View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0836_low_20 (Length: 560)

Name: NF0836_low_20
Description: NF0836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0836_low_20
NF0836_low_20
[»] chr3 (33 HSPs)
chr3 (14-384)||(35140267-35140635)
chr3 (408-518)||(35140667-35140777)
chr3 (456-521)||(49146080-49146145)
chr3 (453-528)||(49639021-49639096)
chr3 (454-528)||(21420216-21420290)
chr3 (456-529)||(17728991-17729063)
chr3 (456-529)||(19030220-19030292)
chr3 (455-520)||(43566831-43566896)
chr3 (452-511)||(16277995-16278054)
chr3 (455-518)||(35483264-35483327)
chr3 (455-521)||(24751294-24751360)
chr3 (455-521)||(33206752-33206818)
chr3 (470-519)||(9167307-9167356)
chr3 (455-528)||(32508821-32508894)
chr3 (459-520)||(40786279-40786340)
chr3 (455-520)||(50724363-50724427)
chr3 (455-520)||(50788421-50788485)
chr3 (455-503)||(14417863-14417911)
chr3 (455-519)||(34136758-34136822)
chr3 (458-521)||(36331760-36331824)
chr3 (453-513)||(41121864-41121924)
chr3 (455-519)||(42271049-42271113)
chr3 (454-513)||(8475409-8475468)
chr3 (454-521)||(16006540-16006607)
chr3 (455-513)||(13874876-13874933)
chr3 (467-521)||(20244141-20244195)
chr3 (454-503)||(2564915-2564964)
chr3 (456-521)||(13539998-13540063)
chr3 (483-528)||(14868708-14868753)
chr3 (458-503)||(29507215-29507260)
chr3 (455-503)||(17440017-17440065)
chr3 (459-503)||(34503214-34503258)
chr3 (483-519)||(43598822-43598858)
[»] chr8 (36 HSPs)
chr8 (455-520)||(6064372-6064437)
chr8 (452-520)||(2376510-2376578)
chr8 (454-521)||(24608517-24608584)
chr8 (454-521)||(25119202-25119269)
chr8 (455-521)||(9524952-9525018)
chr8 (455-521)||(15042399-15042465)
chr8 (453-518)||(39484407-39484472)
chr8 (459-528)||(43847701-43847770)
chr8 (455-521)||(1032994-1033060)
chr8 (455-521)||(17980277-17980343)
chr8 (481-527)||(25139915-25139961)
chr8 (455-521)||(27558904-27558970)
chr8 (454-503)||(28465612-28465661)
chr8 (454-503)||(34631988-34632037)
chr8 (455-503)||(23857376-23857424)
chr8 (455-499)||(25689503-25689547)
chr8 (457-520)||(36035186-36035249)
chr8 (455-519)||(40249916-40249980)
chr8 (455-519)||(43468741-43468805)
chr8 (460-523)||(7540520-7540583)
chr8 (483-521)||(4293906-4293944)
chr8 (455-521)||(4798575-4798641)
chr8 (483-521)||(5323945-5323983)
chr8 (483-513)||(7603754-7603784)
chr8 (470-528)||(30942626-30942684)
chr8 (455-528)||(5184914-5184987)
chr8 (455-500)||(7649524-7649569)
chr8 (459-528)||(26703917-26703986)
chr8 (455-500)||(29108657-29108702)
chr8 (455-500)||(41225720-41225765)
chr8 (459-528)||(42688055-42688124)
chr8 (459-503)||(9578054-9578098)
chr8 (484-520)||(13702387-13702423)
chr8 (481-521)||(21133553-21133593)
chr8 (483-519)||(35301199-35301235)
chr8 (455-499)||(40329261-40329305)
[»] chr5 (24 HSPs)
chr5 (455-528)||(32158441-32158514)
chr5 (456-528)||(18872517-18872589)
chr5 (452-528)||(27440325-27440400)
chr5 (455-502)||(4666499-4666546)
chr5 (455-528)||(19059031-19059104)
chr5 (453-521)||(33800886-33800954)
chr5 (455-518)||(20945928-20945991)
chr5 (454-528)||(18477997-18478071)
chr5 (460-513)||(29144142-29144195)
chr5 (455-508)||(29266063-29266116)
chr5 (455-520)||(40339134-40339199)
chr5 (455-528)||(42595736-42595809)
chr5 (455-503)||(29106090-29106138)
chr5 (481-521)||(36045168-36045208)
chr5 (454-521)||(42801475-42801542)
chr5 (483-521)||(4674849-4674887)
chr5 (455-513)||(29050795-29050853)
chr5 (453-518)||(33729770-33729836)
chr5 (455-513)||(36888135-36888193)
chr5 (455-528)||(2029155-2029228)
chr5 (455-520)||(6614073-6614138)
chr5 (483-528)||(37303957-37304002)
chr5 (455-503)||(22599987-22600035)
chr5 (454-502)||(27219616-27219664)
[»] chr7 (28 HSPs)
chr7 (452-528)||(46716325-46716401)
chr7 (454-521)||(22965992-22966059)
chr7 (459-528)||(30152740-30152809)
chr7 (458-518)||(2261521-2261581)
chr7 (455-519)||(29778976-29779040)
chr7 (455-513)||(21925470-21925528)
chr7 (455-521)||(34948101-34948167)
chr7 (455-521)||(44437859-44437925)
chr7 (454-528)||(46337895-46337969)
chr7 (455-512)||(4104475-4104532)
chr7 (456-513)||(5787457-5787514)
chr7 (456-521)||(11808034-11808099)
chr7 (455-520)||(36316009-36316074)
chr7 (455-520)||(43970888-43970953)
chr7 (455-518)||(8195910-8195973)
chr7 (481-528)||(24304310-24304357)
chr7 (461-520)||(27047750-27047809)
chr7 (454-504)||(22741197-22741247)
chr7 (455-521)||(23685588-23685654)
chr7 (455-521)||(30644164-30644230)
chr7 (459-521)||(47552212-47552274)
chr7 (455-513)||(49012393-49012451)
chr7 (455-528)||(7263025-7263098)
chr7 (483-528)||(24396968-24397013)
chr7 (455-504)||(34962023-34962072)
chr7 (483-519)||(2366380-2366416)
chr7 (455-503)||(38778731-38778779)
chr7 (455-503)||(45417468-45417516)
[»] chr4 (41 HSPs)
chr4 (452-520)||(56546484-56546552)
chr4 (456-520)||(52560760-52560824)
chr4 (456-527)||(55266463-55266534)
chr4 (453-503)||(20266855-20266905)
chr4 (455-521)||(47017980-47018046)
chr4 (456-513)||(534807-534864)
chr4 (455-520)||(9172406-9172471)
chr4 (454-503)||(9285711-9285760)
chr4 (453-520)||(32885681-32885748)
chr4 (453-508)||(50657873-50657928)
chr4 (455-521)||(9924851-9924917)
chr4 (456-521)||(52031202-52031268)
chr4 (454-518)||(548924-548988)
chr4 (453-513)||(24234116-24234176)
chr4 (454-521)||(13211386-13211453)
chr4 (454-509)||(43115262-43115317)
chr4 (455-513)||(4722506-4722564)
chr4 (483-521)||(8690237-8690275)
chr4 (455-521)||(20753159-20753225)
chr4 (483-521)||(36954160-36954198)
chr4 (455-521)||(45350271-45350337)
chr4 (455-521)||(45359750-45359816)
chr4 (455-513)||(46735011-46735069)
chr4 (455-513)||(50783476-50783534)
chr4 (458-520)||(56314759-56314821)
chr4 (455-503)||(438430-438479)
chr4 (468-529)||(1297861-1297922)
chr4 (454-503)||(5430417-5430466)
chr4 (455-528)||(6637749-6637821)
chr4 (483-520)||(15640478-15640515)
chr4 (455-528)||(22751004-22751077)
chr4 (455-520)||(33944398-33944463)
chr4 (458-503)||(35803145-35803190)
chr4 (456-521)||(35909197-35909262)
chr4 (483-528)||(48309168-48309213)
chr4 (454-503)||(55656160-55656209)
chr4 (467-519)||(6053987-6054039)
chr4 (455-503)||(31601801-31601849)
chr4 (459-503)||(35031382-35031426)
chr4 (481-521)||(40150494-40150534)
chr4 (455-503)||(49089329-49089377)
[»] chr2 (35 HSPs)
chr2 (455-521)||(2114469-2114535)
chr2 (453-520)||(17239894-17239961)
chr2 (455-521)||(580817-580883)
chr2 (455-521)||(10262734-10262800)
chr2 (455-521)||(36520814-36520880)
chr2 (455-520)||(3179319-3179384)
chr2 (456-513)||(18364417-18364474)
chr2 (467-520)||(44721739-44721792)
chr2 (455-523)||(2558290-2558358)
chr2 (458-528)||(917318-917388)
chr2 (454-528)||(22538533-22538607)
chr2 (455-521)||(30474229-30474295)
chr2 (455-528)||(7086248-7086321)
chr2 (470-519)||(16028144-16028193)
chr2 (456-521)||(20122509-20122574)
chr2 (483-528)||(32891622-32891667)
chr2 (458-510)||(10207643-10207695)
chr2 (455-503)||(11190151-11190199)
chr2 (453-521)||(22297486-22297554)
chr2 (453-512)||(15690077-15690136)
chr2 (454-521)||(25050274-25050341)
chr2 (455-521)||(1836583-1836649)
chr2 (455-521)||(8234826-8234892)
chr2 (483-521)||(9796920-9796958)
chr2 (455-521)||(17154644-17154710)
chr2 (475-521)||(19905689-19905735)
chr2 (453-503)||(31564088-31564138)
chr2 (483-520)||(24034088-24034125)
chr2 (454-499)||(33956250-33956295)
chr2 (455-520)||(39726469-39726534)
chr2 (487-528)||(41699129-41699170)
chr2 (460-528)||(36426883-36426951)
chr2 (458-502)||(36481067-36481111)
chr2 (452-528)||(43200832-43200908)
chr2 (485-521)||(44187729-44187765)
[»] chr1 (34 HSPs)
chr1 (458-527)||(4429510-4429579)
chr1 (455-528)||(23930571-23930644)
chr1 (454-521)||(21884569-21884636)
chr1 (454-521)||(24661976-24662043)
chr1 (455-528)||(538356-538429)
chr1 (455-528)||(11907329-11907402)
chr1 (456-520)||(48110525-48110589)
chr1 (455-518)||(49916435-49916498)
chr1 (455-521)||(15774346-15774412)
chr1 (455-521)||(27745152-27745218)
chr1 (467-521)||(37733762-37733816)
chr1 (455-521)||(49251429-49251495)
chr1 (453-502)||(5485558-5485607)
chr1 (455-520)||(18923920-18923985)
chr1 (455-520)||(37490885-37490950)
chr1 (454-503)||(38020000-38020049)
chr1 (455-519)||(4354141-4354205)
chr1 (454-518)||(40814803-40814867)
chr1 (458-521)||(749620-749683)
chr1 (458-513)||(8261717-8261772)
chr1 (455-510)||(9408659-9408714)
chr1 (454-521)||(20357454-20357521)
chr1 (454-521)||(20562434-20562501)
chr1 (467-521)||(15368812-15368866)
chr1 (455-521)||(23464020-23464086)
chr1 (483-521)||(29491493-29491531)
chr1 (459-513)||(43555916-43555970)
chr1 (466-503)||(2208690-2208727)
chr1 (454-511)||(3533017-3533074)
chr1 (455-520)||(43092148-43092213)
chr1 (455-503)||(5172654-5172702)
chr1 (455-503)||(29331216-29331264)
chr1 (473-521)||(32711178-32711225)
chr1 (455-503)||(42831942-42831990)
[»] chr6 (24 HSPs)
chr6 (456-528)||(35190759-35190831)
chr6 (454-521)||(19642581-19642648)
chr6 (454-521)||(32057028-32057095)
chr6 (455-521)||(10373590-10373656)
chr6 (455-528)||(10377151-10377224)
chr6 (455-518)||(22389787-22389850)
chr6 (455-521)||(12089092-12089158)
chr6 (467-521)||(18244046-18244100)
chr6 (477-523)||(31949857-31949903)
chr6 (456-522)||(34792877-34792942)
chr6 (458-519)||(5288381-5288442)
chr6 (452-528)||(8233078-8233154)
chr6 (455-511)||(11982757-11982813)
chr6 (454-513)||(7563618-7563677)
chr6 (459-510)||(12127954-12128005)
chr6 (455-521)||(9491769-9491835)
chr6 (467-521)||(19165358-19165412)
chr6 (475-513)||(26528582-26528620)
chr6 (455-529)||(34365730-34365804)
chr6 (483-528)||(14981729-14981774)
chr6 (455-508)||(22501013-22501066)
chr6 (467-503)||(23771040-23771076)
chr6 (453-513)||(24623515-24623575)
chr6 (455-503)||(30566053-30566101)
[»] scaffold0191 (1 HSPs)
scaffold0191 (462-528)||(16849-16914)
[»] scaffold0178 (1 HSPs)
scaffold0178 (459-521)||(4322-4384)
[»] scaffold0039 (1 HSPs)
scaffold0039 (455-521)||(101826-101892)
[»] scaffold0334 (1 HSPs)
scaffold0334 (462-503)||(5306-5347)
[»] scaffold1086 (1 HSPs)
scaffold1086 (455-503)||(2483-2531)
[»] scaffold0021 (1 HSPs)
scaffold0021 (454-502)||(108983-109031)


Alignment Details
Target: chr3 (Bit Score: 320; Significance: 1e-180; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 14 - 384
Target Start/End: Original strand, 35140267 - 35140635
Alignment:
Q  14 atattagcatttatggtttattgtccttttgtctttcatttgtctgtgatttagagaaggatgtaagcaactaagattccttaagatatgtctatggg-t 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  35140267 atattagcatttatggtttattgtccttttgtctttcatttgtctgtgatttagagaaggatgtaagcaactaagattccttaagatatgtctatgggct 35140366  T
Q  113 atggcatgtggactggcattgctttgagaatgcaaaaccccacaaggttccagcatgatacaggcagnnnnnnnnccaacgtgctgtctttggattgaga 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||    
T  35140367 atggcatgtggactggcattgctttgagaatgcaaaaccccacaaggttccagcatgatacaggcagaaaaaaa-ccaacgtgctgtctttggattgaga 35140465  T
Q  213 catgaacactcaacatcaatgttcgccaaacatgttcattctcaatgtctgagttgaatagttgattacatatgccaccgcttttcttttcctaattaag 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35140466 catgaacaatcaacatcaatgttcgccaaacatgttcattctcaatgtctgagttgaatagttgattacatatgccaccgcttttcttttcctaattaag 35140565  T
Q  313 ttatttttgtcaagtgtttacttgtactaaaaaaagtaatatatttaatacattcattttgcataagaatgt 384  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35140566 ttatttttgtcaa--gtttacttgtactaaaaaaagtaatatatttaatacattcattttgcataagaatgt 35140635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 408 - 518
Target Start/End: Original strand, 35140667 - 35140777
Alignment:
Q  408 agagaaagaagaaatgtcaaagtcatagataatttacacaagacaaagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggt 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  35140667 agagaaagaagaaatgtcaaagtcatagataatttacacaagacaaagtcccgtgagattagctcaattggttgaacaatgcattattatatgcagtggc 35140766  T
Q  508 cggggtgcgaa 518  Q
    || ||||||||    
T  35140767 cgaggtgcgaa 35140777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 456 - 521
Target Start/End: Original strand, 49146080 - 49146145
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||||| |||| ||||| | ||||||||||||||||||||| ||||||||| |||||||    
T  49146080 tcccgtgagcttaactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccc 49146145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 453 - 528
Target Start/End: Original strand, 49639021 - 49639096
Alignment:
Q  453 aagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||||| ||||||| ||||| | |||||||||||||||||| || || |||||| ||||||| ||||||    
T  49639021 aagtcccgtgagcatagctcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccgaacac 49639096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 454 - 528
Target Start/End: Complemental strand, 21420290 - 21420216
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||| |||||||| ||||| | ||||||||||||||||||||| ||||| ||| |||| |||| ||||    
T  21420290 agtcccgtgagtttagctcagttggtaggacaatgcattattatatgcagcggtcgaggttcgaatcctggacac 21420216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 456 - 529
Target Start/End: Original strand, 17728991 - 17729063
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacact 529  Q
    |||||||||||||||||||||| ||| | | ||||| ||||||||||| ||||||||| ||||||||| |||||    
T  17728991 tcccgtgagcttagctcaattgattggatattgcat-attatatgcaggggtcggggttcgaaccctggacact 17729063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 456 - 529
Target Start/End: Original strand, 19030220 - 19030292
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacact 529  Q
    |||||||||||||||||||||| ||| | | ||||| ||||||||||| ||||||||| ||||||||| |||||    
T  19030220 tcccgtgagcttagctcaattgattggatattgcat-attatatgcaggggtcggggttcgaaccctggacact 19030292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 43566896 - 43566831
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||| | ||||||| ||||| | ||||||||||||||||||||| ||||||||| ||||||    
T  43566896 gtcccgtgaacatagctcagttggtaggacaatgcattattatatgcaggggtcggggttcgaacc 43566831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 16278054 - 16277995
Alignment:
Q  452 aaagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggg 511  Q
    |||||||||||||| ||||||| ||||| | || |||||||||||||||||| |||||||    
T  16278054 aaagtcccgtgagcatagctcagttggtaggaccatgcattattatatgcaggggtcggg 16277995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 455 - 518
Target Start/End: Original strand, 35483264 - 35483327
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaa 518  Q
    ||||||||||| ||||||| || || | ||||||||||||||||||||| ||||||||| ||||    
T  35483264 gtcccgtgagcatagctcagttagtaggacaatgcattattatatgcaggggtcggggttcgaa 35483327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 24751360 - 24751294
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| || || | ||||||||||||||||||||| || |||||| |||||||    
T  24751360 gtcccgtgagcatagctcagttagtaggacaatgcattattatatgcaggggccggggttcgaaccc 24751294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 33206752 - 33206818
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| | ||||||||||||||||||||| ||  ||||| |||||||    
T  33206752 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggctggggttcgaaccc 33206818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 470 - 519
Target Start/End: Complemental strand, 9167356 - 9167307
Alignment:
Q  470 ctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaac 519  Q
    |||||||||| |||||||| |||||||||||||| ||||||||| |||||    
T  9167356 ctcaattggtagaacaatgtattattatatgcaggggtcggggttcgaac 9167307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 32508894 - 32508821
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||| || |||| ||| | | | ||||||||||||||||||| ||||||||| ||||||| ||||||    
T  32508894 gtcccgtgagcctaactcagttgataggataatgcattattatatgcaggggtcggggttcgaaccccgaacac 32508821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 40786279 - 40786340
Alignment:
Q  459 cgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||| ||||||| ||||| | ||||||||||||||||||||  ||||||||| ||||||    
T  40786279 cgtgagcatagctcagttggtaggacaatgcattattatatgcatgggtcggggttcgaacc 40786340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 520
Target Start/End: Original strand, 50724363 - 50724427
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||||| ||| ||||| ||||||    
T  50724363 gtcccgtgagcatagctcagttggtgga-caatgcattattatatgcaggggttggggttcgaacc 50724427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 50788485 - 50788421
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||||| ||||||| ||||| || |||||||||||||||||||| ||| ||||| ||||||    
T  50788485 gtcccgtgagcatagctcagttggtgga-caatgcattattatatgcaggggttggggttcgaacc 50788421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 14417863 - 14417911
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||| ||||| ||||||||||||| | |||||||||||||||||||||    
T  14417863 gtcccatgagcatagctcaattggtaggacaatgcattattatatgcag 14417911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 34136758 - 34136822
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaac 519  Q
    |||| |||||| ||||||| ||||| |||||||||||||||||||| || ||| ||||| |||||    
T  34136758 gtcctgtgagcatagctcagttggtagaacaatgcattattatatgtaggggttggggttcgaac 34136822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 521
Target Start/End: Complemental strand, 36331824 - 36331760
Alignment:
Q  458 ccgtgagcttagctcaattggttga-acaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||| ||||||||||||  |  ||||||||||||||||||||| ||||||||| |||||||    
T  36331824 ccgtgagcatagctcaattggcagggacaatgcattattatatgcaggggtcggggttcgaaccc 36331760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 513
Target Start/End: Original strand, 41121864 - 41121924
Alignment:
Q  453 aagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    ||||| ||||||| || |||| ||||| | ||||||||||||||||||||| |||||||||    
T  41121864 aagtctcgtgagcataactcagttggtaggacaatgcattattatatgcagaggtcggggt 41121924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 42271113 - 42271049
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaac 519  Q
    ||||||||||| ||||||| ||||| | |||||||||| |||||||||| || |||||| |||||    
T  42271113 gtcccgtgagcatagctcagttggtaggacaatgcattgttatatgcaggggccggggttcgaac 42271049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 513
Target Start/End: Original strand, 8475409 - 8475468
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    |||| ||||||| ||||||| ||||| | |||||||||||| |||||||| |||||||||    
T  8475409 agtctcgtgagcatagctcagttggtaggacaatgcattatgatatgcagaggtcggggt 8475468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 521
Target Start/End: Complemental strand, 16006607 - 16006540
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||||| || |||| ||||| |||||||||||||| |||||||   |||||||| |||||||    
T  16006607 agtcccgtgagcataactcagttggtagaacaatgcattataatatgcaagagtcggggttcgaaccc 16006540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 513
Target Start/End: Complemental strand, 13874933 - 13874876
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    ||||||||| | ||||||| ||||| || |||||||||||||||||||| |||||||||    
T  13874933 gtcccgtgaacatagctcagttggtgga-caatgcattattatatgcaggggtcggggt 13874876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 521
Target Start/End: Original strand, 20244141 - 20244195
Alignment:
Q  467 tagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||| ||||| | ||||||||||||||||||||| || |||||| |||||||    
T  20244141 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccc 20244195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 503
Target Start/End: Original strand, 2564915 - 2564964
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    |||||||||||| || |||| ||||| ||||| |||||||||||||||||    
T  2564915 agtcccgtgagcataactcagttggtagaacagtgcattattatatgcag 2564964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 521
Target Start/End: Complemental strand, 13540063 - 13539998
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||  ||||||| ||||| | |||||||||||||||||| || ||| ||||| |||||||    
T  13540063 tcccgtgagtatagctcagttggtaggacaatgcattattatatgtaggggttggggttcgaaccc 13539998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 528
Target Start/End: Original strand, 14868708 - 14868753
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||||||||||||| || |||||| ||||||| ||||||    
T  14868708 acaatgcattattatatgcaggggccggggttcgaaccccgaacac 14868753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 503
Target Start/End: Original strand, 29507215 - 29507260
Alignment:
Q  458 ccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||| |||| ||||| | |||||||||||||||||||||    
T  29507215 ccgtgagcttaactcagttggtaggacaatgcattattatatgcag 29507260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 17440065 - 17440017
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||| ||||||  ||||| | |||||||||||||||||||||    
T  17440065 gtcccgtgagcatagctcggttggtaggacaatgcattattatatgcag 17440017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 459 - 503
Target Start/End: Original strand, 34503214 - 34503258
Alignment:
Q  459 cgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||| ||||||| ||||| | |||||||||||||||||||||    
T  34503214 cgtgagcatagctcagttggtaggacaatgcattattatatgcag 34503258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 519
Target Start/End: Original strand, 43598822 - 43598858
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaac 519  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  43598822 acaatgcattattatatgcagaggtcggggttcgaac 43598858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 9e-22; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 455 - 520
Target Start/End: Original strand, 6064372 - 6064437
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  6064372 gtcccgtgagcttagctcaattggttggacaatgcattattatatgcaggggtcggggttcgaacc 6064437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 452 - 520
Target Start/End: Original strand, 2376510 - 2376578
Alignment:
Q  452 aaagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    |||||||||||||| ||| ||||||||| | ||||||||||||||||||||| |||| |||| ||||||    
T  2376510 aaagtcccgtgagcatagttcaattggtaggacaatgcattattatatgcaggggtccgggttcgaacc 2376578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 521
Target Start/End: Complemental strand, 24608584 - 24608517
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||||| ||||||| ||||| | ||||||||||||||||||||| || |||||| |||||||    
T  24608584 agtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccc 24608517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 521
Target Start/End: Original strand, 25119202 - 25119269
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||||| ||| ||||||||| | ||||||||||||||||||||| ||| ||||| |||||||    
T  25119202 agtcccgtgagcatagttcaattggtaggacaatgcattattatatgcaggggttggggttcgaaccc 25119269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 9524952 - 9525018
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| | ||||||||||||||||||||| || |||||| |||||||    
T  9524952 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccc 9525018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 15042465 - 15042399
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| | ||||||||||||||||||||| || |||||| |||||||    
T  15042465 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccc 15042399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 453 - 518
Target Start/End: Complemental strand, 39484472 - 39484407
Alignment:
Q  453 aagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaa 518  Q
    ||||||||||||| ||||||| ||||| | ||||||||||||||||||||| || |||||| ||||    
T  39484472 aagtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaa 39484407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 459 - 528
Target Start/End: Original strand, 43847701 - 43847770
Alignment:
Q  459 cgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||| ||||||| ||||| | ||||||||||||||||||||| || |||||| ||||||| ||||||    
T  43847701 cgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccgaacac 43847770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 1033060 - 1032994
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||  ||||||| ||||| | ||||||||||||||||||||| |||||| || |||||||    
T  1033060 gtcccgtgagtctagctcagttggtgggacaatgcattattatatgcaggggtcggagttcgaaccc 1032994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 17980277 - 17980343
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| | |||| |||||||||||||||| || |||||| |||||||    
T  17980277 gtcccgtgagcatagctcagttggtaggacaaagcattattatatgcaggggccggggttcgaaccc 17980343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 527
Target Start/End: Complemental strand, 25139961 - 25139915
Alignment:
Q  481 gaacaatgcattattatatgcagtggtcggggtgcgaaccctgaaca 527  Q
    ||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  25139961 gaacaatgcattattatatgcaggggtcggggttcgaaccccgaaca 25139915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 27558970 - 27558904
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| | | ||||||||||||||||||| ||||||| | |||||||    
T  27558970 gtcccgtgagcgtagctcatttggtaggataatgcattattatatgcaggggtcgggattcgaaccc 27558904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 454 - 503
Target Start/End: Original strand, 28465612 - 28465661
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    |||||||||||| ||||||| ||||| | |||||||||||||||||||||    
T  28465612 agtcccgtgagcatagctcagttggtaggacaatgcattattatatgcag 28465661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 454 - 503
Target Start/End: Original strand, 34631988 - 34632037
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    |||||||||  |||||||| |||||||| |||||||||||||||||||||    
T  34631988 agtcccgtgtacttagctcgattggttggacaatgcattattatatgcag 34632037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 23857424 - 23857376
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||| ||||||| ||||| | |||||||||||||||||||||    
T  23857424 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcag 23857376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 499
Target Start/End: Complemental strand, 25689547 - 25689503
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatat 499  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||    
T  25689547 gtcccgtgagcatagctcagttggttggacaatgcattattatat 25689503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 457 - 520
Target Start/End: Complemental strand, 36035249 - 36035186
Alignment:
Q  457 cccgtgagcttagctcaattggttgaa-caatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||||||||||||||||| |||  |||||||| |||||||||| ||||||||| ||||||    
T  36035249 cccgtgagcttagctcaattggtagaataaatgcatt-ttatatgcaggggtcggggttcgaacc 36035186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 40249980 - 40249916
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaac 519  Q
    ||||||||||| || |||| ||||| | ||||||||||||||||||||||| |||| || |||||    
T  40249980 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcagtgatcggagttcgaac 40249916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 43468805 - 43468741
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaac 519  Q
    ||||||||||| ||||||| ||||| | |||||||||| ||||||| || ||||||||| |||||    
T  43468805 gtcccgtgagcatagctcagttggtaggacaatgcattgttatatgtaggggtcggggttcgaac 43468741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 523
Target Start/End: Complemental strand, 7540583 - 7540520
Alignment:
Q  460 gtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctg 523  Q
    |||||| || |||| ||||| | ||||||||||||||||||||| ||||||||| | |||||||    
T  7540583 gtgagcataactcacttggtaggacaatgcattattatatgcaggggtcggggttctaaccctg 7540520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 521
Target Start/End: Original strand, 4293906 - 4293944
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  4293906 acaatgcattattatatgcaggggtcggggttcgaaccc 4293944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 4798641 - 4798575
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||  ||||||| ||||| | | ||||||||||||||||||| || |||||| |||||||    
T  4798641 gtcccgtgagtatagctcagttggtaggataatgcattattatatgcaggggccggggttcgaaccc 4798575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 521
Target Start/End: Original strand, 5323945 - 5323983
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  5323945 acaatgcattattatatgcaggggtcggggttcgaaccc 5323983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 513
Target Start/End: Original strand, 7603754 - 7603784
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggt 513  Q
    |||||||||||||||||||||||||||||||    
T  7603754 acaatgcattattatatgcagtggtcggggt 7603784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 528
Target Start/End: Complemental strand, 30942684 - 30942626
Alignment:
Q  470 ctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    |||||||| | | ||||||||||||||||||||| || |||||| ||||||| ||||||    
T  30942684 ctcaattgataggacaatgcattattatatgcaggggccggggttcgaaccccgaacac 30942626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 5184987 - 5184914
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    |||| |||||| ||||||| ||||| | |||||| |||||||||||||| ||  ||||| ||||||||| ||||    
T  5184987 gtcctgtgagcatagctcagttggtaggacaatggattattatatgcaggggctggggttcgaaccctggacac 5184914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 500
Target Start/End: Original strand, 7649524 - 7649569
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatg 500  Q
    ||||||||||| ||||||| ||||| | ||||||||||||||||||    
T  7649524 gtcccgtgagcatagctcacttggtaggacaatgcattattatatg 7649569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 528
Target Start/End: Complemental strand, 26703986 - 26703917
Alignment:
Q  459 cgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||| || |||| ||||| | ||||||||||||||||||||  ||||||||| |||| || ||||||    
T  26703986 cgtgagcataactcagttggtaggacaatgcattattatatgcaagggtcggggttcgaatcccgaacac 26703917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 500
Target Start/End: Original strand, 29108657 - 29108702
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatg 500  Q
    ||||||||||| ||||||| ||||| | ||||||||||||||||||    
T  29108657 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 29108702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 500
Target Start/End: Complemental strand, 41225765 - 41225720
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatg 500  Q
    ||||||||||| ||||||| ||||| | ||||||||||||||||||    
T  41225765 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 41225720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 528
Target Start/End: Original strand, 42688055 - 42688124
Alignment:
Q  459 cgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||| ||| ||| ||||| | |||||||||||||||||| || ||||||| | ||||||| ||||||    
T  42688055 cgtgagcatagttcagttggtaggacaatgcattattatatgtaggggtcgggattcgaaccccgaacac 42688124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 459 - 503
Target Start/End: Complemental strand, 9578098 - 9578054
Alignment:
Q  459 cgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||| ||| ||||  |||||||||||||||||||||||    
T  9578098 cgtgagcttagttcagttggcagaacaatgcattattatatgcag 9578054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 520
Target Start/End: Complemental strand, 13702423 - 13702387
Alignment:
Q  484 caatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  13702423 caatgcattattatatgcaggggtcggggttcgaacc 13702387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 521
Target Start/End: Complemental strand, 21133593 - 21133553
Alignment:
Q  481 gaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||||||||||||||||  |||||||| |||||||    
T  21133593 gaacaatgcattattatatgcaggagtcggggttcgaaccc 21133553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 519
Target Start/End: Complemental strand, 35301235 - 35301199
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaac 519  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  35301235 acaatgcattattatatgcaggggtcggggttcgaac 35301199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 499
Target Start/End: Complemental strand, 40329305 - 40329261
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatat 499  Q
    ||||||||||| ||||||  ||||| |||||||||||||||||||    
T  40329305 gtcccgtgagcatagctcggttggtagaacaatgcattattatat 40329261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 32158514 - 32158441
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||| || |||||| ||||||| ||||||    
T  32158514 gtcccgtgagcttagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaaccccgaacac 32158441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 456 - 528
Target Start/End: Original strand, 18872517 - 18872589
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    |||||||||| ||||||| ||||| | ||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  18872517 tcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccgaacac 18872589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 452 - 528
Target Start/End: Complemental strand, 27440400 - 27440325
Alignment:
Q  452 aaagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    |||||||| ||||| ||||||| ||||| | ||||||||||||||||||||||||||| ||| ||||||| ||||||    
T  27440400 aaagtccc-tgagcatagctcagttggtaggacaatgcattattatatgcagtggtcgaggttcgaaccccgaacac 27440325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 455 - 502
Target Start/End: Complemental strand, 4666546 - 4666499
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgca 502  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  4666546 gtcccgtgagcatagctcaattggtagaacaatgcattattatatgca 4666499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 19059104 - 19059031
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||| ||||||| ||||| | |||||||||||| |||||||| || |||||| ||||||||| ||||    
T  19059104 gtcccgtgagcatagctcagttggtaggacaatgcattatcatatgcaggggccggggttcgaaccctggacac 19059031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 453 - 521
Target Start/End: Original strand, 33800886 - 33800954
Alignment:
Q  453 aagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||||| || |||| ||||| | ||||||||||||||||||||| || |||||| |||||||    
T  33800886 aagtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccc 33800954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 455 - 518
Target Start/End: Complemental strand, 20945991 - 20945928
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaa 518  Q
    ||||||||||| || |||||||||| | ||||||||||||||||||||| || |||||| ||||    
T  20945991 gtcccgtgagcataactcaattggtaggacaatgcattattatatgcaggggccggggttcgaa 20945928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 528
Target Start/End: Original strand, 18477997 - 18478071
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    |||| ||||||| ||||||| ||||| | ||||||||||||||||||| | || |||||| ||||||||| ||||    
T  18477997 agtctcgtgagcatagctcagttggtaggacaatgcattattatatgctggggccggggttcgaaccctggacac 18478071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 460 - 513
Target Start/End: Original strand, 29144142 - 29144195
Alignment:
Q  460 gtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    ||||||||| |||| ||||| | ||||||||||||||||||||| |||||||||    
T  29144142 gtgagcttaactcagttggtaggacaatgcattattatatgcaggggtcggggt 29144195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 508
Target Start/End: Original strand, 29266063 - 29266116
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtc 508  Q
    ||||||||||| ||||||||||| | | ||||||||||||||||||||| ||||    
T  29266063 gtcccgtgagcatagctcaattgataggacaatgcattattatatgcaggggtc 29266116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 40339199 - 40339134
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||||| ||||||| || || | ||||||||||||||||||||| || |||||| ||||||    
T  40339199 gtcccgtgagcatagctcagttagtaggacaatgcattattatatgcaggggccggggttcgaacc 40339134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 528
Target Start/End: Original strand, 42595736 - 42595809
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||| ||||||||||||| | ||||| ||||||||||||||| |  ||||||  |||||| ||||||    
T  42595736 gtcccgtgagcatagctcaattggtaggacaatacattattatatgcagggaccggggtttgaaccccgaacac 42595809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 29106138 - 29106090
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    |||| |||||| ||||||||||||| | |||||||||||||||||||||    
T  29106138 gtcctgtgagcatagctcaattggtaggacaatgcattattatatgcag 29106090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 481 - 521
Target Start/End: Complemental strand, 36045208 - 36045168
Alignment:
Q  481 gaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  36045208 gaacaatgcattattatatgcaggggtcggggttcgaaccc 36045168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 521
Target Start/End: Complemental strand, 42801542 - 42801475
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||| | ||||||| |||||   | ||||||||||||||||||| ||||||||| |||||||    
T  42801542 agtcccgtgatcatagctcagttggtatgataatgcattattatatgcaggggtcggggttcgaaccc 42801475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 521
Target Start/End: Complemental strand, 4674887 - 4674849
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  4674887 acaatgcattattatatgcaggggtcggggttcgaaccc 4674849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 513
Target Start/End: Original strand, 29050795 - 29050853
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    |||||| |||| ||||||| ||||| | ||||||||||||||||||||| || ||||||    
T  29050795 gtcccgcgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggt 29050853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 518
Target Start/End: Original strand, 33729770 - 33729836
Alignment:
Q  453 aagtcccgtgagc-ttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaa 518  Q
    ||||||||||||| ||| |||| ||||| | ||||||||||||||||||||| || |||||| ||||    
T  33729770 aagtcccgtgagcattaactcagttggtaggacaatgcattattatatgcaggggccggggttcgaa 33729836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 513
Target Start/End: Complemental strand, 36888193 - 36888135
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    ||||||||||| || |||| ||||| | ||||||||||||||||||||| || ||||||    
T  36888193 gtcccgtgagcatatctcagttggtaggacaatgcattattatatgcaggggccggggt 36888135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 2029228 - 2029155
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||| || || | ||||| | |||||| |||||||||||||| ||||||| | ||||||| ||||||    
T  2029228 gtcccgtgagcataacttagttggtaggacaatgtattattatatgcaggggtcgggattcgaaccccgaacac 2029155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 6614138 - 6614073
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    |||||| |||| || ||||  |||| ||||||||||||||||||||||| || |||||| ||||||    
T  6614138 gtcccgcgagcataactcagctggtagaacaatgcattattatatgcaggggccggggttcgaacc 6614073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 528
Target Start/End: Original strand, 37303957 - 37304002
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    |||||| |||||||||||||| ||||||||| ||||||||| ||||    
T  37303957 acaatgtattattatatgcaggggtcggggttcgaaccctggacac 37304002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 22600035 - 22599987
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||| || |||| ||||| | |||||||||||||||||||||    
T  22600035 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcag 22599987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 454 - 502
Target Start/End: Complemental strand, 27219664 - 27219616
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgca 502  Q
    |||||||||||| ||||| | ||||| | ||||||||||||||||||||    
T  27219664 agtcccgtgagcatagcttagttggtaggacaatgcattattatatgca 27219616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 452 - 528
Target Start/End: Original strand, 46716325 - 46716401
Alignment:
Q  452 aaagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||| || ||||| ||||||| ||||| | ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  46716325 aaagttccatgagcatagctcagttggtaggacaatgcattattatatgcagaggtcggggttcgaaccctgaacac 46716401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 521
Target Start/End: Complemental strand, 22966059 - 22965992
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||||||| || || ||| |||||||    
T  22966059 agtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccgaggttcgaaccc 22965992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 459 - 528
Target Start/End: Original strand, 30152740 - 30152809
Alignment:
Q  459 cgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||||||| ||||| | |||||||||||||||||  || ||||||||| ||||||| ||||||    
T  30152740 cgtgagcttagctcagttggtaggacaatgcattattatatataggggtcggggttcgaaccccgaacac 30152809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 458 - 518
Target Start/End: Complemental strand, 2261581 - 2261521
Alignment:
Q  458 ccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaa 518  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||| || |||||| ||||    
T  2261581 ccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaa 2261521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 29778976 - 29779040
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaac 519  Q
    ||||||||||| ||||||||||||| | | ||||||||||||||||||| |||||| || |||||    
T  29778976 gtcccgtgagcatagctcaattggtaggataatgcattattatatgcaggggtcggagttcgaac 29779040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 513
Target Start/End: Original strand, 21925470 - 21925528
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||| ||  |||||||||    
T  21925470 gtcccgtgagcatagctcaattggtaggacaatgcattattatatacataggtcggggt 21925528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 34948101 - 34948167
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| | |||||||||||| ||||||||||| || ||| |||||||    
T  34948101 gtcccgtgagcatagctcagttggtaggacaatgcattatcatatgcagtggccgaggttcgaaccc 34948167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 44437925 - 44437859
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| || || | ||||||||||||||||||||| || |||||| |||||||    
T  44437925 gtcccgtgagcatagctcagttagtaggacaatgcattattatatgcaggggccggggttcgaaccc 44437859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 528
Target Start/End: Complemental strand, 46337969 - 46337895
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    |||||||||| | ||| ||| ||||| | ||||||||||||||||||||| | ||||||| ||||||||| ||||    
T  46337969 agtcccgtgaacatagttcagttggtaggacaatgcattattatatgcagggatcggggttcgaaccctggacac 46337895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 512
Target Start/End: Original strand, 4104475 - 4104532
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcgggg 512  Q
    ||||||||||| ||||||||||| | | ||||||||||||||||||||  ||||||||    
T  4104475 gtcccgtgagcatagctcaattgttaggacaatgcattattatatgcaagggtcgggg 4104532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 456 - 513
Target Start/End: Original strand, 5787457 - 5787514
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    |||||||||  ||||||||||||| | ||||||||||||||||||||| || ||||||    
T  5787457 tcccgtgagtatagctcaattggtaggacaatgcattattatatgcaggggccggggt 5787514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 456 - 521
Target Start/End: Original strand, 11808034 - 11808099
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||||||||||||||||| |    ||||||| |||||||||| ||||||||| |||||||    
T  11808034 tcccgtgagcttagctcaattggtagggacatgcattgttatatgcaggggtcggggttcgaaccc 11808099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 36316074 - 36316009
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||||| ||||||| ||||| | | ||||||||||||||||||| || |||||| ||||||    
T  36316074 gtcccgtgagcatagctcagttggtaggataatgcattattatatgcaggggccggggttcgaacc 36316009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 43970953 - 43970888
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||||| || |||| ||||| |||||||||||||||||||||||  | |||||| ||||||    
T  43970953 gtcccgtgagcataactcagttggtagaacaatgcattattatatgcagaagacggggttcgaacc 43970888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 518
Target Start/End: Original strand, 8195910 - 8195973
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaa 518  Q
    ||||||||||| ||||||| ||||| | ||||||||||||||||| ||| || |||||| ||||    
T  8195910 gtcccgtgagcatagctcagttggtaggacaatgcattattatatccaggggccggggttcgaa 8195973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 528
Target Start/End: Complemental strand, 24304357 - 24304310
Alignment:
Q  481 gaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||||||||||||||| ||||||||| ||||| | ||||||    
T  24304357 gaacaatgcattattatatgcaggggtcggggttcgaactccgaacac 24304310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 461 - 520
Target Start/End: Complemental strand, 27047809 - 27047750
Alignment:
Q  461 tgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||| ||||||| ||||| | ||||||||||||||||||||| || |||||| ||||||    
T  27047809 tgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaacc 27047750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 504
Target Start/End: Original strand, 22741197 - 22741247
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagt 504  Q
    |||||||||||| ||||||  ||||| | ||||||||||||||||||||||    
T  22741197 agtcccgtgagcatagctcggttggtaggacaatgcattattatatgcagt 22741247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 23685654 - 23685588
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||| ||||| ||||||| ||| | | ||||||||||||||||||||| || |||||| |||||||    
T  23685654 gtcccatgagcatagctcagttgataggacaatgcattattatatgcaggggccggggttcgaaccc 23685588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 30644164 - 30644230
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||  ||||||| ||||| | ||||||||||||||||||||| || ||| || |||||||    
T  30644164 gtcccgtgagtatagctcagttggtaggacaatgcattattatatgcaggggccggtgttcgaaccc 30644230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 521
Target Start/End: Original strand, 47552212 - 47552274
Alignment:
Q  459 cgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||| ||||||| ||||| | ||||||||||||||||||||  || |||||| |||||||    
T  47552212 cgtgagcatagctcagttggtaggacaatgcattattatatgcaagggccggggttcgaaccc 47552274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 513
Target Start/End: Original strand, 49012393 - 49012451
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    ||||||||||| ||||||| ||||| | |||||||||||||||||| || |||| ||||    
T  49012393 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgaaggggtcagggt 49012451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 7263098 - 7263025
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||  ||||||| ||||| | |||||||||||||||||| || ||| || || ||||||| ||||||    
T  7263098 gtcccgtgagtatagctcagttggtaggacaatgcattattatatgtagaggttggagttcgaaccccgaacac 7263025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 528
Target Start/End: Original strand, 24396968 - 24397013
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||||||||||||| |||||| || ||||||||| ||||    
T  24396968 acaatgcattattatatgcaggggtcggagttcgaaccctggacac 24397013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 504
Target Start/End: Complemental strand, 34962072 - 34962023
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagt 504  Q
    |||| |||||| ||||||| ||||| | ||||||||||||||||||||||    
T  34962072 gtcctgtgagcatagctcagttggtaggacaatgcattattatatgcagt 34962023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 519
Target Start/End: Original strand, 2366380 - 2366416
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaac 519  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  2366380 acaatgcattattatatgcaggggtcggggttcgaac 2366416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 38778779 - 38778731
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||| || |||| ||||| | |||||||||||||||||||||    
T  38778779 gtcccgtgagcatatctcagttggtaggacaatgcattattatatgcag 38778731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 45417468 - 45417516
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||| ||||||| ||||  |||||||| ||||||||||||||    
T  45417468 gtcccgtgagcatagctcagttggcagaacaatgtattattatatgcag 45417516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 452 - 520
Target Start/End: Complemental strand, 56546552 - 56546484
Alignment:
Q  452 aaagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    |||||||||||||| ||||||||||||| | ||||||||||||||||||||| || |||||| ||||||    
T  56546552 aaagtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaacc 56546484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 456 - 520
Target Start/End: Original strand, 52560760 - 52560824
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||| || |||||| ||||||    
T  52560760 tcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaacc 52560824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 456 - 527
Target Start/End: Complemental strand, 55266534 - 55266463
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaaca 527  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||||| |||||| || |||| || |||||    
T  55266534 tcccgtgagcatagctcagttggtagaacaatgcattattatatgcaggggtcggagttcgaatcccgaaca 55266463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 453 - 503
Target Start/End: Original strand, 20266855 - 20266905
Alignment:
Q  453 aagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||||||||||||| ||||| | |||||||||||||||||||||    
T  20266855 aagtcccgtgagcttagctcatttggtaggacaatgcattattatatgcag 20266905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 47018046 - 47017980
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| | ||||||||||||||||||||| || |||||| |||||||    
T  47018046 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccc 47017980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 456 - 513
Target Start/End: Complemental strand, 534864 - 534807
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    |||||||||| ||||||||||||| | ||||||||| ||||||||||| |||||||||    
T  534864 tcccgtgagcatagctcaattggtaggacaatgcatcattatatgcaggggtcggggt 534807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 9172471 - 9172406
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||||| || |||| ||||| | ||||||||||||||||||||| ||||||||| ||||||    
T  9172471 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaacc 9172406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 454 - 503
Target Start/End: Complemental strand, 9285760 - 9285711
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||||    
T  9285760 agtcccgtgagcatagctcaattggtaggacaatgcattattatatgcag 9285711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 453 - 520
Target Start/End: Original strand, 32885681 - 32885748
Alignment:
Q  453 aagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    |||| |||||||| ||||||| ||||| | ||||||||||||||||||||| |||||| || ||||||    
T  32885681 aagttccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcggagttcgaacc 32885748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 453 - 508
Target Start/End: Original strand, 50657873 - 50657928
Alignment:
Q  453 aagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtc 508  Q
    ||||||||||||| ||||||| ||||| | ||||||||||||||||||||| ||||    
T  50657873 aagtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtc 50657928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 9924851 - 9924917
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||| ||| ||||| | |||| |||||||||||||||| ||||||||| |||||||    
T  9924851 gtcccgtgagcatagttcagttggtaggacaacgcattattatatgcaggggtcggggttcgaaccc 9924917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 521
Target Start/End: Original strand, 52031202 - 52031268
Alignment:
Q  456 tcccgtgagcttagctcaattggttg-aacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||||||||||| ||||  | |||||||||||| ||||||||| ||||||||| |||||||    
T  52031202 tcccgtgagcttagctcagttggcaggaacaatgcattagtatatgcaggggtcggggttcgaaccc 52031268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 518
Target Start/End: Complemental strand, 548988 - 548924
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaa 518  Q
    |||||||||||| |||| || ||||| | ||||||||||||||||||||| || |||||| ||||    
T  548988 agtcccgtgagcatagcccagttggtaggacaatgcattattatatgcaggggccggggttcgaa 548924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 513
Target Start/End: Complemental strand, 24234176 - 24234116
Alignment:
Q  453 aagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    ||||||||||||| ||||||| ||||| |  |||||||||||||||||||| || ||||||    
T  24234176 aagtcccgtgagcatagctcagttggtaggtcaatgcattattatatgcaggggccggggt 24234116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 521
Target Start/End: Complemental strand, 13211453 - 13211386
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||||  ||| ||| ||||| | ||||||||||||||||||||  ||||||||| |||||||    
T  13211453 agtcccgtgagtatagttcagttggtaggacaatgcattattatatgcatgggtcggggttcgaaccc 13211386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 509
Target Start/End: Original strand, 43115262 - 43115317
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcg 509  Q
    |||||||||||||||| ||| ||||| | |||||| |||||||||||||| |||||    
T  43115262 agtcccgtgagcttagttcagttggtaggacaatgtattattatatgcaggggtcg 43115317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 513
Target Start/End: Complemental strand, 4722564 - 4722506
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    ||||||||| | ||||||| ||||| | ||||||||||||||||||||| || ||||||    
T  4722564 gtcccgtgaacatagctcagttggtaggacaatgcattattatatgcagaggccggggt 4722506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 521
Target Start/End: Original strand, 8690237 - 8690275
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  8690237 acaatgcattattatatgcaggggtcggggttcgaaccc 8690275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 20753225 - 20753159
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| | | |||||||||||||||| || || |||||| |||||||    
T  20753225 gtcccgtgagcatagctcagttggtaggaaaatgcattattatatgtaggggccggggttcgaaccc 20753159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 521
Target Start/End: Original strand, 36954160 - 36954198
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  36954160 acaatgcattattatatgcaggggtcggggttcgaaccc 36954198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 45350271 - 45350337
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||| ||| ||||||| ||||| | ||| ||||||||||||||||| |||||| || |||||||    
T  45350271 gtcccgtcagcatagctcagttggtaggacagtgcattattatatgcagaggtcggagttcgaaccc 45350337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 45359750 - 45359816
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||| ||| ||||||| ||||| | ||| ||||||||||||||||| |||||| || |||||||    
T  45359750 gtcccgtcagcatagctcagttggtaggacagtgcattattatatgcagaggtcggagttcgaaccc 45359816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 513
Target Start/End: Complemental strand, 46735069 - 46735011
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    ||||||||||| ||||||| ||||| | ||| ||||||||||||||||| | |||||||    
T  46735069 gtcccgtgagcatagctcagttggtaggacactgcattattatatgcagggatcggggt 46735011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 513
Target Start/End: Complemental strand, 50783534 - 50783476
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    ||||||||||| ||||||| ||||| | ||| |||||||||||||||||  ||||||||    
T  50783534 gtcccgtgagcatagctcagttggtaggacattgcattattatatgcaggcgtcggggt 50783476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 520
Target Start/End: Original strand, 56314759 - 56314821
Alignment:
Q  458 ccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    |||||| | ||| ||||||||| | ||||||||||||||||||||| |||| |||| ||||||    
T  56314759 ccgtgatcatagttcaattggtaggacaatgcattattatatgcaggggtcagggttcgaacc 56314821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 438479 - 438430
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaac-aatgcattattatatgcag 503  Q
    ||||||||||| ||||||| ||||| |||| |||||||||||||||||||    
T  438479 gtcccgtgagcatagctcagttggtagaacaaatgcattattatatgcag 438430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 529
Target Start/End: Original strand, 1297861 - 1297922
Alignment:
Q  468 agctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacact 529  Q
    |||||| ||||| | ||||  ||||||||||||||| ||||||| | |||||||||||||||    
T  1297861 agctcagttggtaggacaacacattattatatgcaggggtcgggattcgaaccctgaacact 1297922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 503
Target Start/End: Complemental strand, 5430466 - 5430417
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    |||||||||||| ||||||| ||||| | |||||| ||||||||||||||    
T  5430466 agtcccgtgagcatagctcagttggtaggacaatgtattattatatgcag 5430417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 6637821 - 6637749
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||| |||| || || || ||||||| ||||||||||||||| ||| ||||| ||||||| ||||||    
T  6637821 gtcccgtgagcatagc-cagttcgtagaacaatacattattatatgcaggggttggggttcgaaccccgaacac 6637749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 520
Target Start/End: Complemental strand, 15640515 - 15640478
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  15640515 acaatgcattattatatgcagtgttcggggttcgaacc 15640478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 528
Target Start/End: Original strand, 22751004 - 22751077
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||| ||||||| || || |  |||||| ||||||||||||| ||||||||| | ||||| ||||||    
T  22751004 gtcccgtgagcatagctcagttcgtaggtcaatgcgttattatatgcaggggtcggggttcaaaccccgaacac 22751077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 33944463 - 33944398
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||||| || |||| ||||| | | ||||||||||||||||||| || |||||| ||||||    
T  33944463 gtcccgtgagcataactcagttggtaggataatgcattattatatgcaggggccggggttcgaacc 33944398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 503
Target Start/End: Complemental strand, 35803190 - 35803145
Alignment:
Q  458 ccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    |||| ||| ||||||||||||| | |||||||||||||||||||||    
T  35803190 ccgtaagcatagctcaattggtaggacaatgcattattatatgcag 35803145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 521
Target Start/End: Complemental strand, 35909262 - 35909197
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||| | ||| ||| ||||| | ||||| ||||||||||||||| ||||||||| |||||||    
T  35909262 tcccgtgaacatagttcagttggtaggacaatacattattatatgcagaggtcggggttcgaaccc 35909197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 528
Target Start/End: Original strand, 48309168 - 48309213
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||||||||||||| |||| | || ||||||||||||||    
T  48309168 acaatgcattattatatgcaggggtctgagttcgaaccctgaacac 48309213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 503
Target Start/End: Complemental strand, 55656209 - 55656160
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    |||||||||||| || |||| ||||||| ||||| |||||||||||||||    
T  55656209 agtcccgtgagcataactcagttggttggacaatacattattatatgcag 55656160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 519
Target Start/End: Original strand, 6053987 - 6054039
Alignment:
Q  467 tagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaac 519  Q
    ||||||| ||||| | ||||||||||||||||||||| || |||||| |||||    
T  6053987 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaac 6054039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 31601801 - 31601849
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||  ||||||| ||||| |||||||| ||||||||||||||    
T  31601801 gtcccgtgagtatagctcagttggtagaacaatgtattattatatgcag 31601849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 459 - 503
Target Start/End: Original strand, 35031382 - 35031426
Alignment:
Q  459 cgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||| ||||||| ||||| | |||||||||||||||||||||    
T  35031382 cgtgagcatagctcagttggtaggacaatgcattattatatgcag 35031426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 521
Target Start/End: Original strand, 40150494 - 40150534
Alignment:
Q  481 gaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||||||||||| ||| ||||||||| |||||||    
T  40150494 gaacaatgcattattatatacaggggtcggggttcgaaccc 40150534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 49089377 - 49089329
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||||||||| | ||||| | ||||| |||||||||||||||    
T  49089377 gtcccgtgagcttagcttagttggtaggacaatacattattatatgcag 49089329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 2114535 - 2114469
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| || ||||||||| |||||||    
T  2114535 gtcccgtgagcatagctcagttggtagaacaatgcattattatatgtaggggtcggggttcgaaccc 2114469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 453 - 520
Target Start/End: Original strand, 17239894 - 17239961
Alignment:
Q  453 aagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||| ||||| ||||||| ||||| ||||||||||||||||||||||| ||||||| | ||||||    
T  17239894 aagtcccatgagcatagctcagttggtagaacaatgcattattatatgcaggggtcgggattcgaacc 17239961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 580883 - 580817
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| | ||||||||||||||||||||| || |||||| |||||||    
T  580883 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccc 580817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 10262734 - 10262800
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| || |||| ||||| | ||||||||||||||||||||| ||||||||| |||||||    
T  10262734 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccc 10262800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 36520880 - 36520814
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| | |||||||||||||||||| || ||||||||| |||||||    
T  36520880 gtcccgtgagcgtagctcagttggtaggacaatgcattattatatgtaggggtcggggttcgaaccc 36520814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 520
Target Start/End: Original strand, 3179319 - 3179384
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||||| || |||| ||||| ||||||||||||||||||||||| ||||| ||| ||||||    
T  3179319 gtcccgtgagcataactcagttggtagaacaatgcattattatatgcaggggtcgaggttcgaacc 3179384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 456 - 513
Target Start/End: Complemental strand, 18364474 - 18364417
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    |||||||||| ||||| | ||||| ||||||||||||||||||||||| |||||||||    
T  18364474 tcccgtgagcatagctgagttggtagaacaatgcattattatatgcaggggtcggggt 18364417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 467 - 520
Target Start/End: Complemental strand, 44721792 - 44721739
Alignment:
Q  467 tagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  44721792 tagctcagttggtagaacaatgcattattatatgcaggggtcggggttcgaacc 44721739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 523
Target Start/End: Complemental strand, 2558358 - 2558290
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctg 523  Q
    ||||||||||  ||||||||||||| | |||||||||||||||||| || |||| |||| |||||||||    
T  2558358 gtcccgtgagaatagctcaattggtaggacaatgcattattatatgtaggggtcagggttcgaaccctg 2558290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 528
Target Start/End: Complemental strand, 917388 - 917318
Alignment:
Q  458 ccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||| |||| ||||| ||   |||||||||||||||||| ||||||| | ||||||||||||||    
T  917388 ccgtgagcttaactcagttggtagagacatgcattattatatgcaggggtcgggattcgaaccctgaacac 917318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 528
Target Start/End: Original strand, 22538533 - 22538607
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    |||||||||||| || |||| ||||| | ||||||||||||||||||||| ||| ||||| |||| || ||||||    
T  22538533 agtcccgtgagcctaactcagttggtaggacaatgcattattatatgcaggggttggggttcgaatcccgaacac 22538607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 30474295 - 30474229
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| | ||||||||||||||||||||| || || ||| |||||||    
T  30474295 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccgaggttcgaaccc 30474229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 528
Target Start/End: Original strand, 7086248 - 7086321
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||| ||||||| ||||| |  |||||||||||||||||||| || |||| | ||||||| ||||||    
T  7086248 gtcccgtgagcatagctcagttggtagggcaatgcattattatatgcaggggccgggattcgaaccccgaacac 7086321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 470 - 519
Target Start/End: Complemental strand, 16028193 - 16028144
Alignment:
Q  470 ctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaac 519  Q
    |||| ||||| | ||||||||||||||||||||||||||||||| |||||    
T  16028193 ctcagttggtaggacaatgcattattatatgcagtggtcggggttcgaac 16028144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 456 - 521
Target Start/End: Complemental strand, 20122574 - 20122509
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||| ||||||| ||||| | |||||||||||||||||| || || |||||| |||||||    
T  20122574 tcccgtgagcatagctcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccc 20122509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 483 - 528
Target Start/End: Original strand, 32891622 - 32891667
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  32891622 acaatgcattattatatgcaggggttggggttcgaaccctgaacac 32891667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 510
Target Start/End: Original strand, 10207643 - 10207695
Alignment:
Q  458 ccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcgg 510  Q
    |||||||| ||||||| ||||| | | ||||||||||||||||||||||||||    
T  10207643 ccgtgagcatagctcagttggtaggataatgcattattatatgcagtggtcgg 10207695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 11190199 - 11190151
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||| |||||||||| || || ||||||||||||||||||||    
T  11190199 gtcccgtgagcatagctcaattcgtagaccaatgcattattatatgcag 11190151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 521
Target Start/End: Complemental strand, 22297554 - 22297486
Alignment:
Q  453 aagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||| ||||||| ||||||| ||||| | ||||||||||||||||||||| ||  ||||| |||||||    
T  22297554 aagtctcgtgagcatagctcagttggtaggacaatgcattattatatgcaggggcaggggttcgaaccc 22297486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 512
Target Start/End: Complemental strand, 15690136 - 15690077
Alignment:
Q  453 aagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcgggg 512  Q
    ||||||||||||| ||||||| ||||| | |||||||||| |||||||||| || |||||    
T  15690136 aagtcccgtgagcatagctcagttggtaggacaatgcattgttatatgcaggggacgggg 15690077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 521
Target Start/End: Complemental strand, 25050341 - 25050274
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||| |||||| ||||||| ||||| | | ||||||||||||||||||| ||||||| | |||||||    
T  25050341 agtccagtgagcatagctcagttggtaggataatgcattattatatgcaggggtcgggattcgaaccc 25050274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 1836583 - 1836649
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| | |||||||||||||||||| ||   ||||||| |||||||    
T  1836583 gtcccgtgagcctagctcagttggtaggacaatgcattattatatgaaggaatcggggttcgaaccc 1836649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 8234892 - 8234826
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| | ||||| |||||||||||| || || |||||| |||||||    
T  8234892 gtcccgtgagcatagctcagttggtaggacaatacattattatatgtaggggccggggttcgaaccc 8234826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 521
Target Start/End: Original strand, 9796920 - 9796958
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  9796920 acaatgcattattatatgcaggggtcggggttcgaaccc 9796958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 17154644 - 17154710
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| || |||  ||||| | ||||||||||||||||||||| || |||||| |||||||    
T  17154644 gtcccgtgagcataactcggttggtaggacaatgcattattatatgcaggggccggggttcgaaccc 17154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 475 - 521
Target Start/End: Complemental strand, 19905735 - 19905689
Alignment:
Q  475 ttggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||| ||||||||||||||||| ||| ||||||||| |||||||    
T  19905735 ttggttggacaatgcattattatatacaggggtcggggttcgaaccc 19905689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 503
Target Start/End: Original strand, 31564088 - 31564138
Alignment:
Q  453 aagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||||| || |||| ||||| | |||||||||||||||||||||    
T  31564088 aagtcccgtgagcataactcagttggtaggacaatgcattattatatgcag 31564138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 520
Target Start/End: Complemental strand, 24034125 - 24034088
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  24034125 acaatgcattattatatgcaggggtcggggttcgaacc 24034088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 499
Target Start/End: Original strand, 33956250 - 33956295
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatat 499  Q
    |||||||||||| || |||||||||| | |||||||||||||||||    
T  33956250 agtcccgtgagcataactcaattggtaggacaatgcattattatat 33956295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 39726534 - 39726469
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||||  ||||||| ||||| | |||||||||||||||||| || ||||| ||| ||||||    
T  39726534 gtcccgtgagtctagctcagttggtaggacaatgcattattatatgtaggggtcgaggttcgaacc 39726469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 528
Target Start/End: Original strand, 41699129 - 41699170
Alignment:
Q  487 tgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||    
T  41699129 tgcattattatatgcaggggtcggggttcgaaccccgaacac 41699170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 36426951 - 36426883
Alignment:
Q  460 gtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    |||||| ||||||| ||||| | |||||||||||||||||| || ||| ||||| ||||| | ||||||    
T  36426951 gtgagcatagctcacttggtaggacaatgcattattatatgtaggggttggggttcgaactccgaacac 36426883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 458 - 502
Target Start/End: Original strand, 36481067 - 36481111
Alignment:
Q  458 ccgtgagcttagctcaattggttgaacaatgcattattatatgca 502  Q
    |||||||| ||||||| ||||| | ||||||||||||||||||||    
T  36481067 ccgtgagcatagctcagttggtaggacaatgcattattatatgca 36481111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 452 - 528
Target Start/End: Original strand, 43200832 - 43200908
Alignment:
Q  452 aaagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||| |||| | ||||||| ||||| |||||||  |||||||||||||| || ||| || ||||||| ||||||    
T  43200832 aaagtccagtgaacatagctcagttggtagaacaatatattattatatgcaggggccggagttcgaaccccgaacac 43200908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 521
Target Start/End: Original strand, 44187729 - 44187765
Alignment:
Q  485 aatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  44187729 aatgcattattatatgcaggggtcggggttcgaaccc 44187765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 4429579 - 4429510
Alignment:
Q  458 ccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaaca 527  Q
    |||||||| ||||||| ||||| | ||||||||||||||||||||| ||| ||||| |||||||||||||    
T  4429579 ccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggttggggttcgaaccctgaaca 4429510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 23930644 - 23930571
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||| ||| ||| ||||| | ||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  23930644 gtcccgtgagcatagttcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccctggacac 23930571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 521
Target Start/End: Original strand, 21884569 - 21884636
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||||||| || || ||| |||||||    
T  21884569 agtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccgaggttcgaaccc 21884636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 521
Target Start/End: Original strand, 24661976 - 24662043
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||||||| |||| || | |||||||    
T  24661976 agtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggtcaggattcgaaccc 24662043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 538429 - 538356
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||| ||| ||| ||||| ||||||||||||||||||||||| || ||| || ||||||| ||||||    
T  538429 gtcccgtgagcatagttcagttggtagaacaatgcattattatatgcaggggccggagttcgaaccccgaacac 538356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 11907402 - 11907329
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||| || || |||| |||| ||||||||||||||||||||| || |||||| ||||||| ||||||    
T  11907402 gtcccgtgagcataacttaattagttggacaatgcattattatatgcagaggccggggttcgaaccccgaacac 11907329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 456 - 520
Target Start/End: Original strand, 48110525 - 48110589
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||||| ||| || || ||||||    
T  48110525 tcccgtgagcgtagctcagttggtagaacaatgcattattatatgcaggggttggagttcgaacc 48110589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 455 - 518
Target Start/End: Original strand, 49916435 - 49916498
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaa 518  Q
    ||||||||||| ||| ||||||||| | |||||||||||||||||| || ||||||||| ||||    
T  49916435 gtcccgtgagcatagatcaattggtaggacaatgcattattatatgtaggggtcggggttcgaa 49916498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 15774412 - 15774346
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| || |||| ||||| | |||||||||||||||||| || ||||||||| |||||||    
T  15774412 gtcccgtgagcataactcagttggtaggacaatgcattattatatgtaggggtcggggttcgaaccc 15774346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 27745152 - 27745218
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| | | ||||||||||||||||||| | ||||||| |||||||    
T  27745152 gtcccgtgagcatagctcatttggtaggaaaatgcattattatatgcagggatcggggttcgaaccc 27745218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 521
Target Start/End: Original strand, 37733762 - 37733816
Alignment:
Q  467 tagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||| ||||| | |||||||||||||||||||||||| |||||| |||||||    
T  37733762 tagctcagttggtaggacaatgcattattatatgcagtggacggggttcgaaccc 37733816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 49251495 - 49251429
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||| |||||| || |||| ||||| | ||||||||||||||||||||| ||||||||| |||||||    
T  49251495 gtcctgtgagcataactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccc 49251429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 453 - 502
Target Start/End: Complemental strand, 5485607 - 5485558
Alignment:
Q  453 aagtcccgtgagcttagctcaattggttgaacaatgcattattatatgca 502  Q
    ||||||||||||  ||||||||||||| ||||||| ||||||||||||||    
T  5485607 aagtcccgtgagaatagctcaattggtagaacaatacattattatatgca 5485558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 18923985 - 18923920
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||||| ||||||| ||||| | ||||||||||||||||||||| | || |||| ||||||    
T  18923985 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcagggttcagggttcgaacc 18923920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 520
Target Start/End: Original strand, 37490885 - 37490950
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||||||||| || |||| ||||| | ||||||||||||||||||||| || |||||| ||||||    
T  37490885 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggccggggtacgaacc 37490950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 454 - 503
Target Start/End: Complemental strand, 38020049 - 38020000
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    |||||||||||| ||||||| ||||| | |||||||||||||||||||||    
T  38020049 agtcccgtgagcatagctcagttggtaggacaatgcattattatatgcag 38020000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 4354205 - 4354141
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaac 519  Q
    |||| |||||| ||||||| ||||| | ||||||||||||||||||||| || |||||| |||||    
T  4354205 gtcctgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaac 4354141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 518
Target Start/End: Complemental strand, 40814867 - 40814803
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaa 518  Q
    |||||||||||| ||||||| || ||   ||||||||||||||||||||| ||||||||| ||||    
T  40814867 agtcccgtgagcatagctcagttagtaagacaatgcattattatatgcaggggtcggggttcgaa 40814803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 521
Target Start/End: Complemental strand, 749683 - 749620
Alignment:
Q  458 ccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||| || |||| ||||| |||||||||||||||||||| || ||| ||||| |||||||    
T  749683 ccgtgagcataactcagttggtcgaacaatgcattattatatgtaggggttggggttcgaaccc 749620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 513
Target Start/End: Complemental strand, 8261772 - 8261717
Alignment:
Q  458 ccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    |||||||| ||||||| ||||| | | ||||||||||||||||||| |||||||||    
T  8261772 ccgtgagcatagctcagttggtaggataatgcattattatatgcaggggtcggggt 8261717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 510
Target Start/End: Complemental strand, 9408714 - 9408659
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcgg 510  Q
    ||||||||||| ||||||| ||||| | |||||||||||||| |||||| ||||||    
T  9408714 gtcccgtgagcatagctcagttggtaggacaatgcattattaaatgcaggggtcgg 9408659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 521
Target Start/End: Original strand, 20357454 - 20357521
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||||| || |||| ||||| | ||||||||||||||||||||| ||  ||||| |||||||    
T  20357454 agtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggctggggttcgaaccc 20357521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 521
Target Start/End: Complemental strand, 20562501 - 20562434
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||||| || |||| ||||| | ||||||||||||||||||||| ||  ||||| |||||||    
T  20562501 agtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggctggggttcgaaccc 20562434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 521
Target Start/End: Original strand, 15368812 - 15368866
Alignment:
Q  467 tagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||| ||||| | ||||||||||||||||||||| || |||||| |||||||    
T  15368812 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccc 15368866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 23464086 - 23464020
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||| ||||| ||| ||| ||||| | ||||||||||||||||||||| || |||||| |||||||    
T  23464086 gtcccatgagcatagttcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccc 23464020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 521
Target Start/End: Original strand, 29491493 - 29491531
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  29491493 acaatgcattattatatgcaggggtcggggttcgaaccc 29491531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 43555970 - 43555916
Alignment:
Q  459 cgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    ||||||| ||||||| ||||| | ||||||||||||||||||||| | |||||||    
T  43555970 cgtgagcatagctcagttggtaggacaatgcattattatatgcagggatcggggt 43555916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 503
Target Start/End: Complemental strand, 2208727 - 2208690
Alignment:
Q  466 ttagctcaattggttgaacaatgcattattatatgcag 503  Q
    |||||||||||||| | |||||||||||||||||||||    
T  2208727 ttagctcaattggtaggacaatgcattattatatgcag 2208690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 3533074 - 3533017
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggg 511  Q
    |||||||||||| ||||||| || || | |||||||||||||||||| || |||||||    
T  3533074 agtcccgtgagcatagctcagttagtaggacaatgcattattatatgtaggggtcggg 3533017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 520
Target Start/End: Original strand, 43092148 - 43092213
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaacc 520  Q
    ||||| ||||| || |||||||||| | | ||| ||||||||||||||| ||||||||| ||||||    
T  43092148 gtcccatgagcataactcaattggtaggataatacattattatatgcaggggtcggggttcgaacc 43092213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 5172702 - 5172654
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||| ||||||| ||| | | |||||||||||||||||||||    
T  5172702 gtcccgtgagcatagctcagttgataggacaatgcattattatatgcag 5172654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 29331264 - 29331216
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||| ||||| | ||||| | |||||||||||||||||||||    
T  29331264 gtcccgtgagcatagcttagttggtaggacaatgcattattatatgcag 29331216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 473 - 521
Target Start/End: Complemental strand, 32711225 - 32711178
Alignment:
Q  473 aattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||| ||||||||||||||||||||||| || |||||| |||||||    
T  32711225 aattggtagaacaatgcattattatatgcag-ggccggggttcgaaccc 32711178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 42831942 - 42831990
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||| ||||||| ||||| | ||| |||||||||||||||||    
T  42831942 gtcccgtgagcatagctcagttggtaggacattgcattattatatgcag 42831990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 456 - 528
Target Start/End: Original strand, 35190759 - 35190831
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    |||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||||| || ||||||| ||||||    
T  35190759 tcccatgagcatagctcagttggtagaacaatgcattattatatgcaggggtcggagttcgaaccccgaacac 35190831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 521
Target Start/End: Complemental strand, 19642648 - 19642581
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||||| ||||||| ||||| | ||||||||||||||||||||  ||||||||| |||||||    
T  19642648 agtcccgtgagcatagctcagttggtaggacaatgcattattatatgcatcggtcggggttcgaaccc 19642581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 521
Target Start/End: Original strand, 32057028 - 32057095
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    |||||||||||| ||||||| ||| | | ||||||||||||||||||||||||||| ||| |||||||    
T  32057028 agtcccgtgagcatagctcagttgataggacaatgcattattatatgcagtggtcgaggttcgaaccc 32057095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 10373590 - 10373656
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| || || | ||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  10373590 gtcccgtgagcataacttagttggtagaacaatgcattattatatgcaggggtcggggttcgaaccc 10373656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 10377224 - 10377151
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||  ||||||| ||||| | ||||||||||||||||||||| || |||||| ||||||| ||||||    
T  10377224 gtcccgtgagtatagctcagttggtaggacaatgcattattatatgcagaggccggggttcgaaccccgaacac 10377151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 455 - 518
Target Start/End: Complemental strand, 22389850 - 22389787
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaa 518  Q
    ||||||||||| ||||||| ||||| | ||||||||||||||||||||| |||| |||| ||||    
T  22389850 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcagggttcgaa 22389787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 12089092 - 12089158
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| ||||||| ||||| | ||||||||||||||||||||| || ||| || |||||||    
T  12089092 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccc 12089158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 521
Target Start/End: Complemental strand, 18244100 - 18244046
Alignment:
Q  467 tagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||| ||||| | ||||||||||||||||||||| ||||||||| |||||||    
T  18244100 tagctcagttggtaggacaatgcattattatatgcagaggtcggggttcgaaccc 18244046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 477 - 523
Target Start/End: Complemental strand, 31949903 - 31949857
Alignment:
Q  477 ggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctg 523  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  31949903 ggttggacaatgcattattatatgcaggggtcggggttcgaaccctg 31949857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 522
Target Start/End: Complemental strand, 34792942 - 34792877
Alignment:
Q  456 tcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccct 522  Q
    |||||||||| ||||||| ||||| || |||||||||||||||||||| |||| |||| ||||||||    
T  34792942 tcccgtgagcatagctcagttggtgga-caatgcattattatatgcaggggtctgggttcgaaccct 34792877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 5288442 - 5288381
Alignment:
Q  458 ccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaac 519  Q
    |||||||| || |||| ||||| | ||||||||||||||||||||| ||||||||| |||||    
T  5288442 ccgtgagcataactcagttggtaggacaatgcattattatatgcaggggtcggggtccgaac 5288381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 528
Target Start/End: Original strand, 8233078 - 8233154
Alignment:
Q  452 aaagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    |||||||||||||| ||||||| ||||| | ||||| ||||||||||| ||| |||| |||| ||||| | ||||||    
T  8233078 aaagtcccgtgagcatagctcagttggtaggacaatacattattatatacagaggtcagggttcgaactccgaacac 8233154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 511
Target Start/End: Original strand, 11982757 - 11982813
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggg 511  Q
    |||||| |||| ||||||| ||||| ||| ||||||||||||||||||| |||||||    
T  11982757 gtcccgggagcatagctcagttggtagaataatgcattattatatgcaggggtcggg 11982813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 513
Target Start/End: Complemental strand, 7563677 - 7563618
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    |||||||||||| ||||||| ||||| | |||||||||||||| |||||| |||| ||||    
T  7563677 agtcccgtgagcatagctcagttggtaggacaatgcattattacatgcaggggtcagggt 7563618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 510
Target Start/End: Complemental strand, 12128005 - 12127954
Alignment:
Q  459 cgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcgg 510  Q
    ||||||| ||||||| ||||| | ||||||||||||||||||||| ||||||    
T  12128005 cgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcgg 12127954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 9491835 - 9491769
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| || |||| ||||| | |||||||||||||||||| || || |||||| |||||||    
T  9491835 gtcccgtgagcataactcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccc 9491769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 521
Target Start/End: Original strand, 19165358 - 19165412
Alignment:
Q  467 tagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||| ||||| | ||||||||||||||||||||| ||| ||||| |||||||    
T  19165358 tagctcagttggtaggacaatgcattattatatgcagaggttggggttcgaaccc 19165412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 475 - 513
Target Start/End: Original strand, 26528582 - 26528620
Alignment:
Q  475 ttggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  26528582 ttggtagaacaatgcattattatatgcaggggtcggggt 26528620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 529
Target Start/End: Original strand, 34365730 - 34365804
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacact 529  Q
    ||||||||||| ||| ||| ||||| | ||||||||||||||| ||||| || |||||| ||||||  |||||||    
T  34365730 gtcccgtgagcatagttcagttggtaggacaatgcattattatgtgcaggggccggggttcgaacctcgaacact 34365804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 528
Target Start/End: Complemental strand, 14981774 - 14981729
Alignment:
Q  483 acaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    ||||||||||||||||||||| || |||||| ||||||||| ||||    
T  14981774 acaatgcattattatatgcaggggccggggttcgaaccctggacac 14981729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 508
Target Start/End: Original strand, 22501013 - 22501066
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtc 508  Q
    ||||| ||||| ||||||| ||||| | ||||||||||||||||||||| ||||    
T  22501013 gtcccatgagcatagctcagttggtaggacaatgcattattatatgcaggggtc 22501066  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 503
Target Start/End: Original strand, 23771040 - 23771076
Alignment:
Q  467 tagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||||| | |||||||||||||||||||||    
T  23771040 tagctcaattggtaggacaatgcattattatatgcag 23771076  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 513
Target Start/End: Original strand, 24623515 - 24623575
Alignment:
Q  453 aagtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggt 513  Q
    ||||||| ||| | ||||||| ||||| | ||||||||||||||||||||  |||||||||    
T  24623515 aagtcccatgaacatagctcagttggtaggacaatgcattattatatgcaagggtcggggt 24623575  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 30566053 - 30566101
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||| || |||| ||||| | |||||||||||||||||||||    
T  30566053 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcag 30566101  T

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Target: scaffold0191 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 528
Target Start/End: Original strand, 16849 - 16914
Alignment:
Q  462 gagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccctgaacac 528  Q
    |||| ||||||| ||||| | ||||||||||||||||||||| |||| |||| ||||||| ||||||    
T  16849 gagcatagctcagttggtaggacaatgcattattatatgcaggggtc-gggttcgaaccccgaacac 16914  T

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Target: scaffold0178 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 521
Target Start/End: Original strand, 4322 - 4384
Alignment:
Q  459 cgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||| ||||||| ||| | | ||||| ||||||||||||||| ||||||||| |||||||    
T  4322 cgtgagcatagctcagttgataggacaatacattattatatgcaggggtcggggttcgaaccc 4384  T

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Target: scaffold0039 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 101826 - 101892
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcagtggtcggggtgcgaaccc 521  Q
    ||||||||||| |||||||  |||| | | ||||||||||||||||||| || |||||| |||||||    
T  101826 gtcccgtgagcatagctcagctggtaggataatgcattattatatgcaggggccggggttcgaaccc 101892  T

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Target: scaffold0334 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 503
Target Start/End: Original strand, 5306 - 5347
Alignment:
Q  462 gagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    |||| ||||||||||||| | |||||||||||||||||||||    
T  5306 gagcatagctcaattggtaggacaatgcattattatatgcag 5347  T

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Target: scaffold1086 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 2483 - 2531
Alignment:
Q  455 gtcccgtgagcttagctcaattggttgaacaatgcattattatatgcag 503  Q
    ||||||||||| || |||| ||||| | |||||||||||||||||||||    
T  2483 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcag 2531  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 454 - 502
Target Start/End: Complemental strand, 109031 - 108983
Alignment:
Q  454 agtcccgtgagcttagctcaattggttgaacaatgcattattatatgca 502  Q
    |||||||| ||| ||| ||| ||||| ||||||||||||||||||||||    
T  109031 agtcccgtaagcatagttcacttggtagaacaatgcattattatatgca 108983  T

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