View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0836_low_84 (Length: 325)
Name: NF0836_low_84
Description: NF0836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0836_low_84 |
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Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 26878929 - 26878609
Alignment:
| Q |
1 |
tggtcaccttgagtgattaatgttgcataatcatgcactgaaagtgaatggttcatattgtatttatattgtgtatgcattcagacaccctctaagagtt |
100 |
Q |
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| T |
26878929 |
tggtcaccttgagtgattaatgttgcataatcatgcagtgaaagtgaatggttcaaattgtatttatattgtgtatgcattcagacaccctctaagagtt |
26878830 |
T |
|
| Q |
101 |
tgctctcaagagtgttc--cacttctgagattttggagtttttggtagtgtgtcctttaggtccaatacaccaattagggtggcctattttccctttagg |
198 |
Q |
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||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
26878829 |
tgctctcaagagtgtcccacacttctgagattttggagtttttggtagtgtgtcctttagatccaatacaccaattagggtggcctattttccctttagg |
26878730 |
T |
|
| Q |
199 |
tctgtggacattgaacgttctcaagaatggcgaagataacgtattatattctttcattttgagttag--atgaattcacataataaagtagttgattatg |
296 |
Q |
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| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
26878729 |
ac-gtggacattgaacgttctcaagaatggcgaagataacgtattatattctttcattttgagttagatatgaattcacataataaagtagttgattatg |
26878631 |
T |
|
| Q |
297 |
ccattacatttgtaatattttt |
318 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
26878630 |
ccattacatttgtaatattttt |
26878609 |
T |
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