View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0836_low_114 (Length: 267)
Name: NF0836_low_114
Description: NF0836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0836_low_114 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 30 - 265
Target Start/End: Complemental strand, 30582891 - 30582655
Alignment:
| Q |
30 |
gaaaataatccatgatgataaattaaacataagaatttcacatataaaatacctcaatatcaccatagattttaaaaaatattaaggagcaagcatgact |
129 |
Q |
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| T |
30582891 |
gaaaataatccatgatgataaattaaacataagaatttcacatataaaatacctcaatatcaccatagattttaaaaaatattaaggagcaagcatgact |
30582792 |
T |
|
| Q |
130 |
aatctgatcaacgaagaaatattgaatgatattctgctaataaatcattcaatctgaaaaca-aaaattacaacttttggaggtcatccaataagacatc |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |
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| T |
30582791 |
aatctgatcaacgaagaaatattgaatgatattctgctaataaatcattcaatctgaaaacaaaaaatgacaacttttggaggtcatccaataagacatc |
30582692 |
T |
|
| Q |
229 |
aatatgtgtaaaatatcgctttattttgttggagatg |
265 |
Q |
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|||||||||||||||||||||||||| | |||||||| |
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| T |
30582691 |
aatatgtgtaaaatatcgctttatttggatggagatg |
30582655 |
T |
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