View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0836_high_28 (Length: 492)
Name: NF0836_high_28
Description: NF0836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0836_high_28 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 332; Significance: 0; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 121 - 476
Target Start/End: Complemental strand, 30436690 - 30436335
Alignment:
| Q |
121 |
aatggaaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaaca |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
30436690 |
aatggaaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatttgggttaaca |
30436591 |
T |
|
| Q |
221 |
caagatagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgg |
320 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
30436590 |
caagatagatgggatcatttgaaatctgttttgtcgtgtggatcaaaaggtagttccattttagtgtccactcgtgatgaggatgttgcaacaatcatgg |
30436491 |
T |
|
| Q |
321 |
gaacatgggaaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttacaaagagcatacaaagtt |
420 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
30436490 |
gaacatgggaaactcaccgtttgtctggtctctctgatagtgactgttggttgttgttcaaacaacatgcatttagacgttacaaagagcatacaaagtt |
30436391 |
T |
|
| Q |
421 |
tgtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
476 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30436390 |
tgtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
30436335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 123 - 476
Target Start/End: Original strand, 30712659 - 30713012
Alignment:
| Q |
123 |
tggaaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacaca |
222 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30712659 |
tggaaagaaagctgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacaca |
30712758 |
T |
|
| Q |
223 |
agatagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatggga |
322 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||| | ||||||||||||||||| |
|
|
| T |
30712759 |
agatagatgggatcgtttaaaatctgttttgtcgtgtggatcaaaaggtagttccattttattgtccacccgtgatgaggttgttgcaactatcatggga |
30712858 |
T |
|
| Q |
323 |
acatgggaaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttacaaagagcatacaaagtttg |
422 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
30712859 |
acatgggaaactcaccgtttgtctggtctctctgatagtgactgttggttgttgttcaaacaacatgcatttagacgttacaaagagcatacaaagtttg |
30712958 |
T |
|
| Q |
423 |
tggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
476 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
30712959 |
tggaaataggaaaggagatagcaaagaaatgtaatggattgccacttgcagcaa |
30713012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 121 - 476
Target Start/End: Original strand, 30337754 - 30338112
Alignment:
| Q |
121 |
aatggaaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaaca |
220 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30337754 |
aatggaaggaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaaca |
30337853 |
T |
|
| Q |
221 |
caagatagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgg |
320 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | ||||||| |
|
|
| T |
30337854 |
caagatagatggaatcgtttgaaatctgttttgtcgtgtggatcaaaaggtagttccattttagtgtccactcgtgatgaggatgttgcatcaatcatgg |
30337953 |
T |
|
| Q |
321 |
gaacatgggaaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttaca---aagagcatacaaa |
417 |
Q |
| |
|
| |||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||| ||| ||||| ||||||| |
|
|
| T |
30337954 |
ggacatgggaaagtcaccgtttgtctggtctctctgatagtgattgttggttgttgttcaaacaacatgcatttaaacgtaacaaagaagaggatacaaa |
30338053 |
T |
|
| Q |
418 |
gtttgtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
476 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30338054 |
gcttgtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
30338112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 121 - 476
Target Start/End: Original strand, 30676517 - 30676875
Alignment:
| Q |
121 |
aatggaaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaaca |
220 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30676517 |
aatggaaggaaaggtgcaaggattgttgcaagggaaaagatatttgctggttttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaaca |
30676616 |
T |
|
| Q |
221 |
caagatagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgg |
320 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||| |
|
|
| T |
30676617 |
caagatagatggaatcgtttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatgttgcatcaatcatgg |
30676716 |
T |
|
| Q |
321 |
gaacatgggaaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttaca---aagagcatacaaa |
417 |
Q |
| |
|
| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||| ||||| ||||||| |
|
|
| T |
30676717 |
ggacatgggaaagtcaccgtttgtctagtctctctgatagtgattgttggttgttgttcaaacaacatgcatttaaacgtaacaaagaagaggatacaaa |
30676816 |
T |
|
| Q |
418 |
gtttgtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
476 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30676817 |
gcttgtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
30676875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 123 - 476
Target Start/End: Complemental strand, 30484276 - 30483920
Alignment:
| Q |
123 |
tggaaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacaca |
222 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30484276 |
tggaaagaaaggtgcaaggattgttgcaacggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacaca |
30484177 |
T |
|
| Q |
223 |
agatagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatggga |
322 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
30484176 |
agatagatggaatcgtttgaaatctgttttgtcgtgtggatcaaaaggtagttccattttagtgtccactcgtgatgaggatgttgcaacaatcatgggg |
30484077 |
T |
|
| Q |
323 |
acatgggaaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttaca---aagagcatacaaagt |
419 |
Q |
| |
|
|||||||||| ||||||||| ||| ||||||| |||||||| |||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| |
|
|
| T |
30484076 |
acatgggaaagtcaccgtttatctggtctctcagatagtgattgttggttgttgttcaaacaacatgcatttagacgtaacaaagaagagcatacaaagc |
30483977 |
T |
|
| Q |
420 |
ttgtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
476 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30483976 |
ttgtggagattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
30483920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 126 - 476
Target Start/End: Complemental strand, 30400946 - 30400593
Alignment:
| Q |
126 |
aaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacacaaga |
225 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30400946 |
aaagaaaggtgcaagaattgttgcaagggagaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacacaaga |
30400847 |
T |
|
| Q |
226 |
tagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgggaaca |
325 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | | | ||||||| |||||||||||| |
|
|
| T |
30400846 |
tagatggaatcgtttgaaatctgttttgtcgtgtggatcaaaaggtagttccattttagtgtccacccgtgataaagttgttgcaacaatcatgggaaca |
30400747 |
T |
|
| Q |
326 |
tgggaaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttaca---aagagcatacaaagtttg |
422 |
Q |
| |
|
|| || ||||| ||||||| |||||||||||||||| |||||||||||||||||| || ||||||| ||| ||| | |||||| | || | ||| |
|
|
| T |
30400746 |
tgccaagctcactctttgtctggtctctctgatagtgaatgttggttgttgttcaaagaatatgcattgggacattatagagaagagcgtgcagaacttg |
30400647 |
T |
|
| Q |
423 |
tggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
476 |
Q |
| |
|
| | ||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30400646 |
tagcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
30400593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 123 - 476
Target Start/End: Complemental strand, 29854186 - 29853830
Alignment:
| Q |
123 |
tggaaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacaca |
222 |
Q |
| |
|
||||||||| |||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
29854186 |
tggaaagaagggtgcaagaattgttgcaaggtaaaatatatttgctggttttggatgatgtgtggaatcaaaatcaacaattggaatatgggttaacaca |
29854087 |
T |
|
| Q |
223 |
agatagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatggga |
322 |
Q |
| |
|
||||| |||| |||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| | | ||||||| ||||||||| |
|
|
| T |
29854086 |
agataaatggaatcatttgaagtctgtgttgtcgtgtggatcaaaaggtagttccattttagtgtccactcgtgataaatttgttgcaacaatcatggga |
29853987 |
T |
|
| Q |
323 |
acatgggaaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttaca---aagagcatacaaagt |
419 |
Q |
| |
|
||||| || ||||| ||||| | |||||||||||||||| |||||||||||||||||| || |||||||| || || || |||||||||||||| |
|
|
| T |
29853986 |
acatgccaagctcactctttgtatggtctctctgatagtgaatgttggttgttgttcaaagaatatgcatttggatatttcagagaagagcatacaaagc |
29853887 |
T |
|
| Q |
420 |
ttgtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
476 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
29853886 |
ttgtggaaataggaaaggagattgtaaagaaatgtaatggattgcctcttgcagcaa |
29853830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 121 - 476
Target Start/End: Complemental strand, 29873051 - 29872693
Alignment:
| Q |
121 |
aatggaaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaaca |
220 |
Q |
| |
|
|||||||||||||||||||| | || ||||||| |||| ||||||||| ||||||||||| ||||||| ||| |||||||||||||||| ||||| |
|
|
| T |
29873051 |
aatggaaagaaaggtgcaagaagtgctgcaaggtaaaaaatatttgctcgttttggatgatctgtggaacaaaacccaacaattggaatctggactaaca |
29872952 |
T |
|
| Q |
221 |
caagatagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgg |
320 |
Q |
| |
|
|| |||| ||| |||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||||| | | | ||||||| ||| ||| |
|
|
| T |
29872951 |
catgataagtggaatcatttgaagtctgtgttgtcgtgtggatcaaaaggtagttccattttagtgtccacccgtgataaagttgttgcaacaatcgtgg |
29872852 |
T |
|
| Q |
321 |
gaacatgggaaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttaca---aagagcatacaaa |
417 |
Q |
| |
|
||||||| || ||||| ||||||| || ||||||||||||| |||||||||||||||||| || |||||||| || ||||| ||||||||||||| |
|
|
| T |
29872851 |
gaacatgccaagctcactctttgtctggtatctctgatagtgaatgttggttgttgttcaaagaatatgcatttggatattacagagaagagcatacaaa |
29872752 |
T |
|
| Q |
418 |
gtttgtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
476 |
Q |
| |
|
| || ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
29872751 |
gcttatggaaataggaaaggagattgtaaagaaatgtaatggattgcctcttgcagcaa |
29872693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 130 - 474
Target Start/End: Original strand, 30241619 - 30241966
Alignment:
| Q |
130 |
aaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacacaagataga |
229 |
Q |
| |
|
||||||||| | |||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| | | |
|
|
| T |
30241619 |
aaaggtgcaggaattgttacaaggtaaaatatatttgctagttttggatgatgtgtggaatcaaaatgaacaattggaatcagggttaacacgagagaaa |
30241718 |
T |
|
| Q |
230 |
tgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgggaacatggg |
329 |
Q |
| |
|
||| | ||||||||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||||| | ||||||| |||| |||| ||| |
|
|
| T |
30241719 |
tggaacacattgaaatctgtgttgtcatgtggatccaaaggtagttccattttagtatccactcgtgatgaggttgttgcaacaatcacaaaaacaaggg |
30241818 |
T |
|
| Q |
330 |
aaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttaca---aagagcatacaaagtttgtgga |
426 |
Q |
| |
|
||||||||||||| ||| ||||||| || ||| ||||||||||||||||||||| |||||||| ||| ||| | ||||| ||||||| ||||| | |
|
|
| T |
30241819 |
aaactcaccgtttatctggtctctccgaggatgaatgttggttgttgttcaaacaatatgcatttggacattatagagaagagagtacaaagcttgtgaa |
30241918 |
T |
|
| Q |
427 |
aattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagc |
474 |
Q |
| |
|
||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30241919 |
aataggaaaggagattgtaaagaaatgtaatggattgcctcttgcagc |
30241966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 121 - 476
Target Start/End: Complemental strand, 30750523 - 30750162
Alignment:
| Q |
121 |
aatggaaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaaca |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
30750523 |
aatggaaagaaaggtgcaaggattgttgcaagggaaaagatatttgttggttttggatgatgtatggaatcaaaatgaacaattggaatcagggttaaca |
30750424 |
T |
|
| Q |
221 |
caagatagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgg |
320 |
Q |
| |
|
| ||| | |||| | | |||||| |||| ||||| |||||||| |||||||||||||||||| ||||||| |||||||| | | ||||||| |||| | |
|
|
| T |
30750423 |
cgagagaaatggaacaaattgaaacctgtgttgtcttgtggatccaaaggtagttccattttattgtccacccgtgatgaagttgttgcaacaatcacag |
30750324 |
T |
|
| Q |
321 |
gaacatgggaaac---tcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttaca---aagagcatac |
414 |
Q |
| |
|
||||||| |||| ||| ||||||||| ||||||||||||||| |||||| |||||||| ||||| |||||||| ||| ||||| |||||| | | |
|
|
| T |
30750323 |
gaacatgccaaactcatcatcgtttgtcttctctctctgatagtgaatgttggctgttgttcgaacaatatgcatttggacattacaaagaagagcgtgc |
30750224 |
T |
|
| Q |
415 |
aaagtttgtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
476 |
Q |
| |
|
| | |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30750223 |
tgatctcgtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
30750162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 121 - 476
Target Start/End: Complemental strand, 30061249 - 30060888
Alignment:
| Q |
121 |
aatggaaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaaca |
220 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
30061249 |
aatggaaagagaggtgcaaggattgttgcaagggaaaagatatttgctggttttggatgatgtgtggaatcaaaatcaacaattggaatcagggttaaca |
30061150 |
T |
|
| Q |
221 |
caagatagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgg |
320 |
Q |
| |
|
| ||| | |||| | | |||||| |||| ||||| |||||||| |||||||||||||||||||||||||| |||||||| | | ||||||| |||| | |
|
|
| T |
30061149 |
cgagagaaatggaacaaattgaaacctgtgttgtcttgtggatccaaaggtagttccattttagtgtccacccgtgatgaagttgttgcaacgatcacag |
30061050 |
T |
|
| Q |
321 |
gaacatgggaaac---tcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttaca---aagagcatac |
414 |
Q |
| |
|
|||||| |||| ||| ||||||||| ||||||||||||||| ||||||||||||||| ||||| |||||||| ||| | ||| |||||| | | |
|
|
| T |
30061049 |
gaacataccaaactcatcatcgtttgtcttctctctctgatagtgaatgttggttgttgttcgaacaatatgcatttggacatcacaaagaagagcgtgc |
30060950 |
T |
|
| Q |
415 |
aaagtttgtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
476 |
Q |
| |
|
| | |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
30060949 |
tgatctcgtggcaataggaaaggagatagtaaagaaatgcaatggattgcctcttgcagcaa |
30060888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 126 - 475
Target Start/End: Complemental strand, 30207394 - 30207042
Alignment:
| Q |
126 |
aaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacacaaga |
225 |
Q |
| |
|
||||||||||||| | |||| ||||||| ||||||||||||||||||||||||||||||||||| ||||| | |||||||||| || |||| ||||| |
|
|
| T |
30207394 |
aaagaaaggtgcaggaattgctgcaaggtaaaatatatttgctgattttggatgatgtgtggaacaaaaatcagcaattggaattcggattaagccaaga |
30207295 |
T |
|
| Q |
226 |
tagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgggaaca |
325 |
Q |
| |
|
| |||| || ||||||| || || ||||||||||| ||||||||||||||||||||||||||||||||||||| | |||| || |||||||||||| |
|
|
| T |
30207294 |
gaaatggaatatactgaaatcagtgttatcgtgtggatccaaaggtagttccattttagtgtccactcgtgatgaggttgttgcgacgatcatgggaaca |
30207195 |
T |
|
| Q |
326 |
tgggaaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttaca---aagagcatacaaagtttg |
422 |
Q |
| |
|
|| | |||| | ||| | | ||||||||||| ||| ||||||||||||||||||||| |||||||| ||| | | |||||| | || || ||| |
|
|
| T |
30207194 |
tgccacgctcatcctttatatgttctctctgataatgaatgttggttgttgttcaaacaatatgcatttggacaaaatagagaagagcgtgcagagcttg |
30207095 |
T |
|
| Q |
423 |
tggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagca |
475 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30207094 |
tggaaataggaaaggagatagtaaagaaatgtgatggattgcctcttgcagca |
30207042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 127 - 394
Target Start/End: Original strand, 17417828 - 17418095
Alignment:
| Q |
127 |
aagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatg-aacaattggaatctgggttaacacaaga |
225 |
Q |
| |
|
|||||||||| ||| | | ||| |||| |||| |||||| ||| ||||||| ||||||||||| ||||||| ||||||| | || || |||| ||||| |
|
|
| T |
17417828 |
aagaaaggtgaaagaactattgaaaggtaaaagatattttctggttttggacgatgtgtggaa-caaaatgcaacaattagcattcggattaagccaaga |
17417926 |
T |
|
| Q |
226 |
tagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgggaaca |
325 |
Q |
| |
|
| |||| || |||||||| || || ||||||||| ||||||||||||||||||||||||||||||||||||| | |||| | |||||||||||| |
|
|
| T |
17417927 |
gaaatggaatacgttgaaatcagtgtttatgtgtggatccaaaggtagttccattttagtgtccactcgtgatgaggttgttgcggcaatcatgggaaca |
17418026 |
T |
|
| Q |
326 |
tgggaaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcattt |
394 |
Q |
| |
|
|| || || | | ||| | | |||||||||||| ||| ||||||||||||||||||||| |||||||| |
|
|
| T |
17418027 |
tgtcaagcttatcctttatatggtctctctgataatgaatgttggttgttgttcaaacaatatgcattt |
17418095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 134 - 398
Target Start/End: Original strand, 30520867 - 30521131
Alignment:
| Q |
134 |
gtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacacaagatagatggg |
233 |
Q |
| |
|
||||||| ||||||| |||| |||| ||||||||| ||||||||||||||||||| |||| || || |||||| ||| |||| ||||| | |||| |
|
|
| T |
30520867 |
gtgcaagaattgttggaaggtaaaagatatttgcttgttttggatgatgtgtggaacagaaatcaagaactggaatttggattaagccaagagaaatgga |
30520966 |
T |
|
| Q |
234 |
atcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgggaacatgggaaac |
333 |
Q |
| |
|
|| | |||||||| || ||||| |||||| |||||| ||||||||||| |||||||||||| ||||| |||| |||||||||||||| || | |
|
|
| T |
30520967 |
ataagttgaaatccgtgttgtcaactggatccaaaggttcatccattttagtctccactcgtgataaggatgttgctgagatcatgggaacatgccaagc |
30521066 |
T |
|
| Q |
334 |
tcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgac |
398 |
Q |
| |
|
||| | ||||||| |||| ||||| ||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
30521067 |
tcatcatttgtctggtctatctgaatatgaatgttggttgttgttcaaacaatatgcatttcgac |
30521131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 134 - 398
Target Start/End: Original strand, 30561207 - 30561471
Alignment:
| Q |
134 |
gtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacacaagatagatggg |
233 |
Q |
| |
|
||||||| ||||||| |||| |||| ||||||||| ||||||||||||||||||| |||| || || |||||| ||| |||| ||||| | |||| |
|
|
| T |
30561207 |
gtgcaagaattgttggaaggtaaaagatatttgcttgttttggatgatgtgtggaacagaaatcaagaactggaatttggattaagccaagagaaatgga |
30561306 |
T |
|
| Q |
234 |
atcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgggaacatgggaaac |
333 |
Q |
| |
|
|| | |||||||| || ||||| |||||| |||||| ||||||||||| |||||||||||| ||||| |||| |||||||||||||| || | |
|
|
| T |
30561307 |
ataagttgaaatccgtgttgtcaactggatccaaaggttcatccattttagtctccactcgtgataaggatgttgctgagatcatgggaacatgccaagc |
30561406 |
T |
|
| Q |
334 |
tcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgac |
398 |
Q |
| |
|
||| | ||||||| |||| ||||| ||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
30561407 |
tcatcatttgtctggtctatctgaatatgaatgttggttgttgttcaaacaatatgcatttcgac |
30561471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 239 - 394
Target Start/End: Complemental strand, 30476134 - 30475979
Alignment:
| Q |
239 |
ttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgggaacatgggaaactcacc |
338 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||| |||||||||||| |||||||||||| ||||| ||||| |||||||||||||| | |||| | |
|
|
| T |
30476134 |
ttgaaatctgcgttgtcatgtggatccaaaggatcttccattttagtttccactcgtgataaggatgttgcagaaatcatgggaacatgtttagctcatc |
30476035 |
T |
|
| Q |
339 |
gtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcattt |
394 |
Q |
| |
|
||| ||| |||||||||| | || |||||||||||||| | |||| |||||||| |
|
|
| T |
30476034 |
atttatctggtctctctgaaaacgaatgttggttgttgtttagacaatatgcattt |
30475979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 394
Target Start/End: Complemental strand, 17983657 - 17983502
Alignment:
| Q |
239 |
ttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgggaacatgggaaactcacc |
338 |
Q |
| |
|
||||| ||||| ||||| |||||||| ||||||| ||||||||||||||| |||||||| |||| |||| | || ||||||||||| ||||| | |
|
|
| T |
17983657 |
ttgaagtctgtgttgtcttgtggatccaaaggtacttccattttagtgtctactcgtgacatggatgttgcctcaattatgggaacatgtccaactcgtc |
17983558 |
T |
|
| Q |
339 |
gtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcattt |
394 |
Q |
| |
|
| |||| ||||||||| | ||| |||| |||||||||||||||| |||||||| |
|
|
| T |
17983557 |
ctctgtcagttctctctgacaatgaatgttagttgttgttcaaacaatatgcattt |
17983502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 30330526 - 30330611
Alignment:
| Q |
239 |
ttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgggaac |
324 |
Q |
| |
|
||||||| ||| |||||||||| ||| |||||||||| |||||| | |||||||| |||||||| | |||| || ||||||||||| |
|
|
| T |
30330526 |
ttgaaatatgtgttgtcgtgtgtatccaaaggtagtttcatttttgcgtccactcctgatgaggttgttgcgacaatcatgggaac |
30330611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 265; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 121 - 476
Target Start/End: Complemental strand, 26708209 - 26707851
Alignment:
| Q |
121 |
aatggaaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaaca |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
26708209 |
aatggaaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatatgggttaaca |
26708110 |
T |
|
| Q |
221 |
caagatagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgg |
320 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| |
|
|
| T |
26708109 |
caagatagatggaatcgtttgaaatctgttttgtcctgtggatcaaaaggtagttccattttagtgtccactcgtgataaggatgttgcaacaatcatgg |
26708010 |
T |
|
| Q |
321 |
gaacatgggaaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttaca---aagagcatacaaa |
417 |
Q |
| |
|
||||||| || ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| |
|
|
| T |
26708009 |
gaacatgccaagctcactctttgtctggtctctctgatagtgactgttggttgttgttcaaacaacatgcatttagacattacagagaagagcatacaaa |
26707910 |
T |
|
| Q |
418 |
gtttgtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
476 |
Q |
| |
|
| |||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
26707909 |
gcttgtggaaataggaaaggagatagtaaaaaaatgtaatggattacctcttgcagcaa |
26707851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 123 - 476
Target Start/End: Original strand, 20295813 - 20296169
Alignment:
| Q |
123 |
tggaaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacaca |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
20295813 |
tggaaagaaaggtgcaaggattgttgcaagggaaaatatatttgttgattttagatgatgtgtggaatcaaaatgatcaattggaatctgggttaacacc |
20295912 |
T |
|
| Q |
223 |
agatagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatggga |
322 |
Q |
| |
|
|||| |||| || |||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||| |
|
|
| T |
20295913 |
cgatatatggactcgtttgaaatctgttttgtcatgtggatcaaaaggtagttccattttagtgtcaactcgtgataaggatgttgcaacaatcatggga |
20296012 |
T |
|
| Q |
323 |
acatgggaaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttaca---aagagcatacaaagt |
419 |
Q |
| |
|
||||| || ||||| ||||||| |||||||| | ||||| |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |
|
|
| T |
20296013 |
acatgccaagctcactctttgtctggtctctcttacagtgattgttggttgttgttcaaacaacatgcatttagacattacagagaagagcatacaaagc |
20296112 |
T |
|
| Q |
420 |
ttgtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
476 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20296113 |
ttgtggaaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaa |
20296169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 136 - 394
Target Start/End: Complemental strand, 52352821 - 52352563
Alignment:
| Q |
136 |
gcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacacaagatagatgggat |
235 |
Q |
| |
|
||||| |||||||||||| |||| ||||||| || |||||||||||||||||||| |||| | |||| || || |||| ||||| | |||| | |
|
|
| T |
52352821 |
gcaagaattgttgcaaggtaaaagatatttgttggttttggatgatgtgtggaatagaaatctagaattcaaactaggattaagccaagaaaaatggaac |
52352722 |
T |
|
| Q |
236 |
catttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgggaacatgggaaactc |
335 |
Q |
| |
|
| ||||||||||| ||||| |||||||| |||||| || ||||||||| |||||| ||||| ||||| |||| || |||||||||||||| |||||| |
|
|
| T |
52352721 |
aagttgaaatctgtgttgtcctgtggatccaaaggtgcttacattttagtttccacttgtgataaggatgttgcgacaatcatgggaacatgtcaaactc |
52352622 |
T |
|
| Q |
336 |
accgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcattt |
394 |
Q |
| |
|
| | ||| ||| | ||||| || | || |||||| |||| ||||||||| |||||||| |
|
|
| T |
52352621 |
atcatttatctggcctctcagagaaggaatgttggctgttattcaaacaatatgcattt |
52352563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 251 - 393
Target Start/End: Complemental strand, 13617342 - 13617200
Alignment:
| Q |
251 |
ttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgggaacatgggaaactcaccgtttgtctagtc |
350 |
Q |
| |
|
||||| ||||||| ||||||| ||| |||||||||| ||||||||| ||| ||||| | |||||||||||||| |||||| ||||||| || |
|
|
| T |
13617342 |
ttgtcttgtggattgaaaggtacttctgttttagtgtctactcgtgatatcgatgttgcatcaatcatgggaacatgctcaactcattgtttgtcagttc |
13617243 |
T |
|
| Q |
351 |
tctctgatagtgactgttggttgttgttcaaacaacatgcatt |
393 |
Q |
| |
|
||| |||| |||| |||||||| |||||||||||| ||||||| |
|
|
| T |
13617242 |
tctatgatggtgaatgttggttattgttcaaacaatatgcatt |
13617200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 126 - 408
Target Start/End: Original strand, 25293181 - 25293457
Alignment:
| Q |
126 |
aaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacacaaga |
225 |
Q |
| |
|
||||||||||| ||| | | |||||||| |||||||||||||| |||||||| ||||||||||| ||||| | |||||||||| | ||||| ||||| |
|
|
| T |
25293181 |
aaagaaaggtgtaagaactattgcaaggtaaaatatatttgcttattttggacgatgtgtggaacaaaaatcagcaattggaattcagattaacccaaga |
25293280 |
T |
|
| Q |
226 |
tagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgggaaca |
325 |
Q |
| |
|
| || | || ||||||||||| |||||| |||||| || ||||||||||||||||||||||||||||||||| | |||| || || |||||||| |
|
|
| T |
25293281 |
aaaattgaatatgttgaaatctgtattgtcggttggatccaatcgtagttccattttagtgtccactcgtgatgaggttgttgcgacaataatgggaact |
25293380 |
T |
|
| Q |
326 |
tgggaaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttacaaaga |
408 |
Q |
| |
|
|| || |||| | |||| ||||| ||| || ||||||||||||||||||||| |||||||| ||| ||||||||| |
|
|
| T |
25293381 |
tgtcaagctcatccattgt------tctctaataacgaatgttggttgttgttcaaacaatatgcatttggacattacaaaga |
25293457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 126 - 475
Target Start/End: Complemental strand, 7100293 - 7099941
Alignment:
| Q |
126 |
aaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacacaaga |
225 |
Q |
| |
|
||||||| ||||||| | || ||||||| | || || |||| || ||||||||||||||||||| |||||||| |||| |||| || ||| ||||| |
|
|
| T |
7100293 |
aaagaaaagtgcaagaaatgatgcaaggtacaagatgtttgttggttttggatgatgtgtggaacaaaaatgaagaatttgaattcggactaaaccaaga |
7100194 |
T |
|
| Q |
226 |
tagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgggaaca |
325 |
Q |
| |
|
| |||| || | |||||||| || ||||| |||||||| ||||||| |||| |||||||||| ||||||||| |||| |||| | |||| ||||||| |
|
|
| T |
7100193 |
gaaatggaataagttgaaatcggtgttgtcatgtggatccaaaggtacttccgttttagtgtctactcgtgatatggatgttgcctcaatcacgggaaca |
7100094 |
T |
|
| Q |
326 |
tgggaaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttaca---aagagcatacaaagtttg |
422 |
Q |
| |
|
|| ||| | | |||||| |||||||||| ||| || |||||||||||||||||| |||||||| ||| ||||| |||||| | | || ||| |
|
|
| T |
7100093 |
tgcccaacccgtcctttgtcggttctctctgatcatgagtgctggttgttgttcaaacaatatgcatttggacattacagagaagagcgtgctgagcttg |
7099994 |
T |
|
| Q |
423 |
tggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagca |
475 |
Q |
| |
|
|| |||| || |||||||||||||| || ||| |||||||||||||||||| |
|
|
| T |
7099993 |
tgaaaataggcaaggagatagtaaaaaagtgtggaggattgcctcttgcagca |
7099941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 126 - 475
Target Start/End: Original strand, 7580953 - 7581305
Alignment:
| Q |
126 |
aaagaaaggtgcaaggattgttgcaagggaaaatatatttgctgattttggatgatgtgtggaatcaaaatgaacaattggaatctgggttaacacaaga |
225 |
Q |
| |
|
||||||||||||||| | |||||||||| |||| | ||||||| ||||||| ||||| |||| ||| | || |||| |||| ||| || || || |
|
|
| T |
7580953 |
aaagaaaggtgcaagaaatgttgcaaggaaaaagacgtttgctggttttggacgatgtttggataaaaagtcaagaatttgaatttggactagaccatga |
7581052 |
T |
|
| Q |
226 |
tagatgggatcatttgaaatctgttttgtcgtgtggatctaaaggtagttccattttagtgtccactcgtgatgaggatattgcaactatcatgggaaca |
325 |
Q |
| |
|
| |||| || | ||||||||||| ||||| ||||||| ||||||| |||| |||||||||| ||||||||| ||| ||||| | |||||||||||| |
|
|
| T |
7581053 |
gaaatggaataaattgaaatctgtgttgtctggtggatcgaaaggtacttccgttttagtgtctactcgtgatatggaggttgcatcaatcatgggaaca |
7581152 |
T |
|
| Q |
326 |
tgggaaactcaccgtttgtctagtctctctgatagtgactgttggttgttgttcaaacaacatgcatttcgacgttaca---aagagcatacaaagtttg |
422 |
Q |
| |
|
|| ||||| |||||| |||||||||| ||| |||||||| |||||||||||| |||||||| ||| | | | ||||| | || || ||| |
|
|
| T |
7581153 |
tgctcaactcgttctttgtcagttctctctgatgatgaatgttggttattgttcaaacaatatgcatttggacatgatagagaagagagtgcagagcttg |
7581252 |
T |
|
| Q |
423 |
tggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagca |
475 |
Q |
| |
|
||| ||| || |||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
7581253 |
tggcaataggcaaggagatagtaaaaaaatgtgcgggattgcctcttgcagca |
7581305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 7872546 - 7872494
Alignment:
| Q |
7 |
aggacaataaataaaaaagtcacacattgatctcatcacacgtctgaatcgga |
59 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7872546 |
aggacaataaataaaaaagtcacacattgatctcatcacacgtctgaatcgga |
7872494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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