View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0836_low_125 (Length: 260)
Name: NF0836_low_125
Description: NF0836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0836_low_125 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 45691532 - 45691302
Alignment:
| Q |
1 |
cctattaacaatttgaaagattttttcacttcttttgtctccagctgtaggacgtgtaaacaagatggtatccaagtggtgacatggataggaaagtgag |
100 |
Q |
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| T |
45691532 |
cctattaacaatttgaaagactttttcacttcttttgtctccagctgtaggacgtgtaaacaagatggtatccaagtggtgacatggataggaaagtgag |
45691433 |
T |
|
| Q |
101 |
tttcctcctatttatttaaccagcatggtacaaaaacaattcagcataataatgcatcctctaactggaattaattaacgtctcagtgggtttagggttg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
45691432 |
tttcctcctatttatttaaccagcatggtacaaaaacaattcagcataataatgcatcctctaactggaattaattaacgtctcaatgggtttagggttg |
45691333 |
T |
|
| Q |
201 |
tgattattgatgccatgaaaaagggtgtaaa |
231 |
Q |
| |
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||||||||||||||||||||||||||||||| |
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| T |
45691332 |
tgattattgatgccatgaaaaagggtgtaaa |
45691302 |
T |
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