View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0836_low_70 (Length: 351)
Name: NF0836_low_70
Description: NF0836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0836_low_70 |
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Alignment Details
Target: chr7 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 149 - 272
Target Start/End: Original strand, 26328262 - 26328385
Alignment:
| Q |
149 |
acttgtaaacatgtgaaagcaatgctccatcaatgagatggacatcatcaaaatagaaaagtaagaaaatcagtaaaagacaaatttgattggagtatac |
248 |
Q |
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| T |
26328262 |
acttgtaaacatgtgaaagcaatgctccatcaaaagcaagaaaaccatcaaaatagaaaagtaagaaaattagtaaaagacaaatttgattggagtatac |
26328361 |
T |
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| Q |
249 |
taatactatgaactagcaacagct |
272 |
Q |
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| T |
26328362 |
tgatactatgaactagcaacagct |
26328385 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 26328140 - 26328190
Alignment:
| Q |
29 |
acaaatgataatctttcaagtttcttataggtaaatagagaattaactatc |
79 |
Q |
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|||||||||||||||||| ||||||||||| |||||||||||||||||||| |
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| T |
26328140 |
acaaatgataatctttcaggtttcttatagataaatagagaattaactatc |
26328190 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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