View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0837_low_4 (Length: 543)

Name: NF0837_low_4
Description: NF0837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0837_low_4
NF0837_low_4
[»] chr2 (28 HSPs)
chr2 (6-514)||(30696756-30697265)
chr2 (23-242)||(25210226-25210445)
chr2 (22-239)||(34544335-34544552)
chr2 (73-273)||(40734574-40734773)
chr2 (71-200)||(29656798-29656927)
chr2 (100-211)||(13531875-13531986)
chr2 (23-211)||(35965183-35965372)
chr2 (71-197)||(11958912-11959038)
chr2 (41-166)||(13954612-13954737)
chr2 (41-166)||(14095819-14095944)
chr2 (41-194)||(34214726-34214878)
chr2 (26-200)||(35248448-35248618)
chr2 (160-245)||(38342537-38342622)
chr2 (87-218)||(40359257-40359388)
chr2 (184-305)||(6027849-6027968)
chr2 (100-162)||(17845493-17845555)
chr2 (158-239)||(37999467-37999548)
chr2 (160-245)||(43371539-43371624)
chr2 (26-158)||(31600873-31601005)
chr2 (160-211)||(30978913-30978964)
chr2 (183-229)||(6164507-6164553)
chr2 (159-281)||(24414114-24414236)
chr2 (160-229)||(3547152-3547221)
chr2 (279-342)||(25213956-25214020)
chr2 (54-169)||(35409248-35409361)
chr2 (279-342)||(37106807-37106871)
chr2 (114-166)||(37309828-37309880)
chr2 (159-239)||(42798012-42798092)
[»] chr5 (22 HSPs)
chr5 (6-245)||(17153000-17153239)
chr5 (23-281)||(40187640-40187897)
chr5 (41-229)||(18451920-18452108)
chr5 (71-229)||(16311328-16311485)
chr5 (43-221)||(29664839-29665017)
chr5 (23-169)||(35583965-35584110)
chr5 (23-281)||(38972770-38973028)
chr5 (100-195)||(12457442-12457537)
chr5 (31-211)||(7350460-7350640)
chr5 (100-245)||(6810083-6810228)
chr5 (150-281)||(12834557-12834688)
chr5 (26-169)||(457467-457606)
chr5 (183-281)||(23044974-23045072)
chr5 (131-245)||(32574957-32575071)
chr5 (31-169)||(27900496-27900632)
chr5 (71-169)||(8020511-8020609)
chr5 (177-223)||(18116547-18116593)
chr5 (177-223)||(43523761-43523807)
chr5 (12-169)||(24207527-24207681)
chr5 (158-281)||(4920809-4920932)
chr5 (158-281)||(12866534-12866657)
chr5 (279-342)||(4583233-4583297)
[»] chr6 (23 HSPs)
chr6 (31-245)||(9402445-9402658)
chr6 (31-172)||(1947882-1948023)
chr6 (23-169)||(14321717-14321861)
chr6 (44-220)||(8320838-8321014)
chr6 (26-245)||(20348916-20349134)
chr6 (55-245)||(29341131-29341326)
chr6 (31-137)||(34346140-34346246)
chr6 (158-281)||(27738755-27738878)
chr6 (139-245)||(256510-256616)
chr6 (127-281)||(13769024-13769178)
chr6 (158-224)||(11762428-11762494)
chr6 (177-279)||(18908895-18908997)
chr6 (24-169)||(2126715-2126860)
chr6 (128-239)||(10925467-10925578)
chr6 (182-281)||(28079678-28079777)
chr6 (158-210)||(10142571-10142623)
chr6 (82-169)||(34179102-34179190)
chr6 (158-245)||(24602874-24602961)
chr6 (182-229)||(29199919-29199966)
chr6 (159-245)||(32053072-32053158)
chr6 (158-223)||(12309555-12309620)
chr6 (158-210)||(10188126-10188178)
chr6 (185-281)||(17546884-17546980)
[»] chr8 (22 HSPs)
chr8 (18-200)||(8545412-8545594)
chr8 (18-223)||(29918450-29918655)
chr8 (24-199)||(36274892-36275066)
chr8 (26-200)||(28345342-28345516)
chr8 (6-245)||(17084125-17084366)
chr8 (41-169)||(6388599-6388727)
chr8 (94-245)||(30903965-30904116)
chr8 (26-226)||(5700207-5700407)
chr8 (134-279)||(14155491-14155636)
chr8 (88-245)||(9476031-9476188)
chr8 (41-281)||(27777180-27777421)
chr8 (82-169)||(12468312-12468399)
chr8 (158-281)||(15173862-15173985)
chr8 (158-281)||(29108804-29108927)
chr8 (100-199)||(17108301-17108400)
chr8 (159-281)||(24927933-24928055)
chr8 (160-281)||(15068570-15068690)
chr8 (279-342)||(29089889-29089953)
chr8 (165-281)||(37960944-37961060)
chr8 (100-170)||(5793510-5793580)
chr8 (78-196)||(39379646-39379763)
chr8 (184-281)||(2183588-2183685)
[»] chr4 (50 HSPs)
chr4 (41-239)||(33516097-33516296)
chr4 (12-169)||(33616210-33616367)
chr4 (7-245)||(21713994-21714232)
chr4 (24-239)||(42907742-42907956)
chr4 (41-196)||(8843872-8844027)
chr4 (41-196)||(8856836-8856991)
chr4 (22-169)||(17113098-17113244)
chr4 (41-245)||(25941012-25941214)
chr4 (23-210)||(9280943-9281130)
chr4 (23-244)||(12075651-12075872)
chr4 (118-254)||(40420595-40420730)
chr4 (26-169)||(21956909-21957051)
chr4 (26-169)||(25265242-25265384)
chr4 (23-265)||(35304515-35304757)
chr4 (71-174)||(36306687-36306790)
chr4 (41-168)||(36918996-36919122)
chr4 (112-282)||(4741198-4741367)
chr4 (151-281)||(19883039-19883169)
chr4 (18-246)||(37926410-37926636)
chr4 (51-223)||(9929208-9929380)
chr4 (182-281)||(14605908-14606007)
chr4 (53-171)||(39086040-39086157)
chr4 (160-281)||(45065240-45065361)
chr4 (31-174)||(7334275-7334416)
chr4 (26-162)||(30034531-30034667)
chr4 (100-211)||(37384204-37384314)
chr4 (407-497)||(26166513-26166603)
chr4 (127-281)||(10302041-10302196)
chr4 (102-201)||(25298896-25298994)
chr4 (159-281)||(11028063-11028185)
chr4 (188-254)||(15733536-15733602)
chr4 (177-282)||(50684475-50684580)
chr4 (279-342)||(36919243-36919307)
chr4 (160-272)||(37246836-37246948)
chr4 (279-342)||(42299908-42299972)
chr4 (82-202)||(43553354-43553479)
chr4 (177-224)||(30266370-30266417)
chr4 (177-224)||(30285771-30285818)
chr4 (158-245)||(48459470-48459557)
chr4 (87-198)||(53906747-53906856)
chr4 (143-245)||(6268489-6268591)
chr4 (159-281)||(6382255-6382377)
chr4 (158-224)||(47550393-47550459)
chr4 (127-169)||(50376446-50376488)
chr4 (160-229)||(10574454-10574523)
chr4 (159-224)||(43893218-43893283)
chr4 (72-200)||(12505594-12505722)
chr4 (22-225)||(23927680-23927880)
chr4 (177-229)||(29527820-29527872)
chr4 (127-281)||(43309442-43309595)
[»] chr7 (26 HSPs)
chr7 (23-281)||(3156936-3157194)
chr7 (26-193)||(11472783-11472949)
chr7 (78-243)||(43550437-43550600)
chr7 (6-228)||(3773905-3774127)
chr7 (71-211)||(23475315-23475456)
chr7 (31-169)||(29292553-29292701)
chr7 (71-211)||(19440062-19440203)
chr7 (31-174)||(31345387-31345530)
chr7 (71-211)||(23533655-23533797)
chr7 (100-221)||(4101472-4101593)
chr7 (160-281)||(31425998-31426119)
chr7 (177-281)||(18683981-18684085)
chr7 (159-281)||(27063127-27063249)
chr7 (23-137)||(37217857-37217971)
chr7 (160-281)||(27063324-27063445)
chr7 (160-281)||(30839116-30839237)
chr7 (166-281)||(12980373-12980488)
chr7 (158-281)||(17885453-17885576)
chr7 (182-281)||(27896457-27896556)
chr7 (141-223)||(8265713-8265794)
chr7 (160-246)||(28309482-28309568)
chr7 (159-281)||(35074459-35074581)
chr7 (159-224)||(17851843-17851908)
chr7 (177-245)||(21750789-21750857)
chr7 (177-281)||(22973395-22973499)
chr7 (182-226)||(25979954-25979998)
[»] chr1 (22 HSPs)
chr1 (18-245)||(39219102-39219329)
chr1 (23-211)||(41477004-41477192)
chr1 (31-199)||(36421623-36421791)
chr1 (23-171)||(13692493-13692642)
chr1 (134-279)||(13798198-13798343)
chr1 (23-198)||(42729009-42729184)
chr1 (127-246)||(48125700-48125819)
chr1 (167-281)||(44615457-44615571)
chr1 (167-281)||(44792998-44793112)
chr1 (31-204)||(8880305-8880478)
chr1 (23-211)||(25154879-25155067)
chr1 (6-162)||(16903353-16903503)
chr1 (160-244)||(10450078-10450162)
chr1 (110-169)||(33293614-33293673)
chr1 (164-229)||(12718806-12718870)
chr1 (177-281)||(23058469-23058573)
chr1 (81-209)||(23719510-23719637)
chr1 (158-281)||(29871267-29871390)
chr1 (158-281)||(51421842-51421965)
chr1 (159-281)||(12494995-12495117)
chr1 (73-205)||(25181102-25181235)
chr1 (184-225)||(35069927-35069968)
[»] scaffold0244 (1 HSPs)
scaffold0244 (41-169)||(4674-4802)
[»] scaffold1322 (1 HSPs)
scaffold1322 (23-169)||(960-1105)
[»] chr3 (19 HSPs)
chr3 (23-169)||(27252416-27252561)
chr3 (71-169)||(37032192-37032290)
chr3 (134-283)||(42243346-42243495)
chr3 (24-220)||(772837-773032)
chr3 (90-246)||(30904833-30904988)
chr3 (31-169)||(3414627-3414765)
chr3 (31-169)||(3385950-3386088)
chr3 (100-254)||(27937664-27937817)
chr3 (23-169)||(26207135-26207278)
chr3 (158-281)||(4557287-4557410)
chr3 (182-281)||(10043264-10043363)
chr3 (158-281)||(44172609-44172732)
chr3 (158-281)||(44179309-44179432)
chr3 (158-281)||(39728654-39728777)
chr3 (159-245)||(34119640-34119726)
chr3 (12-118)||(34592993-34593099)
chr3 (158-223)||(17146190-17146255)
chr3 (159-224)||(31126834-31126899)
chr3 (127-211)||(40890299-40890382)
[»] scaffold0005 (1 HSPs)
scaffold0005 (182-281)||(211371-211470)
[»] scaffold0264 (1 HSPs)
scaffold0264 (102-245)||(17473-17616)
[»] scaffold0008 (2 HSPs)
scaffold0008 (192-281)||(67766-67855)
scaffold0008 (192-281)||(75609-75698)
[»] scaffold0013 (2 HSPs)
scaffold0013 (160-229)||(105503-105572)
scaffold0013 (160-229)||(128155-128224)
[»] scaffold0184 (1 HSPs)
scaffold0184 (184-281)||(2978-3075)
[»] scaffold0036 (1 HSPs)
scaffold0036 (182-275)||(33400-33493)
[»] scaffold0007 (1 HSPs)
scaffold0007 (265-306)||(197296-197337)
[»] scaffold0157 (1 HSPs)
scaffold0157 (72-200)||(14755-14883)


Alignment Details
Target: chr2 (Bit Score: 402; Significance: 0; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 6 - 514
Target Start/End: Original strand, 30696756 - 30697265
Alignment:
Q  6 aggagcagagaaaggttgagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgag 105  Q
    ||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  30696756 aggagaagagagaggttgagagtgtgagatacgagaggagaaaatagagaactatggtaagagaatgtcatatgaaagaccgagactctaactgtgtgag 30696855  T
Q  106 tgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggataca 205  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  30696856 tgacatgatttagggtttgaatttctatttatataaaatgggtaataaattgattttttacatttgggataggtttgggtatgagttcggggtgggtaca 30696955  T
Q  206 tatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtc-aaacccgtcaaattgggtttgtttcg 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30696956 tatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaaacccgtcaaattgggtttgtttcg 30697055  T
Q  305 gatgggtacccgtaaatatgagtttgttgtcatgcctattcttatttaatttctaagaaacctaattttctatttaagtcttccgaataaacccaattac 404  Q
    |   ||||||||||| || |||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  30697056 ggcaggtacccgtaagtacgagtttgttaccatgcctactcttatttaatttctaagaaacctaattttctatttaagtcttctgaataaacccaataac 30697155  T
Q  405 ctaaatattattactatatgcactccacatcttcagtaagcgacttcctcaacccgtgattcttctgactttttcaagctctcacgatacgatctaaaag 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30697156 ctaaatattattactatatgcactccacatcttcagtaagcgacttccttaacccgtgattcttccgactttttcaagctctcacgatacgatctaaaag 30697255  T
Q  505 tccatgattc 514  Q
    ||||||||||    
T  30697256 tccatgattc 30697265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 23 - 242
Target Start/End: Original strand, 25210226 - 25210445
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| |||  |||| ||| ||||| ||| ||||||| |||| || || ||||| |||  | ||||||| |||| ||||||||| |||||||||| ||    
T  25210226 gagagtgtgagccatgaaaggtgaaaagagataactatgataagtgagtgccatctaaaattctgagactccgactgtgtgagtgaaatgatttagggtt 25210325  T
Q  123 tggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccg 222  Q
    ||  ||||||||||| |||||||||||| |||||||||||||||||| ||||  ||||  |||||| ||| ||||||| ||||||||||   ||||||||    
T  25210326 tgagtttctatttatataaaatgggtaacaaattgattttctacattcgggaggggttttggtatgggtttggggtgggtacatatatcctcgttacccg 25210425  T
Q  223 tctcgtatccatgttttaaa 242  Q
    || | || || |||||||||    
T  25210426 tcccatacccgtgttttaaa 25210445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 34544552 - 34544335
Alignment:
Q  22 tgagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggtt 121  Q
    |||||||| ||||||||  ||||| ||| |||||||||||  ||| || |||||||| ||||| ||||| |||   | ||||| ||| || ||||||| |    
T  34544552 tgagagtgtgagatatggaaggagtaaagagagaactatgagaagtgattgtcatctaaaagaacgagagtctcgttgtgtgaatgaaattatttagggt 34544453  T
Q  122 ttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttaccc 221  Q
    |||  ||| ||||||| ||||||||||||||||| ||||||||||||| ||||  |||| | |||||||||  | |||| ||  |||||||||||||| |    
T  34544452 ttgagtttttatttatataaaatgggtaataaatagattttctacattcgggaggggtttgagtatgagttttgtgtgggtatctatatctctgttacac 34544353  T
Q  222 gtctcgtatccatgtttt 239  Q
     |||||||||| ||||||    
T  34544352 atctcgtatccgtgtttt 34544335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 40734773 - 40734574
Alignment:
Q  73 tcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttat-ttaaaatgggtaataaattgattttctacatttg 171  Q
    |||| |||||||| |||||||||||| ||||||||| |||||||||| ||| | ||| ||||||| |||| |  |||| |||||| ||||||| ||||      
T  40734773 tcatttgaaagactgagactctgactgtgtgagtgaaatgatttagggttttggtttttatttatattaaga--ggtagtaaattaattttctgcattca 40734676  T
Q  172 ggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaa 271  Q
     |  |||||  | |||||||||||| ||||| ||||||||||||||||||||||| || || ||||| ||||||  |||||||| |||  ||||| ||||    
T  40734675 aggcaggtttagatatgagttcgggatggattcatatatctctgttacccgtctcatacccgtgtttgaaaatcgctgaaaacccaaattcatacccaaa 40734576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 200
Target Start/End: Complemental strand, 29656927 - 29656798
Alignment:
Q  71 tgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacattt 170  Q
    ||||||||||||||| |||||| ||||| ||||||| | |||||||||| ||  | ||| ||||||| ||||| || ||||||||||||||| |||||||    
T  29656927 tgtcatctgaaagactgagactttgactgtgtgagtcaaatgatttagggttatggtttttatttatataaaagggataataaattgattttatacattt 29656828  T
Q  171 gggataggttcgggtatgagttcggggtgg 200  Q
    | || || || | |||||||||||||||||    
T  29656827 gagacagatttgtgtatgagttcggggtgg 29656798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 211
Target Start/End: Original strand, 13531875 - 13531986
Alignment:
Q  100 tgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtg 199  Q
    ||||||||| |||||||||| ||||  ||||||||||| |||||||| ||||||||||||||||||||| ||||   |||| | || || ||||||||||    
T  13531875 tgtgagtgaaatgatttagggtttgagtttctatttatataaaatggataataaattgattttctacatgtggggcgggtttgagtgtgggttcggggtg 13531974  T
Q  200 gatacatatatc 211  Q
     |||||||||||    
T  13531975 aatacatatatc 13531986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 211
Target Start/End: Original strand, 35965183 - 35965372
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| ||||||||  |||||| || ||||||||||| |||| |||||| |||||||| || ||||  || ||| | ||||||| |||||||| |  |    
T  35965183 gagagtgtgagatatggaaggagataaaagagaactatgataagtgaatgttatctgaaaaactgagatcctcactgtatgagtgaaatgatttatggat 35965282  T
Q  123 tggatttctatttatt-taaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatc 211  Q
    |  ||| ||||||| | ||||| ||| ||||||||||||||||||||| ||||  |||| ||||||| |||||| |||| ||||| ||||    
T  35965283 tcaattcctatttagtataaaaggggcaataaattgattttctacattcgggacgggtttgggtatgggttcggagtgggtacatgtatc 35965372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 11958912 - 11959038
Alignment:
Q  71 tgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacattt 170  Q
    |||||||||||||||||||||||| ||| ||| ||| | ||||| |||||||||  |||||  |||| |||||  ||||||||||||||||| ||||||     
T  11958912 tgtcatctgaaagaccgagactctaactgtgtaagttaaatgatctaggttttgagtttctgcttatataaaagaggtaataaattgattttatacattc 11959011  T
Q  171 gggataggttcgggtatgagttcgggg 197  Q
      |||  ||| ||||||||||||||||    
T  11959012 atgatgagtttgggtatgagttcgggg 11959038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 166
Target Start/End: Original strand, 13954612 - 13954737
Alignment:
Q  41 aggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttattta 140  Q
    ||||||||| ||||||||||  |||| || ||||||||||||| | |||||||| ||   |||||||| |||||||||| || |  ||||||||||| ||    
T  13954612 aggagaaaagagagaactatcataagtgagtgtcatctgaaagtctgagactctcaccgagtgagtgaaatgatttagggttcgagtttctatttatata 13954711  T
Q  141 aaatgggtaataaattgattttctac 166  Q
    |||  |||||||| ||||||||||||    
T  13954712 aaagtggtaataagttgattttctac 13954737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 166
Target Start/End: Original strand, 14095819 - 14095944
Alignment:
Q  41 aggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttattta 140  Q
    ||||||||| ||||||||||  |||| || ||||||||||||| | |||||||| ||   |||||||| |||||||||| || |  ||||||||||| ||    
T  14095819 aggagaaaagagagaactatcataagtgagtgtcatctgaaagtctgagactctcaccgagtgagtgaaatgatttagggttcgagtttctatttatata 14095918  T
Q  141 aaatgggtaataaattgattttctac 166  Q
    |||  |||||||| ||||||||||||    
T  14095919 aaagtggtaataagttgattttctac 14095944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 194
Target Start/End: Complemental strand, 34214878 - 34214726
Alignment:
Q  41 aggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttattta 140  Q
    ||||||||| || |||||||| |||| || |||||| |||||||| |||||||||||| ||| ||||| |||||||||  ||  | ||||||||||| ||    
T  34214878 aggagaaaagagcgaactatgataagtgagtgtcatgtgaaagactgagactctgactgtgttagtgaaatgatttagagttgag-tttctatttatata 34214780  T
Q  141 aaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcg 194  Q
    ||  ||| |||||||||| ||||||||| | |||  |||| | |||||||||||    
T  34214779 aacagggcaataaattgactttctacatctaggacgggtttgagtatgagttcg 34214726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 200
Target Start/End: Complemental strand, 35248618 - 35248448
Alignment:
Q  26 agtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttgg 125  Q
    |||| ||||||||  |||||| || ||||||||||  |||| || |||||| |||||||| ||||||||| || ||||||||| |||||||||| |||      
T  35248618 agtgtgagatatggaaggagataagagagaactataataagcgagtgtcatttgaaagactgagactctgtctgtgtgagtgaaatgatttagggtttca 35248519  T
Q  126 atttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtgg 200  Q
     ||||||||||| ||||| |||| ||| ||   |||||||||||  |||  |||| ||||||| |||||||||||    
T  35248518 ttttctatttatataaaaggggt-atatat---ttttctacattcaggacgggtttgggtatgggttcggggtgg 35248448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 38342622 - 38342537
Alignment:
Q  160 tttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatc 245  Q
    |||||||||| |||   |||| ||||||| ||||||||||| |||||||||| | |||||||||| ||||||| | ||||||||||    
T  38342622 tttctacattcgggtagggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatc 38342537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 40359257 - 40359388
Alignment:
Q  87 gagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggta 186  Q
    |||||||| |||  |||| ||| |||||||||  ||||  ||||||||||| |||||   |||||||||||||||| |||||||| || ||||| | |||    
T  40359257 gagactctaactgcgtgactgaaatgatttagactttgagtttctatttatataaaagatgtaataaattgattttttacatttgagagaggtttgagta 40359356  T
Q  187 tgagttcggggtggatacatatatctctgtta 218  Q
    | |||||| | ||| ||| |||||| ||||||    
T  40359357 ttagttcgagatgggtacctatatccctgtta 40359388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 305
Target Start/End: Complemental strand, 6027968 - 6027849
Alignment:
Q  184 gtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaacc 283  Q
    ||||| ||||||||||| ||| |||||  |||||||||||||| || |||||||||||||||   ||||||| |||| |  | ||||| |  |  |||||    
T  6027968 gtatgggttcggggtgggtacctatatacctgttacccgtctcatacccatgttttaaaatcggggaaaacccaaaccc--aatcaaaacggggaaaacc 6027871  T
Q  284 cgtcaaattgggtttgtttcgg 305  Q
    |||||||||||||||| |||||    
T  6027870 cgtcaaattgggtttggttcgg 6027849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 17845555 - 17845493
Alignment:
Q  100 tgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgatttt 162  Q
    ||||||||| ||||||||||||| |  ||||||||||| ||||| || |||||||||||||||    
T  17845555 tgtgagtgaaatgatttaggtttggagtttctatttatataaaaaggataataaattgatttt 17845493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 37999467 - 37999548
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgtttt 239  Q
    ||||| |||||||||||  |||| ||||||||||||||||||| ||| |||||  | |||||||||||| || || ||||||    
T  37999467 attttttacatttgggacgggtttgggtatgagttcggggtgggtacttatatacccgttacccgtctcatacccgtgtttt 37999548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 43371539 - 43371624
Alignment:
Q  160 tttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatc 245  Q
    |||||||||| |||   |||| ||||||||||| ||||||| |||||||||| | |||||||||| |||| || | ||||||||||    
T  43371539 tttctacattcgggtagggtttgggtatgagtttggggtgggtacatatatccccgttacccgtcccgtacccgtattttaaaatc 43371624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 31601005 - 31600873
Alignment:
Q  26 agtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttgg 125  Q
    |||| ||||||||  |||| | || ||||||||||| |||| ||  ||||| ||||||||  ||||||| ||| | ||||||| |||||||||  ||||     
T  31601005 agtgtgagatatggaaggatagaagagagaactatgataagtgagcgtcatatgaaagactaagactctaactgtatgagtgaaatgatttagagtttga 31600906  T
Q  126 atttctatttatttaaaatgggtaataaattga 158  Q
     ||||||||||| ||||| | ||| ||||||||    
T  31600905 gtttctatttatataaaaggcgtattaaattga 31600873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 30978913 - 30978964
Alignment:
Q  160 tttctacatttgggataggttcgggtatgagttcggggtggatacatatatc 211  Q
    ||||||||||||||   |||| ||||||| ||||||||||||||||||||||    
T  30978913 tttctacatttgggtagggtttgggtatgggttcggggtggatacatatatc 30978964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 6164553 - 6164507
Alignment:
Q  183 ggtatgagttcggggtggatacatatatctctgttacccgtctcgta 229  Q
    |||||||||||||||||| |||||||||| | |||||||||| ||||    
T  6164553 ggtatgagttcggggtgggtacatatatcaccgttacccgtcccgta 6164507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 24414236 - 24414114
Alignment:
Q  159 ttttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaa 258  Q
    |||| |||||||||||  |||| ||||||| ||||||||||| ||| |||||  |||||||||||| | || || |||||| | |||   ||||||| |     
T  24414236 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaaccgat 24414137  T
Q  259 acacatactcaaacccagtcaaa 281  Q
    || ||||| |||||||| |||||    
T  24414136 acccatacccaaacccaatcaaa 24414114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 3547152 - 3547221
Alignment:
Q  160 tttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgta 229  Q
    |||||||||| |||   |||| || |||| ||||||||||| |||||||||||| |||||||||| ||||    
T  3547152 tttctacattcgggtagggtttggatatgggttcggggtgggtacatatatctccgttacccgtcccgta 3547221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 25213956 - 25214020
Alignment:
Q  279 aaacccgtcaaattgggtttgtttcggatgggtacccgtaaatatgag-tttgttgtcatgccta 342  Q
    |||||||||||||||| |||| ||||| |||||||||||  ||||| | ||||||| ||||||||    
T  25213956 aaacccgtcaaattggatttggttcgggtgggtacccgtggatatgggttttgttgccatgccta 25214020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 169
Target Start/End: Complemental strand, 35409361 - 35409248
Alignment:
Q  54 gaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataa 153  Q
    |||||||| |||| || |||||| || ||||| |||||||||||| ||| ||||| ||  |||||  ||||| ||| ||||||  || || |||||| ||    
T  35409361 gaactatgataagtgagtgtcatatgtaagactgagactctgactgtgtaagtgaaatagtttagagtttgggtttttattta--tataacgggtaaaaa 35409264  T
Q  154 attgattttctacatt 169  Q
    ||||||||| ||||||    
T  35409263 attgattttatacatt 35409248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 37106807 - 37106871
Alignment:
Q  279 aaacccgtcaaattgggtttgtttcggatgggtacccgtaaatatgag-tttgttgtcatgccta 342  Q
    ||||||||||||||||||||| |||||  ||||| |||  | |||||| ||||||||||||||||    
T  37106807 aaacccgtcaaattgggtttggttcgggcgggtaaccgcgagtatgagttttgttgtcatgccta 37106871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 37309880 - 37309828
Alignment:
Q  114 tttaggttttggatttctatttatttaaaatgggtaataaattgattttctac 166  Q
    |||||| |||| |||||||||||| ||||| || | |||||||||||||||||    
T  37309880 tttagggtttgaatttctatttatgtaaaagggatgataaattgattttctac 37309828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 42798092 - 42798012
Alignment:
Q  159 ttttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgtttt 239  Q
    |||| ||||||||||| ||||| | ||||| ||||||||||| ||| |||||  | |||||||||||| || || ||||||    
T  42798092 ttttttacatttgggacaggtttgtgtatgggttcggggtgggtacttatatacccgttacccgtctcatacccgtgtttt 42798012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 8e-47; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 6 - 245
Target Start/End: Original strand, 17153000 - 17153239
Alignment:
Q  6 aggagcagagaaaggttgagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgag 105  Q
    ||||| ||||| |||  ||||||| ||||||||  || |||||||||||||||||| |||| |||| |||| |||||||| |||  ||||||| ||||||    
T  17153000 aggagaagagagagggcgagagtgtgagatatggaagaagaaaatagagaactatgataagtgaatctcatttgaaagactgagtatctgactgtgtgag 17153099  T
Q  106 tgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggataca 205  Q
    ||| || ||||||||||||||||||||||||| || || ||||||||||||||||||||||||| ||||  |||| ||||||| ||| ||| ||  ||||    
T  17153100 tgaaattatttaggttttggatttctatttatctagaaggggtaataaattgattttctacattcgggacgggtttgggtatgggtttgggatgagtaca 17153199  T
Q  206 tatatctctgttacccgtctcgtatccatgttttaaaatc 245  Q
    ||||||   |||| ||||| |||| |||||||||||||||    
T  17153200 tatatcatagttatccgtcccgtacccatgttttaaaatc 17153239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 23 - 281
Target Start/End: Complemental strand, 40187897 - 40187640
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| ||||||||  | |||| || ||||||||||| |||| || ||||||||||||||  || ||||||||| ||||||| | |||||||||| ||    
T  40187897 gagagtgtgagatatggaatgagataagagagaactatgataagtgagtgtcatctgaaagattgaaactctgactatgtgagtaaaatgatttaggatt 40187798  T
Q  123 tggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccg 222  Q
    |  ||| |||||||| |||||  ||||||||||| |||||||| ||| ||||   ||| |||||||||||  ||||| |||| |||||||| ||||||||    
T  40187797 ttcattactatttatataaaagaggtaataaattaattttctatattcgggacgagtttgggtatgagtt-tgggtgaatacctatatctccgttacccg 40187699  T
Q  223 tctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    ||||| | || |||||| ||||    ||||||| |||| |||   ||||||||||||||    
T  40187698 tctcgcacccgtgttttgaaattggggaaaacccaaactcatttccaaacccagtcaaa 40187640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 41 - 229
Target Start/End: Complemental strand, 18452108 - 18451920
Alignment:
Q  41 aggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttattta 140  Q
    ||||||||| ||||||| ||| |||| || | |||||||||||||||||||| | ||| ||||||||| ||||| || | || | ||||||||| || ||    
T  18452108 aggagaaaagagagaaccatgataagtgactatcatctgaaagaccgagactttaactgtgtgagtgaaatgatctaagattcgtatttctattaatata 18452009  T
Q  141 aaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgta 229  Q
    ||| || |||||||||||||||||||| | ||||   ||| |  |||||||||||||||| ||| ||||||| ||||||  ||||||||    
T  18452008 aaagggataataaattgattttctacaatcgggacgagtttgattatgagttcggggtgggtacttatatctgtgttacatgtctcgta 18451920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 16311485 - 16311328
Alignment:
Q  71 tgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacattt 170  Q
    ||||| ||||||||| ||||||  ||||||| |||| | |||||||||| ||||| ||||||||||| ||||| || |||||||||||||||| |||||     
T  16311485 tgtcaactgaaagactgagactgagactctgcgagtaaaatgatttagggtttgg-tttctatttatataaaagggataataaattgattttcaacattc 16311387  T
Q  171 gggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgta 229  Q
    | || ||||| |  |||| ||||||||||| ||| |||||| |||||| ||||||||||    
T  16311386 gagacaggtttgaatatgggttcggggtgggtacctatatccctgttatccgtctcgta 16311328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 43 - 221
Target Start/End: Original strand, 29664839 - 29665017
Alignment:
Q  43 gagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaa 142  Q
    ||||||| |||||| |||| |||| || |||||||||||| || |||||||||||  ||| | ||| |||||||||  ||||  ||||||||||  ||||    
T  29664839 gagaaaagagagaattatgataagtgagtgtcatctgaaatactgagactctgacaatgtaaatgaaatgatttagagtttgagtttctatttaaataaa 29664938  T
Q  143 atgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttaccc 221  Q
    | ||||| |||||||||||| |||||| ||||  |||| |||||||||||||  |||| ||| |||||| | |||||||    
T  29664939 aggggtagtaaattgattttgtacattcgggacgggtttgggtatgagttcgaagtgggtacctatatccccgttaccc 29665017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 35583965 - 35584110
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| | ||||||| ||||||||| |||||||  || |||  || || |||||||||||| |||||||||||| ||||||  | |||||||||| ||    
T  35583965 gagagtgtgggatatgaaaggagaaaacagagaacagtgataaatgagtgacatctgaaagactgagactctgactgtgtgagcaaaatgatttagggtt 35584064  T
Q  123 tggatttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
    ||  ||||||||||| ||||| |||||||||||||||||| ||||||    
T  35584065 tgagtttctatttatataaaa-gggtaataaattgattttgtacatt 35584110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 23 - 281
Target Start/End: Original strand, 38972770 - 38973028
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| || |||||| |||||| || ||||||||||| |||| || |||||| |||||||   ||||||| ||  ||||| | | |||||||||| ||    
T  38972770 gagagtgtgatatatgaaaggagataagagagaactatgataagtgagtgtcatatgaaagatttagactctaacagtgtgaatcaaatgatttagggtt 38972869  T
Q  123 tggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccg 222  Q
    |   |||| |||||| ||||| || ||||||||||||||| | |||||| ||| |||| | ||||| ||||||||||| ||| |||||  | ||||||      
T  38972870 tcagtttcgatttatataaaagggttaataaattgattttatgcatttgagatgggtttgagtatgggttcggggtgggtacctatattcccgttaccta 38972969  T
Q  223 tctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    || | || ||||||||| |||||    |||||| |||| |||||  |||||||||||||    
T  38972970 tcccatacccatgttttgaaatcgggaaaaacccaaactcatacctaaacccagtcaaa 38973028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 12457442 - 12457537
Alignment:
Q  100 tgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcgg 195  Q
    ||||||||| |||||||||  ||| | ||||||||||| | ||| ||||||||||||||||||||||||| ||||  |||| ||||||||||||||    
T  12457442 tgtgagtgaaatgatttagactttaggtttctatttatattaaaggggtaataaattgattttctacattcgggacgggtttgggtatgagttcgg 12457537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 211
Target Start/End: Complemental strand, 7350640 - 7350460
Alignment:
Q  31 gagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttc 130  Q
    ||||||||  |||||| || ||||||||||| |||| ||  ||| ||| |||||  | |||||| ||| ||||||| | |||||||||| ||| |||| |    
T  7350640 gagatatggaaggagataagagagaactatgataagtgagcgtcgtctcaaagattgcgactctaactatgtgagtaaaatgatttagggtttcgattac 7350541  T
Q  131 tatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatc 211  Q
    ||||||| |||||  | ||||||||| |||||||||||||| ||  ||||   ||||| ||||||||||||| | ||||||    
T  7350540 tatttatataaaagcgataataaattaattttctacatttgagacgggtttaagtatgggttcggggtggatgcctatatc 7350460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 245
Target Start/End: Original strand, 6810083 - 6810228
Alignment:
Q  100 tgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtg 199  Q
    ||||||||| || ||||| | ||||| |||||||| || ||||| ||| |||||||||||||||  |||| ||||| |||| ||||||| ||||||||||    
T  6810083 tgtgagtgaaatcatttaaggtttgggtttctattgatataaaaggggcaataaattgattttcaccattcgggatgggtttgggtatgggttcggggtg 6810182  T
Q  200 gatacatatatctctgttacccgtctcgtatccatgttttaaaatc 245  Q
      ||| ||||||   |||||||||  |||| || |||| |||||||    
T  6810183 agtacttatatcctcgttacccgttccgtacccgtgttctaaaatc 6810228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 281
Target Start/End: Complemental strand, 12834688 - 12834557
Alignment:
Q  150 ataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatg 249  Q
    ||||||| ||||| |||||||||||  |||  ||||||| ||||||||| | ||| |||||  |||||||||||| | |||||||||||| ||||    |    
T  12834688 ataaattaattttttacatttgggacgggtatgggtatgggttcggggtaggtacctatatacctgttacccgtcccatatccatgttttgaaattggag 12834589  T
Q  250 aaaacctaaacacatactcaaacccagtcaaa 281  Q
    |||||| | || ||||| ||||||||||||||    
T  12834588 aaaacccatacccatacccaaacccagtcaaa 12834557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 26 - 169
Target Start/End: Complemental strand, 457606 - 457467
Alignment:
Q  26 agtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttgg 125  Q
    |||| ||||||||  |||||| || ||||||| ||| |||| || | |||||||||||| | | |||    |||||| ||||| |||||||||| ||| |    
T  457606 agtgtgagatatgtaaggagataagagagaacgatgataagtgagtatcatctgaaagatcaatact----ctctgtaagtgaaatgatttaggattttg 457511  T
Q  126 atttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
     ||||||||||| ||||| | |||||||||||||||| ||||||    
T  457510 gtttctatttatataaaaggtgtaataaattgattttatacatt 457467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 23045072 - 23044974
Alignment:
Q  183 ggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    |||||| ||||||||||| |||||||||||| ||||||| || |||| || | |||| |||||   |||||||||||| ||||| ||||| ||||||||    
T  23045072 ggtatgggttcggggtgggtacatatatctccgttacccatcccgtacccgtattttgaaatcggggaaaacctaaacccatacccaaactcagtcaaa 23044974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 131 - 245
Target Start/End: Complemental strand, 32575071 - 32574957
Alignment:
Q  131 tatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtat 230  Q
    ||||||| ||||| ||||||||||||||| ||||||||| |||   |||| |||| || ||||||| ||| ||||||||||  |||||||| || |||||    
T  32575071 tatttatataaaaggggtaataaattgatattctacattcggggcgggtttgggtttgggttcgggatgggtacatatatccatgttacccatcccgtat 32574972  T
Q  231 ccatgttttaaaatc 245  Q
    |  |||||| |||||    
T  32574971 ctgtgttttgaaatc 32574957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 27900632 - 27900496
Alignment:
Q  31 gagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttc 130  Q
    ||||||||  |||||| || ||||||||||  |||| || ||||||||||||||| ||   ||||| | ||||| ||| |||||||||| |||   ||||    
T  27900632 gagatatgtaaggagataagagagaactatattaagtgagtgtcatctgaaagactgat--tctgaatgtgtgactgaaatgatttagggtttcagtttc 27900535  T
Q  131 tatttatttaaaatgggtaataaattgattttctacatt 169  Q
    ||||||| |||||  || |||||||||||||| ||||||    
T  27900534 tatttatataaaagaggaaataaattgattttatacatt 27900496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 8020511 - 8020609
Alignment:
Q  71 tgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
    |||||| |||||||| |||||||||||| | ||||||  || ||||||| ||| | |||   ||||| ||||| ||||| |||||||||||||||||||    
T  8020511 tgtcatttgaaagactgagactctgactgtttgagtggaataatttagggtttaggttttcctttatataaaaggggtagtaaattgattttctacatt 8020609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 18116593 - 18116547
Alignment:
Q  177 ggttcgggtatgagttcggggtggatacatatatctctgttacccgt 223  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||    
T  18116593 ggtttgggtatgagttcggggtggatacatatatccccgttacccgt 18116547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 43523761 - 43523807
Alignment:
Q  177 ggttcgggtatgagttcggggtggatacatatatctctgttacccgt 223  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||    
T  43523761 ggtttgggtatgagttcggggtggatacatatatccccgttacccgt 43523807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 24207527 - 24207681
Alignment:
Q  12 agagaaaggttgagagtgcgagata-tgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgaca 110  Q
    ||||| |||||||||||| |||||| ||| ||||||||| ||||||||||  ||||  | ||||||||||||||| ||||||||     |||||||||      
T  24207527 agagagaggttgagagtgtgagataatga-aggagaaaagagagaactattataagttagtgtcatctgaaagactgagactct---agtgtgagtgaag 24207622  T
Q  111 tgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
    | ||||||| |||   ||| ||||||| ||||| |  ||||||||| ||||||||||||    
T  24207623 ttatttagggttttagtttttatttatataaaaggattaataaattaattttctacatt 24207681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 4920809 - 4920932
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaaccta 257  Q
    ||||| |||||||||||  |||| ||||||| ||||||||||||||| |||||  | |||||||||| | || || |||||| | |||   ||||||| |    
T  4920809 attttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 4920908  T
Q  258 aacacatactcaaacccagtcaaa 281  Q
     || ||||  ||||||||||||||    
T  4920909 tacccataaccaaacccagtcaaa 4920932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 12866657 - 12866534
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaaccta 257  Q
    ||||| |||||||||||  |||  ||||||| ||||| ||||| ||| |||||  |||||||||||| | || ||||||||| |||||   ||||||  |    
T  12866657 attttttacatttgggacgggtatgggtatgggttcgcggtgggtacctatatacctgttacccgtcccatacccatgttttgaaatcggagaaaactca 12866558  T
Q  258 aacacatactcaaacccagtcaaa 281  Q
     || ||||| ||||||||||||||    
T  12866557 tacccatacccaaacccagtcaaa 12866534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 4583233 - 4583297
Alignment:
Q  279 aaacccgtcaaattgggtttgtttcggatgggtacccgtaaatatgag-tttgttgtcatgccta 342  Q
    ||||||||||||||||||||| |||||  ||||| ||||  ||||||| ||||||| ||||||||    
T  4583233 aaacccgtcaaattgggtttggttcgggcgggtaaccgtggatatgagttttgttgccatgccta 4583297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 5e-39; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 31 - 245
Target Start/End: Original strand, 9402445 - 9402658
Alignment:
Q  31 gagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttc 130  Q
    ||||||||  ||||||||| ||||||||||| |||| || ||| || ||||||||| ||||||||||| ||||||||| |||||||||| ||||| ||||    
T  9402445 gagatatggaaggagaaaagagagaactatgataagtgagtgtgatatgaaagacctagactctgactgtgtgagtgaaatgatttagggtttgggtttc 9402544  T
Q  131 tatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtat 230  Q
    ||||||| ||||  ||||| ||||||||||||||||||| | || ||||| | ||||| |||| ||||||| || ||||||  |||||||||||  |||     
T  9402545 tatttatataaatggggtactaaattgattttctacattcgagacaggtttgagtatgggttc-gggtggacacctatatccatgttacccgtcctgtac 9402643  T
Q  231 ccatgttttaaaatc 245  Q
    ||||||||| |||||    
T  9402644 ccatgttttgaaatc 9402658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 31 - 172
Target Start/End: Complemental strand, 1948023 - 1947882
Alignment:
Q  31 gagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttc 130  Q
    ||||||||| || |||||| || |||||||| |||| || ||||||||||||| | || ||||||||| |||||||   |||| ||||| |||||||||     
T  1948023 gagatatgaaagtagaaaagagggaactatgataagtgagtgtcatctgaaagtcagatactctgactgtgtgagtataatgacttagggtttggatttt 1947924  T
Q  131 tatttatttaaaatgggtaataaattgattttctacatttgg 172  Q
    ||||||| ||||| ||||||||||||||||||||||||||||    
T  1947923 tatttatataaaaggggtaataaattgattttctacatttgg 1947882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 14321717 - 14321861
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| ||||||||| ||||||||| |||||| |||| |||| || |||||||| ||||| ||||||| || | | |||||||| |||||||| | ||    
T  14321717 gagagtgtgagatatgaaaggagaaaa-agagaattatgataagtgattgtcatcttaaagaacgagactttgtcac-gtgagtgaaatgatttaagatt 14321814  T
Q  123 tggatttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
    ||  ||||||||||| |||||| ||||||||||| ||||||||||||    
T  14321815 tgagtttctatttatataaaataggtaataaattaattttctacatt 14321861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 44 - 220
Target Start/End: Complemental strand, 8321014 - 8320838
Alignment:
Q  44 agaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaa 143  Q
    |||||||||| ||||||| |||| ||||||| ||||||||||||||||||||||| ||| ||||| |||||||||| |||   ||||||||||  ||||     
T  8321014 agaaaatagataactatgataagtgaatgtcgtctgaaagaccgagactctgactgtgtaagtgaaatgatttagggtttaagtttctatttacgtaaat 8320915  T
Q  144 tgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacc 220  Q
     | ||||||| |||||||| | ||||  | |  |||  ||||||| ||||||||| ||||  |||||| ||||||||    
T  8320914 ggagtaataagttgattttttgcattcagaacgggtctgggtatgggttcggggtcgatatctatatccctgttacc 8320838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 245
Target Start/End: Original strand, 20348916 - 20349134
Alignment:
Q  26 agtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttgg 125  Q
    |||| ||||||||  ||||||||| ||||||||||| ||||  | ||||||||||||| || |||||||||   |||||||||  ||||||||| ||||     
T  20348916 agtgtgagatatggaaggagaaaagagagaactatgataagtaagtgtcatctgaaagtccaagactctga--gtgtgagtgaagtgatttagggtttga 20349013  T
Q  126 atttcta-tttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtc 224  Q
     ||| || ||||| ||||| | |||||||||| ||||| ||||||||  |  | || ||||||||||||||||||| ||| |||||| | ||||| ||||    
T  20349014 gtttatattttatataaaaagtgtaataaattaattttttacatttgcaacggatttgggtatgagttcggggtgggtacctatatccccgttactcgtc 20349113  T
Q  225 tcgtatccatgttttaaaatc 245  Q
     | || || |||||| |||||    
T  20349114 ccatacccgtgttttgaaatc 20349134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 245
Target Start/End: Original strand, 29341131 - 29341326
Alignment:
Q  55 aactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaa--atgggtaata 152  Q
    ||||||| |||| || ||||||||||||||  |||| ||||||| | | ||||| ||||| |||| ||||| ||||||||||| || |  | |||||| |    
T  29341131 aactatgataagtgattgtcatctgaaagattgagaatctgactgtataagtgaaatgatatagggtttgggtttctatttatatagataaggggtaaaa 29341230  T
Q  153 aat---tgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatc 245  Q
    ||    |||||||||||||| ||||  |||| ||||||||||| ||| ||| ||| |||||||| |||||||||||| |  |||||||| ||||||    
T  29341231 aaaaaatgattttctacattcgggacgggtttgggtatgagtttgggatgggtacctatatctccgttacccgtctcatgcccatgtttgaaaatc 29341326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 34346246 - 34346140
Alignment:
Q  31 gagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttc 130  Q
    ||||||||  || |||||| | ||||||||| |||| || | |||||| |||||| |||||||||||| ||||||||| |||||||||| ||||| ||||    
T  34346246 gagatatggaagaagaaaagatagaactatgataagtgactctcatctaaaagactgagactctgactgtgtgagtgaaatgatttagggtttgggtttc 34346147  T
Q  131 tatttat 137  Q
    |||||||    
T  34346146 tatttat 34346140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 27738755 - 27738878
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaaccta 257  Q
    ||||| |||||||||||  |||| ||||||| ||||||||||| ||||||||| ||||||||||||| | || || |||||| |||||   ||||||| |    
T  27738755 attttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 27738854  T
Q  258 aacacatactcaaacccagtcaaa 281  Q
     || |||||  |||||||||||||    
T  27738855 tacccatacctaaacccagtcaaa 27738878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 139 - 245
Target Start/End: Complemental strand, 256616 - 256510
Alignment:
Q  139 taaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttt 238  Q
    ||||| ||||| |||||||||||||||||||| |||  |||| ||||||| ||| ||||||| ||| |||||  |  |||||||||||||| ||||||||    
T  256616 taaaaggggtagtaaattgattttctacatttaggaggggtttgggtatgggtttggggtgggtacctatatgcccattacccgtctcgtacccatgttt 256517  T
Q  239 taaaatc 245  Q
    | |||||    
T  256516 tgaaatc 256510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 281
Target Start/End: Original strand, 13769024 - 13769178
Alignment:
Q  127 tttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctc 226  Q
    |||| |||||| ||||| | |||||||||||||||||||||||  |||  |||| || |||| |||| |||||| ||| ||||| || |||||||||| |    
T  13769024 tttcaatttatataaaaggagtaataaattgattttctacattcaggacgggtttggatatgggttctgggtgggtacctatatgtccgttacccgtccc 13769123  T
Q  227 gtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
     || ||||||||| || ||   ||||||| |||| |||||  |||||||||||||    
T  13769124 atacccatgttttgaagtcggggaaaaccgaaacccatacctaaacccagtcaaa 13769178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 11762428 - 11762494
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtc 224  Q
    |||||||||||||||||| |||| |||||||||||||||||||| || |||||  | ||||||||||    
T  11762428 attttctacatttgggatgggtttgggtatgagttcggggtggacacctatatacccgttacccgtc 11762494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 18908895 - 18908997
Alignment:
Q  177 ggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccag 276  Q
    |||| ||||||||||| ||||||| ||||||||||  ||||||||||| | ||||| | |||| |||||   ||||||| |||| ||||||||||| |||    
T  18908895 ggtttgggtatgagtttggggtgggtacatatatccttgttacccgtcccatatccgtattttgaaatcggggaaaacccaaactcatactcaaactcag 18908994  T
Q  277 tca 279  Q
    |||    
T  18908995 tca 18908997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 2126860 - 2126715
Alignment:
Q  24 agagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggtttt 123  Q
    |||||| ||||||||  ||||||||| ||||||||||| |||  || ||| |||| ||| ||||||||| | ||||||| ||||| ||||||||    ||    
T  2126860 agagtgtgagatatggaaggagaaaagagagaactatgataactgagtgtgatctaaaataccgagactttaactctgtaagtgaaatgatttaaagctt 2126761  T
Q  124 ggatttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
    |  ||||||| ||| ||||| |||||||||| | ||||||| ||||    
T  2126760 gagtttctatctatataaaaggggtaataaacttattttcttcatt 2126715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 239
Target Start/End: Complemental strand, 10925578 - 10925467
Alignment:
Q  128 ttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcg 227  Q
    |||||||||| ||||| |  |||||||||  |||| |||||| || ||  |||  |||||| ||||||||||||||| ||||||||  |||||| |||||    
T  10925578 ttctatttatataaaaggaataataaattatttttttacattcggaatgagtttaggtatgggttcggggtggatacttatatctccattacccatctcg 10925479  T
Q  228 tatccatgtttt 239  Q
    || |||||||||    
T  10925478 tacccatgtttt 10925467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 28079777 - 28079678
Alignment:
Q  182 gggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    ||||||| ||||||||||| ||| |||||| | |||||||||| |||| ||||||||| |||||   ||||||| |||| ||||| ||||| ||| ||||    
T  28079777 gggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaacccatacccaaactcagccaaa 28079678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 10142623 - 10142571
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatat 210  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||| ||| |||||    
T  10142623 attttttacatttgggacaggtttgggtatgagttcggggtgggtacctatat 10142571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 34179190 - 34179102
Alignment:
Q  82 agaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatg-ggtaataaattgattttctacatt 169  Q
    ||||||||||||||||  || || | | |||||||||| ||||  ||||||||||| ||||| | |||||||||||||||||| |||||    
T  34179190 agaccgagactctgaccgtgcgaataaaatgatttagggtttgagtttctatttatataaaaagaggtaataaattgattttcaacatt 34179102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 245
Target Start/End: Complemental strand, 24602961 - 24602874
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatc 245  Q
    |||||||||||| | ||| |||| ||||||| ||||||||||| ||  |||||  |||||||||||| | || ||||||||| |||||    
T  24602961 attttctacattcgtgatgggtttgggtatgggttcggggtgggtatctatatacctgttacccgtcacatacccatgttttgaaatc 24602874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 29199966 - 29199919
Alignment:
Q  182 gggtatgagttcggggtggatacatatatctctgttacccgtctcgta 229  Q
    ||||||| ||||||||| |||||||||||| |||||||||||| ||||    
T  29199966 gggtatgggttcggggtagatacatatatccctgttacccgtcccgta 29199919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 32053072 - 32053158
Alignment:
Q  159 ttttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatc 245  Q
    |||| ||||||| |||  |||| ||||||| ||| ||||||| |||||||||  | |||||||||| | |||||||||||| |||||    
T  32053072 ttttttacattttggacgggtttgggtatgggtttggggtgggtacatatatacccgttacccgtcccatatccatgttttgaaatc 32053158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 12309555 - 12309620
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgt 223  Q
    ||||| |||||||||||  |||| ||||||  ||||||||||| |||||||||  |||||||||||    
T  12309555 attttttacatttgggacgggtttgggtatcggttcggggtgggtacatatatacctgttacccgt 12309620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 10188178 - 10188126
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatat 210  Q
    ||||| |||||||||||| |||| ||||||| ||||||||||| ||| |||||    
T  10188178 attttttacatttgggatgggtttgggtatgggttcggggtgggtacctatat 10188126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 17546980 - 17546884
Alignment:
Q  185 tatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    |||||||||||||||| ||||| |||| | ||||||  || ||||||| | || | ||||| | |||| || |||| ||||| ||||||||||||||    
T  17546980 tatgagttcggggtgggtacatgtatccccgttaccgatcccgtatccgtattatgaaatcgaggaaaccccaaacccatacccaaacccagtcaaa 17546884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 3e-34; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 8545594 - 8545412
Alignment:
Q  18 aggttgagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgattta 117  Q
    ||||||||| || ||||||||  ||||||||| |||||| |||| |||| || |||||| |||||||||||||||||| || | ||||||| ||||||||    
T  8545594 aggttgagaatgtgagatatggaaggagaaaagagagaattatgataagtgagtgtcatttgaaagaccgagactctggctatttgagtgaaatgattta 8545495  T
Q  118 ggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtgg 200  Q
    || ||||||||||| ||||| ||||| | ||  ||||||||||||||||||||||||   ||| | ||||| |||||||||||    
T  8545494 gggtttggatttctgtttatataaaaggagttgtaaattgattttctacatttgggacgagtttgagtatgggttcggggtgg 8545412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 29918450 - 29918655
Alignment:
Q  18 aggttgagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgattta 117  Q
    |||| |||||||  |||||||  ||| ||||| | ||||||||| |||   | ||||||||||||||  |||||||| ||| ||||||||| ||||||||    
T  29918450 aggtcgagagtgtaagatatggaaggcgaaaagatagaactatgataactaagtgtcatctgaaagattgagactctaactgtgtgagtgaaatgattta 29918549  T
Q  118 ggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgtt 217  Q
    || ||||  ||||||||||| |||||  ||||||||||||||||| |||||||||||  |||| | |||||  |||||||||| ||||||||||| ||||    
T  29918550 gggtttgagtttctatttatataaaagaggtaataaattgattttttacatttgggacgggtttgtgtatggtttcggggtgggtacatatatctttgtt 29918649  T
Q  218 acccgt 223  Q
    ||||||    
T  29918650 acccgt 29918655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 24 - 199
Target Start/End: Original strand, 36274892 - 36275066
Alignment:
Q  24 agagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggtttt 123  Q
    |||||| ||||||||  |||||||||  ||| |||||| |||| || |||||||||||||||||||||| ||||| ||||||||| ||||||||||  ||    
T  36274892 agagtgtgagatatggaaggagaaaagggaggactatgataagtgagtgtcatctgaaagaccgagactttgactgtgtgagtgaaatgatttagg-gtt 36274990  T
Q  124 ggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtg 199  Q
    || ||||||||||| ||||| || || |||||||||||| |||||| |||| | |||  |||||| ||||||||||    
T  36274991 gggtttctatttatataaaagggatagtaaattgattttttacattcgggacatgtttaggtatgggttcggggtg 36275066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 26 - 200
Target Start/End: Original strand, 28345342 - 28345516
Alignment:
Q  26 agtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttgg 125  Q
    |||| ||||||||  |||||| || ||||||||||| |||| || |||||||||||| || |||||| ||||| ||||||||| |||||||||  ||| |    
T  28345342 agtgtgagatatggaaggagataagagagaactatgataagtgagtgtcatctgaaatactgagactatgactgtgtgagtgaaatgatttagaatttcg 28345441  T
Q  126 atttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtgg 200  Q
     ||||||||||| ||||| |||||||| ||| ||||||||||||  ||| | ||| ||||||| |||||||||||    
T  28345442 gtttctatttatataaaaggggtaatatatttattttctacattcaggacaagtttgggtatgggttcggggtgg 28345516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 6 - 245
Target Start/End: Complemental strand, 17084366 - 17084125
Alignment:
Q  6 aggagcagagaaaggttgagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgag 105  Q
    ||||| ||| |||||| ||||||| || |||||  ||||||||| ||| ||||||| |||| || |||||| |||||||| || ||||||| | ||||||    
T  17084366 aggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagataactatgataagtgattgtcatatgaaagactgaaactctgattgtgtgag 17084267  T
Q  106 tgacatgatttaggttttggatttctatttatttaaaatgggtaataaattga--ttttctacatttgggataggttcgggtatgagttcggggtggata 203  Q
     |  || |||||||  |||| ||| ||||||| ||||| ||  ||||||||||  |||| |||||| | ||| |||| || |||||||||||||||| ||    
T  17084266 gggaataatttagggcttgggtttatatttatataaaaaggacaataaattgattttttttacattcgtgatgggtttggatatgagttcggggtgggta 17084167  T
Q  204 catatatctctgttacccgtctcgtatccatgttttaaaatc 245  Q
      |||||| | ||||||||||||||| || ||||||||||||    
T  17084166 tctatatccccgttacccgtctcgtacccgtgttttaaaatc 17084125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 41 - 169
Target Start/End: Complemental strand, 6388727 - 6388599
Alignment:
Q  41 aggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttattta 140  Q
    ||||||||  ||||||||||| |||| || |||||| | |||| | |||||||| | | ||||||||| |||||||||| ||||| ||||| ||||| ||    
T  6388727 aggagaaagaagagaactatgataagtgagtgtcattttaaagtctgagactctaattgtgtgagtgaaatgatttagggtttgggtttctgtttatata 6388628  T
Q  141 aaatgggtaataaattgattttctacatt 169  Q
    |||||||||||||||||||||||||||||    
T  6388627 aaatgggtaataaattgattttctacatt 6388599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 94 - 245
Target Start/End: Original strand, 30903965 - 30904116
Alignment:
Q  94 tgactctgtgagtgacatgattta-ggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagtt 192  Q
    ||||| ||||||||| |||||||| |||||||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||  | || ||||||| ||     
T  30903965 tgactgtgtgagtgaaatgatttaaggttttgg-tttctatttatataaaatgtgtaataaattgattttctacattcgggactgatttgggtatgggta 30904063  T
Q  193 cggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatc 245  Q
     ||||||| ||| ||||||||  |||||||||||||| || |||||| |||||    
T  30904064 tggggtgggtacttatatctccattacccgtctcgtacccgtgttttgaaatc 30904116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 26 - 226
Target Start/End: Original strand, 5700207 - 5700407
Alignment:
Q  26 agtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttgg 125  Q
    |||| ||||||||| |||||| || |||||| |||| |||| || |||||||| ||||||  ||||||||||| || |||||| |||||||||  ||| |    
T  5700207 agtgtgagatatgaaaggagataagagagaattatgataagtgactgtcatctaaaagactaagactctgactatgggagtgaaatgatttagagtttcg 5700306  T
Q  126 atttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtct 225  Q
     |||| |||||| ||||| |||||| ||||| ||||| |||||| ||||| | || ||||||| ||||| ||||| ||  |||||| | |||||| ||||    
T  5700307 gtttcaatttatataaaaggggtaaaaaattaattttatacattcgggatggatttgggtatgggttcgaggtgggtatctatatccccgttaccagtct 5700406  T
Q  226 c 226  Q
    |    
T  5700407 c 5700407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 134 - 279
Target Start/End: Original strand, 14155491 - 14155636
Alignment:
Q  134 ttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatcca 233  Q
    |||| ||||| |||||||||||||||||||||||||| |||| |||| |||||||| || |||||||||| |||||||   ||||||| |||  || ||     
T  14155491 ttatataaaaggggtaataaattgattttctacatttaggatgggtttgggtatgaatttggggtggataaatatatcctcgttacccatcttatacccg 14155590  T
Q  234 tgttttaaaatcaatgaaaacctaaacacatactcaaacccagtca 279  Q
    |||||| |||||    |||||| |||| ||||| ||||||||||||    
T  14155591 tgttttgaaatcgggaaaaacccaaactcatacccaaacccagtca 14155636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 9476188 - 9476031
Alignment:
Q  88 agactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtat 187  Q
    ||||||||||| ||||||||| || ||||||  |||  |||||||||||| || || ||||||||| || |||||||||||| ||||| |||| ||||||    
T  9476188 agactctgactgtgtgagtgaaataatttagagtttcaatttctatttatatataaggggtaataatttaattttctacattcgggatgggtttgggtat 9476089  T
Q  188 gagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatc 245  Q
    | ||||| ||||| ||  |||||| | |||||  ||| ||||||| | |||| |||||    
T  9476088 gggttcgaggtgggtatttatatccccgttacttgtcccgtatccgttttttgaaatc 9476031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 281
Target Start/End: Complemental strand, 27777421 - 27777180
Alignment:
Q  41 aggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttattta 140  Q
    ||||||||  || |||||||| |||| || |||||||||||| || || |||| |||| | | ||| | |||||||||  ||| |||||||||||||  |    
T  27777421 aggagaaaggagtgaactatgataagtgagtgtcatctgaaatactgaaactcagactgtttaagtaaaatgatttagagtttagatttctatttataca 27777322  T
Q  141 aaatggg-taataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgtttt 239  Q
    ||| ||| ||||||||||||||| || || | |     ||| ||||||| ||||||||||| ||| | ||||||||||||| ||| |||| |  ||||||    
T  27777321 aaaaggggtaataaattgattttatatatgtagagcgagtttgggtatgggttcggggtgggtacctgtatctctgttacctgtcccgtacctgtgtttt 27777222  T
Q  240 aaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
     |||||    |||||  |||||||||| ||||||||||||||    
T  27777221 gaaatcgggaaaaactcaaacacatacccaaacccagtcaaa 27777180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 12468399 - 12468312
Alignment:
Q  82 agaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
    ||||||||||||||||  | ||||||| || ||||||| ||||  ||||| ||||| ||||| ||||||||| |||||||||||||||    
T  12468399 agaccgagactctgacagtatgagtgaaataatttaggatttgcgtttctctttatataaaaagggtaataagttgattttctacatt 12468312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 15173985 - 15173862
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaaccta 257  Q
    |||||||||||| |||   |||| | ||||||||||| ||||||||||||||||||  ||||||||| |||| || | |||| |||||    |||||  |    
T  15173985 attttctacattcgggtacggtttgagtatgagttcgaggtggatacatatatctcatttacccgtcccgtacccgtattttgaaatcgggaaaaactca 15173886  T
Q  258 aacacatactcaaacccagtcaaa 281  Q
    ||||||||| ||||||||||||||    
T  15173885 aacacatacccaaacccagtcaaa 15173862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 29108927 - 29108804
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaaccta 257  Q
    ||||| |||||||||||  |||  ||||||| ||||||||||| |||||||||  | |||||||||| | || |||||||||||||||    |||||| |    
T  29108927 attttttacatttgggacgggtatgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgttttaaaatcgggaaaaaccca 29108828  T
Q  258 aacacatactcaaacccagtcaaa 281  Q
     || ||||| ||||||||||||||    
T  29108827 tacccatacccaaacccagtcaaa 29108804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 17108301 - 17108400
Alignment:
Q  100 tgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtg 199  Q
    ||||||||| || ||||||| |||   ||||||||||| |||||||| ||||||||||||||| |||| | |||||  ||| |||||| |||||| ||||    
T  17108301 tgtgagtgaaattatttagggtttaagtttctatttatataaaatggataataaattgattttttacaatcgggatgagtttgggtataagttcgaggtg 17108400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 24927933 - 24928055
Alignment:
Q  159 ttttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaa 258  Q
    |||| |||||||||||  |||| ||||||| ||||||||||| ||| |||||  | |||||||||||| || || |||||  | ||||  ||||||| |     
T  24927933 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagatcagggaaaacccat 24928032  T
Q  259 acacatactcaaacccagtcaaa 281  Q
    || ||||| ||||||||||||||    
T  24928033 acccatacccaaacccagtcaaa 24928055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 281
Target Start/End: Complemental strand, 15068690 - 15068570
Alignment:
Q  160 tttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaa 259  Q
    |||||||||| |||   |||||||||||| |||||||||||||||||||||| | |||||| ||| |||| || | |||| |||||   |||||||  ||    
T  15068690 tttctacattcgggtagggttcgggtatgggttcggggtggatacatatatc-ccgttacctgtcccgtacccgtattttgaaatcggggaaaacccgaa 15068592  T
Q  260 cacatactcaaacccagtcaaa 281  Q
    | ||||| || |||||||||||    
T  15068591 cccatacccagacccagtcaaa 15068570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 29089889 - 29089953
Alignment:
Q  279 aaacccgtcaaattgggtttgtttcggatgggtacccgtaaatatgag-tttgttgtcatgccta 342  Q
    ||||||||||||||||||||| ||||| |||||| || |||||||| | ||||||| ||||||||    
T  29089889 aaacccgtcaaattgggtttgattcgggtgggtaaccataaatatgggctttgttgccatgccta 29089953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 281
Target Start/End: Complemental strand, 37961060 - 37960944
Alignment:
Q  165 acatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacat 264  Q
    ||||||||||  |||| ||||||||||||||||||  ||| |||||  |||||||| ||| | || || |||||| |||||   ||||||| |||| |||    
T  37961060 acatttgggacgggtttgggtatgagttcggggtgtgtacctatatacctgttacctgtcccatacccgtgtttttaaatcggggaaaacccaaactcat 37960961  T
Q  265 actcaaacccagtcaaa 281  Q
    || |||||| |||||||    
T  37960960 acccaaacctagtcaaa 37960944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 5793510 - 5793580
Alignment:
Q  100 tgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacattt 170  Q
    ||||||||| |||||||||| ||||  ||||||||||| |||||  | |||| |||||||||| |||||||    
T  5793510 tgtgagtgaaatgatttagggtttgagtttctatttatataaaaatgataattaattgattttttacattt 5793580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 196
Target Start/End: Complemental strand, 39379763 - 39379646
Alignment:
Q  78 tgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggatag 177  Q
    ||||||||||||||   || | ||| ||||| |||||||| | |||||||||||||||||  | || || |||||||||||||| ||||||| ||||       
T  39379763 tgaaagaccgagacatcgattgtgtaagtgaaatgatttaagatttggatttctatttatacagaa-ggataataaattgatttactacattcgggacga 39379665  T
Q  178 gttcgggtatgagttcggg 196  Q
    ||| | |||||||||||||    
T  39379664 gtttgagtatgagttcggg 39379646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 2183685 - 2183588
Alignment:
Q  184 gtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    ||||||||||||||||| ||||||||||||  |||||  ||||||| || | |||| |||||   ||||| | |||| |||||  |||||||||||||    
T  2183685 gtatgagttcggggtgggtacatatatctccattacctctctcgtacccgtattttgaaatcggagaaaatccaaactcatacctaaacccagtcaaa 2183588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 41 - 239
Target Start/End: Complemental strand, 33516296 - 33516097
Alignment:
Q  41 aggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactc-tgtgagtgacatgatttaggttttggatttctatttattt 139  Q
    ||||||||| |||||| |||| |||| || |||||||||||||||| ||||||| ||   ||||||||| |||||||||| ||||  ||| ||||||| |    
T  33516296 aggagaaaagagagaattatgataagtgagtgtcatctgaaagaccaagactctaacgggtgtgagtgaaatgatttagggtttgagtttttatttatat 33516197  T
Q  140 aaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgtttt 239  Q
    |||| |||||||| ||||||||| |||||||| ||  |||| ||||||  ||||||||||| ||| |||||| ||||||||| ||||||| || ||||||    
T  33516196 aaaaggggtaatacattgattttttacatttgagacgggtttgggtataggttcggggtgggtacttatatccctgttacccatctcgtacccgtgtttt 33516097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 33616367 - 33616210
Alignment:
Q  12 agagaaaggttgagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacat 111  Q
    |||||||||  ||||||| ||||||||   |||||||| ||||||||||| |||| || |||||| ||||| |   ||||||||||| ||||||||| ||    
T  33616367 agagaaaggccgagagtgtgagatatggatggagaaaagagagaactatgataagtgagtgtcatatgaaatattaagactctgactgtgtgagtgaaat 33616268  T
Q  112 gatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
    |||||||| ||| ||||| ||||||| ||||| |||||||||||||||||||||||||    
T  33616267 gatttagggttttgatttttatttatataaaaggggtaataaattgattttctacatt 33616210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 7 - 245
Target Start/End: Complemental strand, 21714232 - 21713994
Alignment:
Q  7 ggagcagagaaaggttgagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagt 106  Q
    |||| |||||||||| |||| || |||||| || | ||||||| |||||||||||  ||| || |||||| ||| |||| |||||||| | | ||| |||    
T  21714232 ggagaagagaaaggtcgagaatgtgagatacgaaaagagaaaagagagaactatgagaagtgagtgtcatttgagagactgagactctaattgtgtaagt 21714133  T
Q  107 gacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacat 206  Q
    || |||||||||| ||||  ||||||||||| |||||  ||||||||||| |||||||||||||| ||   |||  ||||||||||  |||||| |||||    
T  21714132 gaaatgatttagggtttgagtttctatttatataaaagaggtaataaattaattttctacatttgagacgagtttaggtatgagtttagggtgggtacat 21714033  T
Q  207 atatctctgttacccgtctcgtatccatgttttaaaatc 245  Q
    ||| |||  |||||| || ||||  ||||||||||||||    
T  21714032 atacctcgattacccatcacgtactcatgttttaaaatc 21713994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 42907742 - 42907956
Alignment:
Q  24 agagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggtttt 123  Q
    |||||| ||||||||  ||||||||| | ||||||||| |||| |  |||||||||||||||  ||||||| ||| | ||||||| |||||||||| |||    
T  42907742 agagtgtgagatatggaaggagaaaagatagaactatgataagtgtgtgtcatctgaaagactaagactctaactgtatgagtgaaatgatttagggttt 42907841  T
Q  124 ggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgt 223  Q
    |  ||||||||||| ||||| | ||| ||||||||||||||||||| ||||   ||| ||||||| | ||||||||| ||| |||||| |  |||| |||    
T  42907842 gagtttctatttatataaaa-gagtagtaaattgattttctacattcgggacgagtttgggtatgggctcggggtgggtacctatatccccattactcgt 42907940  T
Q  224 ctcgtatccatgtttt 239  Q
    | ||||||| ||||||    
T  42907941 cccgtatccgtgtttt 42907956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 196
Target Start/End: Complemental strand, 8844027 - 8843872
Alignment:
Q  41 aggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttattta 140  Q
    ||||||||| ||||||||||| |||| || ||||||||||||| |  ||||| ||||| ||||||||| |||||||||| |||   ||||||||||| |     
T  8844027 aggagaaaagagagaactatgataagtgagtgtcatctgaaagtctaagactgtgactgtgtgagtgaaatgatttaggatttaagtttctatttatatg 8843928  T
Q  141 aaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggg 196  Q
    ||| |||||||||||| ||||||||||||   ||  |||| |||||||||||||||    
T  8843927 aaaggggtaataaattaattttctacattcacgacgggtttgggtatgagttcggg 8843872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 196
Target Start/End: Complemental strand, 8856991 - 8856836
Alignment:
Q  41 aggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttattta 140  Q
    ||||||||| ||||||||||| |||| || ||||||||||||| |  ||||| ||||| ||||||||| |||||||||| |||   ||||||||||| |     
T  8856991 aggagaaaagagagaactatgataagtgagtgtcatctgaaagtctaagactgtgactgtgtgagtgaaatgatttaggatttaagtttctatttatatg 8856892  T
Q  141 aaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggg 196  Q
    ||| |||||||||||| ||||||||||||   ||  |||| |||||||||||||||    
T  8856891 aaaggggtaataaattaattttctacattcacgacgggtttgggtatgagttcggg 8856836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 169
Target Start/End: Complemental strand, 17113244 - 17113098
Alignment:
Q  22 tgagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggtt 121  Q
    |||||||| ||||||||  |||| |||| ||| ||||||| |||| || ||||||||||||||| |||||||||||| || |||||| |||||||| | |    
T  17113244 tgagagtgtgagatatggaaggaaaaaagagataactatgataagtgagtgtcatctgaaagactgagactctgactttgggagtgaaatgatttaagat 17113145  T
Q  122 ttggatttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
    |||| ||| ||||||| | ||| | |||||||||||||||||||||||    
T  17113144 ttgggtttttatttatatgaaa-gagtaataaattgattttctacatt 17113098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 41 - 245
Target Start/End: Original strand, 25941012 - 25941214
Alignment:
Q  41 aggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttattta 140  Q
    |||||||||||||  |||||| |||| ||||||||||||||||||  ||||| |||   |||||||||  |||||||||  |||| ||||||||||| ||    
T  25941012 aggagaaaataga--actatgataagtgaatgtcatctgaaagactaagactatgatcgtgtgagtgaattgatttaggccttgggtttctatttatata 25941109  T
Q  141 aaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgtttta 240  Q
    ||| |||| |||||||||||||||||||  | || | ||| ||||||| ||||||||||| ||| ||| |  | |||||| ||| |||| || ||||||     
T  25941110 aaaggggttataaattgattttctacatccgagacatgtttgggtatgggttcggggtgggtacctatcttcccgttacctgtcccgtacccgtgttttg 25941209  T
Q  241 aaatc 245  Q
    |||||    
T  25941210 aaatc 25941214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 23 - 210
Target Start/End: Complemental strand, 9281130 - 9280943
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| ||||||||  ||||||||| |||| |||||| |||| |||||| ||||||||||  |||||||| | | ||| | ||  |||||||||| ||    
T  9281130 gagagtgtgagatatggaaggagaaaagagagtactatgataagtgaatgttatctgaaagattgagactctaattttgtcaatgtaatgatttagggtt 9281031  T
Q  123 tggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatat 210  Q
    || |||||||| ||| ||||| || ||||||||| |||||||| |||  ||| | ||| | ||||||||||||||||| ||| |||||    
T  9281030 tgaatttctatctatataaaagggataataaatttattttctatattcaggacaagtttgagtatgagttcggggtgggtacctatat 9280943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 244
Target Start/End: Complemental strand, 12075872 - 12075651
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttag-gtt 121  Q
    ||||||| |||||||   ||||||||| ||||||||||  |||| | ||||||||| ||| || || ||||| ||| |||| |||| |||||| || |||    
T  12075872 gagagtgtgagatatagaaggagaaaagagagaactataataagtggatgtcatctaaaaaactgaaactctaactgtgtgggtgaaatgattcagagtt 12075773  T
Q  122 ttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttaccc 221  Q
    || | ||||||||||| |||||||||||||||||||||||||||||||  |||   ||| | ||| ||||| ||||||| ||||||| || || |||||     
T  12075772 ttag-tttctatttatataaaatgggtaataaattgattttctacattccggacgagtttgagtacgagtttggggtgggtacatatctccctattacct 12075674  T
Q  222 gtctcgtatccatgttttaaaat 244  Q
    ||| |||| || |||||| ||||    
T  12075673 gtcacgtacccgtgttttgaaat 12075651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 118 - 254
Target Start/End: Complemental strand, 40420730 - 40420595
Alignment:
Q  118 ggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgtt 217  Q
    |||||||| ||||||||||| ||||| |||||||||| |||||||||||||| ||| | |||| ||||||  |||||| |||| ||  ||||||| ||||    
T  40420730 ggttttgg-tttctatttatataaaaggggtaataaagtgattttctacattcggggtgggtttgggtataggttcggagtggctaggtatatctttgtt 40420632  T
Q  218 acccgtctcgtatccatgttttaaaatcaatgaaaac 254  Q
    || |||||| ||||||| |||| ||||||| ||||||    
T  40420631 actcgtctcatatccatattttgaaatcaaggaaaac 40420595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 169
Target Start/End: Complemental strand, 21957051 - 21956909
Alignment:
Q  26 agtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttgg 125  Q
    |||| ||||||||  ||||||||| | | ||||||| |||  || |||||||| |||||| || ||||||||| || || ||| |||||||||| |||||    
T  21957051 agtgtgagatatggaaggagaaaagatataactatgataaatgagtgtcatctaaaagactgacactctgactgtgcgaatgaaatgatttagggtttgg 21956952  T
Q  126 atttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
     ||| ||||||| ||||| |||||||||||||||||||||||||    
T  21956951 gtttttatttatataaaa-gggtaataaattgattttctacatt 21956909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 169
Target Start/End: Complemental strand, 25265384 - 25265242
Alignment:
Q  26 agtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttgg 125  Q
    |||| ||||||||  ||||||||| ||||||||||| |||| || |||||||||||| |  |||||||||| | ||||||| | |||||||||  ||||     
T  25265384 agtgtgagatatggaaggagaaaagagagaactatgataagcgactgtcatctgaaaaattgagactctgattgtgtgagtaaaatgatttagaatttga 25265285  T
Q  126 atttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
     ||||||||||| || || || ||||||||||||||||||||||    
T  25265284 gtttctatttatatagaa-ggataataaattgattttctacatt 25265242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 265
Target Start/End: Complemental strand, 35304757 - 35304515
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| ||||||||  ||||||||| ||||||||  | |||| ||   ||| ||||||||| ||||||| | ||||||| |||| |||||||||  ||    
T  35304757 gagagtgtgagatatggaaggagaaaaaagagaactgcgataagtgatcatcacctgaaagactgagactccggctctgtgggtgaaatgatttagagtt 35304658  T
Q  123 tggatttctatttatttaaaatgggtaataaattgattttctacatt-tgggataggttcgggtatgagttcggggtggatacatatatctctgttaccc 221  Q
    ||  ||||| ||||| ||||| ||||||||||||||||| ||||||| |  |||  ||| ||||||||||| ||||| | ||| |||||| | |||||||    
T  35304657 tgagtttctttttatataaaa-gggtaataaattgatttcctacattctttgatgagtttgggtatgagtttggggtaggtacctatatccccgttaccc 35304559  T
Q  222 gtctcgtatccatgttttaaaatcaatgaaaacctaaacacata 265  Q
    ||| ||||   |||||||||||| |  ||||||| |||| ||||    
T  35304558 gtcccgtacttatgttttaaaattagagaaaacccaaacccata 35304515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 36306687 - 36306790
Alignment:
Q  71 tgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacattt 170  Q
    |||||||| |||||| |||||||| | | ||| ||||| |||||||| | ||| ||||||||||||| ||||| |||||||||||||||||||||||||     
T  36306687 tgtcatctcaaagactgagactctaattgtgtaagtgaaatgatttatgatttcgatttctatttatataaaaggggtaataaattgattttctacattc 36306786  T
Q  171 ggga 174  Q
    ||||    
T  36306787 ggga 36306790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 36918996 - 36919122
Alignment:
Q  41 aggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttattta 140  Q
    ||||||||| |||||| ||||  ||| | |||||||||||||| | |||||||| ||| ||||||||| |||||||||  ||||  ||||||||||| ||    
T  36918996 aggagaaaaaagagaaatatgacaagtggatgtcatctgaaagtctgagactct-actgtgtgagtgaaatgatttagagtttgagtttctatttatata 36919094  T
Q  141 aaatgggtaataaattgattttctacat 168  Q
    |||  ||||||||| |||||||||||||    
T  36919095 aaagtggtaataaactgattttctacat 36919122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 112 - 282
Target Start/End: Complemental strand, 4741367 - 4741198
Alignment:
Q  112 gatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatc 211  Q
    |||||||| ||||  ||||||||||| |||||||| ||||||||||||||  |||||| || |  ||||   ||||| ||||||||||| ||| ||||||    
T  4741367 gatttagggtttgagtttctatttatataaaatggataataaattgattta-tacattcggaacgggtttttgtatgggttcggggtgggtacttatatc 4741269  T
Q  212 tctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaac 282  Q
     |||||| ||||| | || ||||||||||||||| | ||||||  |||| ||||  ||||| |||||||||    
T  4741268 cctgttatccgtcccatacccatgttttaaaatcgaggaaaactcaaactcatatccaaactcagtcaaac 4741198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 151 - 281
Target Start/End: Complemental strand, 19883169 - 19883039
Alignment:
Q  151 taaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatga 250  Q
    |||||||||||| |||||| ||||   ||| | ||||  ||||||||||||||| |||||| | ||||||| || ||||||| ||||||||||||   ||    
T  19883169 taaattgattttatacattcgggacgagtttgtgtatcggttcggggtggatacctatatccccgttacccttcccgtatccgtgttttaaaatcgggga 19883070  T
Q  251 aaacctaaacacatactcaaacccagtcaaa 281  Q
    ||||| |||| |||||||||||||| |||||    
T  19883069 aaacccaaactcatactcaaacccaatcaaa 19883039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 37926410 - 37926636
Alignment:
Q  18 aggttgagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgattta 117  Q
    |||| ||||||| ||||||||  ||||||||||||||||||||| |||| || |||||||  |||||| |||||| | ||| ||||||| | ||||||||    
T  37926410 aggtcgagagtgtgagatatggaaggagaaaatagagaactatgataagtgactgtcatc--aaagactgagactttaactgtgtgagttaaatgattta 37926507  T
Q  118 ggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgtt 217  Q
       ||||  |||| ||| || | ||| || ||||||||| |||| |||||||  ||||  ||| ||||||| |||| |   || ||| |||||| |||||    
T  37926508 aagtttgagtttcaattgatatgaaagggataataaattaatttactacattcaggatgagtttgggtatgggttcagaccgggtacttatatccctgtt 37926607  T
Q  218 acccgtctcgtatccatgttttaaaatca 246  Q
    ||  |||| ||| ||||||||||||||||    
T  37926608 acttgtctggtacccatgttttaaaatca 37926636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 223
Target Start/End: Complemental strand, 9929380 - 9929208
Alignment:
Q  51 agagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaa 150  Q
    ||||||||||| |||| || ||| |||| ||||||||||||||||||| ||||||||| || ||||||  |||   ||| ||||||| |  ||  |||||    
T  9929380 agagaactatgataagtgattgttatctaaaagaccgagactctgactgtgtgagtgaaattatttagagtttcagtttatatttatatggaagaggtaa 9929281  T
Q  151 taaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgt 223  Q
    |||||||||||||||| ||  |||    || ||||| ||||||||||||| ||| ||||||  ||||||||||    
T  9929280 taaattgattttctactttcaggacgattttgggtaagagttcggggtgggtacctatatccatgttacccgt 9929208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 14606007 - 14605908
Alignment:
Q  182 gggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||||||| || | |||| |||||   ||||||| |||| ||||| ||||| ||||||||    
T  14606007 gggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagtcaaa 14605908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 171
Target Start/End: Original strand, 39086040 - 39086157
Alignment:
Q  53 agaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaata 152  Q
    ||||||||| ||||  | |||||||||||| || |||| ||||||| ||||||||| |||||||||| |||   ||||||||||| |||||  |||| ||    
T  39086040 agaactatgataagtaagtgtcatctgaaaaactgagagtctgactgtgtgagtgaaatgatttagggtttaagtttctatttatataaaa-aggtagta 39086138  T
Q  153 aattgattttctacatttg 171  Q
    |||||||||||||| ||||    
T  39086139 aattgattttctacttttg 39086157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 45065240 - 45065361
Alignment:
Q  160 tttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaa 259  Q
    |||||||||| |||   |||| ||||||| ||||||| ||| |||||||||| ||||||| |||| |||| || | |||| ||||| | |||||||||||    
T  45065240 tttctacattcgggtagggtttgggtatgcgttcgggatgggtacatatatccctgttactcgtcccgtacccgtattttgaaatcgaggaaaacctaaa 45065339  T
Q  260 cacatactcaaacccagtcaaa 281  Q
    |  |||| ||||||||||||||    
T  45065340 cctatacccaaacccagtcaaa 45065361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 174
Target Start/End: Complemental strand, 7334416 - 7334275
Alignment:
Q  31 gagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttc 130  Q
    ||||||||  ||||||||| |||||| |||| |||   ||||||| || |||||| |||||| | ||| ||||||||| |||||||||  ||||  ||||    
T  7334416 gagatatggaaggagaaaagagagaattatgataaataaatgtcaactaaaagactgagactttaactgtgtgagtgaaatgatttagagtttgagtttc 7334317  T
Q  131 tatttatttaaaatgggtaataaattgattttctacatttggga 174  Q
    ||||||  |||||  | |||||||||||||||| ||||||||||    
T  7334316 tattta--taaaaacgataataaattgattttcaacatttggga 7334275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 30034531 - 30034667
Alignment:
Q  26 agtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttgg 125  Q
    |||| ||||||||  ||||||||| ||| ||||||| |||| || |||||  |||||||  | |||||| ||| | ||||||| |||||||||| |||||    
T  30034531 agtgtgagatatggaaggagaaaagagaaaactatgataagcgagtgtcacttgaaagattgtgactctcactttatgagtgaaatgatttagggtttgg 30034630  T
Q  126 atttctatttatttaaaatgggtaataaattgatttt 162  Q
     ||||||||||| ||||   |||| ||||||||||||    
T  30034631 gtttctatttatataaatgaggtagtaaattgatttt 30034667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 211
Target Start/End: Original strand, 37384204 - 37384314
Alignment:
Q  100 tgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtg 199  Q
    ||||||||| |||||||||| |||| | |||||||||| ||||| || ||||||||||| |||||| ||||||||  |||| | ||||| ||| ||||||    
T  37384204 tgtgagtgaaatgatttagggtttgaacttctatttatataaaagggataataaattga-tttctatatttgggacgggtttgtgtatgggtttggggtg 37384302  T
Q  200 gatacatatatc 211  Q
    |||  |||||||    
T  37384303 gatgaatatatc 37384314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 407 - 497
Target Start/End: Complemental strand, 26166603 - 26166513
Alignment:
Q  407 aaatattattactatatgcactccacatcttcagtaagcgacttcctcaacccgtgattcttctgactttttcaagctctcacgatacgat 497  Q
    ||||||||||  |||||||||||| || |||||||||||||||||||||||  ||| | ||||| || ||||| | |||||||||| ||||    
T  26166603 aaatattattcatatatgcactccgcaccttcagtaagcgacttcctcaacgtgtggtacttctaaccttttccatctctcacgatgcgat 26166513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 281
Target Start/End: Original strand, 10302041 - 10302196
Alignment:
Q  127 tttctatttatttaaaatg-ggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtct 225  Q
    ||||||||||| ||||| | ||||| ||| | ||||| |||||||||||  | |  ||||||| ||||||||||| |||||||| | | |||||||||||    
T  10302041 tttctatttatataaaaggtggtaaaaaagtaattttttacatttgggacggatatgggtatgggttcggggtgggtacatataaccccgttacccgtct 10302140  T
Q  226 cgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    | || || |  ||| |||||   |||||||||||| ||||| |||||||| |||||    
T  10302141 catacccgtactttgaaatcggggaaaacctaaacccatacccaaacccaatcaaa 10302196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 25298994 - 25298896
Alignment:
Q  102 tgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtgga 201  Q
    ||||||| |||||||||  |||| | ||||||||||  |||| |||| |||||||||||||| |||||||| |  |||| ||||||| ||||||||||||    
T  25298994 tgagtgaaatgatttagagtttg-agttctatttataaaaaaggggtgataaattgattttcaacatttggtacgggtttgggtatgggttcggggtgga 25298896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 11028063 - 11028185
Alignment:
Q  159 ttttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaa 258  Q
    |||| ||||||||||| ||||| ||||||||||||||||||| ||| |||||  | |||||||||| | || || |||||| | |||   ||||||| |     
T  11028063 ttttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccat 11028162  T
Q  259 acacatactcaaacccagtcaaa 281  Q
    || ||||| |||| |||||||||    
T  11028163 acccatacccaaatccagtcaaa 11028185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 15733602 - 15733536
Alignment:
Q  188 gagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaac 254  Q
    ||||||||||||| |||||||||||| ||||||||||||||| || | |||| ||||| | ||||||    
T  15733602 gagttcggggtgggtacatatatctccgttacccgtctcgtacccgtattttgaaatcgaggaaaac 15733536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 50684475 - 50684580
Alignment:
Q  177 ggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccag 276  Q
    |||| |||||||||||| || ||| ||  |||||||| |||||||||| ||||||| | ||||||||||   | ||||| || | ||||||||||||||     
T  50684475 ggtttgggtatgagttccggatgggtatctatatctccgttacccgtcccgtatccgtattttaaaatcggggtaaacccaagctcatactcaaacccac 50684574  T
Q  277 tcaaac 282  Q
    ||||||    
T  50684575 tcaaac 50684580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 36919243 - 36919307
Alignment:
Q  279 aaacccgtcaaattgggtttgtttcggatgggtacccgtaaatatgag-tttgttgtcatgccta 342  Q
    ||||||||||||||| ||||| |||||||| |||||||  | |||||| ||||||||||||||||    
T  36919243 aaacccgtcaaattgagtttggttcggatgcgtacccgcgagtatgagttttgttgtcatgccta 36919307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 272
Target Start/End: Original strand, 37246836 - 37246948
Alignment:
Q  160 tttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaa 259  Q
    ||||||||||   |||||||| | ||||||||||| | ||  ||||||||||| |||||   |||||||| || |||||||||||| | ||||| | |||    
T  37246836 tttctacattcatgataggtttgtgtatgagttcgagatgagtacatatatctttgttattagtctcgtacccgtgttttaaaatcgaggaaaatccaaa 37246935  T
Q  260 cacatactcaaac 272  Q
    ||||||| |||||    
T  37246936 cacatacccaaac 37246948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 42299908 - 42299972
Alignment:
Q  279 aaacccgtcaaattgggtttgtttcggatgggtacccgtaaatatg-agtttgttgtcatgccta 342  Q
    ||||||||||||||| ||||| |||||||||||| ||| | ||||| | ||||||||||||||||    
T  42299908 aaacccgtcaaattgagtttggttcggatgggtaaccgcatatatgaattttgttgtcatgccta 42299972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 202
Target Start/End: Original strand, 43553354 - 43553479
Alignment:
Q  82 agaccgagactctgactctgtgagtgacatgatttaggttttg-gatttctatt----tatttaaaatgggtaataaattgattttctacatttgggata 176  Q
    |||| |||||| ||||  ||||||||| ||||||||||||| | | ||||||||    ||| ||||| ||||||||||||||||||| ||||| ||||      
T  43553354 agactgagactttgaccgtgtgagtgaaatgatttaggtttagagttttctatttatctatataaaaggggtaataaattgattttcaacattcgggacg 43553453  T
Q  177 ggttcgggtatgagttcggggtggat 202  Q
     |||  | ||||||||||||||||||    
T  43553454 agtttcgatatgagttcggggtggat 43553479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 30266417 - 30266370
Alignment:
Q  177 ggttcgggtatgagttcggggtggatacatatatctctgttacccgtc 224  Q
    |||| ||||||| |||||||||||||||||||||| | ||||||||||    
T  30266417 ggtttgggtatgggttcggggtggatacatatatccccgttacccgtc 30266370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 30285771 - 30285818
Alignment:
Q  177 ggttcgggtatgagttcggggtggatacatatatctctgttacccgtc 224  Q
    |||| ||||||| |||||||||||||||||||||| | ||||||||||    
T  30285771 ggtttgggtatgggttcggggtggatacatatatccccgttacccgtc 30285818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 245
Target Start/End: Original strand, 48459470 - 48459557
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatc 245  Q
    ||||| |||||||||||| |||  ||||||| ||||||||||| ||| |||||  |||||||||||  | || ||||||||| |||||    
T  48459470 attttttacatttgggatgggtatgggtatgggttcggggtgggtacctatatacctgttacccgttccatacccatgttttgaaatc 48459557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 53906856 - 53906747
Alignment:
Q  87 gagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggta 186  Q
    |||||| ||||| ||||||||| || | ||| | ||| ||||||||||||| ||||| ||||||| | |||| |||||||||||||||  ||||  ||||    
T  53906856 gagactttgactatgtgagtgaaataacttaaggtttcgatttctatttatataaaaggggtaat-atttga-tttctacatttgggacgggtttaggta 53906759  T
Q  187 tgagttcggggt 198  Q
    |||||| |||||    
T  53906758 tgagtttggggt 53906747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 245
Target Start/End: Original strand, 6268489 - 6268591
Alignment:
Q  143 atgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaa 242  Q
    |||| ||||||| | ||||||||||||   |||  ||| ||||||||||||||||||  |||||||||   |||||| | |||| || ||||||||||||    
T  6268489 atggataataaaataattttctacattctagatgtgtttgggtatgagttcggggtgagtacatatattattgttacacatctcatacccatgttttaaa 6268588  T
Q  243 atc 245  Q
    |||    
T  6268589 atc 6268591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 6382377 - 6382255
Alignment:
Q  159 ttttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaa 258  Q
    |||| |||||||||||  |||| ||||||| ||||||||||| ||| |||||  | |||||||||| | || || |||||| | |||   ||||||| |     
T  6382377 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccat 6382278  T
Q  259 acacatactcaaacccagtcaaa 281  Q
    || ||||| ||||||||||||||    
T  6382277 acccatacccaaacccagtcaaa 6382255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 47550459 - 47550393
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtc 224  Q
    ||||| |||||||||||  |||| ||||||| ||||||||||| ||| |||||  ||||||||||||    
T  47550459 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtc 47550393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 50376488 - 50376446
Alignment:
Q  127 tttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
    ||||||||||| ||||||||  |||||||||||||||||||||    
T  50376488 tttctatttatataaaatggaaaataaattgattttctacatt 50376446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 10574523 - 10574454
Alignment:
Q  160 tttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgta 229  Q
    |||||||||| |||   |||| |||||||||||||||| || |||||||||| | |||||||||| ||||    
T  10574523 tttctacattcgggtagggtttgggtatgagttcggggcgggtacatatatccccgttacccgtcccgta 10574454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 43893218 - 43893283
Alignment:
Q  159 ttttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtc 224  Q
    |||| |||||||||||  |||| |||||||| |||||||||||||| |||||  | ||||||||||    
T  43893218 ttttttacatttgggacgggtttgggtatgaattcggggtggatacctatatacccgttacccgtc 43893283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 72 - 200
Target Start/End: Complemental strand, 12505722 - 12505594
Alignment:
Q  72 gtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttg 171  Q
    |||||||||||||| |||||| ||| | || || ||| ||||||||   |||   ||||||||||| ||||| ||| ||||||||||| || ||| ||      
T  12505722 gtcatctgaaagactgagactttgattgtgcgaatgaaatgatttaatgtttaagtttctatttatataaaaggggaaataaattgatgttttaccttca 12505623  T
Q  172 ggataggttcgggtatgagttcggggtgg 200  Q
    |||  |||| |||||||||||| ||||||    
T  12505622 ggacgggtttgggtatgagttcagggtgg 12505594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 225
Target Start/End: Complemental strand, 23927880 - 23927680
Alignment:
Q  22 tgagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggtt 121  Q
    ||||||||  |||||||  | ||||||| |||||| |||| |||| || ||||||| |||| |  |||| ||| | | ||||||||| || ||||| | |    
T  23927880 tgagagtgtaagatatggaatgagaaaagagagaattatgttaagtgattgtcatccgaaaaattgagattctaagtgtgtgagtgaaattatttatggt 23927781  T
Q  122 ttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttaccc 221  Q
    ||||||||  ||||||   |||  ||||||||||| |||||||| ||| | |||  ||| ||||| | ||||||||||||||| ||||||  ||||| ||    
T  23927780 ttggattt--atttataataaagaggtaataaattaattttcta-attcgagatgagtttgggtaggggttcggggtggatacctatatccatgttaacc 23927684  T
Q  222 gtct 225  Q
    ||||    
T  23927683 gtct 23927680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 29527820 - 29527872
Alignment:
Q  177 ggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgta 229  Q
    |||| ||||||| ||||||||||| |||||||||| | |||||||||| ||||    
T  29527820 ggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcacgta 29527872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 281
Target Start/End: Original strand, 43309442 - 43309595
Alignment:
Q  127 tttctatttatttaaaa-tgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtct 225  Q
    ||||||||||| ||||| ||||||| ||| | ||||| |||||||| || ||||  ||||||| |||| |  |||  ||||||| | | ||||||||||     
T  43309442 tttctatttatataaaaatgggtaaaaaaataattttttacatttgagacaggtatgggtatgggttcag--tgggcacatataaccccgttacccgtcc 43309539  T
Q  226 cgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    | || || |||||| |||||    |||||| |||| ||||||||||||||||||||    
T  43309540 catacccgtgttttgaaatcgggaaaaacccaaactcatactcaaacccagtcaaa 43309595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 7e-32; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 23 - 281
Target Start/End: Original strand, 3156936 - 3157194
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| || |||||  |||| |||| ||||||||||  |||| || |||||||| ||||||| |||||||||||  | |||||| | |||||||| ||    
T  3156936 gagagtgtgacatatggaaggaaaaaagagagaactataataagtgagtgtcatctaaaagaccaagactctgactacgcgagtgaaaggatttaggatt 3157035  T
Q  123 tggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccg 222  Q
    ||| ||||||||||| ||  | |||||||||||||||||||||  |||||||  |||| ||||||  |||||| |||| ||| |||||| | |||| |||    
T  3157036 tgggtttctatttatatagtaggggtaataaattgattttctatgtttgggacgggtttgggtataggttcggtgtgggtacctatatccccgttatccg 3157135  T
Q  223 tctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    || | || |||| |||| |||||   |||||||||||| ||||| |||||| |||||||    
T  3157136 tcccatacccatattttgaaatcggggaaaacctaaacccatacccaaaccaagtcaaa 3157194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 193
Target Start/End: Complemental strand, 11472949 - 11472783
Alignment:
Q  26 agtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttgg 125  Q
    |||| ||||||||  |||||| || ||||||||||| |||| || |||||||| |||||| |||||||| |||  |||||||| |||||||||| ||| |    
T  11472949 agtgtgagatatggaaggagataagagagaactatgataagtgagtgtcatctaaaagactgagactctaactacgtgagtgaaatgatttagggttttg 11472850  T
Q  126 atttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttc 193  Q
     ||||||||||| ||||| |  ||||||||||||||||| |||||||||  | || ||||||||||||    
T  11472849 gtttctatttatataaaaggtataataaattgattttct-catttgggacggatttgggtatgagttc 11472783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 78 - 243
Target Start/End: Complemental strand, 43550600 - 43550437
Alignment:
Q  78 tgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggatag 177  Q
    |||||||| |||||||||||  | ||||||| |||||||||| ||||| ||||||||||| || || ||||||||||| || |||| |||||  |||  |    
T  43550600 tgaaagactgagactctgacatt-tgagtgaaatgatttagggtttgggtttctatttatatagaaggggtaataaatagactttccacattcaggacgg 43550502  T
Q  178 gttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaa 243  Q
    ||| | |||||||||| |||||  |||||||||| || ||||| ||||||||||  ||||||||||    
T  43550501 gtttgtgtatgagttc-gggtgagtacatatatccctattaccagtctcgtatctgtgttttaaaa 43550437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 228
Target Start/End: Original strand, 3773905 - 3774127
Alignment:
Q  6 aggagcagagaaaggttgagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgag 105  Q
    ||||| ||||| |||  ||||||| |||  |||| ||||||||| | ||||||||| |||  |  |||||| |||||| | || ||||||||| ||||||    
T  3773905 aggagaagagagaggccgagagtgtgaggcatgaaaggagaaaagatagaactatgataaatgggtgtcatatgaaagtctgaaactctgactgtgtgag 3774004  T
Q  106 tgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggataca 205  Q
    | | ||||||| |  ||||| || ||| |||| ||||| ||||||||||||||||||||| ||| ||||  | || | ||||| |||| |||||| |||     
T  3774005 taaaatgattttgcgtttgggttcctaattatataaaaggggtaataaattgattttctaaattcgggacggatttgagtatgggttcagggtgggtacc 3774104  T
Q  206 tatatctctgttacccgtctcgt 228  Q
    ||||||   ||||||||||||||    
T  3774105 tatatcctcgttacccgtctcgt 3774127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 23475456 - 23475315
Alignment:
Q  71 tgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattga-ttttctacatt 169  Q
    |||||||||||| || | |||||||||| ||||||||| |||||||||  ||||| ||| |||||||  |||| ||||| |||||||| |||| ||||||    
T  23475456 tgtcatctgaaacactgggactctgactatgtgagtgaaatgatttagagtttgggtttttatttatacaaaacgggtagtaaattgatttttttacatt 23475357  T
Q  170 tgggataggttcgggtatgagttcggggtggatacatatatc 211  Q
     ||||  |||| ||||||| |||||  |||| ||||||||||    
T  23475356 cgggacgggtttgggtatgggttcgaagtgggtacatatatc 23475315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 29292553 - 29292701
Alignment:
Q  31 gagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctg----------tgagtgacatgatttaggt 120  Q
    ||||| ||| ||||||||| ||||| ||||| |||| || |||||||| ||||||||||||||||||| ||          | ||||| || |||||||     
T  29292553 gagatttgaaaggagaaaaaagagagctatgataagtgattgtcatctaaaagaccgagactctgactatgttagtgaaatttagtgaaataatttaggg 29292652  T
Q  121 tttggatttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
    ||||||||||| ||||| ||||| ||||| |||||||||||||||||||    
T  29292653 tttggatttctctttatataaaaggggtagtaaattgattttctacatt 29292701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 19440203 - 19440062
Alignment:
Q  71 tgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattga-ttttctacatt 169  Q
    ||||||||| || || |||||||||||| ||||||||| |||||||||  ||||| |||||||||||   ||| ||||  |||||||| |||| ||||||    
T  19440203 tgtcatctggaacactgagactctgactatgtgagtgaaatgatttagagtttgggtttctatttataccaaaggggtggtaaattgatttttttacatt 19440104  T
Q  170 tgggataggttcgggtatgagttcggggtggatacatatatc 211  Q
     ||||  |||| ||||||| |||||  |||| ||||||||||    
T  19440103 cgggacgggtttgggtatgggttcgaagtgggtacatatatc 19440062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 174
Target Start/End: Original strand, 31345387 - 31345530
Alignment:
Q  31 gagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttc 130  Q
    ||||||||  || |||||| |||||| |||| |||| || |||||||| || ||| |||||| ||| | ||||||||| ||||| |||  ||||  ||||    
T  31345387 gagatatggaagaagaaaagagagaattatgataagtgagtgtcatctaaatgactgagactttgattgtgtgagtgaaatgatatagagtttgagtttc 31345486  T
Q  131 tatttatttaaaatgggtaataaattgattttctacatttggga 174  Q
    ||||||| |||||  |||| |||||||||||| |||||| ||||    
T  31345487 tatttatataaaaatggtagtaaattgattttttacattcggga 31345530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 23533797 - 23533655
Alignment:
Q  71 tgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatggg-taataaattga-ttttctacat 168  Q
    |||||||||||| || |||||||||||| ||||||||| |||||||||  ||||| |||||| ||||  |||| ||| || |||||||| |||| |||||    
T  23533797 tgtcatctgaaacactgagactctgactatgtgagtgaaatgatttagagtttgggtttctaattatacaaaaggggttagtaaattgatttttttacat 23533698  T
Q  169 ttgggataggttcgggtatgagttcggggtggatacatatatc 211  Q
    | ||||   ||| ||||||| |||||  |||| ||||||||||    
T  23533697 tcgggacgagtttgggtatgggttcgaagtgggtacatatatc 23533655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 4101472 - 4101593
Alignment:
Q  100 tgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtg 199  Q
    ||||||||| |||||| ||| ||||  ||| ||||||  |||||| |||||||||||||||||| |||||  |||  |||| ||||||| |||| || ||    
T  4101472 tgtgagtgaaatgattaagggtttgagtttttatttaaataaaattggtaataaattgattttcaacattcaggacgggttagggtatgggttcaggatg 4101571  T
Q  200 gatacatatatctctgttaccc 221  Q
    | |||||||||| |||| ||||    
T  4101572 ggtacatatatccctgtaaccc 4101593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 31425998 - 31426119
Alignment:
Q  160 tttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaa 259  Q
    |||||||||| |||   |||| ||||||| |||||||||||||||||||||| | |||||||||||| || || | |||| |||||   ||||||| |||    
T  31425998 tttctacattcgggtagggtttgggtatgcgttcggggtggatacatatatccccgttacccgtctcatacccgtatttttaaatcggggaaaacccaaa 31426097  T
Q  260 cacatactcaaacccagtcaaa 281  Q
    |  ||||  |||||||||||||    
T  31426098 ccaataccaaaacccagtcaaa 31426119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 18683981 - 18684085
Alignment:
Q  177 ggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccag 276  Q
    |||| ||||||| ||||| |||||||||||||||| |||||||||||| |||| || | |||| |||||   |||||||  ||| ||||| |||||| ||    
T  18683981 ggtttgggtatgggttcgaggtggatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaacccgaacccatacccaaacctag 18684080  T
Q  277 tcaaa 281  Q
    |||||    
T  18684081 tcaaa 18684085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 27063127 - 27063249
Alignment:
Q  159 ttttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaa 258  Q
    ||||||||||| |||   |||| ||||||||||||||||||  |||||||||| | |||| |||||  ||| || | |||| ||||| | ||||||  ||    
T  27063127 ttttctacattcgggtagggtttgggtatgagttcggggtgagtacatatatccccgttatccgtcctgtacccgtattttgaaatcgaggaaaactcaa 27063226  T
Q  259 acacatactcaaacccagtcaaa 281  Q
    || ||||| ||||||||||||||    
T  27063227 actcatacccaaacccagtcaaa 27063249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 37217857 - 37217971
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| ||||||||  |||||| || ||||||||||| || | || |||||| ||||| ||||||||||||| | ||| ||| | ||||||||||  |    
T  37217857 gagagtgtgagatatggaaggagagaagagagaactatgatatgtgagtgtcatatgaaaaaccgagactctgattgtgttagtaaaatgatttaggcat 37217956  T
Q  123 tggatttctatttat 137  Q
    ||  |||||||||||    
T  37217957 tgagtttctatttat 37217971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 281
Target Start/End: Original strand, 27063324 - 27063445
Alignment:
Q  160 tttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaa 259  Q
    |||||||||| |||   |||| ||||||||||||||||||| |||||||||  | |||||||||| |||| || | || | |||||   ||||||| | |    
T  27063324 tttctacattcgggtagggttggggtatgagttcggggtgggtacatatattcccgttacccgtcccgtacccgtattattaaatcggggaaaaccgaga 27063423  T
Q  260 cacatactcaaacccagtcaaa 281  Q
    | ||||| ||||||||||||||    
T  27063424 cccatacccaaacccagtcaaa 27063445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 281
Target Start/End: Complemental strand, 30839237 - 30839116
Alignment:
Q  160 tttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaa 259  Q
    |||||||||| |||  ||||| ||| ||||||||||||| ||||||||||||   ||||| |||| | || || | |||| ||||||  ||||||  |||    
T  30839237 tttctacattcgggtaaggtttgggcatgagttcggggtagatacatatatccacgttactcgtcccatacccgtattttgaaatcagggaaaactcaaa 30839138  T
Q  260 cacatactcaaacccagtcaaa 281  Q
    | ||||| ||||||||||||||    
T  30839137 ctcatacccaaacccagtcaaa 30839116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 281
Target Start/End: Original strand, 12980373 - 12980488
Alignment:
Q  166 catttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacata 265  Q
    |||||||||  |||| ||||||| ||||||||||| ||| |||||  |  ||||||||| | || || |||||| |||||   ||||||| |||| ||||    
T  12980373 catttgggacgggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcggggaaaaccaaaacccata 12980472  T
Q  266 ctcaaacccagtcaaa 281  Q
    | ||||||||||||||    
T  12980473 cccaaacccagtcaaa 12980488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 17885453 - 17885576
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaaccta 257  Q
    ||||| |||||||||||  |||  ||||||| ||||||||| |  || |||||  | |||||||||| | || |||||||||||||||   ||||||| |    
T  17885453 attttttacatttgggacgggtatgggtatgggttcggggttggaacctatatacccgttacccgtcccatacccatgttttaaaatcggggaaaaccca 17885552  T
Q  258 aacacatactcaaacccagtcaaa 281  Q
     || |||| |||||||||||||||    
T  17885553 tacccatattcaaacccagtcaaa 17885576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 27896556 - 27896457
Alignment:
Q  182 gggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    ||||||||||||||||| | | |||||| | | |||||||||| | || ||||||||| |||| |  ||||||| |||| ||||| |||||||| |||||    
T  27896556 gggtatgagttcggggttggtgcatataaccccgttacccgtcccatacccatgttttgaaataagggaaaacccaaacccatacccaaacccaatcaaa 27896457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 8265713 - 8265794
Alignment:
Q  141 aaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgt 223  Q
    |||||| |||| ||||||||||||||||| |  | ||||| || ||||||||  |||||||||| ||||||| ||||||||||    
T  8265713 aaatggataatgaattgattttctacattcgaaacaggtttggatatgagtt-agggtggatacctatatctttgttacccgt 8265794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 28309482 - 28309568
Alignment:
Q  160 tttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatca 246  Q
    |||||||||| |||   |||| ||||||||||||||||| |||||||||||  | |||||||||| |||| || | |||| ||||||    
T  28309482 tttctacattcgggtagggtttgggtatgagttcggggtagatacatatattcccgttacccgtcccgtacccgtattttgaaatca 28309568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 35074459 - 35074581
Alignment:
Q  159 ttttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaa 258  Q
    |||| |||||||||||  |||| ||||||| ||||||| ||| ||| |||||  | |||||||||| | || || |||||||| |||   ||||||| |     
T  35074459 ttttttacatttgggacgggtttgggtatgggttcgggttgggtacctatatacccgttacccgtcccatacccgtgttttaagatcggggaaaacccat 35074558  T
Q  259 acacatactcaaacccagtcaaa 281  Q
    || ||||| ||||||||||||||    
T  35074559 acccatacccaaacccagtcaaa 35074581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 17851843 - 17851908
Alignment:
Q  159 ttttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtc 224  Q
    |||| |||||||||||| |||| ||||||| ||||||| ||| ||| ||||| || ||||||||||    
T  17851843 ttttttacatttgggatgggtttgggtatgggttcgggatgggtacctatatatccgttacccgtc 17851908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 21750789 - 21750857
Alignment:
Q  177 ggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatc 245  Q
    |||| ||||||||||||| ||||| |||||||||| | || ||||||||| ||||| | |||| |||||    
T  21750789 ggtttgggtatgagttcgaggtgggtacatatatccccgtcacccgtctcatatccgtattttgaaatc 21750857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 22973395 - 22973499
Alignment:
Q  177 ggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccag 276  Q
    |||| ||||||| ||||| ||||| |||| ||||| |  ||||||||| |||| || | |||| |||||   ||||||| |||| ||||| |||||||||    
T  22973395 ggtttgggtatgggttcgaggtgggtacagatatccccattacccgtcccgtacccgtattttgaaatcgtggaaaacccaaacccatacccaaacccag 22973494  T
Q  277 tcaaa 281  Q
    |||||    
T  22973495 tcaaa 22973499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 25979998 - 25979954
Alignment:
Q  182 gggtatgagttcggggtggatacatatatctctgttacccgtctc 226  Q
    ||||||||||| ||||||| ||||||||| || ||||||||||||    
T  25979998 gggtatgagtttggggtgggtacatatatatccgttacccgtctc 25979954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 1e-27; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 39219102 - 39219329
Alignment:
Q  18 aggttgagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgattta 117  Q
    |||||||||||| | ||||||| ||||||||  ||| ||||||| |||| || |||||| ||||| |  |||||| ||||| |||||| || ||||||||    
T  39219102 aggttgagagtgtgcgatatgaaaggagaaaggagataactatgataagtgagtgtcatatgaaaaaatgagactgtgactgtgtgagcgaaatgattta 39219201  T
Q  118 ggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgtt 217  Q
    || ||||  ||||||||||| |||||  ||||||||||| ||||||||||||| | |   ||| ||||||| ||||||||||| ||||| |||| | |||    
T  39219202 gggtttgagtttctatttatataaaagaggtaataaattaattttctacatttagaacgagtttgggtatgggttcggggtgggtacatgtatccccgtt 39219301  T
Q  218 acccgtctcgtatccatgttttaaaatc 245  Q
    ||  ||  |||| || ||||||||||||    
T  39219302 acttgttccgtacccgtgttttaaaatc 39219329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 211
Target Start/End: Complemental strand, 41477192 - 41477004
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| || |||||| ||| || || |||||| |||| |||| |  ||||||||||||||| |||||| ||||| ||||| ||| || ||||||| ||    
T  41477192 gagagtgtgaaatatgaaaggggataaaagagaattatgataagtgggtgtcatctgaaagacggagactttgactgtgtgaatgaaataatttagggtt 41477093  T
Q  123 tggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatc 211  Q
    |  |||||| ||||| ||||| |||||| ||||||||||||| | || ||||  |||| |||||||  |||||||||| ||||||||||    
T  41477092 tccatttctctttatataaaaagggtaacaaattgattttctgctttcgggacgggtttgggtatggattcggggtgggtacatatatc 41477004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 36421623 - 36421791
Alignment:
Q  31 gagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttc 130  Q
    ||||||||| ||||||||| ||||||||||| |||| || || |||||||||||  |||||||||||| ||||| ||| |||||||||  || |  |||     
T  36421623 gagatatgaaaggagaaaagagagaactatgataagtgattgccatctgaaagattgagactctgactgtgtgaatgaaatgatttagagttcgagtttt 36421722  T
Q  131 tatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtg 199  Q
    ||||||| ||| | || |||||||||||||||||| ||| | ||   ||| |||||| |||||||||||    
T  36421723 tatttatataagagggataataaattgattttctatattcgagacgagtttgggtataagttcggggtg 36421791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 13692493 - 13692642
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| ||||||||  ||||||||| ||||||||||  |||| || |||| |||||||||   ||||||| | | |||| |||| |||||||||| ||    
T  13692493 gagagtgtgagatatggaaggagaaaagagagaactataataagtgagtgtcgtctgaaagagtaagactctaattgtgtgggtgaaatgatttagggtt 13692592  T
Q  123 tggatttctatttatttaaaatgggtaat-aaattgattttctacatttg 171  Q
    | | ||||||||||| ||||| || |||| ||||||||||||||||||||    
T  13692593 ttggtttctatttatataaaagggataataaaattgattttctacatttg 13692642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 134 - 279
Target Start/End: Original strand, 13798198 - 13798343
Alignment:
Q  134 ttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatcca 233  Q
    |||| ||||| |||||||||||||||||||||||||| |||| ||||  ||||||| || |||||||||| |||||||   ||||||| |||| || ||     
T  13798198 ttatataaaaggggtaataaattgattttctacatttaggatgggtttaggtatgaatttggggtggataaatatatcctcgttacccatctcatacccg 13798297  T
Q  234 tgttttaaaatcaatgaaaacctaaacacatactcaaacccagtca 279  Q
    |||||| |||||    |||||| |||| ||||| ||||||||||||    
T  13798298 tgttttgaaatcgggaaaaacccaaactcatacccaaacccagtca 13798343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 198
Target Start/End: Complemental strand, 42729184 - 42729009
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| || |||||  |||||| || ||||||||||| |||| |  ||| ||||||||||| |||||||||||| ||||||||| |||||||||  |     
T  42729184 gagagtgtgatatatggaaggagacaagagagaactatgataagtgggtgttatctgaaagactgagactctgactgtgtgagtgaaatgatttagtgta 42729085  T
Q  123 tggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggt 198  Q
    |   ||||||||||| ||||| || | ||||||| ||||||||||||  | |   ||| |||||||||||||||||    
T  42729084 taagtttctatttatataaaagggatgataaatttattttctacattcagaacgtgtttgggtatgagttcggggt 42729009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 48125819 - 48125700
Alignment:
Q  127 tttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctc 226  Q
    ||||||||||| |||||  |||| ||||||||||||||||||| | ||   ||| ||||||| ||||||||||||||| ||||||   |||||||||| |    
T  48125819 tttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcggggtggatacctatatcctcgttacccgtccc 48125720  T
Q  227 gtatccatgttttaaaatca 246  Q
    ||| || |||||||||||||    
T  48125719 gtacccgtgttttaaaatca 48125700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 167 - 281
Target Start/End: Complemental strand, 44615571 - 44615457
Alignment:
Q  167 atttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatac 266  Q
    ||||||||  |||| ||||||||||| ||||||| ||| |||||  |||||||||||| | || || |||||| ||||||  ||||||| |||| |||||    
T  44615571 atttgggacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatac 44615472  T
Q  267 tcaaacccagtcaaa 281  Q
     ||||||||||||||    
T  44615471 ccaaacccagtcaaa 44615457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 167 - 281
Target Start/End: Original strand, 44792998 - 44793112
Alignment:
Q  167 atttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatac 266  Q
    ||||||||  |||| ||||||||||| ||||||| ||| |||||  |||||||||||| | || || |||||| ||||||  ||||||| |||| |||||    
T  44792998 atttgggacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatac 44793097  T
Q  267 tcaaacccagtcaaa 281  Q
     ||||||||||||||    
T  44793098 ccaaacccagtcaaa 44793112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 204
Target Start/End: Original strand, 8880305 - 8880478
Alignment:
Q  31 gagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttc 130  Q
    ||||||||  ||||||||| |||||| |||| |||   | ||||| ||||||||| | |||||| ||| ||||||||| ||||||||   ||||  ||||    
T  8880305 gagatatggaaggagaaaagagagaattatgataaataagtgtcaactgaaagactgcgactctaactttgtgagtgaaatgatttaaagtttgagtttc 8880404  T
Q  131 tatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatac 204  Q
    |||||||  |||| |||||||||||| |||||   |||||||||  |||| ||||||| || | ||||||||||    
T  8880405 tatttataaaaaaggggtaataaatttatttttagcatttgggacgggtttgggtatgggtccagggtggatac 8880478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 211
Target Start/End: Complemental strand, 25155067 - 25154879
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| ||||| ||| ||||||||| ||||||||||| |||| || |||||||| || |||||||||||| ||  ||  ||||| || ||||| | ||    
T  25155067 gagagtgtgagatttgaaaggagaaaaaagagaactatgataagtgagtgtcatctaaatgaccgagactctcacagtgatagtgaaataatttaaggtt 25154968  T
Q  123 tggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatc 211  Q
    ||||||||  |||   ||||| ||||| | ||||||||||||| |||  |||  |||| ||| |||||||||  |||| ||| ||||||    
T  25154967 tggatttccctttgaataaaaggggtagtgaattgattttctaaattcaggacgggtttgggcatgagttcgaagtgggtacttatatc 25154879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 162
Target Start/End: Original strand, 16903353 - 16903503
Alignment:
Q  6 aggagcagagaaaggttgagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgag 105  Q
    ||||| ||| |||||| ||||||| || |||||  ||||||||| ||||||||||| |||| || |||||      |||| || ||||||| | ||||||    
T  16903353 aggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagagaactatgataagtgattgtca------agactgaaactctgattgtgtgag 16903446  T
Q  106 tgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgatttt 162  Q
    ||| || ||||||| ||||  ||| ||||||| ||||| ||| ||||||||||||||    
T  16903447 tgaaataatttagggtttgagtttatatttatataaaaagggcaataaattgatttt 16903503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 10450162 - 10450078
Alignment:
Q  160 tttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaat 244  Q
    |||||||||| |||   |||| ||||||||||||||||||| |||||||||| |||||||||| | |||| || | |||||||||    
T  10450162 tttctacattcgggtagggtttgggtatgagttcggggtgggtacatatatccctgttacccgccccgtacccgtattttaaaat 10450078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 33293673 - 33293614
Alignment:
Q  110 atgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
    |||||||||| ||||  |||||||| || ||||||||||| |||||||||||||||||||    
T  33293673 atgatttagggtttgagtttctattgatataaaatgggtactaaattgattttctacatt 33293614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 12718870 - 12718806
Alignment:
Q  164 tacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgta 229  Q
    |||||||||| |||||| ||||||| |||| |||||| ||||||||| || |||||||||||||||    
T  12718870 tacatttggg-taggtttgggtatgggttcagggtgggtacatatatttccgttacccgtctcgta 12718806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 23058469 - 23058573
Alignment:
Q  177 ggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccag 276  Q
    |||| ||||||| ||||||||||| ||| |||||| | |||||||||||||||  |   |||| |||||   ||||||  |||| |||||||||||||||    
T  23058469 ggtttgggtatgggttcggggtgggtacctatatccccgttacccgtctcgtactcgcattttgaaatcggagaaaactcaaacccatactcaaacccag 23058568  T
Q  277 tcaaa 281  Q
    |||||    
T  23058569 tcaaa 23058573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 209
Target Start/End: Original strand, 23719510 - 23719637
Alignment:
Q  81 aagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggtt 180  Q
    ||||| ||||||| |||| ||| ||||| ||||||||   ||||  ||||||||||| ||||| ||||| |||||||| ||| |||||| ||||   |||    
T  23719510 aagactgagactcagactgtgttagtgaaatgatttatagtttgagtttctatttatataaaaagggtagtaaattga-tttgtacattcgggacgagtt 23719608  T
Q  181 cgggtatgagttcggggtggatacatata 209  Q
     | ||||||||||||| ||||||| ||||    
T  23719609 tgagtatgagttcgggatggatacctata 23719637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 29871390 - 29871267
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaaccta 257  Q
    |||||||||||| ||||  |||| |||||||||||| |||||| ||| |||||  | |||||| ||| | || ||||||||| |||||   ||||||| |    
T  29871390 attttctacattcgggacgggtttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgttttgaaatcggagaaaaccca 29871291  T
Q  258 aacacatactcaaacccagtcaaa 281  Q
    ||| ||||| |||||  |||||||    
T  29871290 aactcatacccaaacttagtcaaa 29871267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 51421842 - 51421965
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaaccta 257  Q
    ||||| |||||||||||  |||| ||||||| ||||||||||| |||||||||   ||||||||||| | || || |||||| | |||    |||||| |    
T  51421842 attttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttgagatcgggaaaaaccca 51421941  T
Q  258 aacacatactcaaacccagtcaaa 281  Q
     || ||||| ||||||||||||||    
T  51421942 tacccatacccaaacccagtcaaa 51421965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 12494995 - 12495117
Alignment:
Q  159 ttttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaa 258  Q
    ||||||||||||||||  |||| ||||||| ||||| ||||| ||| |||||  | ||||| |||| | ||||| |||||| |||||    |||||| ||    
T  12494995 ttttctacatttgggacgggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgttttgaaatcgggaaaaaccaaa 12495094  T
Q  259 acacatactcaaacccagtcaaa 281  Q
    || |||||  |||||||||||||    
T  12495095 acccataccgaaacccagtcaaa 12495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 205
Target Start/End: Original strand, 25181102 - 25181235
Alignment:
Q  73 tcatctgaaagaccgagactctgactctgtgagtgacatgatttaggt-tttggatttctatttatttaaaatgggtaataaattgattttctacatttg 171  Q
    |||||||||||||  ||||||| ||| ||||||||| || ||||| |  ||| | ||||||||||| || || || || |||||||| ||| |||| |||    
T  25181102 tcatctgaaagacaaagactctaactatgtgagtgaaattatttaagagtttaggtttctatttatatagaagggatagtaaattgactttttacaattg 25181201  T
Q  172 ggataggttcgggtatgagttcggggtggataca 205  Q
    |||   ||| | |||||||||| |||||||||||    
T  25181202 ggacgagtttgagtatgagttcagggtggataca 25181235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 35069968 - 35069927
Alignment:
Q  184 gtatgagttcggggtggatacatatatctctgttacccgtct 225  Q
    ||||| ||||||||||| |||||||||| |||||||||||||    
T  35069968 gtatgggttcggggtgggtacatatatccctgttacccgtct 35069927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 41 - 169
Target Start/End: Complemental strand, 4802 - 4674
Alignment:
Q  41 aggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttattta 140  Q
    |||| |||| ||||||||||| |||| || ||| |||| |||||||| |||||||||| ||||||||| |||||||||  ||| ||||||||||||| ||    
T  4802 aggaaaaaagagagaactatgataagtgagtgttatctaaaagaccgtgactctgactgtgtgagtgaaatgatttagagttttgatttctatttatata 4703  T
Q  141 aaatgggtaataaattgattttctacatt 169  Q
    ||| |||| |||| |||||||||||||||    
T  4702 aaaggggttataatttgattttctacatt 4674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1322 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 960 - 1105
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| ||||||||| ||||||||| |||||| |||| |||| || |||||||| |||||  |||||| ||||   |||||||| |||||||| | ||    
T  960 gagagtgtgagatatgaaaggagaaaa-agagaattatgataagtgattgtcatcttaaagaatgagactttgaccacgtgagtgaaatgatttaagatt 1058  T
Q  123 tggatttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
    ||  ||||||||||| |||||||||||||||||| ||||||||||||    
T  1059 tgagtttctatttatataaaatgggtaataaattaattttctacatt 1105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 9e-25; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 27252416 - 27252561
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| ||||||||  ||||||||  ||||||||| | |||| || ||||||||||||||| || ||||| ||| ||||||||| |||||||| | ||    
T  27252416 gagagtgtgagatatggaaggagaaag-agagaactaagataagtgagtgtcatctgaaagactgatactctaactgtgtgagtgaaatgatttatgatt 27252514  T
Q  123 tggatttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
    | | ||||||||||| ||||||||||||||||||||  |||||||||    
T  27252515 ttggtttctatttatataaaatgggtaataaattgaaattctacatt 27252561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 37032290 - 37032192
Alignment:
Q  71 tgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatt 169  Q
    |||||||||||||||||||||||||| | | ||||||| |||||||||| ||||  ||| ||||||| |||||||||||||||||| ||||||||||||    
T  37032290 tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagggtttgagtttttatttatataaaatgggtaataaattaattttctacatt 37032192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 134 - 283
Target Start/End: Original strand, 42243346 - 42243495
Alignment:
Q  134 ttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatcca 233  Q
    |||| ||||| |||||||||||||||||||||||||| |||| |||| |||||||| || |||||||||| |||||||   ||||||| |||| || ||     
T  42243346 ttatataaaaggggtaataaattgattttctacatttaggatgggtttgggtatgaatttggggtggataaatatatcctcgttacccatctcatacccg 42243445  T
Q  234 tgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaacc 283  Q
    ||| || |||||    |||||| |||| ||||| ||||||||||||||||    
T  42243446 tgtattgaaatcgggaaaaacccaaactcatacccaaacccagtcaaacc 42243495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 773032 - 772837
Alignment:
Q  24 agagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggtttt 123  Q
    |||||| |||| |||| ||||||||| |||||| ||||  ||| || ||||||||  |||   ||||||  || | ||||||||| |||||| | | |||    
T  773032 agagtgtgagacatgaaaggagaaaagagagaaatatgacaagcgagtgtcatctagaagtgtgagacttagattgtgtgagtgaaatgattcaaggttt 772933  T
Q  124 ggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacc 220  Q
    |  |||||||||||  |||| ||||||||||||||||||||| |||||||| |  || ||| ||||||||||||||| || ||||||| ||||||||    
T  772932 gagtttctatttatacaaaa-gggtaataaattgattttctatatttgggacatatttgggcatgagttcggggtgggtagatatatccctgttacc 772837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 30904988 - 30904833
Alignment:
Q  90 actctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatga 189  Q
    ||||||||| | ||||||| |||||| ||| ||||| ||||||||||| ||||| ||||| ||||||||||| ||||||| | ||  | || |||||||     
T  30904988 actctgactatatgagtgaaatgattaagggtttgggtttctatttatataaaaggggtagtaaattgatttcctacattcgagacggatttgggtatgg 30904889  T
Q  190 gttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatca 246  Q
    ||||||||||| ||| |||||| | | |||||||| |||| || |||||| ||||||    
T  30904888 gttcggggtgggtacctatatccccg-tacccgtcccgtacccgtgttttgaaatca 30904833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 3414765 - 3414627
Alignment:
Q  31 gagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttc 130  Q
    ||||||||  |||||| || | |||||| ||  |||||| ||||| || ||||| ||||||| ||||| ||||||||| |||||||||| ||| |||||     
T  3414765 gagatatggaaggagataagatagaactttgagaagagagtgtcaactaaaagaacgagactttgactatgtgagtgaaatgatttagggtttcgatttt 3414666  T
Q  131 tatttatttaaaatgggtaataaattgattttctacatt 169  Q
    |||||||  |||| ||||| |||| ||||||||||||||    
T  3414665 tatttatagaaaaggggtattaaaatgattttctacatt 3414627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 3386088 - 3385950
Alignment:
Q  31 gagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttc 130  Q
    ||||||||  |||||| || |||||||| || ||||||| ||||| || ||||||||||||| | ||| ||| ||||| |||||||||| ||| |||||     
T  3386088 gagatatggaaggagataagagagaactttgataagagagtgtcaactaaaagaccgagactttaactatgtaagtgaaatgatttaggatttcgatttt 3385989  T
Q  131 tatttatttaaaatgggtaataaattgattttctacatt 169  Q
    |||||||  |||| || || |||| ||||||| ||||||    
T  3385988 tatttatagaaaagggttactaaaatgattttttacatt 3385950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 100 - 254
Target Start/End: Original strand, 27937664 - 27937817
Alignment:
Q  100 tgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtg 199  Q
    ||||||||| |||||||||| ||| | ||||||||||| |||||   |||||||||| |||| |||||||  || |||||| ||||||||||||| ||||    
T  27937664 tgtgagtgaaatgatttagggtttaggtttctatttatataaaagctgtaataaattaatttcctacattcagg-taggtttgggtatgagttcgtggtg 27937762  T
Q  200 gatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaac 254  Q
      ||| | |||| |||||||| |||   ||  |||||||||||||||| ||||||    
T  27937763 tgtacctctatccctgttacctgtcctatacacatgttttaaaatcaaggaaaac 27937817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 26207135 - 26207278
Alignment:
Q  23 gagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttt 122  Q
    ||||||| |||||||| ||||||||||  ||||||||||  ||| || |||||||| |||||  |||||||| ||| |||||     |||||||||| ||    
T  26207135 gagagtgtgagatatgggaggagaaaaatgagaactatgacaagtgagtgtcatctaaaagatggagactctaactgtgtgaa----atgatttagggtt 26207230  T
Q  123 tggatttctatttatttaaaatg-ggtaataaattgattttctacatt 169  Q
    ||| |||| |||||| |||||   ||||||||||||||| ||||||||    
T  26207231 tgggtttcaatttatataaaaaaaggtaataaattgattatctacatt 26207278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 4557410 - 4557287
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatat-ctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacct 256  Q
    ||||||| |||| ||||||| || ||||||| ||||||||||| ||| ||||| ||| |||||||||| | || ||||||||| ||| |   |||||||     
T  4557410 attttctgcattcgggatagatttgggtatgggttcggggtgggtacctatatactc-gttacccgtcccatacccatgttttgaaaacggggaaaaccc 4557312  T
Q  257 aaacacatactcaaacccagtcaaa 281  Q
    |||| ||||| ||||||||||||||    
T  4557311 aaacccatacccaaacccagtcaaa 4557287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 10043363 - 10043264
Alignment:
Q  182 gggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    ||||||| ||||||||||| | |||||| | | |||||||||| | || ||||||||| ||| ||  ||||||| |||| ||||| ||||||||||||||    
T  10043363 gggtatgggttcggggtgggtgcatataaccccgttacccgtcccatacccatgttttgaaaccagggaaaacccaaacccatacccaaacccagtcaaa 10043264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 44172609 - 44172732
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaaccta 257  Q
    ||||| |||||||||||  |||| ||||||| ||||||||||| ||| |||||  | |||||||||| | || || |||||| | |||   ||||||| |    
T  44172609 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 44172708  T
Q  258 aacacatactcaaacccagtcaaa 281  Q
     || ||||||||||||||||||||    
T  44172709 tacccatactcaaacccagtcaaa 44172732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 44179309 - 44179432
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaaccta 257  Q
    ||||| |||||||||||  |||| ||||||| ||||||||||| ||| |||||  | |||||||||| | || || |||||| | |||   ||||||| |    
T  44179309 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 44179408  T
Q  258 aacacatactcaaacccagtcaaa 281  Q
     || ||||||||||||||||||||    
T  44179409 tacccatactcaaacccagtcaaa 44179432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 39728654 - 39728777
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaaccta 257  Q
    ||||| |||||||||||  |||| ||||||| ||||||||||| ||| |||||  | ||||||| || | || || | |||| | ||| | |||||||||    
T  39728654 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccatcccatacccgtattttgagatcgaggaaaaccta 39728753  T
Q  258 aacacatactcaaacccagtcaaa 281  Q
     || ||||| ||||||||||||||    
T  39728754 tactcatacccaaacccagtcaaa 39728777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 34119640 - 34119726
Alignment:
Q  159 ttttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatc 245  Q
    |||||| |||||||||  | || ||||||| ||||||||||| ||| |||||  |||||| ||||||| || || ||||||||||||    
T  34119640 ttttctgcatttgggacggatttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacccgtgttttaaaatc 34119726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 34592993 - 34593099
Alignment:
Q  12 agagaaaggttgagagtgcgagatatgagaggagaaaatagagaactatggtaagagaatgtcatctgaaagaccgagactctgactctgtgagtgacat 111  Q
    ||||| |||| ||||||| ||||||||  ||||||||  | ||||||||| |||| || ||| || |||||||||||||| || | | ||| ||||| ||    
T  34592993 agagagaggtcgagagtgtgagatatggaaggagaaacaatagaactatgataagtgagtgttatgtgaaagaccgagaccctaattgtgtaagtgaaat 34593092  T
Q  112 gatttag 118  Q
    |||||||    
T  34593093 gatttag 34593099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 17146255 - 17146190
Alignment:
Q  158 attttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgt 223  Q
    ||||| |||||||||||  |||| | ||||| ||||||||||||||| |||||  |||||||||||    
T  17146255 attttttacatttgggaagggtttgtgtatgggttcggggtggatacctatataactgttacccgt 17146190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 31126899 - 31126834
Alignment:
Q  159 ttttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtc 224  Q
    |||||| |||||||||   ||| ||||||||||||||||||||||| |||||   |||||||||||    
T  31126899 ttttctgcatttgggacgagtttgggtatgagttcggggtggatacctatatacatgttacccgtc 31126834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 40890299 - 40890382
Alignment:
Q  127 tttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtggatacatatatc 211  Q
    ||||||||||| || || || |||||||||||||||||||||||| |||  | | ||||||| |||||| || ||||| ||||||    
T  40890299 tttctatttatatagaa-ggataataaattgattttctacatttgagatgagcttgggtatgggttcggcgtagatacttatatc 40890382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 182 - 281
Target Start/End: Original strand, 211371 - 211470
Alignment:
Q  182 gggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||||||| || | |||| |||||   ||||||| |||| ||||| ||||| ||||||||    
T  211371 gggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagtcaaa 211470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 17616 - 17473
Alignment:
Q  102 tgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttgggataggttcgggtatgagttcggggtgga 201  Q
    ||||||| |||||||| | ||||  ||||||||||| ||||||||||||||||| | |||| |||||| || | | ||| || || | ||| ||| ||||    
T  17616 tgagtgaaatgatttatggtttgcgtttctatttatataaaatgggtaataaatgggttttatacattcggtacatgtttggataagggtttgggatgga 17517  T
Q  202 tacatatatctctgttacccgtctcgtatccatgttttaaaatc 245  Q
    ||| |||||| | ||||||| ||  ||||||||||||| |||||    
T  17516 tacctatatccccgttacccttcctgtatccatgttttgaaatc 17473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 281
Target Start/End: Original strand, 67766 - 67855
Alignment:
Q  192 tcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    ||||||||| |||||||||| | |||| ||||| ||||||| | ||||||||||   ||||| | |||| ||||||||||||||||||||    
T  67766 tcggggtgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaatccaaacccatactcaaacccagtcaaa 67855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 281
Target Start/End: Original strand, 75609 - 75698
Alignment:
Q  192 tcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    ||||||||| |||||||||| | |||| ||||| ||||||| | ||||||||||   ||||| | |||| ||||||||||||||||||||    
T  75609 tcggggtgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaatccaaacccatactcaaacccagtcaaa 75698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 105572 - 105503
Alignment:
Q  160 tttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgta 229  Q
    |||| |||||||||   |||| ||||||| ||||||||||| |||||||||| |||||||||||| ||||    
T  105572 tttcaacatttgggtagggtttgggtatgggttcggggtgggtacatatatccctgttacccgtcccgta 105503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 128224 - 128155
Alignment:
Q  160 tttctacatttgggataggttcgggtatgagttcggggtggatacatatatctctgttacccgtctcgta 229  Q
    ||||||||||||||   |||| ||||||| ||||||||||| |||||||||| |  ||||||||| ||||    
T  128224 tttctacatttgggtagggtttgggtatgggttcggggtgggtacatatatccccattacccgtcccgta 128155  T

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Target: scaffold0184 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 2978 - 3075
Alignment:
Q  184 gtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaacccagtcaaa 281  Q
    ||||| ||||||||||| |||||||||| | |||| |||||  ||| || | |||| |||||   ||||||| |||| ||||| ||||||||||||||    
T  2978 gtatgggttcggggtgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaaactcatacccaaacccagtcaaa 3075  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 33400 - 33493
Alignment:
Q  182 gggtatgagttcggggtggatacatatatctctgttacccgtctcgtatccatgttttaaaatcaatgaaaacctaaacacatactcaaaccca 275  Q
    ||||||| ||||||||||| |||||||||  | |||||||||| | || || |||||| |||||   ||||||| |||| ||||| ||||||||    
T  33400 gggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccatacccaaaccca 33493  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 197337 - 197296
Alignment:
Q  265 actcaaacccagtcaaacccgtcaaattgggtttgtttcgga 306  Q
    ||||||||| |||||||||||||||||| |||||| ||||||    
T  197337 actcaaacctagtcaaacccgtcaaattaggtttgattcgga 197296  T

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Target: scaffold0157 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 72 - 200
Target Start/End: Original strand, 14755 - 14883
Alignment:
Q  72 gtcatctgaaagaccgagactctgactctgtgagtgacatgatttaggttttggatttctatttatttaaaatgggtaataaattgattttctacatttg 171  Q
    |||||||||||||| |||||| ||| | || || ||| ||||||||   |||   ||||||||||| ||||| ||| ||||||||||| || ||| ||      
T  14755 gtcatctgaaagactgagactttgattgtgcgaatgaaatgatttaatgtttaagtttctatttatataaaaggggaaataaattgatgttttaccttca 14854  T
Q  172 ggataggttcgggtatgagttcggggtgg 200  Q
    |||  |||| |||||||||||| ||||||    
T  14855 ggacgggtttgggtatgagttcagggtgg 14883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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