View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0837_high_18 (Length: 233)
Name: NF0837_high_18
Description: NF0837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0837_high_18 |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 14065417 - 14065642
Alignment:
| Q |
1 |
aattgtccaatttagaccatctttttcaactaatgaagctgaactcgaacctatgatggtagaacctctaaataagagatactatgagaataatatccat |
100 |
Q |
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| T |
14065417 |
aattgtccaatttagaccatctttttcaactaatgaagctgaactcgaacctatgatggtagaacctctaaatatgagatactatgagaataatatccat |
14065516 |
T |
|
| Q |
101 |
cttggatttttacatcagttcagccaaatgatattttagtgacatatatttagagatcaaacaagcatctcttcaagatgaccacaattaggctattaat |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14065517 |
cttggatttttacatcagttcagccaaatgattttttagtgacatatatttagagatcaaacaagcatctcttcaagatgaccacaattaggctattaat |
14065616 |
T |
|
| Q |
201 |
agcctaaccaagattgtcgcaggagg |
226 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
14065617 |
agcctaaccaagattgtcgcaggagg |
14065642 |
T |
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