
chr6 (117-149)||(12892111-12892143)
chr6 (39-90)||(13628316-13628368)
[»] chr5 (44 HSPs)
chr5 (16-159)||(24448891-24449034)
chr5 (13-149)||(38879579-38879717)
chr5 (40-149)||(16880648-16880757)
chr5 (13-149)||(32703422-32703556)
chr5 (13-149)||(28516434-28516571)
chr5 (16-149)||(41014320-41014452)
chr5 (13-136)||(27328750-27328875)
chr5 (16-149)||(4619105-4619240)
chr5 (14-149)||(8169985-8170118)
chr5 (13-149)||(43334200-43334338)
chr5 (39-149)||(7097761-7097870)
chr5 (42-149)||(13801768-13801877)
chr5 (13-149)||(35710311-35710445)
chr5 (21-137)||(19142956-19143071)
chr5 (46-138)||(43574637-43574729)
chr5 (39-149)||(29334419-29334530)
chr5 (39-146)||(30006349-30006456)
chr5 (39-147)||(7368422-7368528)
chr5 (39-149)||(20135628-20135740)
chr5 (13-149)||(22187283-22187421)
chr5 (39-150)||(12006328-12006441)
chr5 (75-149)||(16957374-16957448)
chr5 (39-127)||(2838803-2838890)
chr5 (61-149)||(34154815-34154903)
chr5 (13-85)||(42924899-42924971)
chr5 (13-92)||(34074620-34074699)
chr5 (16-104)||(1405188-1405276)
chr5 (90-146)||(39801591-39801647)
chr5 (40-99)||(36770806-36770864)
chr5 (49-100)||(41425982-41426033)
chr5 (15-100)||(208977-209062)
chr5 (49-130)||(22600488-22600569)
chr5 (39-100)||(22907915-22907975)
chr5 (115-156)||(29184055-29184096)
chr5 (13-69)||(22025541-22025597)
chr5 (13-80)||(37024626-37024691)
chr5 (39-130)||(24323725-24323816)
chr5 (39-130)||(24360349-24360440)
chr5 (117-151)||(19438768-19438802)
chr5 (51-149)||(31694109-31694207)
chr5 (57-138)||(9794390-9794471)
chr5 (39-100)||(24903746-24903807)
chr5 (88-149)||(25622533-25622594)
chr5 (116-149)||(32354228-32354261)
[»] chr4 (73 HSPs)
chr4 (39-149)||(20639659-20639770)
chr4 (13-151)||(6430625-6430762)
chr4 (13-147)||(17043398-17043531)
chr4 (39-149)||(14983858-14983968)
chr4 (39-149)||(25629073-25629183)
chr4 (16-149)||(5648260-5648392)
chr4 (16-149)||(16408602-16408737)
chr4 (13-149)||(44363131-44363269)
chr4 (14-149)||(47443956-47444091)
chr4 (16-147)||(21646965-21647098)
chr4 (36-138)||(51865050-51865152)
chr4 (13-149)||(47528531-47528665)
chr4 (13-149)||(48598826-48598960)
chr4 (13-149)||(30639378-30639513)
chr4 (16-152)||(40915830-40915965)
chr4 (41-149)||(23501813-23501923)
chr4 (13-149)||(9832314-9832448)
chr4 (13-149)||(11054149-11054283)
chr4 (13-138)||(19027846-19027971)
chr4 (13-149)||(20224982-20225116)
chr4 (13-148)||(29207900-29208033)
chr4 (13-149)||(35567168-35567304)
chr4 (54-149)||(30690177-30690272)
chr4 (13-136)||(37494849-37494972)
chr4 (13-149)||(5306661-5306800)
chr4 (47-149)||(12711450-12711553)
chr4 (39-149)||(20405110-20405223)
chr4 (39-149)||(16911586-16911698)
chr4 (39-150)||(7909280-7909391)
chr4 (26-150)||(8473620-8473744)
chr4 (39-150)||(21489111-21489223)
chr4 (13-141)||(25463120-25463247)
chr4 (39-149)||(54175088-54175199)
chr4 (39-138)||(9987846-9987945)
chr4 (58-149)||(55766467-55766558)
chr4 (58-149)||(55830722-55830813)
chr4 (43-149)||(13256400-13256508)
chr4 (47-104)||(17079697-17079754)
chr4 (39-99)||(39029111-39029172)
chr4 (13-85)||(7038051-7038122)
chr4 (13-137)||(41018807-41018930)
chr4 (13-104)||(7385522-7385613)
chr4 (39-129)||(49796822-49796911)
chr4 (13-147)||(54967019-54967151)
chr4 (13-97)||(487187-487272)
chr4 (60-149)||(20225119-20225210)
chr4 (54-149)||(20908637-20908733)
chr4 (17-85)||(25343189-25343257)
chr4 (46-99)||(48327814-48327869)
chr4 (13-146)||(39077800-39077931)
chr4 (13-100)||(47441580-47441667)
chr4 (13-132)||(49938611-49938727)
chr4 (39-99)||(14590861-14590922)
chr4 (71-149)||(30352581-30352661)
chr4 (88-149)||(38755909-38755970)
chr4 (26-100)||(30581515-30581591)
chr4 (115-158)||(35532092-35532135)
chr4 (59-149)||(2813169-2813262)
chr4 (115-149)||(11394952-11394986)
chr4 (115-149)||(11404679-11404713)
chr4 (43-77)||(23580281-23580315)
chr4 (13-98)||(30496374-30496457)
chr4 (79-149)||(38786673-38786743)
chr4 (115-149)||(40553938-40553972)
chr4 (39-85)||(51420598-51420644)
chr4 (88-149)||(33836488-33836549)
chr4 (26-149)||(10277758-10277879)
chr4 (57-134)||(16494259-16494338)
chr4 (17-149)||(32478793-32478918)
chr4 (117-149)||(32484335-32484367)
chr4 (49-100)||(35894511-35894563)
chr4 (89-149)||(44718641-44718701)
chr4 (117-149)||(56323002-56323034)
[»] scaffold0057 (4 HSPs)
scaffold0057 (40-158)||(24764-24882)
scaffold0057 (39-149)||(46855-46965)
scaffold0057 (39-137)||(43683-43780)
scaffold0057 (87-147)||(46710-46770)
[»] scaffold0258 (1 HSPs)
scaffold0258 (13-149)||(13025-13160)
[»] scaffold0168 (1 HSPs)
scaffold0168 (13-149)||(30577-30711)
[»] scaffold0015 (1 HSPs)
scaffold0015 (26-149)||(48635-48756)
[»] scaffold0311 (1 HSPs)
scaffold0311 (39-137)||(10834-10932)
[»] scaffold0018 (1 HSPs)
scaffold0018 (46-149)||(72868-72971)
[»] scaffold0223 (1 HSPs)
scaffold0223 (13-149)||(11129-11263)
[»] scaffold0187 (2 HSPs)
scaffold0187 (13-148)||(10052-10185)
scaffold0187 (13-148)||(20380-20513)
[»] scaffold1176 (1 HSPs)
scaffold1176 (13-146)||(1591-1722)
[»] scaffold0036 (1 HSPs)
scaffold0036 (16-104)||(35063-35152)
[»] scaffold0167 (1 HSPs)
scaffold0167 (26-130)||(23610-23714)
[»] scaffold0180 (1 HSPs)
scaffold0180 (63-149)||(24134-24220)
[»] scaffold0028 (1 HSPs)
scaffold0028 (45-105)||(32960-33021)
[»] scaffold0005 (1 HSPs)
scaffold0005 (39-99)||(226456-226517)
[»] scaffold0254 (1 HSPs)
scaffold0254 (13-85)||(4155-4227)
[»] scaffold0954 (1 HSPs)
scaffold0954 (43-138)||(3572-3667)
[»] scaffold0194 (1 HSPs)
scaffold0194 (63-159)||(24696-24792)


Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 7 - 256
Target Start/End: Original strand, 33235545 - 33235793
Alignment:
Q  7 gtgagatgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaatggtgggaccctttcg 105  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||    
T  33235545 gtgacatgaaaggtcacaagttcaaatcgtgtaaagagcctcttgtgtaaaaaaacagggtaagactgtgtacaatacactaaatggtgggacccct-cg 33235643  T
Q  106 cagcccttacgtatgcgggagctttagtgcaccaggttgcccttattgtttttagttcatttattggaaattaatttgaaatttgaacaggagctaagaa 205  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33235644 cagaccttacgtatgcggaagctttagtgcaccaggttgcccttattgtttttagttcatttattggaaattaa-ttgaaatttgaacaggagctaagaa 33235742  T
Q  206 agtggacgtggacttgaagcagcagaaagtaacagtgagtggatatgttga 256  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  33235743 agtggatgtggacttgaagcagcagaaagtaacggtgagtggatatgttga 33235793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 12914171 - 12914036
Alignment:
Q  14 gaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccctt 113  Q
    |||||||||||||||||| || || ||||||||||||||||||||||||||||||| | ||||||||||||| |||||||| ||||| ||| ||| || |    
T  12914171 gaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggcgtacaatacaccaaatggtgagaccccttcccagaccct 12914072  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | ||||||||||||| | |||||| ||||||||||    
T  12914071 gcatatgcgggagcttcaatgcaccgggttgccctt 12914036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 40272936 - 40272813
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcggga 125  Q
    |||||| || || ||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| | | || | |||||||||||    
T  40272936 gttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcggga 40272837  T
Q  126 gctttagtgcaccaggttgccctt 149  Q
    ||||||||||||| ||||||||||    
T  40272836 gctttagtgcaccgggttgccctt 40272813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 6411945 - 6411834
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcggga 125  Q
    |||||| || |||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| ||| ||| |||| |||||||||||    
T  6411945 gttcaagtcttgtaaacagcctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaaatgatgggaccccttcccagaccttgcgtatgcggga 6411847  T
Q  126 gctttagtgcacc 138  Q
    |||||||||||||    
T  6411846 gctttagtgcacc 6411834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 22609799 - 22609922
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcggga 125  Q
    |||||| || || |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||| | | |||| |||||||||||    
T  22609799 gttcaagtcttggaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccttgcgtatgcggga 22609897  T
Q  126 gctttagtgcaccaggttgccctta 150  Q
    |||| |||||||| |||||||||||    
T  22609898 gcttcagtgcaccgggttgccctta 22609922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 13628929 - 13628791
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| || || |||||||||||||||||| |||||||||||| ||||||||||||||| |  ||||||||||||| ||| | | |    
T  13628929 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggac 13628830  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||||||||||||||| ||||||||||    
T  13628829 cctgcgtatgcgggagctttagtgcaccgggttgccctt 13628791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 39203536 - 39203670
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||| |||||| || |  ||||||||||||||||||||  |||||||||  |||||||||||||| |||||||||||||| ||| | | |||    
T  39203536 tgaaaggtcacaggttcaagtccttgaaacagcctcttgtgtaaaa--cagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggacct 39203633  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||||||||||||| ||||||||||    
T  39203634 tgcatatgcgggagctttagtgcaccgggttgccctt 39203670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 26869727 - 26869862
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||| |||||| || || ||||||||||| |||||||| |||||||||| ||||||||||||||| |||||||||||||| ||  | | ||     
T  26869727 tgaaaggtcacaggttcaagtcctggaaacagcctctggtgtaaaa-acagggtaaggctgcgtacaatacaccaaatggtgggaccccttgccggacca 26869825  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | |||||||||||||||| ||||||| ||||||||||    
T  26869826 tgcgtatgcgggagctttggtgcaccgggttgccctt 26869862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 31904968 - 31904856
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtggga-ccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||||||| || |||||||||||||||| ||||||||||||||||| ||||||||||| ||| ||| |||  ||||||| |||||||||||||||||||    
T  31904968 aaacagcctattatgtaaaaaacagggtatgactgcgtacaatacaccaaatggtgggacccccttcccagatcttacgtgtgcgggagctttagtgcac 31904869  T
Q  138 caggttgccctta 150  Q
    |||| ||||||||    
T  31904868 caggctgccctta 31904856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 148
Target Start/End: Original strand, 26573147 - 26573282
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || |||||||||| |||||||||||||||||||| ||||||||||||||| || |||||||||||  || | | ||     
T  26573147 tgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaaggctgcgtacaatacaccaattggtgggaccccatcccggaccc 26573246  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccct 148  Q
    | |||||||| |||||||||||||||||| ||||||    
T  26573247 tgcgtatgcgtgagctttagtgcaccaggctgccct 26573282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 54484736 - 54484847
Alignment:
Q  39 aaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    |||||||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||| ||| | | || | |||||||||||||||||||||||    
T  54484736 aaacagcctcttgtgtaaaaaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 54484835  T
Q  138 caggttgccctt 149  Q
    | ||||||||||    
T  54484836 cgggttgccctt 54484847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 14986990 - 14987115
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcccttacgtatgcgg 123  Q
    |||||| || || ||||||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||| ||| | | |||| | |||||||    
T  14986990 gttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcgg 14987089  T
Q  124 gagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||| |||| |||||    
T  14987090 gagctttagtgcaccgggtttccctt 14987115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 34420781 - 34420656
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagccc 111  Q
    |||||||||||  |||||| || || ||||||||||||||||||||||||||||||| |||||||| ||||| | |||||||||||||| ||| | | ||    
T  34420781 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtaccatacaccaaaatggtgggaccccttcccggacc 34420682  T
Q  112 ttacgtatgcgggagctttagtgcac 137  Q
    || |||||| ||||||||||||||||    
T  34420681 ttgcgtatgtgggagctttagtgcac 34420656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 10795549 - 10795424
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcccttacgtatgcgg 123  Q
    |||||| || || |||||||||||||||||||| |||||||||| |||||||||||||||   |||||||||||||| |||   | || | |||||||||    
T  10795549 gttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgg 10795450  T
Q  124 gagctttagtgcaccaggttgccctt 149  Q
    |||||| |||||||||||||||||||    
T  10795449 gagcttcagtgcaccaggttgccctt 10795424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 46421172 - 46421035
Alignment:
Q  15 aaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagccct 112  Q
    |||||||||  |||||| || || ||||||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||| ||| | | ||     
T  46421172 aaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccc 46421073  T
Q  113 tacgtatgcgggagcttt-agtgcaccaggttgccctt 149  Q
    | |||||||||||||||| |||||||| | ||||||||    
T  46421072 tgcgtatgcgggagctttaagtgcaccggtttgccctt 46421035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 516429 - 516568
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaata---cactaaatggtgggaccctttcgcagc 109  Q
    |||||||||||  |||||| || || ||||||||||||||||||||||||||||||| ||||| ||||||   ||  |||||| ||||||| ||| | |     
T  516429 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgcacaataaaccaaaaaatggcgggaccccttccccga 516528  T
Q  110 ccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    || | |||||||||||||||||||||||| ||||||||||    
T  516529 ccctgcgtatgcgggagctttagtgcaccgggttgccctt 516568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 1217110 - 1217244
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||| ||||||| ||| | | ||     
T  1217110 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggcgggaccccttcccggaccc 1217207  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  1217208 tgcatatgcgggagctctagtgcaccgggttgccctt 1217244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 29366857 - 29366721
Alignment:
Q  15 aaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagccct 112  Q
    |||||||||  |||||| || || |||||||||||||| |||||||||||||||| ||||||||||||||| |  ||||||||||||| ||| | | ||     
T  29366857 aaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccc 29366758  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | |||||| ||||||||||||||||  ||||||||||    
T  29366757 tgcgtatgtgggagctttagtgcactgggttgccctt 29366721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 45786327 - 45786215
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgca 136  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||   |||||||||||||| ||| | | || | || |||| ||||||||||||||    
T  45786327 aaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagctttagtgca 45786228  T
Q  137 ccaggttgccctt 149  Q
    || ||||||||||    
T  45786227 ccgggttgccctt 45786215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 53996703 - 53996566
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagccc 111  Q
    |||||||||||  |||||| ||||| ||||| ||||||||||||||||||||||||| |||| ||||||||| | |||||||||||||| ||| | | |     
T  53996703 tgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggctgcttacaatacaccaaaatggtgggaccccttccctgaca 53996604  T
Q  112 ttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | |||||| ||||||||||||||||| || |||||||    
T  53996603 ctgcgtatgtgggagctttagtgcaccgggctgccctt 53996566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 55401209 - 55401314
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagcccttacgtatgcggg 124  Q
    |||||| || ||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||||||||||| ||| | | |||| ||||||||||    
T  55401209 gttcaagtcctgtaaacagcctcttgtgtaaaaaacaggttaagactgcgtataatacaccaaaatggtgggaccccttctcggaccttccgtatgcggg 55401308  T
Q  125 agcttt 130  Q
    ||||||    
T  55401309 agcttt 55401314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 7943036 - 7943143
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtggga-ccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||| ||| || | |||||||||||||||||||||||    
T  7943036 aaacagcatcttgtctaaaaaacagggtaagactgcgtacaatacatcaaatggtgggatccctttc-cagaccatgcgtatgcgggagctttagtgcac 7943134  T
Q  138 caggttgcc 146  Q
      |||||||    
T  7943135 tgggttgcc 7943143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 13730738 - 13730603
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagccctt 113  Q
    ||||||||  |||||| || || ||||||||||||||||||||||||||||||| ||| ||||||||||| |  ||||||||||||| ||| | | ||      
T  13730738 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggacccc 13730639  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | |||||||||||||||||||||| ||||||||||    
T  13730638 gcatatgcgggagctttagtgcaccgggttgccctt 13730603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 45948972 - 45948850
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || ||||| |||||||||||||||| |||||||| |||| |||||||||| || ||||||||||| ||| | | || | |    
T  45948972 aaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaatagggtaaggctgcatacaatacaccaattggtgggaccccttctcggaccctgc 45948873  T
Q  116 gtatgcgggagctttagtgcacc 138  Q
    |||||||||||||||||||||||    
T  45948872 gtatgcgggagctttagtgcacc 45948850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 54374483 - 54374349
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagccc 111  Q
    |||||||||||| |||||| || || ||||| |||||||||||||||| |||||||| ||||||||||| || | |||||||||||||| ||| | | ||    
T  54374483 tgaaaggtcacaggttcaagtcttggaaacaacctcttgtgtaaaaaatagggtaaggctgcgtacaatccaccaaaatggtgggaccccttcccggacc 54374384  T
Q  112 ttacgtatgcgggagctttagtgcaccaggttgcc 146  Q
     | | ||||||||||||||||| ||||||| ||||    
T  54374383 ctgcatatgcgggagctttagttcaccaggctgcc 54374349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 49013586 - 49013474
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgca 136  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||| ||| | | ||   | || |||||||||||||||||    
T  49013586 aaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggagctttagtgca 49013487  T
Q  137 ccaggttgccctt 149  Q
    || ||||||||||    
T  49013486 ccgggttgccctt 49013474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 22123052 - 22122915
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||||| |  |||||| || || |||||| |||||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | ||     
T  22123052 tgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc 22122955  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgcccttatt 152  Q
    | | |||||| ||||| ||||||||| |||||||||||||    
T  22122954 tgcatatgcgagagctctagtgcaccgggttgcccttatt 22122915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 31592882 - 31593003
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcggga 125  Q
    |||||| || || ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||| | ||| | | || | | |||||||||    
T  31592882 gttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggactccttcccggaccctgcatatgcggga 31592979  T
Q  126 gctttagtgcaccaggttgccctt 149  Q
    ||| ||||||||| ||||||||||    
T  31592980 gctctagtgcaccgggttgccctt 31593003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 148
Target Start/End: Complemental strand, 8247826 - 8247688
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| || || |||||||||||||||||||||||||||||||  |||||||||||||| |  ||||||||||| | ||| | | |    
T  8247826 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgggactccttcccggac 8247727  T
Q  111 cttacgtatgcgggagcttt-agtgcaccaggttgccct 148  Q
    | | |||||||||||||||| |||||||  |||||||||    
T  8247726 cctgcgtatgcgggagctttaagtgcactgggttgccct 8247688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 4495798 - 4495713
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccct 101  Q
    ||||||||  |||||| || || ||| ||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  4495798 aaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccct 4495713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 9276313 - 9276401
Alignment:
Q  42 cagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagcttta 131  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||| | | || | ||||||||||| |||||    
T  9276313 cagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggt-ggaccctttcccggaccctgcgtatgcgggaacttta 9276401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 149
Target Start/End: Original strand, 15797271 - 15797376
Alignment:
Q  42 cagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccagg 141  Q
    |||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | || | | |||| ||||||| ||||||||| ||    
T  15797271 cagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccggg 15797368  T
Q  142 ttgccctt 149  Q
    ||||||||    
T  15797369 ttgccctt 15797376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 31672739 - 31672851
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccct-ttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||||||| || ||||||||||| || |||| |||||||||||||| |||||||||||| || ||| ||   ||||||| |||||||||||||||||||    
T  31672739 aaacagcctattatgtaaaaaacaaggcaagagtgcgtacaatacaccaaatggtgggactctcttcccatatcttacgtgtgcgggagctttagtgcac 31672838  T
Q  138 caggttgccctta 150  Q
    |||| || |||||    
T  31672839 caggctgtcctta 31672851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 47624088 - 47624148
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||    
T  47624088 aaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaatggtgggaccc 47624148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 54032693 - 54032608
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccct 101  Q
    ||||||||  |||||| || || ||||| ||||||||||||||||||||||||| |||| ||||||||||  ||||||||||||||    
T  54032693 aaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccgaatggtgggaccct 54032608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 148
Target Start/End: Complemental strand, 353450 - 353351
Alignment:
Q  51 gtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccct 148  Q
    ||||||||||||||||||| ||||||||||||||| |  ||||||||||||| ||| | | ||   | |||||||||||||||||||||| |||||||||    
T  353450 gtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccct 353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 34771457 - 34771365
Alignment:
Q  57 aaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||| | | || | | |||||||||||| ||||||||| || |||||||    
T  34771457 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggctgccctt 34771365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 138
Target Start/End: Original strand, 19731052 - 19731147
Alignment:
Q  43 agcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||||||||||||||||| ||||||  ||||||||||||||  | ||||||||||||||| ||| |  |  |||||| ||||||||||||||||    
T  19731052 agcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacacctattggtgggaccctttcccagactctgtgtatgcaggagctttagtgcacc 19731147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 25517282 - 25517171
Alignment:
Q  39 aaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||| |||||||||||||||| || | || | ||||||||||||||| |||||||||||||| ||| | |  | | ||||||| |||||||||||||||    
T  25517282 aaacatcctcttgtgtaaaaaaacaagatatggctgcgtacaatacacaaaatggtgggaccccttcccggatcctgcgtatgctggagctttagtgcac 25517183  T
Q  138 caggttgccctt 149  Q
    | ||||||||||    
T  25517182 cgggttgccctt 25517171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 16735487 - 16735596
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||||||||||||  |||| |||||||||| ||||||||||||||| |||||||||||||| ||| | | |  | ||||||||| ||||| |||||||     
T  16735487 aaacagcctcttgtagaaaa-acagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggacactgcgtatgcggtagcttcagtgcact 16735585  T
Q  139 aggttgccctt 149  Q
     ||||||||||    
T  16735586 gggttgccctt 16735596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 24578007 - 24578081
Alignment:
Q  75 gtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||||| ||||| ||| || ||| ||||||||| || ||||||||| ||||||||||    
T  24578007 gtacaatacactaaatggtgggactctttcccagaccctacatatgcgggaactctagtgcaccgggttgccctt 24578081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 25944489 - 25944626
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaa-tggtgggaccctttcgcagccc 111  Q
    ||||||||||   |||||| || || |||| |||||| ||||||||||| ||| ||| ||| ||||||||||| ||| ||||||||||| ||| | | ||    
T  25944489 tgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaactgggcaaggctgagtacaatacaccaaaatggtgggaccccttccctgacc 25944588  T
Q  112 ttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | |||||| ||||||||||| |||||||| |||||||    
T  25944589 ctgcgtatgtgggagctttagcgcaccaggctgccctt 25944626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 136
Target Start/End: Complemental strand, 43114995 - 43114882
Alignment:
Q  25 agttcaaatcgtgtaaacagcctcttgtgtaa-aaaacagggtaa-gactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcg 122  Q
    ||||||| || || |||||||||||||||||| |||||||||||| | || | |||||||||| |||||||||||||||| |    ||| | ||||||||    
T  43114995 agttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaagggctacctacaatacaccaaatggtgggacccttcctggacccctgcgtatgcg 43114896  T
Q  123 ggagctttagtgca 136  Q
    ||||||||||||||    
T  43114895 ggagctttagtgca 43114882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 45620966 - 45620881
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaatggtggga 97  Q
    |||||||||||  |||||| |  || |||||||||||||||||||||| ||||||||| ||||||||||||||| || ||||||||    
T  45620966 tgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaattggtggga 45620881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 52926304 - 52926220
Alignment:
Q  65 gtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||| ||||||||||||||| |||||||||||| | ||| | | || | |||||||||||||||||| ||||| ||||||||||    
T  52926304 gtaaggctgcgtacaatacaccaaatggtgggacaccttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctt 52926220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 5173857 - 5173720
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaa--tggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| || || ||||| ||||||||||||||| ||  |||||  ||| | |||||||| |||  ||||||| ||| ||| | | |    
T  5173857 tgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa-caaagtaaggttgcatgcaatacaccaaaaatggtggggccccttcccggac 5173759  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||| |||||||||||||||||||||||| ||||||||||    
T  5173758 cttgcgtatgcgggagctttagtgcaccgggttgccctt 5173720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 9607223 - 9607345
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcc 110  Q
    ||||||||||   |||||| || || ||||||||||||| ||||||||||||||||| ||||||| ||||||| |  |||| |||||||| ||| ||| |    
T  9607223 tgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtagaatacaccaataatgttgggaccccttcccagac 9607322  T
Q  111 cttacgtatgcgggagctttagt 133  Q
    |   | |||||||||||||||||    
T  9607323 cccgcatatgcgggagctttagt 9607345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 138
Target Start/End: Original strand, 19751628 - 19751723
Alignment:
Q  43 agcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||||||||||||||| || ||||||  ||||||||||||||  | ||||||||||||||| ||| | ||  ||||||  |||||||||||||||    
T  19751628 agcctcttgtgtaaaaatcaaggtaaggttgcgtacaatacacctattggtgggaccctttcccagactttgtgtatgcatgagctttagtgcacc 19751723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 45139615 - 45139479
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| |  || ||||| |||||||||||||| |||||||||| |||| ||||||||||   |||||||||||||| ||| ||| |    
T  45139615 tgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcccagac 45139516  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | ||||||||||| |||| ||||||| || |||||||    
T  45139515 c-tgcgtatgcgggaacttt-gtgcaccgggctgccctt 45139479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 52428585 - 52428527
Alignment:
Q  42 cagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    ||||||||||||||||| |||||||||| ||||||||||||||| |||| |||| ||||    
T  52428585 cagcctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaaatagtggaaccc 52428527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 35417940 - 35417988
Alignment:
Q  17 aggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacaggg 65  Q
    ||||||| |||||||||| || |||||||||||||||||||||||||||    
T  35417940 aggtcacgagttcaaatcctggaaacagcctcttgtgtaaaaaacaggg 35417988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 138
Target Start/End: Complemental strand, 44403663 - 44403567
Alignment:
Q  43 agcctcttgtgtaaaaaacagggtaagactgcgtacaatac-actaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||||||||||||| ||| |||||| ||||| | ||||| || |||||||||||||| ||| | | || ||||||||| | ||||||||||||||    
T  44403663 agcctcttgtgtaaaagacaaggtaaggctgcggagaataccacaaaatggtgggaccccttcccggaccctacgtatgctgaagctttagtgcacc 44403567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 30928284 - 30928197
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    |||||||||||  |||||| || || |||||||||||||||||||||||| ||||||  || ||| ||||||| || ||| |||||||    
T  30928284 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgtgtaaaatacaccaattggcgggaccc 30928197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 31922878 - 31922839
Alignment:
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctta 150  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  31922878 cttacgtatgcgggagctttagtgcaccaggctgccctta 31922839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 7697020 - 7696945
Alignment:
Q  15 aaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatgg 92  Q
    |||||||||  |||||| || || |||||| |||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  7697020 aaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatgg 7696945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 12525427 - 12525489
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcg 75  Q
    |||||||||||| |||| | || || ||||||||||||||||||||| ||||||||| |||||    
T  12525427 tgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggtaaggctgcg 12525489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 24577917 - 24577991
Alignment:
Q  75 gtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||||||||||| |||||| ||| || | | ||| |||||||| ||||||||| | ||||||||    
T  24577917 gtacaatacactaaatggtgggatcctttcccagaccctgcatatacgggagctctagtgcaccggattgccctt 24577991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 21875046 - 21875111
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgt-aaaaaacagggtaagactgcgtacaatacactaaat 90  Q
    ||||||||  || ||||| |||||||||| |||||| |||||||| ||||||||||||||||||||    
T  21875046 gttcaaattctggaaacaacctcttgtgttaaaaaagagggtaaggctgcgtacaatacactaaat 21875111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 10870088 - 10870025
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgta 77  Q
    |||||||||||  |||||| || || ||||||||||||||||| ||||||||||||| |||||||    
T  10870088 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta-aaaacagggtaaggctgcgta 10870025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 33926103 - 33926190
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta-aatggtgggaccc 100  Q
    ||||||||||   |||||| || || ||| |||||||||||||||| |||||||||| ||| ||||||||||| | |||||||||||||    
T  33926103 tgaaaggtcatgggttcaagtcctggaaatagcctcttgtgtaaaa-acagggtaaggctgtgtacaatacaccataatggtgggaccc 33926190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 39212042 - 39212081
Alignment:
Q  45 cctcttgtgtaaaaaacagggtaagactgcgtacaataca 84  Q
    ||||||||||||| |||| |||||||||||||||||||||    
T  39212042 cctcttgtgtaaataacaaggtaagactgcgtacaataca 39212081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 47624221 - 47624264
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgcccttattgttttt 158  Q
    |||||||||||||||||||||||| |||||||||| || |||||    
T  47624221 cgtatgcgggagctttagtgcaccgggttgcccttttttttttt 47624264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 149
Target Start/End: Complemental strand, 4495711 - 4495677
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||||| ||||||||||    
T  4495711 cgtatgcgggagctttagtgcaccgggttgccctt 4495677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 149
Target Start/End: Complemental strand, 10484651 - 10484617
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||||| ||||||||||    
T  10484651 cgtatgcgggagctttagtgcaccgggttgccctt 10484617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 149
Target Start/End: Original strand, 40390363 - 40390397
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||||| ||||||||||    
T  40390363 cgtatgcgggagctttagtgcaccgggttgccctt 40390397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 149
Target Start/End: Complemental strand, 54032606 - 54032572
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||||| ||||||||||    
T  54032606 cgtatgcgggagctttagtgcaccgggttgccctt 54032572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 8410966 - 8410918
Alignment:
Q  51 gtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggacc 99  Q
    ||||||||||||||||||| ||||  ||||||||| || ||||||||||    
T  8410966 gtgtaaaaaacagggtaaggctgctcacaatacaccaactggtgggacc 8410918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Complemental strand, 24851334 - 24851302
Alignment:
Q  117 tatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||| ||||||||||    
T  24851334 tatgcgggagctttagtgcaccgggttgccctt 24851302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 52952532 - 52952592
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggacc 99  Q
    ||||| |||||| ||||||||| | | |||||||| ||||||||||| |||| ||||||||    
T  52952532 aaacaacctcttatgtaaaaaatatgataagactgtgtacaatacaccaaatagtgggacc 52952592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 8e-36; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 46248090 - 46247954
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||| |||||  |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| | | ||     
T  46248090 tgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcccggaccc 46247991  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | |||||||||||||||||||| ||| ||||||||||    
T  46247990 tgcgtatgcgggagctttagtgtaccgggttgccctt 46247954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 23768454 - 23768334
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||| |||||| || || ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| | ||| ||| || | |    
T  23768454 aaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggacaccttcccagaccctgc 23768355  T
Q  116 gtatgcgggagctttagtgca 136  Q
    |||||||||||||||||||||    
T  23768354 gtatgcgggagctttagtgca 23768334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 34725233 - 34725099
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| ||| | | ||     
T  34725233 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacactaaatggtgggaccccttcccggaccc 34725136  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  34725135 tgcatatgcgggagctctagtgcaccgggttgccctt 34725099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 18944664 - 18944803
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcc 110  Q
    |||||||||||| ||||||  | || ||||||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||| ||| | | |    
T  18944664 tgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaacaatggtgggaccccttcccggac 18944763  T
Q  111 cttacgtatgcgggagc-tttagtgcaccaggttgccctt 149  Q
    | | ||||||||||||| ||||||||||| ||||||||||    
T  18944764 cctgcgtatgcgggagcttttagtgcaccgggttgccctt 18944803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 32632693 - 32632558
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||| ||| ||  ||     
T  32632693 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccaaaccc 32632595  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | ||||||||||||| ||||||||||||| |||||    
T  32632594 tgcatatgcgggagcttgagtgcaccaggtttccctt 32632558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 10668246 - 10668384
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| || || |||||||||||||||||||||||| ||||||  |||||||||||||| |  ||||||||||||| ||| | | |    
T  10668246 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggtc 10668345  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||||||||||||||| ||||||||||    
T  10668346 cctgcgtatgcgggagctttagtgcaccgggttgccctt 10668384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 35005144 - 35005282
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| || || ||||||||||||||||||||||||||||||| |||| ||||||||||   |||||||||||||| ||| | | |    
T  35005144 tgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcccggac 35005243  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||| ||||||||||||| ||||||||||    
T  35005244 cctgcgtatgcgggcgctttagtgcaccgggttgccctt 35005282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 4349699 - 4349795
Alignment:
Q  53 gtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||| ||| | | || | |||||||||||||||||||||||| ||||||||||    
T  4349699 gtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctt 4349795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 14617059 - 14617195
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||||||| ||||||| || || ||||||||||||||||||| |||| ||||||  |||||||||||||| ||||||||||| || ||| | | ||     
T  14617059 tgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggtaaggttgcgtacaatacaccaaatggtgggatcccttcccggaccc 14617158  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||||||||||||| |||| |||||    
T  14617159 tgcatatgcgggagctttagtgcaccgggttaccctt 14617195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 27474302 - 27474437
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||| |||||| || || |||||| |||||||||||||| ||||| ||  |||||||||||||||| ||||||||||||| ||| | | ||     
T  27474302 tgaaaggtcacaggttcaagtcttggaaacagtctcttgtgtaaaaa-cagggcaaagctgcgtacaatacactgaatggtgggaccccttcccggaccc 27474400  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | |||||||||||||||||||||||| | ||||||||    
T  27474401 tgcgtatgcgggagctttagtgcaccggattgccctt 27474437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 46991828 - 46991959
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || ||||| ||||||||||||||||||||||||| ||| |||||||||||  ||||||||||||| ||| | | || | |    
T  46991828 aaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccgaatggtgggaccccttcccggaccctgc 46991927  T
Q  116 gtatgcgggagctttagtgcaccaggttgccc 147  Q
    ||||| ||||||||||||||||| ||||||||    
T  46991928 gtatgtgggagctttagtgcaccgggttgccc 46991959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 20004226 - 20004091
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagccctt 113  Q
    ||||||||  |||||| || || ||||||||||| |||||||||||| |||||| ||||||||||||||| |  ||||||||||||| ||| ||| ||      
T  20004226 aaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagacccc 20004127  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | |||||||||||||||||||||| ||||||||||    
T  20004126 gcatatgcgggagctttagtgcaccgggttgccctt 20004091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 30395862 - 30395727
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagccctt 113  Q
    ||||||||  |||||| || || ||||||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||| ||| | | ||      
T  30395862 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggacccc 30395763  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | ||||||||||||||||||||||  |||||||||    
T  30395762 gcatatgcgggagctttagtgcaccgagttgccctt 30395727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 27201668 - 27201806
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcc 110  Q
    ||||||||||   |||||| || || |||||||||||||||| | |||||||||||| |||||||||||||||   |||||||||||||| ||| | | |    
T  27201668 tgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggac 27201767  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||| ||||||||||||||||||||||   ||||||||||    
T  27201768 cttgcgtatgcgggagctttagtgcattgggttgccctt 27201806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 6925124 - 6925246
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || ||| |||||||||||||||||| |||||||| ||||| |||||||||  ||||||||||||| ||| | | || | |    
T  6925124 aaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaatagggtaaggctgcggacaatacaccgaatggtgggaccccttcccggtccctgc 6925223  T
Q  116 gtatgcgggagctttagtgcacc 138  Q
    |||||||||||||||||||||||    
T  6925224 gtatgcgggagctttagtgcacc 6925246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 18724682 - 18724557
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||  |||||||| ||| | | ||     
T  18724682 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaaatcttgggaccccttcccggaccc 18724583  T
Q  113 tacgtatgcgggagctttagtgcacca 139  Q
    ||| |||||||||||||| ||||||||    
T  18724582 tacatatgcgggagcttt-gtgcacca 18724557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 38478417 - 38478283
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || |  ||||||||||||||||||||  ||||||||| ||||||||||||||| ||||||||| |||| ||| | | ||     
T  38478417 tgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtggaaccccttctcggaccc 38478320  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  38478319 tgcatatgcgggagctctagtgcaccgggttgccctt 38478283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 41319943 - 41319807
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgc-agccc 111  Q
    |||||||||||| ||| || || || |||||| |||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| ||| | | |||    
T  41319943 tgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatgatgggaccccttcccgaaccc 41319844  T
Q  112 ttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    || | |||||||||| || |||||||  ||||||||||    
T  41319843 tt-catatgcgggagtttcagtgcactgggttgccctt 41319807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 45402128 - 45402251
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggt--aaga-ctgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcg 122  Q
    |||||| || || ||||||||||||||||||||| ||||||  |||  ||||||||||||||| |||||||||||||| ||| ||| || | ||||||||    
T  45402128 gttcaagtcctggaaacagcctcttgtgtaaaaa-cagggttcaagttctgcgtacaatacaccaaatggtgggaccccttcccagaccctgcgtatgcg 45402226  T
Q  123 ggagctttagtgcaccaggttgccc 147  Q
    |||||||||||||||| ||||||||    
T  45402227 ggagctttagtgcaccgggttgccc 45402251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 35253296 - 35253188
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | || | | |||||||||||| |||||||||    
T  35253296 aaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcacc 35253199  T
Q  139 aggttgccctt 149  Q
     | ||||||||    
T  35253198 ggattgccctt 35253188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 149
Target Start/End: Complemental strand, 1517418 - 1517312
Alignment:
Q  44 gcctcttgtgt-aaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggt 142  Q
    ||||||||||| |||||||| | |||| ||||||||||||||| || ||||||||||| ||| ||| || | ||||||| |||||||||||||||| |||    
T  1517418 gcctcttgtgttaaaaaacatgataaggctgcgtacaatacaccaattggtgggaccccttctcagaccctgcgtatgcaggagctttagtgcaccgggt 1517319  T
Q  143 tgccctt 149  Q
    |||||||    
T  1517318 tgccctt 1517312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 45264537 - 45264411
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagccc 111  Q
    |||||||||||| |||||| || || ||||| ||||||||| ||||||||| ||||| ||| || ||||||| | |||||||||||||| ||| ||| ||    
T  45264537 tgaaaggtcacatgttcaagtcctggaaacaacctcttgtgcaaaaaacagagtaaggctgtgtgcaatacaccaaaatggtgggaccccttctcagacc 45264438  T
Q  112 ttacgtatgcgggagctttagtgcacc 138  Q
     | | ||||||||||||||||||||||    
T  45264437 ctgcatatgcgggagctttagtgcacc 45264411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 45812672 - 45812541
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||| |||||| || || |||||| ||||||||||||| |  ||||||| |||| |||||||||| |||||||||||||| ||| ||  ||     
T  45812672 tgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgtaaaaga--gggtaaggctgcatacaatacaccaaatggtgggaccccttcccaaaccc 45812575  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgcc 146  Q
    | | |||||||||||| ||||||||| |||||||    
T  45812574 tgcatatgcgggagctctagtgcaccgggttgcc 45812541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 47214532 - 47214666
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || |||||| ||||||| |||||  |||||||||  |||||||||||||| |||||||||||||| ||| ||| ||     
T  47214532 tgaaaggtcacgggttcaagtcctggaaacagtctcttgtttaaaa--cagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccagaccc 47214629  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||||| || |||||    
T  47214630 tgcatatgcgggagctctagtgcaccagattaccctt 47214666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 158
Target Start/End: Complemental strand, 31382324 - 31382206
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||||||||||||||||||| |||| |||| ||||||||||||||| |||||||||||||| |||   | || | | ||||||||||||||| || |||    
T  31382324 aaacagcctcttgtgtaaaaa-caggataaggctgcgtacaatacaccaaatggtgggaccccttcctggaccctgcatatgcgggagctttactgtacc 31382226  T
Q  139 aggttgcccttattgttttt 158  Q
     |||||||||| || |||||    
T  31382225 gggttgcccttttttttttt 31382206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 23796512 - 23796622
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||||||||||||||||||| ||  |||||  |||||||||||||| |||||||| ||||| ||| ||| || | | ||||| ||||||||||||||||    
T  23796512 aaacagcctcttgtgtaaaaatcaatgtaaggttgcgtacaatacaccaaatggtgagaccccttcccagaccctgcatatgctggagctttagtgcacc 23796611  T
Q  139 aggttgccctt 149  Q
     || |||||||    
T  23796612 gggctgccctt 23796622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 4430129 - 4430080
Alignment:
Q  47 tcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtggg 96  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4430129 tcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtggg 4430080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 6983946 - 6983812
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||| |||||| || || ||||||||||  || ||||||||||||||||  |||||||||||||| |||||||||||||| ||  | | ||     
T  6983946 tgaaaggtcacaggttcaagtcctggaaacagcctc--gtataaaaaacagggtaagtatgcgtacaatacaccaaatggtgggacccctttccggaccc 6983849  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | |||| || |||||||| ||||||| || |||||||    
T  6983848 tgcgtaggcaggagctttggtgcaccgggctgccctt 6983812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 18742054 - 18741958
Alignment:
Q  55 aaaaaacagggtaagactgcgtacaatacactaaa--tggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||| ||||||||||||||| |||  ||||||||||| ||| ||| || | |||||||| ||||||||||||||| |||| |||||    
T  18742054 aaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccagaccctgcgtatgcgagagctttagtgcaccgggtttccctt 18741958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 19701617 - 19701720
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    |||||||||||||||||||||||  ||||||  || |||||||||| | |||||||||| ||| ||| | | || | |||||||||||||||||||||||    
T  19701617 aaacagcctcttgtgtaaaaaacttggtaaggatgggtacaatacaccaaaatggtggggccccttcccggaccctgcgtatgcgggagctttagtgcac 19701716  T
Q  138 cagg 141  Q
    ||||    
T  19701717 cagg 19701720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 25468400 - 25468285
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||||||   |||||| || || ||||| ||||||||||||||| |||||||||  |||||||||||||| ||||||| |||||  ||| ||| ||     
T  25468400 tgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaatacaccaaatggttggacctcttcccagaccc 25468301  T
Q  113 tacgtatgcgggagct 128  Q
    | ||||||||||||||    
T  25468300 tgcgtatgcgggagct 25468285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 2435924 - 2435798
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagccc 111  Q
    |||||||||||  |||||| || || |||||||||| ||||| ||||| |||||||| |||||||||||||| | |||||||||||||| ||  |   ||    
T  2435924 tgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggtaagcctgcgtacaatacaccaaaatggtgggacccctttccgtacc 2435825  T
Q  112 ttacgtatgcgggagctttagtgcacc 138  Q
     | || |||||||||||||||||||||    
T  2435824 ctccgcatgcgggagctttagtgcacc 2435798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 10378828 - 10378738
Alignment:
Q  57 aaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccc 147  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| |||   | || | | |||||||||||||||||||||| || |||||    
T  10378828 aaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcttggaccctgcatatgcgggagctttagtgcaccgggctgccc 10378738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 17470457 - 17470411
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 85  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  17470457 aaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 17470411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 19932856 - 19932755
Alignment:
Q  49 ttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgcc 146  Q
    ||||||||||||||||||||| |||||||||||||||   |||||||||||||| ||| | | || | |||||||  || | ||||||||||||||||||    
T  19932856 ttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcaagatcattagtgcaccaggttgcc 19932757  T
Q  147 ct 148  Q
    ||    
T  19932756 ct 19932755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 8197095 - 8197200
Alignment:
Q  44 gcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggtt 143  Q
    ||||||||||||||||||| |||||| || |||||| ||||| ||||||| |||||| ||| | | || | ||||||  |||||||||||| ||| ||||    
T  8197095 gcctcttgtgtaaaaaacatggtaaggctacgtacagtacaccaaatggtaggaccccttctcggaccctgcgtatgttggagctttagtgtaccgggtt 8197194  T
Q  144 gccctt 149  Q
    ||||||    
T  8197195 gccctt 8197200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 19414460 - 19414594
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || |  ||| |||||||| |||||||  |||| |||| ||||||||||||||| |||||||||||||| ||| |   ||     
T  19414460 tgaaaggtcacgggttcaagtcctagaaagagcctcttatgtaaaa--caggttaaggctgcgtacaatacaccaaatggtgggaccccttcccgtaccc 19414557  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  19414558 tgcatatgcgggagctctagtgcaccgggttgccctt 19414594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 35019251 - 35019375
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||||||||  ||||| || |||||||| |||||||| |||||| |||  |||| |||| |||||||||| || |||||||||||  || ||| ||     
T  35019251 tgaaaggtcacagattcaagtcctgtaaacaacctcttgtataaaaatcagtataaggctgcatacaatacaccaattggtgggaccc-ctcccagaccc 35019349  T
Q  113 tacgtatgcgggagctttagtgcacc 138  Q
    | |||||||| |||||||||||||||    
T  35019350 tgcgtatgcgagagctttagtgcacc 35019375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 9939482 - 9939621
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaa--tggtgggaccct-ttcgcagc 109  Q
    ||||||||||| ||||||| || || ||||| |||||||| ||| ||||| ||||||  ||||| |||||||| |||  |||||||||||  ||| | |     
T  9939482 tgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggtaaggttgcgtgcaatacaccaaaaatggtgggacccccttctcgga 9939581  T
Q  110 ccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    || | |||||||||||||||||||||||| |||| |||||    
T  9939582 ccctgcgtatgcgggagctttagtgcaccgggttaccctt 9939621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 34679330 - 34679274
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgg 95  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||  |||||||||    
T  34679330 aaacaacctcttgtgtaaaaaacagggtaagactgcgtactatacatcaaatggtgg 34679274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 46859129 - 46859213
Alignment:
Q  55 aaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||||||||||||||||||||||||||| | |||||||||||| | ||  ||| |||| |||||| ||||| |||||||||||    
T  46859129 aaaaaacagggtaagactgcgtacaatacaccaaaatggtgggactcattttcaggccttgcgtatgtgggagttttagtgcacc 46859213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 11596560 - 11596650
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagcttt 130  Q
    ||||| |||||||||||||| |||||||||| ||||||| ||||||| |||||||||||||| |||   | || | ||||||||||||||||    
T  11596560 aaacaacctcttgtgtaaaa-acagggtaaggctgcgtataatacaccaaatggtgggaccccttcctggaccctgcgtatgcgggagcttt 11596650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 137
Target Start/End: Complemental strand, 12126946 - 12126850
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||||| ||||||||||||  ||||||||| ||||||||||||||| |||| ||||||||| ||| | | || | | |||||||||||| ||||||||    
T  12126946 aaacagcttcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaattgtgggaccccttcccggaccctgcatatgcgggagctgtagtgcac 12126850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 43768205 - 43768296
Alignment:
Q  58 aaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||| |||| |||||||||| || ||||||||||| ||| ||| || | ||||| ||||||||||| |||||| || |||||||    
T  43768205 aaacagggtaaggctgcctacaatacaccaattggtgggaccccttcccagaccctgcgtatacgggagctttaatgcaccgggctgccctt 43768296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 44485220 - 44485129
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagcttt 130  Q
    ||||| || ||||||||||| ||| |||||| ||||||||||||||| ||||||| |||||| ||| | |  | ||||||||||||||||||    
T  44485220 aaacaaccacttgtgtaaaagacatggtaaggctgcgtacaatacaccaaatggttggaccccttcccggatcctacgtatgcgggagcttt 44485129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 15505632 - 15505702
Alignment:
Q  60 acagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagcttt 130  Q
    |||||||||||||||||||||||||| |||||||||||||| ||| |   || | ||||||||||||||||    
T  15505632 acagggtaagactgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgcgggagcttt 15505702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 43207542 - 43207640
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaa-tggtgggaccctttcgcagcccttacgtatgcgggagctttagtgca 136  Q
    ||||| |||||| ||| |||||||||||||||| || |||||||||| ||| ||||||||||  ||| ||| || || ||||||| |||||||||||||    
T  43207542 aaacaacctcttatgtgaaaaacagggtaagacggcatacaatacaccaaattggtgggacctcttcccagaccctatgtatgcgagagctttagtgca 43207640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 22324927 - 22325049
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcccttacgtatgcgg 123  Q
    |||||| || || |||||||||||||||| |||||||||||||| |||| ||||||||||   |||||||||  |||  || | | || | |||||||||    
T  22324927 gttcaagtcttggaaacagcctcttgtgt-aaaaacagggtaaggctgcatacaatacaccaaaaatggtggagccccgtc-ccgaccctgcgtatgcgg 22325024  T
Q  124 gagctttagtgcaccaggttgccct 148  Q
    |||||||||||||||||| ||||||    
T  22325025 gagctttagtgcaccaggctgccct 22325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 35117905 - 35117777
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| || || ||| |||||||||||||||| |||||||||| ||| |||||||||||   ||||| |||||||| ||| | | |    
T  35117905 tgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggctgtgtacaatacaccaaaaatgatgggaccccttcccggac 35117806  T
Q  111 cttacgt-atgcgggagctttagtgcacc 138  Q
    | | ||| |||| ||||||||||||||||    
T  35117805 cctgcgtaatgcaggagctttagtgcacc 35117777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 147
Target Start/End: Complemental strand, 39215094 - 39214961
Alignment:
Q  15 aaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaata-cactaaatggtgggaccctttcgcagccctt 113  Q
    ||||||| ||||||||| |  || ||||| ||||||||||||||||| ||||||| ||||||||||||   | |||||||||| ||| ||| ||  || |    
T  39215094 aaaggtcccaagttcaagtactggaaacaacctcttgtgtaaaaaactgggtaaggctgcgtacaatattccaaaatggtgggtccccttcccaaaccct 39214995  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccc 147  Q
     |||||| || |||||||||||||| || |||||    
T  39214994 gcgtatgtggaagctttagtgcaccgggctgccc 39214961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 133
Target Start/End: Complemental strand, 18335425 - 18335305
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||||||| || || || |||||| ||||||| ||||||  |||||||   |||||||||||||  ||||| ||||||||||||  || ||     
T  18335425 tgaaaggtcacaagttaaagtcctggaaacagtctcttgtttaaaaattagggtaaagttgcgtacaatacatcaaatgatgggaccctttcctagacca 18335326  T
Q  113 tacgtatgcgggagctttagt 133  Q
    |  |||| |||||||||||||    
T  18335325 tgtgtatacgggagctttagt 18335305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 24564365 - 24564445
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggt 93  Q
    ||||||||| ||  ||||| || || ||||| |||||||||||||||||||||||||  |||||||||| ||| |||||||    
T  24564365 tgaaaggtcgcagattcaagtcttggaaacaacctcttgtgtaaaaaacagggtaagggtgcgtacaattcaccaaatggt 24564445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 149
Target Start/End: Complemental strand, 42304303 - 42304208
Alignment:
Q  56 aaaaacagggtaagactgcgtacaatacactaaa--tggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||  |||||||||||||| |||  ||||||||||| ||| | | || | |||||| ||||||||||||||||| | ||||||||    
T  42304303 aaaaacagggtaaggttgcgtacaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccggattgccctt 42304208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 148
Target Start/End: Complemental strand, 15511288 - 15511150
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcg--tacaataca-ctaaatggtgggaccctttcgcagc 109  Q
    ||||||||||||  || || || || |||| |||||||||||||||||||||||||| |||||  ||||||||| | ||||||||| |||| |||   |     
T  15511288 tgaaaggtcacatattgaagtcctggaaaccgcctcttgtgtaaaaaacagggtaaggctgcggatacaatacaccaaaatggtggtaccccttcctgga 15511189  T
Q  110 ccttacgtatgcgggagctttagtgcaccaggttgccct 148  Q
    || | |||||| | ||||||||||||||| || ||||||    
T  15511188 ccctgcgtatgtgtgagctttagtgcaccgggctgccct 15511150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 20999957 - 20999851
Alignment:
Q  43 agcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagc-ccttacgtatgcgggagctttagtgcaccagg 141  Q
    |||| ||||||||||||||| || ||| ||||||||||||||| ||||| |||| ||| ||| | || || | |||| ||||||||||||||||||| ||    
T  20999957 agccacttgtgtaaaaaacaaggcaaggctgcgtacaatacaccaaatgatggggccccttc-cggcaccctgcgtacgcgggagctttagtgcaccggg 20999859  T
Q  142 ttgccctt 149  Q
     |||||||    
T  20999858 ctgccctt 20999851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 30682848 - 30682963
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcggga 125  Q
    ||||||||| || ||| |||||||||||| ||||||| ||||||| || |||| |||||  |||||||||||||| ||| | | || | |||||||||||    
T  30682848 gttcaaatcctgaaaatagcctcttgtgt-aaaaacaaggtaagattgtgtac-atacaacaaatggtgggaccccttcccggaccgtgcgtatgcggga 30682945  T
Q  126 gctttagtgcaccaggttg 144  Q
    ||||| |||||||| ||||    
T  30682946 gcttt-gtgcaccaagttg 30682963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 27136762 - 27136701
Alignment:
Q  40 aacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccc 100  Q
    |||| |||||||||||||||||| ||||||  ||||||||||||| | ||||||||||||||    
T  27136762 aacaacctcttgtgtaaaaaacatggtaaggttgcgtacaatacaccaaaatggtgggaccc 27136701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 52910238 - 52910311
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgt-aaaaaacagggtaagactgcgtacaatacac 85  Q
    |||||||||||| |||||| || || ||||||||||||  || ||||||||||||| ||||| |||||||||||    
T  52910238 tgaaaggtcacaggttcaactcttggaaacagcctcttaggtaaaaaaacagggtaggactgtgtacaatacac 52910311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 50760359 - 50760291
Alignment:
Q  17 aggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 85  Q
    |||||||  |||||| || || ||||||||||||||||| ||||| ||||||| ||||||| |||||||    
T  50760359 aggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaactgggtaaggctgcgtataatacac 50760291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 31272511 - 31272429
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtggg 96  Q
    |||||||||||| |||||| || || ||||| ||||||||||| |||||| |||||| |||||||||  |||  ||||||||||    
T  31272511 tgaaaggtcacaggttcaagtcctggaaacaacctcttgtgta-aaaacatggtaaggctgcgtacagcacatcaaatggtggg 31272429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 19656217 - 19656151
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttc 104  Q
    |||||||||||||||||||||||| |||||  ||  |||||||||| | ||||||| ||||||||||    
T  19656217 aaacagcctcttgtgtaaaaaacatggtaacgctatgtacaatacaccaaaatggtaggaccctttc 19656151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 33223031 - 33223092
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccc 100  Q
    |||||||||||||||| |||||||||| |||  ||||||||||||| | ||||||||||||||    
T  33223031 aaacagcctcttgtgt-aaaaacagggaaaggttgcgtacaatacaccaaaatggtgggaccc 33223092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 50606498 - 50606560
Alignment:
Q  87 aaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||| ||| | | || | | |||||||||||||||||||||| ||||||||||    
T  50606498 aaatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctt 50606560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 22327120 - 22327185
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtac 78  Q
    ||||||||| |  |||||| || || ||||| ||||||||||||||||||||||||| ||| ||||    
T  22327120 tgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtac 22327185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 23371145 - 23371268
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || |  |||||||| |||| ||||||||| ||| |||  || ||||||||||| ||||| |||||||| ||| ||| ||     
T  23371145 tgaaaggtcacgggttcaagtcctagaaacagccacttgggtaaaaaac-gggcaaggttgtgtacaatacaccaaatgctgggaccccttc-cagaccc 23371242  T
Q  113 tacgtatgcgggagctttagtgcacc 138  Q
    | |||||| || ||||||||||||||    
T  23371243 tgcgtatgtggtagctttagtgcacc 23371268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 34149071 - 34149010
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    ||||||||||||||||| |||| ||||||||  ||||||||| | || |||||||| |||||    
T  34149071 aaacagcctcttgtgtagaaaatagggtaaggttgcgtacaaaagaccaaatggtgagaccc 34149010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 20036241 - 20036329
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaa-aaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    |||||||||||  |||||| || || |||||  |||||||||||| | | ||||||||| ||||| |||||||| ||||||||| ||||    
T  20036241 tgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaagagaaagggtaagattgcgttcaatacaccaaatggtggaaccc 20036329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 20169200 - 20169156
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatac 83  Q
    ||||| |||||||||||||||| | |||||||||| |||||||||    
T  20169200 aaacaccctcttgtgtaaaaaaaaaggtaagactgtgtacaatac 20169156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 21910743 - 21910699
Alignment:
Q  56 aaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    ||||| ||||||||  |||||||||||||| ||||||||||||||    
T  21910743 aaaaatagggtaaggttgcgtacaatacaccaaatggtgggaccc 21910699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 25290214 - 25290242
Alignment:
Q  41 acagcctcttgtgtaaaaaacagggtaag 69  Q
    |||||||||||||||||||||||||||||    
T  25290214 acagcctcttgtgtaaaaaacagggtaag 25290242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 11617725 - 11617586
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||| |||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||   | ||     
T  11617725 tgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcctggaccc 11617626  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgcccttatt 152  Q
    | ||||||| ||| |||||||||||| |||||||||||||    
T  11617625 tgcgtatgcaggacctttagtgcaccgggttgcccttatt 11617586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 2541155 - 2541020
Alignment:
Q  14 gaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccctt 113  Q
    ||||||||||  |||||| || || ||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| ||| | | || |    
T  2541155 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtactatacaccaaatggtgggaccccttcccggtccct 2541056  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     |||||||||||||||||||||||| |||| |||||    
T  2541055 gcgtatgcgggagctttagtgcaccgggtttccctt 2541020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 23419809 - 23419675
Alignment:
Q  15 aaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccctta 114  Q
    |||||||||| |||||| |  || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||  || ||||     
T  23419809 aaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcctagaccttg 23419710  T
Q  115 cgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||| |||||| ||||||||||| | || |||||||    
T  23419709 cgtgtgcgggggctttagtgcatcgggctgccctt 23419675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 19427025 - 19426882
Alignment:
Q  14 gaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccctt 113  Q
    ||||||||||  |||||| || || |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||| | | || |    
T  19427025 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaagactgcgtacaatacaccaaatggtgggaccc-ttctcggaccct 19426927  T
Q  114 acgtatgcgggagctttagtgcaccaggttgcccttattgttttt 158  Q
     | |||||| |||||| |||||||| |||||||||| || |||||    
T  19426926 gcatatgcgagagcttcagtgcaccgggttgcccttttttttttt 19426882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 7879639 - 7879781
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || |||||  ||||||||||||||||| |||||| ||||||||||||||| |||||||||||||| ||| | | || | |    
T  7879639 aaggtcacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgc 7879738  T
Q  116 gtatgcgggagctttagtgcaccaggttgcccttattgttttt 158  Q
    |||||||||||||| |||||||| |||||||||| || |||||    
T  7879739 gtatgcgggagcttcagtgcaccgggttgcccttttttttttt 7879781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 21172144 - 21172010
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | ||     
T  21172144 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc 21172047  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  21172046 tgcatatgcgggagctctagtgcaccgggttgccctt 21172010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 31591244 - 31591110
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||||||| ||||||| || || ||||| ||||||||||||||  ||| ||||| |||||||||||||| ||||||||||||||| ||| | | |||    
T  31591244 tgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaa--cagagtaaggctgcgtacaatacaataaatggtgggaccccttcccggacct 31591147  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  31591146 tgcatatgcgggagctctagtgcaccgggttgccctt 31591110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 32758259 - 32758393
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||| |||||| || || ||||||||||||||||||||  ||||||||| ||| ||||||||||| |||||||||||||| ||| | | ||     
T  32758259 tgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccc 32758356  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  32758357 tgcatatgcgggagctctagtgcaccgggttgccctt 32758393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 42798670 - 42798803
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || |||||| ||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| | | || | |    
T  42798670 aaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaaatggtgggaccctttcccggaccctgc 42798769  T
Q  116 gtatgcgggagctttagtgcaccaggttgccctt 149  Q
     |||||||||||| ||||||| | ||||||||||    
T  42798770 atatgcgggagctatagtgcatcgggttgccctt 42798803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 27629633 - 27629768
Alignment:
Q  14 gaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccctt 113  Q
    ||||||||||  |||||| || || |||||||||||||||||||||||||||||||  |||||| ||||||| |||||||||||||| ||| | | || |    
T  27629633 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtaaaatacaccaaatggtgggaccccttcccgggccct 27629732  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | ||||||| ||||| |||||||| ||||||||||    
T  27629733 gcatatgcggtagcttcagtgcaccgggttgccctt 27629768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 33872046 - 33871914
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||||| |  |||||| || || ||||| ||||||||||||||| |||| |||| ||||||||||||||| |||||||||||||| ||| ||| ||     
T  33872046 tgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaa-caggataaggctgcgtacaatacaccaaatggtgggaccccttcccagaccc 33871948  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgcc 146  Q
    |  ||||||| |||||||||||||||||||||||    
T  33871947 tgtgtatgcgagagctttagtgcaccaggttgcc 33871914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 42391235 - 42391101
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||| ||||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | ||     
T  42391235 tgaaaggtcacgggttcaagtcctggaaacagcttcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc 42391138  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  42391137 tgcatatgcgggagctctagtgcaccgggttgccctt 42391101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 42805525 - 42805660
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagccctt 113  Q
    ||||||||  |||||| || || ||||||||||||||||||||||||||||||| ||| ||||||||||| |  ||||||||||||| ||| | | ||      
T  42805525 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggacccc 42805624  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | |||||||||||||||||||||| ||||||||||    
T  42805625 gcatatgcgggagctttagtgcaccgggttgccctt 42805660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 47716460 - 47716595
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagccctt 113  Q
    ||||||||  |||||| || || ||||||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||| ||| | | ||      
T  47716460 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggacccc 47716559  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | |||||||||||||| ||||||| ||||||||||    
T  47716560 gcatatgcgggagctttggtgcaccgggttgccctt 47716595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 10693208 - 10693074
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || |||||||||||||||||||| |  ||||||| ||||||||||||||| |||||||||||||| ||| | | ||     
T  10693208 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaga--gggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc 10693111  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||  ||||||||||    
T  10693110 tgcatatgcgggagctctagtgcactgggttgccctt 10693074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 28362282 - 28362165
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||| |||||| || |  |||| ||||||||||||||||||  |||||| ||||||||||||||| |||||||||||||| ||| ||| |||    
T  28362282 tgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaaggctgcgtacaatacaccaaatggtgggaccccttcccagacct 28362183  T
Q  113 tacgtatgcgggagcttt 130  Q
    | | |||| |||||||||    
T  28362182 tgcatatgtgggagcttt 28362165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 35334948 - 35334818
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    |||||||| ||||||| || || |||||| |||  ||||||||||||||||||||||| |||||||||||  ||||||||||||| ||| | | || | |    
T  35334948 aaggtcacgagttcaagtcctggaaacagtctc--gtgtaaaaaacagggtaagactgtgtacaatacaccgaatggtgggaccccttcccggaccctgc 35334851  T
Q  116 gtatgcgggagctttagtgcaccaggttgccct 148  Q
    |||||| |||||||||||||||| |||| ||||    
T  35334850 gtatgcaggagctttagtgcaccgggtttccct 35334818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 35787378 - 35787270
Alignment:
Q  40 aacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacca 139  Q
    |||||||||||||||||||| || ||||||  |||||||||||||| |||||| ||||||| ||| | | |||| ||||||||||||||| | ||||||     
T  35787378 aacagcctcttgtgtaaaaa-catggtaaggttgcgtacaatacaccaaatggcgggaccccttcccggaccttgcgtatgcgggagcttcaatgcaccg 35787280  T
Q  140 ggttgccctt 149  Q
    ||||||||||    
T  35787279 ggttgccctt 35787270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 43557470 - 43557618
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcc 110  Q
    ||||||||||   |||||| || || ||||||||||||||||||||||||| ||||| ||||||||||||||| |  |||||||||||||  || | | |    
T  43557470 tgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgggaccccctcccggac 43557569  T
Q  111 cttacgtatgcgggagc-tttagtgcaccaggttgcccttattgttttt 158  Q
      | ||||||||||||| ||||||||||| |||||||||| || |||||    
T  43557570 tctgcgtatgcgggagcttttagtgcaccgggttgcccttttttttttt 43557618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 19265813 - 19265947
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || | |||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||||||| ||| | | ||     
T  19265813 tgaaaggtcacgggttcaagtcttggatacagccgcttgtgtaaaaag-agggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggacc- 19265910  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||| |||| ||||||||||||||||| || |||||||    
T  19265911 tacatatgtgggagctttagtgcaccgggctgccctt 19265947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 34626344 - 34626209
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||| ||||  ||||| || || |||||||||| |||||||||| ||||||||| |||||| |||||||| ||||||||||| || ||| | | ||     
T  34626344 tgaaaggccacagattcaagtcctggaaacagcctcctgtgtaaaaa-cagggtaaggctgcgttcaatacaccaaatggtgggatcccttcccggaccc 34626246  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | ||||||||||||||||||| || | ||||||||||    
T  34626245 tgcgtatgcgggagctttagttcatcgggttgccctt 34626209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 42102019 - 42101899
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaa-tggtgggaccctttcgcagccctta 114  Q
    ||||||| |||||||| || || ||||||||||||  |||||||||||||||| |||||||||| ||| ||||| ||||||||||||||| | | || |     
T  42102019 aaggtcaaaagttcaagtcctggaaacagcctcttccgtaaaaaacagggtaacactgcgtacagtactctaaagtggtgggaccctttcccggaccctg 42101920  T
Q  115 cgtatgcgggagctttagtgc 135  Q
    ||||| ||| |||||||||||    
T  42101919 cgtatccggcagctttagtgc 42101899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 149
Target Start/End: Complemental strand, 22699074 - 22698968
Alignment:
Q  46 ctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccc-tttcgcagcccttacgtatgcgggagctttagtgcaccaggt 142  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||| | | || |  ||||||||||||| ||||||||| |||    
T  22699074 ctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaaaatggtgggacccttttcccggaccctgtgtatgcgggagctatagtgcaccgggt 22698975  T
Q  143 tgccctt 149  Q
    | |||||    
T  22698974 taccctt 22698968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 42476897 - 42477005
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||| |||||||||||||  || |||||| ||||||||||||||| |||||||||||||| |||  || |  | | |||||||||||| |||||||||    
T  42476897 aaacagtctcttgtgtaaaa--caaggtaaggctgcgtacaatacaccaaatggtgggaccccttcctaggctctgcatatgcgggagctctagtgcacc 42476994  T
Q  139 aggttgccctt 149  Q
    |||||||||||    
T  42476995 aggttgccctt 42477005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 48123621 - 48123534
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    ||||||||||   |||||| || || ||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||||||||    
T  48123621 tgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggtaaaactgcatacaatacaccaaatggtgggaccc 48123534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 48735231 - 48735123
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||| |||||||||||||| ||  |||||| ||||||||||||||| |||||||||||||| ||| | | || | | |||||||||||| |||||||||    
T  48735231 aaacaacctcttgtgtaaaacac--ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcacc 48735134  T
Q  139 aggttgccctt 149  Q
     ||||||||||    
T  48735133 gggttgccctt 48735123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 14099113 - 14099008
Alignment:
Q  43 agcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggt 142  Q
    ||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||| ||| |   || ||||||||| |||| |||  |||||||||     
T  14099113 agccttttgtgtaaaaaacaggttaagactgcgtacaatacaccaaatggtgggaccccttcccgaaccctacgtatgcaggagattt-ttgcaccaggc 14099015  T
Q  143 tgccctt 149  Q
    |||||||    
T  14099014 tgccctt 14099008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 14409130 - 14409025
Alignment:
Q  43 agcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggt 142  Q
    ||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||| ||| |   || ||||||||| |||| |||  |||||||||     
T  14409130 agccttttgtgtaaaaaacaggttaagactgcgtacaatacaccaaatggtgggaccccttcccgaaccctacgtatgcaggagattt-ttgcaccaggc 14409032  T
Q  143 tgccctt 149  Q
    |||||||    
T  14409031 tgccctt 14409025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 18512588 - 18512455
Alignment:
Q  14 gaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccctt 113  Q
    ||||||||||  |||||| || || ||||| | |||||||||||||  |||||||| |||||||||||||||  ||||||||||||| ||| | | || |    
T  18512588 gaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacaccgaatggtgggaccccttcccggaccct 18512490  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccct 148  Q
     |||||||||||||||| ||||||  |||||||||    
T  18512489 gcgtatgcgggagctttggtgcactgggttgccct 18512455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 29907417 - 29907552
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagccc 111  Q
    |||||||||||  |||||| || |  |||||||||||||||||||||| || ||||| |||||| ||||||| | ||||||||||||||  || | | ||    
T  29907417 tgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaatagtgtaaggctgcgttcaatacaccaaaatggtgggaccccatcccggacc 29907516  T
Q  112 ttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     |  ||||||||||||||||||||||| ||||||||||    
T  29907517 ct--gtatgcgggagctttagtgcaccgggttgccctt 29907552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 40463901 - 40464010
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||||| |||||||||||||| ||| | | || | ||||||||||||||| ||||||||    
T  40463901 aaacagtctcttgtgtaaaaa-ctgggtaaggctgcgtataatacaccaaatggtgggaccccttctcggaccctgcgtatgcgggagcttcagtgcacc 40463999  T
Q  139 aggttgccctt 149  Q
      |||||||||    
T  40464000 gagttgccctt 40464010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 155
Target Start/End: Original strand, 16341302 - 16341419
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||||||||||||||||||||||||||||| || ||||||||||| | |||||||||| ||  ||| | | |||  | |||||||||||||| ||||||    
T  16341302 aaacagcctcttgtgtaaaaaacagggtaaggctacgtacaatacaccaaaatggtgggccctcttcccggacctatcatatgcgggagctttggtgcac 16341401  T
Q  138 caggttgcccttattgtt 155  Q
    | || |||||||| ||||    
T  16341402 cgggctgcccttaatgtt 16341419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 18747484 - 18747621
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccc 111  Q
    |||||||||||  | |||| || || ||||||||| |||||||||||| ||||||||| ||||||| ||||||| || ||||||||||| |||     ||    
T  18747484 tgaaaggtcacgggatcaagtcttggaaacagccttttgtgtaaaaaagcagggtaaggctgcgtataatacaccaattggtgggaccccttcctgaacc 18747583  T
Q  112 ttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | |||||||||||||||||||||||| || |||||||    
T  18747584 ctgcgtatgcgggagctttagtgcaccgggctgccctt 18747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 7644954 - 7645026
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 85  Q
    |||||||||||  |||||| || || ||||||||||||||||||||||||||||||||  |||||||||||||    
T  7644954 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagatagcgtacaatacac 7645026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 21566439 - 21566559
Alignment:
Q  19 gtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagcccttacgt 117  Q
    |||||| |||||| || || |||| |||||||||||||||||||| | |||||||||||||||||| | ||||||| |||||| ||| |   || | | |    
T  21566439 gtcacaggttcaagtcttggaaaccgcctcttgtgtaaaaaacagaggaagactgcgtacaatacaccaaaatggtaggaccccttcccgaaccctgcat 21566538  T
Q  118 atgcgggagctttagtgcacc 138  Q
    |||||||||||||||||||||    
T  21566539 atgcgggagctttagtgcacc 21566559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 38604551 - 38604642
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagcttta 131  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||| ||  | | || | |||||||||||||||||    
T  38604551 aaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaatggtgagacccctttccggaccctgcgtatgcgggagcttta 38604642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 46354195 - 46354281
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccc 100  Q
    ||||||||  |||||| || || ||||| ||||||||||||||||||||||||| ||||||||||||||| |  |||||||||||||    
T  46354195 aaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 46354281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 2663057 - 2662982
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggacccttt 103  Q
    |||||| || || |||||||||||||||||||| |  ||||||| ||||||||||||||| |||||||||||||||||    
T  2663057 gttcaagtcctggaaacagcctcttgtgtaaaata--gggtaaggctgcgtacaatacaccaaatggtgggacccttt 2662982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 23619075 - 23618978
Alignment:
Q  52 tgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||| ||||||| |||||  || ||||||||||  |||||||||||||| ||||||| |||| ||| ||| |||||||||||||| | ||||||||||    
T  23619075 tgtataaaacagagtaagcttgtgtacaatacatcaaatggtgggaccccttcgcagaccttgcgtttgcaggagctttagtgcagcgggttgccctt 23618978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 8149077 - 8148947
Alignment:
Q  19 gtcacaagttcaaatcgtgtaaacagcctcttgtgt-aaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgt 117  Q
    ||||| ||||||| || || ||||  |||||||||| |||||| ||||||||  |||||||||||||| |||||||||||||| ||| |||  ||| |||    
T  8149077 gtcacgagttcaagtcctgaaaactacctcttgtgttaaaaaatagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccag-acttgcgt 8148979  T
Q  118 atgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||| ||| ||||||||| ||| || |||||    
T  8148978 atgcgagagttttagtgcatcagattaccctt 8148947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 19266461 - 19266564
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcggga 125  Q
    |||||| || || ||| |||| |||| ||||||||||||||||| ||||||||||||||| |||| |||||| || ||| | | || | |||||||||||    
T  19266461 gttcaagtcctgaaaatagccacttgcgtaaaaaacagggtaaggctgcgtacaatacaccaaattgtgggatcccttcccggaccctgcgtatgcggga 19266560  T
Q  126 gctt 129  Q
    ||||    
T  19266561 gctt 19266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 27889395 - 27889317
Alignment:
Q  71 ctgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||| |||||||||||||| ||| | | || | |||||||||||||||| || |||| ||||||||||    
T  27889395 ctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctttggtacaccgggttgccctt 27889317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 47077990 - 47077867
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || |||||| ||||||||||||| | ||  |||   |||||||||||||| |||||||||||||| ||| ||  ||     
T  47077990 tgaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaatagag--taaagttgcgtacaatacacaaaatggtgggaccccttcccaaaccc 47077893  T
Q  113 tacgtatgcgggagctttagtgcacc 138  Q
    ||| |||||||||||| |||||||||    
T  47077892 tacatatgcgggagctctagtgcacc 47077867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 1408485 - 1408542
Alignment:
Q  43 agcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    |||||||||||||||||||| |||||| ||| ||||||||||  ||||||||||||||    
T  1408485 agcctcttgtgtaaaaaacaaggtaaggctgtgtacaatacagcaaatggtgggaccc 1408542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 35203437 - 35203506
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaata 82  Q
    |||||||||||  |||||| || || |||||  ||||||||||||||||||| |||||||||||||||||    
T  35203437 tgaaaggtcacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggataagactgcgtacaata 35203506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 38262330 - 38262197
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || |||||| ||||||||||||||| | |||||   ||| |||||||||| ||||| |||||||| ||| |   |  | |    
T  38262330 aaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaatatggtaatgttgcatacaatacaccaaatgatgggaccccttcccgaacactgc 38262231  T
Q  116 gtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||||||||||| | ||||||||    
T  38262230 gtatgcgggagctttagtgcaccggattgccctt 38262197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 25198749 - 25198856
Alignment:
Q  39 aaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    |||||| || |||||||||||| || |||||||| ||||| ||| ||||||||||| ||| || ||| ||| || | |||||| | ||||||||||||||    
T  25198749 aaacagtcttttgtgtaaaaaaacaaggtaagaccgcgtataatgcactaaatggtaggatcccttcccagacccttcgtatgtgagagctttagtgcac 25198848  T
Q  138 caggttgc 145  Q
    | ||||||    
T  25198849 cgggttgc 25198856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 5180268 - 5180222
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 85  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||||    
T  5180268 aaacagcctcttgtgtcaaaaacagggtaagactgtgtacaacacac 5180222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 11741793 - 11741936
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||||||   |||||| || || ||||||| ||| |||||||| |  ||||||| ||||||||||||||| ||||||||||| || ||| | |        
T  11741793 tgaaaggtcatgggttcaagtcctgaaaacagcttctagtgtaaaata--gggtaaggctgcgtacaatacaccaaatggtgggatcccttcccggattc 11741890  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgcccttattgttttt 158  Q
    | |  ||||||||||| ||||||||| |||||||||||| ||||||    
T  11741891 tgcacatgcgggagctctagtgcaccgggttgcccttatagttttt 11741936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 149
Target Start/End: Complemental strand, 45018958 - 45018924
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||||||||||||||||    
T  45018958 cgtatgcgggagctttagtgcaccaggttgccctt 45018924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 12473302 - 12473374
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 85  Q
    ||||||||||   |||||| || || ||||| |||||||||| ||||||||||||||  ||||||||||||||    
T  12473302 tgaaaggtcatgggttcaagtcctgcaaacaacctcttgtgtcaaaaacagggtaaggatgcgtacaatacac 12473374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 1524323 - 1524276
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaa 60  Q
    ||||||||||||||||||| || | |||||||||||||||||| ||||    
T  1524323 tgaaaggtcacaagttcaagtcttataaacagcctcttgtgtataaaa 1524276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 138
Target Start/End: Original strand, 23231585 - 23231680
Alignment:
Q  43 agcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||||||||||||| | | |||||| ||||||| |||||||  |||| |||||||| ||| |   || | ||||||||| ||||||||||||||    
T  23231585 agcctcttgtgtaaaatataaggtaaggctgcgtataatacaccgaatgatgggaccccttcccgaaccctgcgtatgcggcagctttagtgcacc 23231680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 6736888 - 6736969
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgg 95  Q
    |||||||||||  |||||| || |  ||||| |||||||| |||||| || ||||||||||| |||||||||| |||||||||    
T  6736888 tgaaaggtcacgggttcaagtcctcaaaacaacctcttgtataaaaa-caaggtaagactgcatacaatacaccaaatggtgg 6736969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 149
Target Start/End: Original strand, 36602547 - 36602581
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||||| ||||||||||    
T  36602547 cgtatgcgggagctttagtgcaccgggttgccctt 36602581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 32233271 - 32233188
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtggga 97  Q
    ||||||||||   |||||| || || ||||| ||||||||||||||| ||||||||| | ||||| | ||||| |||||||||||    
T  32233271 tgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaa-cagggtaaggcagcgtatattacaccaaatggtggga 32233188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 33500556 - 33500635
Alignment:
Q  58 aaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgc 135  Q
    ||||||||||||||||||||| ||||||   |||||||||||||| ||| | | || | ||||||||||| ||| |||||    
T  33500556 aaacagggtaagactgcgtactatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcgggatcttcagtgc 33500635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 5e-34; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 36720797 - 36720930
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| | | || | |    
T  36720797 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgc 36720896  T
Q  116 gtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||| |||||||||||||| ||||||||||    
T  36720897 gtatgcggaagctttagtgcacccggttgccctt 36720930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 28817760 - 28817627
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || ||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||| ||| | | || | |    
T  28817760 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacccaatggtgggaccccttcccggaccctgc 28817661  T
Q  116 gtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||||||||| | ||||||||||    
T  28817660 gtatgcgggagctttagtgcatcgggttgccctt 28817627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 45071289 - 45071400
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||| | | |||| ||||||||||||||| ||||||||    
T  45071289 aaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcacc 45071387  T
Q  139 aggttgcccttat 151  Q
     ||||||||||||    
T  45071388 gggttgcccttat 45071400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 29521819 - 29521690
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || |||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||| ||  || ||| || | |    
T  29521819 aaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaacccatcccagaccctgc 29521720  T
Q  116 gtatgcgggagctttagtgcaccaggttgc 145  Q
    ||||||||||||||||||||||| ||||||    
T  29521719 gtatgcgggagctttagtgcaccgggttgc 29521690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 29877118 - 29877227
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| | | || | ||||||||||||| ||||||||||    
T  29877118 aaacagccttttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcgttagtgcacc 29877217  T
Q  139 aggttgccct 148  Q
    ||| ||||||    
T  29877218 aggctgccct 29877227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 44530150 - 44530283
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || ||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||   | || | |    
T  44530150 aaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcctggaccctgc 44530249  T
Q  116 gtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||||||||||| ||||| ||||    
T  44530250 gtatgcgggagctttagtgcaccgggttgacctt 44530283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 2626518 - 2626656
Alignment:
Q  14 gaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaa---aacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcc 110  Q
    ||||||||||  |||||| || || ||||||||||||||||||||   ||||||||||||||||||||||||||| ||||| |||||||| ||| ||| |    
T  2626518 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcgtacaatacaccaaatgatgggaccccttcccagac 2626617  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | | ||||||||||||| |||||||||| ||||||||    
T  2626618 cctgcatatgcgggagcttcagtgcaccagattgccctt 2626656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 39461133 - 39460995
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| || || ||||||||||||||||||||||||| ||||| ||||||||||||||| |  ||||||| ||||| ||| | | |    
T  39461133 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgagaccccttcccggac 39461034  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||||||||||||||| ||||||||||    
T  39461033 cctgcgtatgcgggagctttagtgcaccgggttgccctt 39460995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 22598155 - 22598292
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  ||||||||| || ||||| ||||||||||||||||||||||||| ||  ||||||||||| || ||||| ||||||||| | | |||    
T  22598155 tgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtacaatacaccaattggtgagaccctttcccggacct 22598254  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgcccttat 151  Q
    | ||||||||||| |||||||||||||||  ||||||||    
T  22598255 tgcgtatgcggga-ctttagtgcaccaggcagcccttat 22598292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 35261703 - 35261813
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||| ||||||||||||||||||||||||  |||||||||||||| |||||||||||||| |||   | || | ||||||||||||||||||||||||    
T  35261703 aaacagtctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaaatggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcacc 35261802  T
Q  139 aggttgccctt 149  Q
     ||||||||||    
T  35261803 gggttgccctt 35261813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 12625913 - 12626024
Alignment:
Q  39 aaacagcctcttgtgtaaaa-aacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||  || | | || | |||||||||||||||||||||||    
T  12625913 aaacaacctcttgtgtaaaaaaacagggtaagactgcatacaatacaccaaatggtgggaccccctcccggaccctgcgtatgcgggagctttagtgcac 12626012  T
Q  138 caggttgccctt 149  Q
    | ||||||||||    
T  12626013 cgggttgccctt 12626024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 13160726 - 13160835
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||| | | || | ||||||||||||||| ||||| ||    
T  13160726 aaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcgcc 13160824  T
Q  139 aggttgccctt 149  Q
     ||||||||||    
T  13160825 gggttgccctt 13160835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 12670385 - 12670251
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | ||     
T  12670385 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc 12670288  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| |||| |||||    
T  12670287 tgcatatgcgggagctctagtgcaccgggttaccctt 12670251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 26954133 - 26954269
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacactaa--atggtgggaccctttcgcagccct 112  Q
    ||||||||  |||||| || || |||||||||||||||||||||| ||||||||| ||||||||||||||| ||  |||||||||||| ||| ||| |||    
T  26954133 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagacct 26954232  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
      | |||||||||||||||||||||  ||||||||||    
T  26954233 cgcatatgcgggagctttagtgcactgggttgccctt 26954269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 6760823 - 6760958
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagccctt 113  Q
    ||||||||  |||||| || || ||||||||||||||||||||||||||||||| || |||||||||||| |  ||||||||||||| ||| | | ||      
T  6760823 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgtacaatacaccaataatggtgggaccccttctcggacccc 6760922  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | |||||||||||||||||||||| ||||||||||    
T  6760923 gcatatgcgggagctttagtgcaccgggttgccctt 6760958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 17823575 - 17823710
Alignment:
Q  14 gaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccctt 113  Q
    ||||||||||  |||||| || || ||||||||||||||||||||| |||| |||||||||||| ||||||| ||||||||| |||| ||| |   || |    
T  17823575 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggataagactgcgtaaaatacaccaaatggtggaaccccttcccgaaccct 17823674  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | ||||| |||||||||||||||| ||||||||||    
T  17823675 gcatatgcaggagctttagtgcaccgggttgccctt 17823710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 18164896 - 18164764
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||| |||||||||  |||||||||||||| ||| | || |||| |||| | | ||     
T  18164896 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggttgcgtacaatacaccaaaggatgtgaccatttcccggaccc 18164798  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgcc 146  Q
    | |||||||||||||||||||||||| |||||||    
T  18164797 tgcgtatgcgggagctttagtgcaccgggttgcc 18164764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 30454232 - 30454098
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||  || |||||| |||||||| |||||| |||||||||||||| ||| | | ||     
T  30454232 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa--caaggtaaggctgcgtacgatacaccaaatggtgggaccccttcccggaccc 30454135  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  30454134 tgcatatgcgggagctctagtgcaccgggttgccctt 30454098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 5689642 - 5689754
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcggga 125  Q
    |||||| || |||||| ||||||||||||||||| ||||||||| ||||||||||||||| ||||||||| |||| ||| |   || | |||||| ||||    
T  5689642 gttcaagtcttgtaaatagcctcttgtgtaaaaagcagggtaaggctgcgtacaatacaccaaatggtggaaccccttcccgaaccatgcgtatgtggga 5689741  T
Q  126 gctttagtgcacc 138  Q
    |||||||||||||    
T  5689742 gctttagtgcacc 5689754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 8484062 - 8483950
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcggga 125  Q
    |||||| || || ||||| ||||||||||||||||||||| ||| ||||||||||||||| || |||||||||||  || ||| || | |||||||||||    
T  8484062 gttcaagtcctggaaacaacctcttgtgtaaaaaacagggcaaggctgcgtacaatacaccaattggtgggaccccatcccagaccctgcgtatgcggga 8483963  T
Q  126 gctttagtgcacc 138  Q
    ||||||| |||||    
T  8483962 gctttagggcacc 8483950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 5135413 - 5135291
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcggga 125  Q
    |||||| || || |||||||||||||||||||||| |||||||| ||| ||||||||||| |||||||||||||| ||| | | || | ||||||| |||    
T  5135413 gttcaagtcctggaaacagcctcttgtgtaaaaaagagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcagga 5135314  T
Q  126 gctttagtgcaccaggttgccctt 149  Q
    ||||| ||||||| || |||||||    
T  5135313 gcttt-gtgcaccgggctgccctt 5135291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 10857852 - 10857963
Alignment:
Q  39 aaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    |||| ||||||||||||||||| ||||||||| ||||| ||||||||| || ||||||||||  |||   | |||| |||||||||||||||||||||||    
T  10857852 aaaccgcctcttgtgtaaaaaaacagggtaaggctgcgcacaatacaccaattggtgggaccacttcctggaccttgcgtatgcgggagctttagtgcac 10857951  T
Q  138 caggttgccctt 149  Q
    | ||||||||||    
T  10857952 cgggttgccctt 10857963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 8897875 - 8897765
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||| || ||||||||||||| |||||||| || |||||||||||| |||||||||||||| ||| | | || | | ||||||||||||||| ||||||    
T  8897875 aaacaaccgcttgtgtaaaaaatagggtaaggctacgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctttactgcacc 8897776  T
Q  139 aggttgccctt 149  Q
     ||||||||||    
T  8897775 cggttgccctt 8897765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 158
Target Start/End: Original strand, 20869947 - 20870068
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgca 136  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||| |||   | ||   | ||||||||||||||||||||    
T  20869947 aaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggagctttagtgca 20870046  T
Q  137 ccaggttgcccttattgttttt 158  Q
    || |||||||||| || |||||    
T  20870047 ccgggttgcccttttttttttt 20870068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 14018106 - 14018019
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaa-tggtgggacc 99  Q
    ||||||||||   |||||| || || |||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  14018106 tgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaaaacagggtgagactgcgtacaatacactaaattggtgggacc 14018019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 16225045 - 16225155
Alignment:
Q  41 acagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |  |||||||||| || ||| | | ||   | ||||||||||||||||||||||    
T  16225045 acagcctcttatgtaaaaaacagggtaagactgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgcgggagctttagtgcacc 16225144  T
Q  139 aggttgccctt 149  Q
     ||||| ||||    
T  16225145 gggttgtcctt 16225155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 7136653 - 7136528
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcccttacgtatgcgg 123  Q
    |||||| || || ||||| ||||||||||||||| ||||||||| ||||||||||||||| |  ||||||||||||| ||| | | ||   | |||||||    
T  7136653 gttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgg 7136554  T
Q  124 gagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||| |||| |||||    
T  7136553 gagctttagtgcaccgggttaccctt 7136528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 20284210 - 20284075
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaaca--gggtaagactgcgtacaatacactaa--atggtgggaccctttcgcag 108  Q
    |||||||||||  |||||| || || |||||||||||||| ||||||| |  ||||||| ||||||||||||||| ||  |||||||||||| ||| | |    
T  20284210 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgg 20284111  T
Q  109 cccttacgtatgcgggagctttagtgcaccaggttg 144  Q
     || | |||||||||||| ||||||||||| |||||    
T  20284110 accctgcgtatgcgggagttttagtgcaccgggttg 20284075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 24365171 - 24365079
Alignment:
Q  39 aaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagcttt 130  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||| ||| | | || | |||||| |||||||||    
T  24365171 aaacagcctcttgtgtaaaaaatcagggtaaggctgcgaacaatacaccaaatggtgggaccccttcccggaccctgcgtatgtgggagcttt 24365079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 25250523 - 25250658
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagccctt 113  Q
    ||||||||| |||||| || || ||||||||| |||||||||||| |||||| | ||||||||||||||| |  ||||||||||||| ||| |   ||      
T  25250523 aaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaatagggtatggctgcgtacaatacaccaataatggtgggaccccttcccgaacccc 25250622  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | |||||||||| ||||||||||| ||||||||||    
T  25250623 gcatatgcgggagatttagtgcaccgggttgccctt 25250658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 31457171 - 31457306
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || |||||||| |||||||||||||||  |||  ||| ||||||||||||||  ||||||| |||||| ||| ||  ||     
T  31457171 tgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaaaaat-aggaaaaggctgcgtacaatacatcaaatggtaggaccccttcccaaaccc 31457269  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | |||||||||||||| ||||||||| | ||||||||    
T  31457270 tgcgtatgcgggagctctagtgcaccggattgccctt 31457306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 21070839 - 21070703
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaaca---gggtaagactgcgtacaatacactaa--atggtgggaccctttcgca 107  Q
    |||||||||||  |||||| || || |||||||||||||| ||||||| |   ||||||| ||||||||||||||| ||  |||||||||||| ||| |     
T  21070839 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccg 21070740  T
Q  108 gcccttacgtatgcgggagctttagtgcaccaggttg 144  Q
    | || | |||||||||||| ||||||||||| |||||    
T  21070739 gaccctgcgtatgcgggagttttagtgcaccgggttg 21070703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 44781643 - 44781517
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcc 110  Q
    |||||| ||||  |||||| || || ||||| |||||||||||||| |||||||||| ||| |||||||||||   ||||| ||||||||  || ||| |    
T  44781643 tgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaaggctgtgtacaatacaccaaaaatgttgggaccccgtcccagac 44781544  T
Q  111 cttacgtatgcgggagctttagtgcac 137  Q
    | | |||||||||||||||||||||||    
T  44781543 cctgcgtatgcgggagctttagtgcac 44781517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 44742619 - 44742521
Alignment:
Q  50 tgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccc 147  Q
    |||||||||||||||||||| |||||||||||||| | |||||||||||||| |||   | || |||| |||||||||| |||||||||| || |||||    
T  44742619 tgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcttggaccctacggatgcgggagcattagtgcaccggggtgccc 44742521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 389642 - 389768
Alignment:
Q  14 gaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgt--aaaaaacagggtaagactgcgtacaatacactaaatggtggga-ccctttcgcagcc 110  Q
    ||||||||||  |||||| || || ||||| ||||||||||  |||||||||||||||  |||||||||||||| ||||| ||||| ||||||| | | |    
T  389642 gaaaggtcacgggttcaagtcctggaaacaccctcttgtgtcaaaaaaacagggtaaggttgcgtacaatacaccaaatgatgggatccctttc-ctgac 389740  T
Q  111 cttacgtatgcgggagctttagtgcacc 138  Q
    | | |||||||| |||||||||||||||    
T  389741 cctgcgtatgcgagagctttagtgcacc 389768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 17250985 - 17250888
Alignment:
Q  42 cagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||||||||||||||||||||| |||| | ||||||||||||| |  ||||||||||||||||| |   || | ||||||  |||||||||||||||    
T  17250985 cagcctcttgtgtaaaaaacaggttaaggcagcgtacaatacaccaataatggtgggaccctttcccgaaccctgcgtatgaaggagctttagtgcac 17250888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 23286432 - 23286374
Alignment:
Q  41 acagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccct 101  Q
    ||||||||||||||||||  ||||||||  ||||||||||||||| |||||||||||||||    
T  23286432 acagcctcttgtgtaaaa--cagggtaaagctgcgtacaatacaccaaatggtgggaccct 23286374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 138
Target Start/End: Complemental strand, 40605006 - 40604918
Alignment:
Q  49 ttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||||||||||  || ||||  |||||||||||||||||||| |||  ||||| || | |||| |||||||||||||||||||||||||    
T  40605006 ttgtgtaaaaaattggataaggttgcgtacaatacactaaatgatggatcccttccgaaaccct-acgtatgcgggagctttagtgcacc 40604918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 43942348 - 43942411
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccc 100  Q
    |||||||||||| ||| |||||||||||||| |||||||||||||||   ||||||||||||||    
T  43942348 aaacagcctcttatgtcaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccc 43942411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 35105921 - 35106008
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta-aatggtgggacc 99  Q
    |||||||||||  |||||| || || ||||| |||||||||||||| | || ||||| ||||||||||||||| | ||||||||||||    
T  35105921 tgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaagagagtgtaaggctgcgtacaatacaccagaatggtgggacc 35106008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 28407475 - 28407537
Alignment:
Q  87 aaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||| ||| | | || ||||||||||||||||||| |||||| ||||||||||    
T  28407475 aaatggtgggaccccttcccggaccctacgtatgcgggagctttactgcaccgggttgccctt 28407537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 11748297 - 11748366
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaata 82  Q
    ||||| |||||  |||||| || || |||||||||||| |||||||| ||||||||||| ||||||||||    
T  11748297 tgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaagcagggtaagacagcgtacaata 11748366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 20869633 - 20869563
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 85  Q
    |||||||||||  |||||| || || ||||||||||||||||  ||||||||||||| ||| |||||||||||    
T  20869633 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgtgtacaatacac 20869563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 26102578 - 26102651
Alignment:
Q  76 tacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||| |||||||||||||| ||| | | || | | |||||||||||| ||||||||| ||||||||||    
T  26102578 tacaatacaccaaatggtgggaccccttcccggaccctgcttatgcgggagctctagtgcaccgggttgccctt 26102651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 16013511 - 16013590
Alignment:
Q  72 tgcgtacaatacactaaa--tggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||||||  ||||| ||||| ||| ||| || | | |||||||||||||||||||||| ||||| ||||    
T  16013511 tgcgtacaatacactaaaaatggtgcgaccccttcccagaccctgcctatgcgggagctttagtgcaccgggttgtcctt 16013590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 19729382 - 19729462
Alignment:
Q  57 aaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||| ||| | | || | | ||| |||||||| ||||||||    
T  19729382 aaaacagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcatatacgggagctctagtgcac 19729462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 30962910 - 30962847
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgt 76  Q
    ||||||||||| | ||||| || || |||||||||||||||||||||| ||||| || ||||||    
T  30962910 tgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaaatagggttaggctgcgt 30962847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 23000329 - 23000229
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||||||||||||||||||| || ||||||  | | |||||||||| |||||||||||||| |||          || |||||||||||||||||||||    
T  23000329 aaacagcctcttgtgtaaaaa-cacggtaaggttccatacaatacaccaaatggtgggaccccttc---------ccggatgcgggagctttagtgcacc 23000240  T
Q  139 aggttgccctt 149  Q
     ||||||||||    
T  23000239 gggttgccctt 23000229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 149
Target Start/End: Complemental strand, 27468127 - 27468093
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||||| ||||||||||    
T  27468127 cgtatgcgggagctttagtgcaccgggttgccctt 27468093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 36918122 - 36918199
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaat 90  Q
    |||||||||||| |||||| |  || |||||   |||| |||||||||||||||||| ||| ||||||||||| ||||    
T  36918122 tgaaaggtcacatgttcaagttctggaaacaatttcttatgtaaaaaacagggtaaggctgtgtacaatacaccaaat 36918199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 27508010 - 27508046
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgcccttat 151  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  27508010 cgtatgcgggagctttagtgcaccgggttgtccttat 27508046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 42083836 - 42083748
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccc 100  Q
    |||||||||||  |||||| || || ||||||||| ||||||||||||  ||| ||| ||||||||| || | | ||||||||||||||    
T  42083836 tgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatggggcaaggctgcgtacagtataccaaaatggtgggaccc 42083748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 8455450 - 8455317
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||| | | || | |    
T  8455450 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgc 8455351  T
Q  116 gtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||| |||||||||||||||| ||||||||||    
T  8455350 gtatgccggagctttagtgcaccgggttgccctt 8455317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 9671192 - 9671313
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcggga 125  Q
    ||||||||| || ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | || | |||||||||||    
T  9671192 gttcaaatcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcggga 9671289  T
Q  126 gctttagtgcaccaggttgccctt 149  Q
    ||||||||||||| ||||||||||    
T  9671290 gctttagtgcaccgggttgccctt 9671313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 32781425 - 32781298
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||||||| ||||||| ||  | ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| ||     
T  32781425 tgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatggtgggaccccttcccagaccc 32781326  T
Q  113 tacgtatgcgggagctttagtgcaccagg 141  Q
    |  ||||||||||||||| ||||||||||    
T  32781325 tgtgtatgcgggagcttt-gtgcaccagg 32781298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 10543696 - 10543834
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| || || |||| |||||||||||||||||||||||||| |||||||||||||||   |||||||||||||| ||| | | |    
T  10543696 tgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggac 10543795  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||||||||||||||| ||||||||||    
T  10543796 cctgcgtatgcgggagctttagtgcaccgggttgccctt 10543834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 10546160 - 10546297
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaa-aacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccc 111  Q
    |||||||||||  |||||| || || ||||| |||||||| ||||| ||||||||||| ||||||||||||||| |||||||||||||| ||| | | ||    
T  10546160 tgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggacc 10546259  T
Q  112 ttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | |||||||||||||||||||||||| ||||||||||    
T  10546260 ctgcgtatgcgggagctttagtgcaccgggttgccctt 10546297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 11514437 - 11514569
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || ||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||||||| ||| ||| || | |    
T  11514437 aaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaaggctgcgtacaatacaccaaatggtgggaccc-ttcccagaccctgc 11514535  T
Q  116 gtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||||||||||| | ||||||||    
T  11514536 gtatgcgggagctttagtgcaccggattgccctt 11514569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 14444730 - 14444862
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || |||||||||||||||||||| |||||||||| ||| |||| |||||| |||||||||||||| ||| | | || | |    
T  14444730 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-acagggtaaggctgtgtacgatacaccaaatggtgggaccccttcccggaccctgc 14444828  T
Q  116 gtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||||||||||||||||||||||    
T  14444829 gtatgcgggagctttagtgcaccaggttgccctt 14444862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 14530316 - 14530454
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| || || |||||||||||||| |||||||||||||||| || |||||||||||| |  ||||||||||||| ||| | | |    
T  14530316 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctacgtacaatacaccaataatggtgggaccccttcccggac 14530415  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||||||||||||||| ||||||||||    
T  14530416 cctgcgtatgcgggagctttagtgcaccgggttgccctt 14530454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 40762345 - 40762235
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||||||||||||||||||||| ||||||| || |||||||||||| ||||||||||||||||||   | || | |||||| |||||||||||||||||    
T  40762345 aaacagcctcttgtgtaaaaaactgggtaaggctacgtacaatacaccaaatggtgggaccctttcctggaccctgcgtatgtgggagctttagtgcacc 40762246  T
Q  139 aggttgccctt 149  Q
     ||||||||||    
T  40762245 gggttgccctt 40762235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 36871517 - 36871625
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||||||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| ||| | | || | ||||||||||||||||||||||||    
T  36871517 aaacagcctcttgtgtgaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggacc-tgcgtatgcgggagctttagtgcacc 36871614  T
Q  139 aggttgccctt 149  Q
     ||||||||||    
T  36871615 gggttgccctt 36871625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 25632544 - 25632643
Alignment:
Q  50 tgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||| |||| ||||||||||||||| |||||||||||  | ||| |   ||||||||||||||||||||||||||||| ||||||||||    
T  25632544 tgtgtaaaaaacaggataaggctgcgtacaatacaccaaatggtgggattccttcccgaaccttacgtatgcgggagctttagtgcaccgggttgccctt 25632643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 21779396 - 21779262
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || | ||||||||||||||||||  |||||||||  |||||||||||||| |||||||||||||| ||| | | ||     
T  21779396 tgaaaggtcacgggttcaagtcctggagacagcctcttgtgtaaaa--cagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccc 21779299  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  21779298 tgcatatgcgggagctctagtgcaccgggttgccctt 21779262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 23397764 - 23397898
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||||||   |||||| || || |||||||||||||||||||| |  ||||||| || |||||||||||| |||||||||||||| ||| | | ||     
T  23397764 tgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaata--gggtaaggctacgtacaatacaccaaatggtgggaccccttctcggaccc 23397861  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||| |||||||||||| ||||||||| ||||||||||    
T  23397862 tacatatgcgggagctctagtgcaccgggttgccctt 23397898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 12024055 - 12023969
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    |||||||||||  |||||| || || ||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  12024055 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccc 12023969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 23145835 - 23145744
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttc 104  Q
    |||||||||||  |||||| || || |||||| |||||||||||||||||| ||||| ||||||||||||||| || |||||||||||||||    
T  23145835 tgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacaccaattggtgggaccctttc 23145744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 23557625 - 23557534
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttc 104  Q
    |||||||||||  |||||| || || |||||| |||||||||||||||||| ||||| ||||||||||||||| || |||||||||||||||    
T  23557625 tgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacaccaattggtgggaccctttc 23557534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 24200762 - 24200624
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcc 110  Q
    ||||| |||||  |||||| || || ||||||||||||||||||||||||||||||| |||||||||||||||   ||||||||||| || ||| | | |    
T  24200762 tgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaacccttcccggac 24200663  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | |  ||||| | ||||||||||||||| ||||||||||    
T  24200662 cctgagtatgtgagagctttagtgcaccgggttgccctt 24200624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 25249871 - 25249730
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || |||||| |||||||||| ||| ||||||||| ||||||||||||||| ||||||||||| || ||| |   || | |    
T  25249871 aaggtcacgggttcaagtcatggaaacagtctcttgtgtacaaa-cagggtaaggctgcgtacaatacaccaaatggtgggatcccttcccgaaccctgc 25249773  T
Q  116 gtatgcgggagctttagtgcaccaggttgcccttattgttttt 158  Q
    ||||||| ||||||||||||||| |||||||||| || |||||    
T  25249772 gtatgcgtgagctttagtgcaccgggttgcccttttttttttt 25249730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 30826061 - 30826169
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||||||||||||||||||  ||||||||  |||||||||||||| ||||||||| |||| ||| ||| || ||| ||||||||||||||||||||||    
T  30826061 aaacagcctcttgtgtaaaaat-agggtaaggttgcgtacaatacaccaaatggtggaaccc-ttcccagaccctacatatgcgggagctttagtgcacc 30826158  T
Q  139 aggttgccctt 149  Q
    || ||| ||||    
T  30826159 agattgtcctt 30826169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 17668003 - 17668136
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || ||| | ||||||||||||||| ||||||||| ||||||||||||||| ||||||||| |||| ||| |   || | |    
T  17668003 aaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaatggtggaaccccttctcgaaccctgc 17668102  T
Q  116 gtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||  ||||||||||||||||| ||||||||||    
T  17668103 gtatatgggagctttagtgcaccgggttgccctt 17668136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 19977850 - 19977715
Alignment:
Q  14 gaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccctt 113  Q
    ||||||||||  |||||| |  || |||||||||||| ||||||||| ||| ||||  |||||||||||||| ||||||||||| || ||| |   ||||    
T  19977850 gaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaataggataaggttgcgtacaatacaccaaatggtgggatcccttcccgaacctt 19977751  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
      ||||||||||||||||||||||||| || |||||    
T  19977750 gtgtatgcgggagctttagtgcaccagattaccctt 19977715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 14544087 - 14544200
Alignment:
Q  39 aaacagcctcttgtgta-aaaaacagggtaagactgcgtacaata--cactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgc 135  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||  ||  ||||||| |||||| |||   | || | |||||||||||||||||||||    
T  14544087 aaacagcctcttgtgtagaaaaacagggtaagactgcgtgcaataaccaaaaaatggtcggaccccttccgggaccctgcgtatgcgggagctttagtgc 14544186  T
Q  136 accaggttgccctt 149  Q
    |||| |||||||||    
T  14544187 accaagttgccctt 14544200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 138
Target Start/End: Complemental strand, 31158552 - 31158451
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgca 136  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||| ||   |||||||||||||| ||| ||| || | ||||||||||||||||||| ||    
T  31158552 aaacagcctcttgcgtaaaaaacagggtaagattgcatacaataaaccaaaaatggtgggaccccttcccagaccctgcgtatgcgggagctttagtaca 31158453  T
Q  137 cc 138  Q
    ||    
T  31158452 cc 31158451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 4516462 - 4516354
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||| || ||||||||||| ||| | | || | |||||| || |||||||||| |||    
T  4516462 aaacagcctcttgtgtaaaaaacagggcaacgctgcgtacaatacaccaattggtgggaccccttcccggaccctgcgtatgtggaagctttagtgtacc 4516363  T
Q  139 aggttgccc 147  Q
     || |||||    
T  4516362 gggctgccc 4516354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 17896283 - 17896394
Alignment:
Q  39 aaacagcctcttgtgtaaaaaac-agggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||| ||||||||||||||||  |||||||| |||||||||||| || |||||||||||||| ||| | | || | |||||| |||||||||||||||     
T  17896283 aaacaacctcttgtgtaaaaaaatagggtaaggctgcgtacaatataccaaatggtgggaccccttctcggaccctgcgtatgtgggagctttagtgcat 17896382  T
Q  138 caggttgccctt 149  Q
    |  |||||||||    
T  17896383 cgagttgccctt 17896394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 21377210 - 21377123
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    |||||||| || ||||||| || |  ||||| ||||||||||||||||||||||||| ||| ||||||| ||| ||||||||||||||    
T  21377210 tgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaaacagggtaaggctgggtacaatgcaccaaatggtgggaccc 21377123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 25079829 - 25079718
Alignment:
Q  39 aaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||| |||||||||||||||| || ||||||  ||||||||||||||  ||||||||||||| ||| | | || | |||||||  ||||||||||||||    
T  25079829 aaacaacctcttgtgtaaaaaaacaaggtaaggatgcgtacaatacaccgaatggtgggaccccttcccggaccctgcgtatgcaagagctttagtgcac 25079730  T
Q  138 caggttgccctt 149  Q
    | ||||||||||    
T  25079729 cgggttgccctt 25079718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 39914417 - 39914307
Alignment:
Q  39 aaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||| |||||||||||||||| |||||||||  || |||||||||||  ||||||||||||| ||| | | || | ||||||||||||||||||||||     
T  39914417 aaacaacctcttgtgtaaaaaaacagggtaaggatgtgtacaatacaccgaatggtgggaccccttc-ctgaccctgcgtatgcgggagctttagtgcat 39914319  T
Q  138 caggttgccctt 149  Q
    | ||||||||||    
T  39914318 cgggttgccctt 39914307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 99400 - 99281
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || |  ||||||||||||||  |||||||| || ||| ||||||||||||||| ||||||||| |||| ||| ||| ||     
T  99400 tgaaaggtcacgggttcaagtcctagaaacagcctcttgt--aaaaaacatggcaaggctgcgtacaatacaccaaatggtggaaccccttctcagaccc 99303  T
Q  113 tacgtatgcgggagctttagtg 134  Q
    |  |||||||||||||||||||    
T  99302 tgtgtatgcgggagctttagtg 99281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 17623588 - 17623698
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||||||| ||||||||| |||| ||| |    | | |||||| || |||||||||||||     
T  17623588 aaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaatggtggaaccccttcccgaatcctgcgtatgtggaagctttagtgcact 17623687  T
Q  139 aggttgccctt 149  Q
     ||||||||||    
T  17623688 gggttgccctt 17623698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 44643563 - 44643657
Alignment:
Q  55 aaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||| ||||| |||||||||||  || |||||||||||||| ||| ||| || | ||||||||||||| |||||||||| || |||||||    
T  44643563 aaaaaacagagtaaggctgcgtacaatgtaccaaatggtgggaccccttcccagaccctgcgtatgcgggagccttagtgcaccgggctgccctt 44643657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 149
Target Start/End: Original strand, 27573646 - 27573754
Alignment:
Q  40 aacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacca 139  Q
    |||||||||||||||| ||| || |||||| ||||||||||||||| ||||||||| ||| |||| ||  || |  ||||| ||||||||||||||| |     
T  27573646 aacagcctcttgtgtataaa-catggtaaggctgcgtacaatacaccaaatggtggaaccatttcccaaaccctgtgtatgtgggagctttagtgcatcg 27573744  T
Q  140 ggttgccctt 149  Q
    ||||||||||    
T  27573745 ggttgccctt 27573754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 40417005 - 40416872
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || ||||| |||||||| |||||||||||| ||| ||| ||||||||||| || || |||||||||||    | || | |    
T  40417005 aaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggctgtgtacaatacaccaattgatgggacccttttttggaccctgc 40416906  T
Q  116 gtatgcgggagctttagtgcaccaggttgccctt 149  Q
     |||||| ||||||||||||||| ||||||||||    
T  40416905 atatgcgagagctttagtgcaccgggttgccctt 40416872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 5450283 - 5450371
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    |||||||||||  |||||| || || ||||| |||||||||||||||| || |||||| ||||||||||||||| ||| ||||||||||    
T  5450283 tgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggtaaggctgcgtacaatacaccaaagggtgggaccc 5450371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 7214532 - 7214667
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcc 110  Q
    ||||||||||   |||||| || || |||||| ||||||||||||| |||||||||| |||||||||||||||   |||||||| || || ||| | | |    
T  7214532 tgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgcgtacaatacacaaaaaatggtgagatcccttctcggac 7214631  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgcc 146  Q
      | |||||||| ||| |||||||||||||||||||    
T  7214632 actgcgtatgcgagagttttagtgcaccaggttgcc 7214667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 45235955 - 45235820
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaa-aacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccc 111  Q
    |||||| |||| ||||||| || |  |||||| ||||| ||||||| || |||||||| || |||  ||||||| |||||||||||||| ||  ||| ||    
T  45235955 tgaaagatcacgagttcaagtcctagaaacagtctcttctgtaaaataatagggtaaggctacgtgtaatacacaaaatggtgggaccccttaccagacc 45235856  T
Q  112 ttacgtatgcgggagctttagtgcaccaggttgccc 147  Q
     ||||||||| |||||||||||| |||| |||||||    
T  45235855 ctacgtatgcaggagctttagtgtaccaagttgccc 45235820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 44521510 - 44521392
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  ||||||||| || |||||  ||||||||||||||||| |||||| |||| || ||||||| |||||| |||| || ||| ||| | |    
T  44521510 tgaaaggtcacgcgttcaaatcttggaaacaatctcttgtgtaaaaaacaaggtaaggctgcatataatacaccaaatggcgggagcccttcccagacat 44521411  T
Q  113 tacgtatgcgggagcttta 131  Q
    | | ||| |||||||||||    
T  44521410 tgcatatacgggagcttta 44521392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 5841052 - 5841164
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgca 136  Q
    ||||||||| |||||||||||| ||||||||  |||||||||||||  |  ||||||||||||| ||| | | ||   | ||||||||||||||||||||    
T  5841052 aaacagccttttgtgtaaaaaatagggtaaggatgcgtacaatacatcaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgca 5841151  T
Q  137 ccaggttgccctt 149  Q
    ||  |||||||||    
T  5841152 ccgagttgccctt 5841164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 19614990 - 19615059
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaata 82  Q
    |||||||||||  |||||| || |  ||||| |||||||| |||||||||||||||||||||||||||||    
T  19614990 tgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgtacaata 19615059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 22371059 - 22371139
Alignment:
Q  17 aggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    |||||||  |||||| || || |||||||||| |||   |||||||||||||| ||||||||||||||| ||||||||||||||    
T  22371059 aggtcacgggttcaagtcctggaaacagcctcgtgt---aaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccc 22371139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 12315787 - 12315712
Alignment:
Q  14 gaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaat 90  Q
    |||||||||| ||||||| || || ||||||| |||| | |||||||||||||||||||| ||||||||||| ||||    
T  12315787 gaaaggtcacgagttcaagtcatggaaacagcttcttat-taaaaaacagggtaagactgtgtacaatacaccaaat 12315712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 29420026 - 29419970
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaag 69  Q
    ||||||||||| ||||||| || || ||||| |||||||||||||||||||||||||    
T  29420026 tgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaag 29419970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 26684759 - 26684632
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacag-cctcttgtgtaaaaaac-agggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcc 110  Q
    |||||||||| | ||| || || || |||||| ||||||||||||||||  | |||||| |||||||||||| ||||||||||||||||  ||| |   |    
T  26684759 tgaaaggtcaaaggtttaagtcctgaaaacagacctcttgtgtaaaaaaatatggtaaggctgcgtacaatatactaaatggtgggacctcttcccgaac 26684660  T
Q  111 cttacgtatgcgggagctttagtgcacc 138  Q
    | | ||||||||||||||||| ||||||    
T  26684659 cctgcgtatgcgggagctttaatgcacc 26684632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 137
Target Start/End: Original strand, 24890451 - 24890533
Alignment:
Q  55 aaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    |||||||| |||||| |||| |||||||||| || ||||||||||| ||| | | || | ||||||| |||||||||||||||    
T  24890451 aaaaaacaaggtaaggctgcatacaatacaccaattggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcac 24890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 33795283 - 33795400
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtac-aatacactaaatggtgggaccctttcgcagccc 111  Q
    |||||||||||  |||||| ||  | ||||| ||||||| ||||||||||||||||| |||||||| |||||||   |||||||||||| ||| ||| ||    
T  33795283 tgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggctgcgtacaaatacac-ctatggtgggaccccttcccagacc 33795381  T
Q  112 ttacgtatgcgggagcttt 130  Q
     |  |||||||||||||||    
T  33795382 ctgtgtatgcgggagcttt 33795400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 13245181 - 13245096
Alignment:
Q  64 ggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||| ||||||||| |||||||||||||||||||| ||| | | || | | ||| |||||||||||||| | | ||||||||||    
T  13245181 ggtaaggctgcgtacattacactaaatggtgggaccccttcccggaccatgcatatacgggagctttagtgtatcgggttgccctt 13245096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 138
Target Start/End: Original strand, 17471572 - 17471673
Alignment:
Q  39 aaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgca 136  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| | | ||||| || ||||| ||| | | || | | |||||||||| |||||||||    
T  17471572 aaacagcctcttgtgtaaaaaaacaggataagactgcgtacaatataccaaaatgatgagaccccttccctgaccctgcctatgcgggagttttagtgca 17471671  T
Q  137 cc 138  Q
    ||    
T  17471672 cc 17471673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 31821478 - 31821393
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    ||||||||||| ||||||| ||||  ||||||||   ||||||||||| ||||||||  || ||||||||||| ||||| ||||||||    
T  31821478 tgaaaggtcacgagttcaagtcgtagaaacagccg--tgtgtaaaaaatagggtaaggttgtgtacaatacaccaaatgatgggaccc 31821393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 40579783 - 40579747
Alignment:
Q  116 gtatgcgggagctttagtgcaccaggttgcccttatt 152  Q
    ||||||||||||||||||||||| |||||||||||||    
T  40579783 gtatgcgggagctttagtgcaccgggttgcccttatt 40579747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 82
Target Start/End: Complemental strand, 15296518 - 15296475
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaata 82  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||    
T  15296518 aaacagcctgttgtgtaaaatacagggtaaggctgcgtacaata 15296475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 138
Target Start/End: Complemental strand, 24860067 - 24860000
Alignment:
Q  71 ctgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||||||||||||| ||||||| | |||| ||| | | || | ||||||||||||||||||||||||    
T  24860067 ctgcgtacaatacaccaaatggtagaaccccttctcggaccctgcgtatgcgggagctttagtgcacc 24860000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 149
Target Start/End: Original strand, 8575995 - 8576029
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||| ||||||||||||||||||||||||||||    
T  8575995 cgtatgtgggagctttagtgcaccaggttgccctt 8576029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 149
Target Start/End: Original strand, 22371212 - 22371246
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||||| ||||||||||    
T  22371212 cgtatgcgggagctttagtgcaccgggttgccctt 22371246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 17705496 - 17705565
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 85  Q
    ||||||||  |||||| || || |||| |||||||||||||| ||||| ||||| ||| |||||||||||    
T  17705496 aaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaacaacagagtaaggctgtgtacaatacac 17705565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 58975 - 59113
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| || || |||||||||||||| ||||||||||||||||||||||||||||||||   |||||||||||||| ||| ||| |    
T  58975 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactgcgtacaatacaccaaaaatggtgggaccccttcccagac 59074  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
      | |||||||||||||||||||||| | ||||||||||    
T  59075 tctgcgtatgcgggagctttagtgcatcgggttgccctt 59113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 29355994 - 29355856
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| || || |||||||||||||||||| |||||||||||| ||||||||||||||| |  ||||||||||||| ||| | | |    
T  29355994 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggac 29355895  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||||||||||||||| ||||||||||    
T  29355894 cctgcgtatgcgggagctttagtgcaccgggttgccctt 29355856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 12222054 - 12221915
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| || || ||||||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||| ||| | | |    
T  12222054 tgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggac 12221955  T
Q  111 cttacgtatgcgggagc-tttagtgcaccaggttgccctt 149  Q
    | | ||||||||||||| ||||||||||| ||||||||||    
T  12221954 cctgcgtatgcgggagcttttagtgcaccgggttgccctt 12221915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 1354892 - 1354758
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | ||     
T  1354892 tgaaaggtcactggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc 1354795  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  1354794 tgcatatgcgggagctctagtgcaccgggttgccctt 1354758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 9161121 - 9161258
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaa--atggtgggaccctttcgcagcc 110  Q
    |||||||||||| |||||| || || ||||||||||||||||||||| ||| ||||| ||||||||||||||  ||  |||||||||||| ||| | | |    
T  9161121 tgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaa-cagagtaaggctgcgtacaatacatcaataatggtgggaccccttctcggac 9161219  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | ||||||||| |||||||||||||||||||||||||    
T  9161220 cctgcgtatgcggaagctttagtgcaccaggttgccctt 9161258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 1346962 - 1347096
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || |||||||| |||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | ||     
T  1346962 tgaaaggtcacgggttcaagtcctggaaacagccacttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc 1347059  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  1347060 tgcatatgcgggagctctagtgcaccgggttgccctt 1347096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 32728293 - 32728158
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||||||||  ||||| |  || ||||| |||||| |||||||||||||||||||||| |||||||| || |||| || || ||||||| ||| ||     
T  32728293 tgaaaggtcacagattcaagttttggaaacaacctcttatgtaaaaaacagggtaagactgtgtacaatataccaaatagt-ggtccctttcccagaccc 32728195  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  32728194 tacgtatgcgggaactttagtgcaccatgttgccctt 32728158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 143
Target Start/End: Complemental strand, 3815214 - 3815084
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||| |||||  |||||| || || |||||| || |||||||||||| | |||| ||||||||||||||||| |||||||||||||||||| |   ||     
T  3815214 tgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaaatatggtacgactgcgtacaatacaccaaatggtgggaccctttcccgaaccc 3815115  T
Q  113 tacgtatgcgggagctttagtgcaccaggtt 143  Q
    ||||||||||| |||||||||||||| ||||    
T  3815114 tacgtatgcggaagctttagtgcaccgggtt 3815084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 18277328 - 18277194
Alignment:
Q  15 aaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccctta 114  Q
    |||||||||  ||||||||| || ||||||||||||||||||||| |||||||||  || |||||  |||| |||||||||||||| |||  || |  ||    
T  18277328 aaaggtcacgggttcaaatcttggaaacagcctcttgtgtaaaaatcagggtaaggttgagtacagaacaccaaatggtgggaccccttcctagactcta 18277229  T
Q  115 cgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||||| |||||| ||||| ||||    
T  18277228 cgtatgcgggagctttactgcaccgggttgtcctt 18277194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 20400665 - 20400755
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggacccttt 103  Q
    |||||||||||| |||||| |  || |||||  |||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  20400665 tgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaagactgcgtacagtacactaaatagcgggacccttt 20400755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 7947509 - 7947384
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagccc 111  Q
    |||||||||||  |||||| || || ||||| |||| |||||||||| ||||||||| |||||||||||||| | |||||||||| ||| ||| | | ||    
T  7947509 tgaaaggtcaccggttcaactcctggaaacaacctcctgtgtaaaaaccagggtaaggctgcgtacaatacaccaaaatggtgggcccccttcccggacc 7947410  T
Q  112 ttacgtatgcgggagctttagtgcac 137  Q
    || |||||| ||||||||||||||||    
T  7947409 ttgcgtatgtgggagctttagtgcac 7947384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 1941876 - 1941940
Alignment:
Q  36 tgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  1941876 tgtaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccgaatggtgggaccc 1941940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 2166549 - 2166411
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| || || ||||| |||||||||||||| ||||| ||||  |||||||||||||| |  ||||||||||||| ||| | | |    
T  2166549 tgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataatggtgggaccccttcccggac 2166450  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | ||  ||| |||||||||||||||||| ||||||||||    
T  2166449 cctatatattcgggagctttagtgcaccgggttgccctt 2166411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 2178182 - 2178044
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| || || ||||| |||||||||||||| ||||| ||||  |||||||||||||| |  ||||||||||||| ||| | | |    
T  2178182 tgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataatggtgggaccccttcccggac 2178083  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | ||  ||| |||||||||||||||||| ||||||||||    
T  2178082 cctatatattcgggagctttagtgcaccgggttgccctt 2178044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 26097184 - 26097292
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||  ||||||| ||| | | || | | |||||||||||| |||||||||    
T  26097184 aaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatgaagggaccccttcccggaccctgcatatgcgggagctctagtgcacc 26097281  T
Q  139 aggttgccctt 149  Q
     ||||||||||    
T  26097282 gggttgccctt 26097292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 25557749 - 25557857
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||  || |||| ||| | | || | | |||||||||||| |||||||||    
T  25557749 aaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatgaaggaaccccttcccggaccctgcatatgcgggagctctagtgcacc 25557846  T
Q  139 aggttgccctt 149  Q
     ||||||||||    
T  25557847 gggttgccctt 25557857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 6024257 - 6024303
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 85  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  6024257 aaacagcctcttgtgtaaaaaacatggtaagactgcgtacaatacac 6024303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 23240959 - 23240837
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||| || ||| || || ||||||||||||||||  |||||||||||||  ||||||||||| || || ||||||||||| |||   | |      
T  23240959 tgaaaggtcacaggtgcaagtcctggaaacagcctcttgtgt--aaaacagggtaagtttgcgtacaatataccaattggtgggaccccttctaggacaa 23240862  T
Q  113 tacgtatgcgggagctttagtgcac 137  Q
    | |||||||||||||||||||||||    
T  23240861 tgcgtatgcgggagctttagtgcac 23240837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 33138844 - 33138921
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggacccttt 103  Q
    |||||| || || ||||| |||||||| |||||||||| ||||| | ||||||||||||| |||||||||||||||||    
T  33138844 gttcaagtcctggaaacaacctcttgtataaaaaacagagtaaggccgcgtacaatacaccaaatggtgggacccttt 33138921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 12889424 - 12889496
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 85  Q
    |||||||||||| |||||| || || |||||||||||||||| |||||||||| ||| |||| ||||||||||    
T  12889424 tgaaaggtcacaggttcaagtcttgaaaacagcctcttgtgttaaaaacagggcaaggctgcatacaatacac 12889496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 24097579 - 24097711
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||||||| |||| || || |  || ||||||||||| |||||||||||||||| |||| ||||    || |||||||||||||| ||| | | ||     
T  24097579 tgaaaggtcacgagtttaagtcctcgaaccagcctcttgtataaaaaacagggtaaggctgcttaca----accaaatggtgggaccccttcccggaccc 24097674  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | ||||||||| ||||||||||  |||||||||||||    
T  24097675 tgcgtatgcggaagctttagtgtcccaggttgccctt 24097711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 8409241 - 8409311
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatac 83  Q
    |||||||||||   ||||| || || |||| |||||||||||||||||||||||||| |||||||||||||    
T  8409241 tgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggtaaggctgcgtacaatac 8409311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 12885967 - 12886047
Alignment:
Q  71 ctgcgtacaatacactaaa--tggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||| |||  ||||||||||| ||| ||| || | |||||| ||||||||||||||||| ||||||||||    
T  12885967 ctgcgtacaatacacaaaaaatggtgggaccccttcccagaccctgcgtatgtgggagctttagtgcaccgggttgccctt 12886047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 24751176 - 24751135
Alignment:
Q  48 cttgtgtaaaaaacagggtaagactgcgtacaatacactaaa 89  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  24751176 cttgtgtaaaaaatagggtaagactgcgtacaatacactaaa 24751135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 32579437 - 32579553
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcggga 125  Q
    |||||| || || ||||||||||| || ||||||  | |||||| ||||||||||||| | |||||||||||||| ||| ||| || | | |||||||||    
T  32579437 gttcaagtcctggaaacagcctctggtataaaaat-acggtaagcctgcgtacaataccccaaatggtgggaccccttcccagaccctgcatatgcggga 32579535  T
Q  126 gctttagtgcaccaggtt 143  Q
    |||||||| | |||||||    
T  32579536 gctttagtactccaggtt 32579553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 383837 - 383761
Alignment:
Q  73 gcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||| |||| ||||||||| ||| ||| || | ||||||||||||||| ||| |||| ||||||||||    
T  383837 gcgtacaatacaccaaattgtgggaccccttctcagaccctgcgtatgcgggagcttcagtccaccgggttgccctt 383761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 14553511 - 14553626
Alignment:
Q  15 aaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaa--tggtgggaccctttcgcagccct 112  Q
    |||||||||| |||||| || || ||| ||| |||||||||||||| |||||||| ||| ||| ||||||| |||  ||||||||||| |||| || ||     
T  14553511 aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaatagggtaaggctgtgtataatacaccaaaactggtgggaccccttcgtagaccc 14553610  T
Q  113 tacgtatgcgggagct 128  Q
    |  |||||||||||||    
T  14553611 tgtgtatgcgggagct 14553626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 13905116 - 13905026
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttc 104  Q
    |||||||||||  | |||| || || ||||  ||||||||||||||||||||||||| |||| |||||| ||| ||||||| ||||||||||    
T  13905116 tgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaaggctgcatacaattcaccaaatggt-ggaccctttc 13905026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 17432338 - 17432482
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaac------agggtaagactgcgtacaatacact--aaatggtgggaccctttc 104  Q
    |||||||||||| |||||| || || ||||| | |||||||||||||||      |||||||| ||| ||||||||||||  |||||||| |||| ||||    
T  17432338 tgaaaggtcacaggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaagggtaaggctgtgtacaatacactaaaaatggtgagaccttttc 17432437  T
Q  105 gcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | |  | |  | ||||||||||||||||||||| ||||||||||    
T  17432438 ccggatcctgtgcatgcgggagctttagtgcaccgggttgccctt 17432482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 28007628 - 28007711
Alignment:
Q  15 aaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    |||||||||  |||||| || || ||| ||||||||||||||||  |||||| || ||||||||||||||| ||||| ||||||||    
T  28007628 aaaggtcacgggttcaagtcctggaaagagcctcttgtgtaaaa--cagggtcaggctgcgtacaatacaccaaatgctgggaccc 28007711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 15866174 - 15866052
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||||||   |||||| || || ||||||||||||  ||||||||||||||||  ||||||  ||||||| |||||||||||||| ||| | | ||     
T  15866174 tgaaaggtcatgggttcaattcctggaaacagcctcttaagtaaaaaacagggtaaagctgcgt--aatacaccaaatggtgggaccccttcccggaccc 15866077  T
Q  113 tacgtatgcgggagctttagtgcac 137  Q
    | ||| ||||||| || ||||||||    
T  15866076 tgcgtttgcgggatctatagtgcac 15866052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 23930205 - 23930128
Alignment:
Q  72 tgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||| | |||||||||||| ||| | | || | | ||||||||||||||||||||||  |||||||||    
T  23930205 tgcgtacaatacaccagatggtgggaccccttcacggaccctgcttatgcgggagctttagtgcaccgagttgccctt 23930128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 3116212 - 3116121
Alignment:
Q  69 gactgcgtacaatacactaaa--tggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgcccttattgttttt 158  Q
    ||||||| ||||||||| |||  ||||||||||| ||| | | |||| ||||||||||||||||||| |||| | |||||||| || |||||    
T  3116212 gactgcgcacaatacaccaaaaatggtgggaccccttctcggaccttgcgtatgcgggagctttagtacaccggattgcccttttttttttt 3116121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 9671196 - 9671161
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgc 74  Q
    ||||||||||||||||||||||||||||||| ||||    
T  9671196 aaacagcctcttgtgtaaaaaacagggtaaggctgc 9671161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 13267788 - 13267859
Alignment:
Q  78 caatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||| |||||||||||||| |||   | || | ||||||||||||||| |||||||| ||||||||||    
T  13267788 caatacaccaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccgggttgccctt 13267859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 6808496 - 6808538
Alignment:
Q  116 gtatgcgggagctttagtgcaccaggttgcccttattgttttt 158  Q
    ||||||||||||||||||||||| |||||||||| || |||||    
T  6808496 gtatgcgggagctttagtgcaccgggttgccctttttcttttt 6808538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 12892111 - 12892143
Alignment:
Q  117 tatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||| ||||||||||    
T  12892111 tatgcgggagctttagtgcaccgggttgccctt 12892143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 13628368 - 13628316
Alignment:
Q  39 aaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaat 90  Q
    |||||||||||||| ||||||| || ||||| | |||||||||||||||||||    
T  13628368 aaacagcctcttgtttaaaaaaacaaggtaaaattgcgtacaatacactaaat 13628316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 24448891 - 24449034
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || ||||||||| |||||||||||| |||||||| ||||||||||||||| |||||||||||||| ||| | | || | |    
T  24448891 aaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgc 24448990  T
Q  116 gtatgcgggagctttagtgcaccaggttgcccttattgttttta 159  Q
    |||||| |||||||||||||||| |||||||||| || ||||||    
T  24448991 gtatgcaggagctttagtgcaccgggttgcccttttttttttta 24449034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 38879579 - 38879717
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcc 110  Q
    |||||||||||  |||||| || || |||||||||||||| |||||||||||||||| ||||||||||||||| |  ||||||||||||| ||| | | |    
T  38879579 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggac 38879678  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||||||||||||||| ||||||||||    
T  38879679 cctgcgtatgcgggagctttagtgcaccgggttgccctt 38879717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 16880757 - 16880648
Alignment:
Q  40 aacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacca 139  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||  ||| | | || | ||||||||||||||||||||||||     
T  16880757 aacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgtgaccacttcccggaccatgcgtatgcgggagctttagtgcaccg 16880658  T
Q  140 ggttgccctt 149  Q
    |||| |||||    
T  16880657 ggtttccctt 16880648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 32703422 - 32703556
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | ||     
T  32703422 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc 32703519  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  32703520 tgcatatgcgggagctctagtgcaccgggttgccctt 32703556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 28516571 - 28516434
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagccc 111  Q
    |||||||||||  |||||| || || ||||| |||||||||||||||||||| || | |||||||||||||| | |||||||||||||| ||| ||| ||    
T  28516571 tgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctagggctgcgtacaatacatcaaaatggtgggacccattcccagacc 28516472  T
Q  112 ttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | || |||| |||||||||||| ||||||||||||||    
T  28516471 ctgcgcatgcaggagctttagtggaccaggttgccctt 28516434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 41014320 - 41014452
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| |||   | ||   |    
T  41014320 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaatggtgggaccccttcctggaccccgc 41014418  T
Q  116 gtatgcgggagctttagtgcaccaggttgccctt 149  Q
     |||||||||||||||||||||| ||||||||||    
T  41014419 atatgcgggagctttagtgcaccgggttgccctt 41014452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 27328750 - 27328875
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcc 110  Q
    |||||||||||| |||||| || || |||||| |||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||| ||| |   |    
T  27328750 tgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgaac 27328849  T
Q  111 cttacgtatgcgggagctttagtgca 136  Q
    | | ||||||||||||||||| ||||    
T  27328850 cctgcgtatgcgggagctttaatgca 27328875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 4619240 - 4619105
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagccctt 113  Q
    ||||||||  |||||| || || ||| ||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||| ||| | | ||      
T  4619240 aaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggacccc 4619141  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | |||||| ||||||||||||||| ||||||||||    
T  4619140 gcatatgcgagagctttagtgcaccgggttgccctt 4619105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 8170118 - 8169985
Alignment:
Q  14 gaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccctt 113  Q
    ||||||||||  |||||| || || ||||||||| ||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | || |    
T  8170118 gaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccct 8170021  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | |||||||||| || |||||||| ||||||||||    
T  8170020 gcatatgcgggagtttcagtgcaccgggttgccctt 8169985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 43334200 - 43334338
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaa--tggtgggaccctttcgcagc 109  Q
    |||||||||||  |||||| || || |||||||||| ||||||||||| ||||||||| ||||||||||||||| |||  ||||||||||| ||| | |     
T  43334200 tgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccgga 43334299  T
Q  110 ccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    || | || ||||||||||||||||||||| ||||||||||    
T  43334300 ccctgcg-atgcgggagctttagtgcaccgggttgccctt 43334338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 7097870 - 7097761
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||| |||||||| ||||| ||| |   || | ||||||||||||||||||||||||    
T  7097870 aaacagcctcttgtgtaaaaa-cagggtaaggttgcgtacaatacaccaaatggtgagaccccttcccgaaccctgcgtatgcgggagctttagtgcacc 7097772  T
Q  139 aggttgccctt 149  Q
    | | |||||||    
T  7097771 atgctgccctt 7097761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 149
Target Start/End: Complemental strand, 13801877 - 13801768
Alignment:
Q  42 cagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacca 139  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||| ||| | | ||   | |||||| |||||||||||||||     
T  13801877 cagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagctttagtgcaccg 13801778  T
Q  140 ggttgccctt 149  Q
    ||||||||||    
T  13801777 ggttgccctt 13801768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 35710311 - 35710445
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || |||||||||||||||||||| |  ||||||| |||||| |||||||| |||||||||||||| ||| | |  |     
T  35710311 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaata--gggtaaggctgcgttcaatacaccaaatggtgggaccccttcccggaaca 35710408  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  35710409 tgcatatgcgggagctctagtgcaccgggttgccctt 35710445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 19143071 - 19142956
Alignment:
Q  21 cacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatg 120  Q
    |||| |||||| || || ||||| ||||||||||||||| ||||||||| ||||||||| ||||| |||||||||||||| ||| | | || | ||||||    
T  19143071 cacaggttcaagtcctggaaacaacctcttgtgtaaaaa-cagggtaaggctgcgtacagtacaccaaatggtgggaccccttcccggaccatgcgtatg 19142973  T
Q  121 cgggagctttagtgcac 137  Q
    |||||| ||||||||||    
T  19142972 cgggagatttagtgcac 19142956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 43574637 - 43574729
Alignment:
Q  46 ctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||||||| ||||||||||||| |||||||||||| || |||||||||||||| ||| | | || | |||||||||||||||||| |||||    
T  43574637 ctcttgtgtagaaaacagggtaaggctgcgtacaatataccaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagagcacc 43574729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 29334419 - 29334530
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta-aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||| ||| | | || | |||||| |||| ||||| |||||    
T  29334419 aaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccagaatggtgggacccattcccggaccctgcgtatgtgggatctttaatgcac 29334518  T
Q  138 caggttgccctt 149  Q
    | || |||||||    
T  29334519 cgggctgccctt 29334530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 30006349 - 30006456
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||| |||||| | |||| ||||||||||| ||| ||||| |||||||||||||||||||| ||| | |  | || |||||||||||||||||||||||    
T  30006349 aaacaacctcttatataaacaacagggtaaggctgtgtacattacactaaatggtgggaccccttcccggggcctatgtatgcgggagctttagtgcacc 30006448  T
Q  139 aggttgcc 146  Q
     |||||||    
T  30006449 gggttgcc 30006456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 7368422 - 7368528
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||| || ||||||||||| ||| | | || | | |||| ||||||| |||||||||    
T  7368422 aaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaattggtgggaccccttcccggaccctgcatatgtgggagctctagtgcacc 7368519  T
Q  139 aggttgccc 147  Q
     ||||||||    
T  7368520 gggttgccc 7368528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 20135628 - 20135740
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgca 136  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||| |  ||||||||||||| ||| | | ||   | ||||| ||||||| ||||||    
T  20135628 aaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcaggagcttcagtgca 20135727  T
Q  137 ccaggttgccctt 149  Q
    || ||||||||||    
T  20135728 ccgggttgccctt 20135740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 22187283 - 22187421
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcc 110  Q
    |||||||||||  ||| || || || |||||||||||||||||||||||| | ||||||||||||||||||||   |||   || ||||| ||| ||  |    
T  22187283 tgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaaacatgataagactgcgtacaatacaccaaaaacaatgagaccccttcccaaac 22187382  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | ||| ||||| |||||||||||||| ||||||||||||    
T  22187383 cctacatatgcaggagctttagtgcatcaggttgccctt 22187421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 12006441 - 12006328
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaa--atggtgggaccctttcgcagcccttacgtatgcgggagctttagtgca 136  Q
    ||||| |||||| ||||||||| |||||||| || | |||||||||| ||  |||||||||||| ||| ||| || | | ||||||||||||||||||||    
T  12006441 aaacaacctcttatgtaaaaaatagggtaaggctccatacaatacaccaataatggtgggaccccttcccagaccctgcctatgcgggagctttagtgca 12006342  T
Q  137 ccaggttgccctta 150  Q
    ||  ||||||||||    
T  12006341 ccgtgttgccctta 12006328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 16957374 - 16957448
Alignment:
Q  75 gtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||| |||||||||||||| ||| | | || | |||||||||||||||||||||||| ||||||||||    
T  16957374 gtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctt 16957448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 2838803 - 2838890
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagc 127  Q
    ||||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||| || ||| | | || | |||||||||||||    
T  2838803 aaacagcatcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaatggtgggatcccttctcggaccctgcgtatgcgggagc 2838890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 34154903 - 34154815
Alignment:
Q  61 cagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||| | | || | | ||||||| |||| ||||||||| ||||||||||    
T  34154903 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcggtagctctagtgcaccgggttgccctt 34154815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 42924971 - 42924899
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 85  Q
    ||||||||||| ||||||| || || ||||| | |||||||||||||||||||||||  ||||||||||||||    
T  42924971 tgaaaggtcacgagttcaagtcctgaaaacaacatcttgtgtaaaaaacagggtaaggttgcgtacaatacac 42924899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 34074699 - 34074620
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatgg 92  Q
    ||||||||||||||||||| || |  ||||||||||||||||||||||||  |||||  ||||| |||||||| ||||||    
T  34074699 tgaaaggtcacaagttcaagtcctagaaacagcctcttgtgtaaaaaacacagtaaggttgcgttcaatacaccaaatgg 34074620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 1405188 - 1405276
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttc 104  Q
    ||||||||  |||||| || || ||||| |||||| | ||||||| || |||||  |||||||||||||| ||||||||||||||||||    
T  1405188 aaggtcacgggttcaagtcctggaaacaacctcttatataaaaaatagagtaagtttgcgtacaatacaccaaatggtgggaccctttc 1405276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 39801591 - 39801647
Alignment:
Q  90 tggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgcc 146  Q
    ||||||||||| ||| ||| || |||||||||||||||||||||||||| |||||||    
T  39801591 tggtgggaccccttcccagaccctacgtatgcgggagctttagtgcaccgggttgcc 39801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 36770806 - 36770864
Alignment:
Q  40 aacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggacc 99  Q
    ||||||||||| ||||||||||| |||||| | || ||||||||||||||||||||||||    
T  36770806 aacagcctcttatgtaaaaaacaaggtaagcc-gcatacaatacactaaatggtgggacc 36770864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 41425982 - 41426033
Alignment:
Q  49 ttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    ||||||||||||||||||||| |||| |||||||||| || |||||||||||    
T  41425982 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaattggtgggaccc 41426033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 209062 - 208977
Alignment:
Q  15 aaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccc 100  Q
    ||||||||||||||||| || ||  |||| ||||||||||| ||||||||||||| |||| | ||||||| | ||||||||||||||    
T  209062 aaaggtcacaagttcaagtcctggcaacaacctcttgtgta-aaaacagggtaaggctgcattcaatacaccaaaatggtgggaccc 208977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 22600488 - 22600569
Alignment:
Q  49 ttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagcttt 130  Q
    |||||||||| |||||||||| ||| ||||||||||| ||||||||||| || ||| | |  | | ||||||||||||||||    
T  22600488 ttgtgtaaaacacagggtaaggctgtgtacaatacaccaaatggtgggatcccttcccggatcctgcgtatgcgggagcttt 22600569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 22907975 - 22907915
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    ||||||||||||||||||||| ||| |||||  ||| |||||||||| ||||||||||||||    
T  22907975 aaacagcctcttgtgtaaaaa-cagagtaaggttgcatacaatacaccaaatggtgggaccc 22907915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 156
Target Start/End: Complemental strand, 29184096 - 29184055
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgcccttattgttt 156  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  29184096 cgtatgcgggagctttagtgcaccgggttgcccttatagttt 29184055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 22025541 - 22025597
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaag 69  Q
    ||||||||||   |||||| || || |||||||||||||||||||||||||||||||    
T  22025541 tgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaag 22025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 37024691 - 37024626
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaa 80  Q
    |||||||||||  |||||| || || ||||||||||||||||  ||||||||||||| ||||||||||    
T  37024691 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaa 37024626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 24323816 - 24323725
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagcttt 130  Q
    ||||| |||||||||||||| ||||||||||  |||||| ||||| | |||| ||||||||| ||| ||| || |   ||||||||||||||    
T  24323816 aaacaacctcttgtgtaaaagacagggtaagcttgcgtataatactccaaatagtgggaccccttcccagaccctgtatatgcgggagcttt 24323725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 24360440 - 24360349
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagcttt 130  Q
    ||||| |||||||||||||| ||||||||||  |||||| ||||| | |||| ||||||||| ||| ||| || |   ||||||||||||||    
T  24360440 aaacaacctcttgtgtaaaagacagggtaagcttgcgtataatactccaaatagtgggaccccttcccagaccctgtatatgcgggagcttt 24360349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 151
Target Start/End: Original strand, 19438768 - 19438802
Alignment:
Q  117 tatgcgggagctttagtgcaccaggttgcccttat 151  Q
    |||||||||||| ||||||||||||||||||||||    
T  19438768 tatgcgggagctctagtgcaccaggttgcccttat 19438802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 31694207 - 31694109
Alignment:
Q  51 gtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||| ||| |||  |||| ||||||||||  | || |||||| | ||| ||| |||| |||||||||||| |||||||||||||  |||||||    
T  31694207 gtgtaaaaaataggctaaagctgcatacaatacacctattgatgggactccttcccagaccttgcgtatgcgggagatttagtgcaccagactgccctt 31694109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 138
Target Start/End: Complemental strand, 9794471 - 9794390
Alignment:
Q  57 aaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||||||||||||||| |||||||||| |||| |||||| || ||| ||| ||   | ||||| | ||||||||||||||    
T  9794471 aaaacagggtaagactgcatacaatacaccaaatagtgggatcccttcacagacccagcatatgcagaagctttagtgcacc 9794390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 24903807 - 24903746
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    ||||||||| |||||||||||| ||||||||| || ||||||| ||| || ||||| |||||    
T  24903807 aaacagccttttgtgtaaaaaatagggtaagattgtgtacaatccaccaattggtgagaccc 24903746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 25622533 - 25622594
Alignment:
Q  88 aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||| ||| | | || | |||||||||||||||||||||||| | ||||||||    
T  25622533 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccggattgccctt 25622594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 149
Target Start/End: Original strand, 32354228 - 32354261
Alignment:
Q  116 gtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||||||||||| ||||||||||    
T  32354228 gtatgcgggagctttagtgcaccgggttgccctt 32354261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 20639770 - 20639659
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||| | | || | |||||||||||||||||||||||    
T  20639770 aaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 20639671  T
Q  138 caggttgccctt 149  Q
    | ||||||||||    
T  20639670 cgggttgccctt 20639659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 6430762 - 6430625
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||  ||| | | ||     
T  6430762 tgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccacttcccggaccc 6430664  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgcccttat 151  Q
    | |||||||||||||||||| ||||| ||||||||||||    
T  6430663 tgcgtatgcgggagctttagcgcaccgggttgcccttat 6430625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 17043531 - 17043398
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||| |||||| || || |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||| ||| ||     
T  17043531 tgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccagaccc 17043432  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccc 147  Q
    | | ||||| ||||||||| ||||||||| |||||    
T  17043431 tgcatatgctggagcttta-tgcaccaggctgccc 17043398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 14983858 - 14983968
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||||||||||||||||||| ||||||||  ||| ||||||||||||||||||||||||| ||| | | || | |||||||||||||||||||| |||    
T  14983858 aaacagcctcttgtgtaaaaaatagggtaaggttgcctacaatacactaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtacc 14983957  T
Q  139 aggttgccctt 149  Q
    | |||||||||    
T  14983958 atgttgccctt 14983968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 25629073 - 25629183
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||| ||||||||||||||| |||||||| ||| ||||||||||| |||||||||||||| ||| | | || ||| ||||||||||||||||||||||    
T  25629073 aaacagtctcttgtgtaaaaaatagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctacatatgcgggagctttagtgcacc 25629172  T
Q  139 aggttgccctt 149  Q
     ||||||||||    
T  25629173 gggttgccctt 25629183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 5648260 - 5648392
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||| | | || | |    
T  5648260 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgc 5648358  T
Q  116 gtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||| |||||||  ||||||||||    
T  5648359 gtatgcgggagcttcagtgcactgggttgccctt 5648392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 16408737 - 16408602
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagccctt 113  Q
    ||||||||  |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||| |||| ||| | | ||      
T  16408737 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggacccc 16408638  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | |||||||||||||||||||||| ||||||||||    
T  16408637 gcatatgcgggagctttagtgcaccgggttgccctt 16408602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 44363269 - 44363131
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac--taaatggtgggaccctttcgcagcc 110  Q
    ||||||||||| ||||||| || || |||||||||| |||||||||||||||||| | ||||||||||  |||   |||||||||||||| ||| | | |    
T  44363269 tgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggctgcgtacaacgcaccaaaaatggtgggaccccttcccggac 44363170  T
Q  111 cttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||||||||||||||| ||||||||||    
T  44363169 cctgcgtatgcgggagctttagtgcaccgggttgccctt 44363131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 47443956 - 47444091
Alignment:
Q  14 gaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccctt 113  Q
    ||||||||||  |||||| || || ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||| ||| | | || |    
T  47443956 gaaaggtcacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccct 47444055  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccctt 149  Q
     | ||||| ||||||| |||||||  ||||||||||    
T  47444056 gcatatgcaggagcttcagtgcactgggttgccctt 47444091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 21646965 - 21647098
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagccctt 113  Q
    ||||||||| |||||| || || |||||||||||||||||||||| |||||||| |||||||||||| || |  ||||||||||||| ||| ||| ||      
T  21646965 aaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaaggctgcgtacaatataccaataatggtgggaccccttcccagacccc 21647064  T
Q  114 acgtatgcgggagctttagtgcaccaggttgccc 147  Q
     | |||||||||||||||||||||| ||||||||    
T  21647065 gcatatgcgggagctttagtgcaccgggttgccc 21647098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 51865152 - 51865050
Alignment:
Q  36 tgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgc 135  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||| ||| ||| | | || | ||||||||||||||||| |||    
T  51865152 tgtaaacagcctcttgtgtaaaaaacatggtaaggctgcgtacaatacaccaaatggtggggccccttcccggaccctgcgtatgcgggagctttattgc 51865053  T
Q  136 acc 138  Q
    |||    
T  51865052 acc 51865050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 47528665 - 47528531
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||| |||||| || || ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | ||     
T  47528665 tgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc 47528568  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |   |||| ||||||| ||||||||| ||||||||||    
T  47528567 tgaatatgtgggagctctagtgcaccgggttgccctt 47528531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 48598960 - 48598826
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | ||     
T  48598960 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggacca 48598863  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | ||||| |||||| ||||||||| ||||||||||    
T  48598862 tgcatatgccggagctctagtgcaccgggttgccctt 48598826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 30639378 - 30639513
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || |||||| ||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||| ||| | | ||     
T  30639378 tgaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaatggtgagaccccttcccggaccc 30639476  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||||||||||||  ||||||||||    
T  30639477 tgcatatgcgggagctttagtgcactgggttgccctt 30639513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 40915830 - 40915965
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttac 115  Q
    ||||||||  |||||| || || ||||||||||||||||||||| || |||||| ||||||||||||||| ||||||||||| || ||| | | || | |    
T  40915830 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-caaggtaaggctgcgtacaatacaccaaatggtgggagcccttcccggaccctgc 40915928  T
Q  116 gtatgcgggagctttagtgcaccaggttgcccttatt 152  Q
    |||||||||||||| |||||||| | |||||||||||    
T  40915929 gtatgcgggagcttcagtgcaccggattgcccttatt 40915965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 23501813 - 23501923
Alignment:
Q  41 acagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||||||||||||||||||||||||||  |||||||||||||| |  ||||||||||||| ||| | | || | | ||||||||||||||||||||||    
T  23501813 acagcctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcacc 23501912  T
Q  139 aggttgccctt 149  Q
     ||||||||||    
T  23501913 gggttgccctt 23501923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 9832448 - 9832314
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | ||     
T  9832448 tgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc 9832351  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | ||||| ||| || ||||||||| ||||||||||    
T  9832350 tgcatatgcaggaactctagtgcaccgggttgccctt 9832314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 11054283 - 11054149
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || |||||| |||||||||||||  ||||||||||||||||||||||||| |||||| || |||| ||| | | ||     
T  11054283 tgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgtaaaa--cagggtaagactgcgtacaatacaccaaatggcggaaccccttcccggaccc 11054186  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  11054185 tgcatatgcgggagctctagtgcaccgggttgccctt 11054149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 19027846 - 19027971
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||| | ||||||||||||||||||||||| ||||||||||||||| || ||||||||||| ||  ||| |      
T  19027846 tgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaattggtgggacccctttccagactc 19027945  T
Q  113 tacgtatgcgggagctttagtgcacc 138  Q
    | |||||| |||||||||||||||||    
T  19027946 tgcgtatgtgggagctttagtgcacc 19027971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 20224982 - 20225116
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||||||   |||||| || || ||||| ||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | ||     
T  20224982 tgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc 20225079  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  20225080 tgcatatgcgggagctctagtgcaccgggttgccctt 20225116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 148
Target Start/End: Complemental strand, 29208033 - 29207900
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || |||  |||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | ||     
T  29208033 tgaaaggtcacgggttcaagtcctggaaattgcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccc 29207936  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccct 148  Q
    | | |||||||||||| ||||||||| |||||||||    
T  29207935 tgcatatgcgggagctctagtgcaccgggttgccct 29207900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 35567168 - 35567304
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||||||   |||||| || || |||||||| |||||||||||||||||||||| ||| |||||| |||| |||||||||||||| ||| |   ||     
T  35567168 tgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaaacagggtaaggctgtgtacaacacaccaaatggtgggaccccttcccgaaccc 35567267  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | ||| |||||||||||||||||||| || |||||||    
T  35567268 tgcgtctgcgggagctttagtgcaccgggctgccctt 35567304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 149
Target Start/End: Complemental strand, 30690272 - 30690177
Alignment:
Q  54 taaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||| |||| |||||||||| || ||||||||||| ||| | | || | ||||||||||||||||||||||||||| |||||||    
T  30690272 taaaaaacagggtaaggctgcatacaatacaccaattggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctgccctt 30690177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 37494849 - 37494972
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc-tttcgcagccc 111  Q
    |||||||||||| |||||| || || ||||| |||||||||||||||||||||||||  ||| ||||||| || |||||||||||||| |||||   |||    
T  37494849 tgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggttgcatacaatataccaaatggtgggacccctttcgggaccc 37494948  T
Q  112 ttacgtatgcgggagctttagtgca 136  Q
    |  ||||||| ||||||||||||||    
T  37494949 tg-cgtatgcaggagctttagtgca 37494972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 5306800 - 5306661
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||  |||||||||  |||||||||||||| |||||||||||||| ||| | | ||     
T  5306800 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaat-cagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccc 5306702  T
Q  113 tacgtatg----cgggagctttagtgcaccaggttgccctt 149  Q
    | ||||||    ||||||||||| |||||| ||||||||||    
T  5306701 tgcgtatgtggacgggagctttaatgcaccgggttgccctt 5306661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 12711553 - 12711450
Alignment:
Q  47 tcttgtgtaaaaaac-agggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgc 145  Q
    ||||||||||||||  |||||||||||||||||||||||| |||||| ||||||| ||| ||| |||  ||||||||| | ||||||||||||  |||||    
T  12711553 tcttgtgtaaaaaaatagggtaagactgcgtacaatacaccaaatggcgggaccccttctcagacctagcgtatgcggaaactttagtgcacccagttgc 12711454  T
Q  146 cctt 149  Q
    ||||    
T  12711453 cctt 12711450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 20405110 - 20405223
Alignment:
Q  39 aaacagcctcttgtgtaaaa-aacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgc 135  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||  ||||||||||||| ||| | | ||   | |||||||||||||||||||    
T  20405110 aaacagcctcttgtgtaaaaaaacagggtaagattgcgtacaatacactaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgc 20405209  T
Q  136 accaggttgccctt 149  Q
    |   ||||||||||    
T  20405210 attgggttgccctt 20405223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 16911586 - 16911698
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgca 136  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||||| |  ||||||||||||| ||| | | || | |||| ||||||||||||||  |    
T  16911586 aaacagcctcttgtgtacaaatcagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtacgcgggagctttagttta 16911685  T
Q  137 ccaggttgccctt 149  Q
    || ||||||||||    
T  16911686 ccgggttgccctt 16911698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 7909391 - 7909280
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgc-gggagctttagtgcac 137  Q
    |||||| |||||||||||||| |||||||||  |||||||||||||| |||||||||||||| ||| |   || | ||||||| |||||||||||||||     
T  7909391 aaacagtctcttgtgtaaaaa-cagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgcggggagctttagtgcat 7909293  T
Q  138 caggttgccctta 150  Q
    | |||||||||||    
T  7909292 cgggttgccctta 7909280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 8473744 - 8473620
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcag--cccttacgtatgcgg 123  Q
    |||||| || || ||||||||||||||||  ||  ||||||||| |||| |||||||||| |||||||||||||| ||| | |  ||| | | |||||||    
T  8473744 gttcaagtcctggaaacagcctcttgtgtttaa--cagggtaaggctgcatacaatacaccaaatggtgggaccccttccccggacccctgcatatgcgg 8473647  T
Q  124 gagctttagtgcaccaggttgccctta 150  Q
    ||||||||||||||| |||||||||||    
T  8473646 gagctttagtgcaccgggttgccctta 8473620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 21489111 - 21489223
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| || | |||||||||||||| ||| |   || | |||||||||||||||| ||||||    
T  21489111 aaacagcctcttgcgtaaaaaacagagtaagactgcgtacaatgcaccaaaatggtgggaccccttcccgaaccctgcgtatgcgggagctttcgtgcac 21489210  T
Q  138 caggttgccctta 150  Q
      |||||| ||||    
T  21489211 tgggttgctctta 21489223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 25463120 - 25463247
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||| ||||||||||||||||| ||| |||  ||||||||| |||| |||||||||||||| ||| | | ||     
T  25463120 tgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaactgggaaaggttgcgtacaacacaccaaatggtgggaccccttcccggaccc 25463219  T
Q  113 tacgtatgcgggagctttagtgcaccagg 141  Q
    | | |||||||||||||| ||||||||||    
T  25463220 tgcatatgcgggagcttt-gtgcaccagg 25463247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 54175088 - 54175199
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtggga-ccctttcgcagcccttacgtatgcgggagctttagtgca 136  Q
    |||||||||||||||||||| |||||||||| |||||||||||||| | ||||||||||| ||||| | | | || | | ||||||||||||||||||||    
T  54175088 aaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaaaatggtgggaccccttccccggaccctgcatatgcgggagctttagtgca 54175186  T
Q  137 ccaggttgccctt 149  Q
    || || |||||||    
T  54175187 ccgggctgccctt 54175199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 138
Target Start/End: Complemental strand, 9987945 - 9987846
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||| ||||||||||||| || |||||||| |||| |||||||||| |||||||||||||| |||   | |||| | ||||||||||||||| ||||||    
T  9987945 aaacaacctcttgtgtaaacaatagggtaaggctgcatacaatacaccaaatggtgggaccccttccttgaccttgcatatgcgggagctttaatgcacc 9987846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 55766558 - 55766467
Alignment:
Q  58 aaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||| |||||||||||||||| |||||||| ||||  || | | |||| |||||||| ||||||||||||||| || |||||||    
T  55766558 aaacagggtaaggctgcgtacaatacactgaatggtggaaccccatcccggaccttgcgtatgcgagagctttagtgcaccgggatgccctt 55766467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 55830813 - 55830722
Alignment:
Q  58 aaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||  |||||||||||||||| |||||||| ||||  || | | |||| |||||||| |||||||||||||||||| |||||||    
T  55830813 aaacagggtaatgctgcgtacaatacactgaatggtggaaccccatcccggaccttgcgtatgcgagagctttagtgcaccaggatgccctt 55830722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 13256508 - 13256400
Alignment:
Q  43 agcctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccag 140  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |  ||| ||||||||| ||| |   ||   | | |||||||||||||||||||| |    
T  13256508 agcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatagtgggaccccttcccgaaccccgcatctgcgggagctttagtgcaccgg 13256409  T
Q  141 gttgccctt 149  Q
    |||||||||    
T  13256408 gttgccctt 13256400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 17079754 - 17079697
Alignment:
Q  47 tcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttc 104  Q
    ||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  17079754 tcttgtgtataaaacagggtaaggctgcatacaatacgctaaatggtgggaccctttc 17079697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 39029172 - 39029111
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac-taaatggtgggacc 99  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||    
T  39029172 aaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacacgaaaatggtgggacc 39029111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 7038051 - 7038122
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 85  Q
    |||||||||||| |||||| || || ||||||| |||||||||||||| ||||||||||| ||||||||||||    
T  7038051 tgaaaggtcacaggttcaagtcctg-aaacagcttcttgtgtaaaaaatagggtaagacttcgtacaatacac 7038122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 41018930 - 41018807
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||| ||||||||||||||   |||||||| || |||||||||||| |||| ||||||||| ||| ||| |||    
T  41018930 tgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatt-agggtaaggctacgtacaatacaccaaatagtgggaccccttcccagacct 41018832  T
Q  113 tacgtatgcgggagctttagtgcac 137  Q
    | ||||||  || ||||||||||||    
T  41018831 tgcgtatggaggggctttagtgcac 41018807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 7385613 - 7385522
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttc 104  Q
    |||||||||||  ||||||  | || |||||||||| ||||||||||| ||||||||  || || |||||||| ||||||||||||||||||    
T  7385613 tgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggtaaggttgtgtgcaatacaccaaatggtgggaccctttc 7385522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 49796822 - 49796911
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctt 129  Q
    |||||||||||||||| |||| || |||||| ||||||||||||||| |||||||||||||| ||| |   || | |||||||||||||||    
T  49796822 aaacagcctcttgtgttaaaa-catggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgcgggagctt 49796911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 147
Target Start/End: Original strand, 54967019 - 54967151
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||| |||||| |  || ||| | |||||||||||||||||||||||||  ||| ||||||| || |||||||||||||| ||| |   ||     
T  54967019 tgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaaacagggtaaggttgc-tacaatataccaaatggtgggaccccttcccgtaccc 54967117  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccc 147  Q
    ||| |||||||||||||| ||||||| || |||||    
T  54967118 tacatatgcgggagcttt-gtgcaccgggctgccc 54967151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 487272 - 487187
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacact-aaatggtggga 97  Q
    |||||||||||  |||||| || || ||||| ||||||||||| |||||| |||||  |||||||||||||||| |||||||||||    
T  487272 tgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaacaaggtaaagctgcgtacaatacactaaaatggtggga 487187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 149
Target Start/End: Original strand, 20225119 - 20225210
Alignment:
Q  60 acagggtaagactgcgtacaatacactaa--atggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||| ||||||||||||||| ||  |||||||||||| ||| | | ||   | |||||||||||||||||||||| ||||||||||    
T  20225119 acagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctt 20225210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 149
Target Start/End: Complemental strand, 20908733 - 20908637
Alignment:
Q  54 taaaaaacagggtaagactgcgtacaatacactaaa-tggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||| | |||||| ||||||||||||||| ||| ||||||||||| ||| |   || | ||||||||||||||||||||||| ||| |||||||    
T  20908733 taaaaaagaaggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcacaaggctgccctt 20908637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 25343189 - 25343257
Alignment:
Q  17 aggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 85  Q
    |||||||| |||||| |  || ||| || |||||||||||||||||||||||| |||||||||||||||    
T  25343189 aggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 25343257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 48327869 - 48327814
Alignment:
Q  46 ctcttgtgtaaaaaacagggtaagactgcgtacaatacacta--aatggtgggacc 99  Q
    ||||||||||||||||||||||||||||| |||||||||| |  ||||||||||||    
T  48327869 ctcttgtgtaaaaaacagggtaagactgcatacaatacaccaataatggtgggacc 48327814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 39077931 - 39077800
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggac-cctttcgcagccc 111  Q
    |||||||||||  |||||| || || ||||||||||||||||  |||||||||||||  ||||||||||| || |||||||| |||  ||||| | | ||    
T  39077931 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggttgcgtacaatataccaaatggtgagacatctttc-cggacc 39077835  T
Q  112 ttacgtatgcgggagctttagtgcaccaggttgcc 146  Q
     | | |||||||||||| ||||||||| |||||||    
T  39077834 ctgcatatgcgggagctctagtgcaccgggttgcc 39077800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 47441667 - 47441580
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccc 100  Q
    |||||||||||| |||||| ||    |||||| ||||| |||||||| ||||||||| ||| ||||||||||| ||||||| ||||||    
T  47441667 tgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaaatcagggtaaggctgtgtacaatacaccaaatggttggaccc 47441580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 49938727 - 49938611
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccctttcgcagccc 111  Q
    |||||||||||| |||||| || || ||||||||||||||||| ||||| |||||||   | |||||||||| | |||||||||||||| ||| ||  ||    
T  49938727 tgaaaggtcacaggttcaagtcctggaaacagcctcttgtgta-aaaacggggtaag---gtgtacaatacaccaaaatggtgggaccccttcccatacc 49938632  T
Q  112 ttacgtatgcgggagctttag 132  Q
     | | ||||||||||||||||    
T  49938631 ctgcatatgcgggagctttag 49938611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 14590861 - 14590922
Alignment:
Q  39 aaacagcctcttgtgtaaaa-aacagggtaagactgcgtacaatacactaaatggtgggacc 99  Q
    |||||||||||||| ||||| ||||||||||| |||| |||||||||  |||||||||||||    
T  14590861 aaacagcctcttgtctaaaaaaacagggtaaggctgcatacaatacatcaaatggtgggacc 14590922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 30352661 - 30352581
Alignment:
Q  71 ctgcgtacaatacactaaa--tggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||||| |||  ||||||||||| ||| | | || | ||||||||||||||||||||||||  |||||||||    
T  30352661 ctgcgtacaatacaccaaaaatggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccgtgttgccctt 30352581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 38755970 - 38755909
Alignment:
Q  88 aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||| ||| | | || | |||||||||||||||||||||||| ||||||||||    
T  38755970 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctt 38755909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 30581591 - 30581515
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaa-aaaacagggtaagactgcgtacaataca-ctaaatggtgggaccc 100  Q
    |||||| ||||| ||||| |||||||||||| |||||||||||||  || |||||||||| | ||||||||||||||    
T  30581591 gttcaagtcgtggaaacaacctcttgtgtaaaaaaacagggtaagggtgtgtacaatacaccaaaatggtgggaccc 30581515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 35532092 - 35532135
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgcccttattgttttt 158  Q
    |||||||||||||||||||||||| |||||||||| || |||||    
T  35532092 cgtatgcgggagctttagtgcaccgggttgcccttttttttttt 35532135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 149
Target Start/End: Original strand, 2813169 - 2813262
Alignment:
Q  59 aacagggtaagactgcgtacaatacacta--aatggtgggaccctttcgcagcccttacgtatgcgggagcttt-agtgcaccaggttgccctt 149  Q
    ||||||||||||||||||||||||||  |  ||||||||||||||||| |   |  | |||||||||||||||| |||||||| | ||||||||    
T  2813169 aacagggtaagactgcgtacaatacatcaataatggtgggaccctttcccgaacgatgcgtatgcgggagctttaagtgcaccggattgccctt 2813262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 149
Target Start/End: Original strand, 11394952 - 11394986
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||||| ||||||||||    
T  11394952 cgtatgcgggagctttagtgcaccgggttgccctt 11394986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 149
Target Start/End: Original strand, 11404679 - 11404713
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||||| ||||||||||    
T  11404679 cgtatgcgggagctttagtgcaccgggttgccctt 11404713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 23580315 - 23580281
Alignment:
Q  43 agcctcttgtgtaaaaaacagggtaagactgcgta 77  Q
    ||||||||||||||||||||||| |||||||||||    
T  23580315 agcctcttgtgtaaaaaacaggggaagactgcgta 23580281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 30496457 - 30496374
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggac 98  Q
    |||||||||||  |||||| || || ||||||||||||||||||| |   ||||||| |||| |||||||||| |||||| |||||    
T  30496457 tgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaaaca--cgggtaaggctgcatacaatacaccaaatggggggac 30496374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 38786673 - 38786743
Alignment:
Q  79 aatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||| |||||||||||||| ||| | | || | | |||||||||||| ||||||||| ||||||||||    
T  38786673 aatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctt 38786743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 149
Target Start/End: Complemental strand, 40553972 - 40553938
Alignment:
Q  115 cgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||||| ||||||||||    
T  40553972 cgtatgcgggagctttagtgcaccgggttgccctt 40553938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 51420598 - 51420644
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 85  Q
    ||||| ||||||||||| ||||||||||||| ||| |||||||||||    
T  51420598 aaacaacctcttgtgtagaaaacagggtaaggctgggtacaatacac 51420644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 33836549 - 33836488
Alignment:
Q  88 aatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||||||||| ||| | | || | |||||||||||||||||||||| | ||||||||||    
T  33836549 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggttgccctt 33836488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 10277879 - 10277758
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcggga 125  Q
    ||||||||| |  |||||||||||||| ||||| |  || |||| ||||||||||||||| ||||||||  |||| ||| ||| || | | |||||||||    
T  10277879 gttcaaatccttgaaacagcctcttgtataaaata--ggataaggctgcgtacaatacaccaaatggtgaaaccccttcccagaccctgcatatgcggga 10277782  T
Q  126 gctttagtgcaccaggttgccctt 149  Q
    | | ||||| ||| | ||||||||    
T  10277781 gttctagtgaaccggattgccctt 10277758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 134
Target Start/End: Original strand, 16494259 - 16494338
Alignment:
Q  57 aaaacagggtaagactgcgtacaatacactaaa--tggtgggaccctttcgcagcccttacgtatgcgggagctttagtg 134  Q
    ||||||||||||  |||| |||||||||| |||  ||||||||||||||| ||| || |  |||||||| ||||||||||    
T  16494259 aaaacagggtaaagctgcatacaatacaccaaaaatggtgggaccctttcccagaccctgtgtatgcggaagctttagtg 16494338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 32478918 - 32478793
Alignment:
Q  17 aggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacg 116  Q
    |||||||| |||||| || || ||||| ||||| ||||||||| ||||||||| |||     ||||||| |||||||||||||| ||| | | ||   ||    
T  32478918 aggtcacaggttcaagtcctggaaacaacctctagtgtaaaaa-cagggtaaggctg-----aatacaccaaatggtgggaccccttcccggacccagcg 32478825  T
Q  117 tatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||| ||||||| ||| ||||||    
T  32478824 tatgcgggagcttt-gtgcaccgggtggccctt 32478793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 32484335 - 32484367
Alignment:
Q  117 tatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||| ||||||||||    
T  32484335 tatgcgggagctttagtgcaccgggttgccctt 32484367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 35894563 - 35894511
Alignment:
Q  49 ttgtgtaaaaaacagggtaagactgcgtacaataca-ctaaatggtgggaccc 100  Q
    |||||||||||||| ||||||  ||||||||||||| | ||||||||||||||    
T  35894563 ttgtgtaaaaaacacggtaagtgtgcgtacaatacaccaaaatggtgggaccc 35894511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 44718641 - 44718701
Alignment:
Q  89 atggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||| ||| ||| || | ||||||||||||||||||  |||| ||||||||||    
T  44718641 atggtgggaccccttcccagaccctgcgtatgcgggagctttagcacaccgggttgccctt 44718701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 56323002 - 56323034
Alignment:
Q  117 tatgcgggagctttagtgcaccaggttgccctt 149  Q
    |||||||||||||||||||||| ||||||||||    
T  56323002 tatgcgggagctttagtgcaccgggttgccctt 56323034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 158
Target Start/End: Complemental strand, 24882 - 24764
Alignment:
Q  40 aacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacca 139  Q
    |||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||| ||| |   || | |||||||||||||||||||||| |     
T  24882 aacagcctcttgtgtaaaaaacagggtaaggctgcgtacaacacaccaaatggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcagcc 24783  T
Q  140 ggttgcccttattgttttt 158  Q
    |||||||||| || |||||    
T  24782 ggttgcccttttttttttt 24764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 46855 - 46965
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    ||||| |||||||||||||||| ||||||||  |||||||||||||| |||||||||||||| ||| | | || | ||||||||||||||||||||||||    
T  46855 aaacaacctcttgtgtaaaaaatagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcacc 46954  T
Q  139 aggttgccctt 149  Q
     ||||||||||    
T  46955 gggttgccctt 46965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 137
Target Start/End: Original strand, 43683 - 43780
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtggga-ccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||||| ||||||||||||  || |||||| ||||||||||||||| ||||||||||| ||||||| | | || | | |||||||||||| ||||||||    
T  43683 aaacagcgtcttgtgtaaaa--caaggtaaggctgcgtacaatacaccaaatggtgggacccctttctcggaccctgcatatgcgggagctctagtgcac 43780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 46770 - 46710
Alignment:
Q  87 aaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccc 147  Q
    |||||||||||||| ||| ||| || | ||||||||||||||||| |||| |||| |||||    
T  46770 aaatggtgggaccccttcccagaccctgcgtatgcgggagctttaatgcatcaggctgccc 46710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 13160 - 13025
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||| ||||||| || |||||| |||||||||||||||  ||||||||||||| ||| ||| ||     
T  13160 tgaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaaaaa-caaggtaaggctgcgtacaatacaccgaatggtgggaccccttcccagaccc 13062  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | |||||||||| ||||||||||||| ||||||||||    
T  13061 tgcgtatgcgggggctttagtgcaccgggttgccctt 13025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 30577 - 30711
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||  ||||||| | ||||||||||||||| |||||||||||||| ||| | | ||     
T  30577 tgaaaggtcaccggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtagggctgcgtacaatacaccaaatggtgggaccccttcccggaccc 30674  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||| ||||||||||    
T  30675 tgcatatgcgggagctctagtgcaccgggttgccctt 30711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 48756 - 48635
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcggga 125  Q
    |||||| | ||| ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||| ||| | | || | | |||||||||    
T  48756 gttcaagtggtggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcggga 48659  T
Q  126 gctttagtgcaccaggttgccctt 149  Q
    ||| ||||||||| ||||||||||    
T  48658 gctctagtgcaccgggttgccctt 48635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 137
Target Start/End: Original strand, 10834 - 10932
Alignment:
Q  39 aaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcac 137  Q
    ||||| ||||||||||||||||||||||| | |||||| |||||||| |||||||||||||| ||| | | || | |||||||||||||||||||||||    
T  10834 aaacaacctcttgtgtaaaaaacagggtagggctgcgtccaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 10932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 149
Target Start/End: Complemental strand, 72971 - 72868
Alignment:
Q  46 ctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgc 145  Q
    ||||||||||||||||| |||||| |||| |||||||||| ||||||| | |||| ||| | |  | | |||||||||||||||||||||||||||||||    
T  72971 ctcttgtgtaaaaaacacggtaaggctgcctacaatacaccaaatggtagtaccccttcccggaacctgcgtatgcgggagctttagtgcaccaggttgc 72872  T
Q  146 cctt 149  Q
    ||||    
T  72871 cctt 72868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 11129 - 11263
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || |||||||||||||||||||| | ||  |||| |||| |||||||||| |||||||||||| | ||| | | ||     
T  11129 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacaaag--taaggctgcttacaatacaccaaatggtgggacaccttcccggaccc 11226  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    | | |||||||||||| ||||||||||||||||||||    
T  11227 tgcatatgcgggagctctagtgcaccaggttgccctt 11263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 148
Target Start/End: Complemental strand, 10185 - 10052
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||  ||| ||||||||||||||||||||| |||| ||||||||| ||| | | ||     
T  10185 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa--cagagtaagactgcgtacaatacaccaaatagtgggaccccttcccggaccc 10088  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccct 148  Q
    | | ||||| ||||||  |||||||| |||||||||    
T  10087 tgcatatgcaggagctccagtgcaccgggttgccct 10052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 148
Target Start/End: Complemental strand, 20513 - 20380
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    |||||||||||  |||||| || || ||||||||||||||||||||  ||| ||||||||||||||||||||| |||| ||||||||| ||| | | ||     
T  20513 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa--cagagtaagactgcgtacaatacaccaaatagtgggaccccttcccggaccc 20416  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgccct 148  Q
    | | ||||| ||||||  |||||||| |||||||||    
T  20415 tgcatatgcaggagctccagtgcaccgggttgccct 20380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 1722 - 1591
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagccct 112  Q
    ||||||||||   |||||| || || ||||| ||||||||||||||  |||| |||| |||| |||||||||| ||||| |||||||| ||| | | ||     
T  1722 tgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgtaaaa--caggataaggctgcatacaatacaccaaatgatgggaccccttcccggaccc 1625  T
Q  113 tacgtatgcgggagctttagtgcaccaggttgcc 146  Q
      ||||||||||||||||||||||||||||||||    
T  1624 ggcgtatgcgggagctttagtgcaccaggttgcc 1591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 35152 - 35063
Alignment:
Q  16 aaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaa-aaaacagggtaagactgcgtacaatacactaaatggtgggaccctttc 104  Q
    ||||||||  |||||| || || |||||| |||||||||   ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  35152 aaggtcacgggttcaagtcctgaaaacagtctcttgtgtgtgaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccctttc 35063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 23610 - 23714
Alignment:
Q  26 gttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcggga 125  Q
    |||||| || || ||||| |||||||||||||||||||||| || |||||||||||  |  |||||||||||||| ||| ||| ||||  ||||| ||||    
T  23610 gttcaagtcttgcaaacaacctcttgtgtaaaaaacagggtgaggctgcgtacaatgtagcaaatggtgggaccccttcccagaccttgagtatgtggga 23709  T
Q  126 gcttt 130  Q
    |||||    
T  23710 gcttt 23714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 24220 - 24134
Alignment:
Q  63 gggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgccctt 149  Q
    ||||||| ||||||||||||||| |||||||||||||| ||| | | || | | |||||||||||| ||||||||| | ||||||||    
T  24220 gggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccggattgccctt 24134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 32960 - 33021
Alignment:
Q  45 cctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaa-tggtgggaccctttcg 105  Q
    |||||| |||||||||||| |||||||||  |||||||||| ||| ||||||||||||||||    
T  32960 cctcttctgtaaaaaacagagtaagactgtatacaatacaccaaattggtgggaccctttcg 33021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 226517 - 226456
Alignment:
Q  39 aaacagcctcttgtgtaaaaaa-cagggtaagactgcgtacaatacactaaatggtgggacc 99  Q
    |||||||||||||| ||||||| ||||||||| |||| |||||||||  |||||||||||||    
T  226517 aaacagcctcttgtctaaaaaaacagggtaaggctgcatacaatacatcaaatggtgggacc 226456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 4155 - 4227
Alignment:
Q  13 tgaaaggtcacaagttcaaatcgtgtaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 85  Q
    |||||||||||  |||||| || || ||||| |||||||||||||| ||||| ||||  ||||||||||||||    
T  4155 tgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacac 4227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 138
Target Start/End: Original strand, 3572 - 3667
Alignment:
Q  43 agcctcttgtgtaaaaaacagggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcacc 138  Q
    |||||||||||||||| | | |||||| ||||||| |||||||  |||| |||||||| ||| |   || | ||||||||| ||||||||||||||    
T  3572 agcctcttgtgtaaaatataaggtaaggctgcgtataatacaccgaatgatgggaccccttcccgaaccctgcgtatgcggcagctttagtgcacc 3667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 159
Target Start/End: Original strand, 24696 - 24792
Alignment:
Q  63 gggtaagactgcgtacaatacactaaatggtgggaccctttcgcagcccttacgtatgcgggagctttagtgcaccaggttgcccttattgttttta 159  Q
    ||||||||||||||| ||||||| |||| ||||  ||| ||  ||| || | ||||| ||||||||| |||||||| | |||||||| || ||||||    
T  24696 gggtaagactgcgtataatacaccaaatagtggaccccctttccagaccctgcgtatacgggagcttcagtgcacctgattgcccttttttttttta 24792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 3472 times since January 2019
Visitors: 6174