View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0839_high_21 (Length: 291)
Name: NF0839_high_21
Description: NF0839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0839_high_21 |
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Alignment Details
Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 30 - 276
Target Start/End: Original strand, 27567276 - 27567522
Alignment:
| Q |
30 |
gaaaccaatgactaggatcatcctcgacattgcattcttttatgttgtataaacatacacaatagcaatatgttctgcttcttcaaaaaccacattgtgg |
129 |
Q |
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| T |
27567276 |
gaaaccaatgacgaggatcatcctcgacattacattcttttatgttgtataaacatacacaatagcaatatgttctgcttcttcaaaaaccacattgtgg |
27567375 |
T |
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| Q |
130 |
caacgattcaatctcgtttgactgcgaacactttttcaggcgcataaattctcagttggtaacctttggggtgatttattcagtaattcaaattctatac |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27567376 |
caacgattcaatctcgtttgactgcgaacactttttcaggcgcataaattctcagttggtaacctttggggtgatttattcagtaattcaaattctatac |
27567475 |
T |
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| Q |
230 |
ttaaggcatgtttattctcagttcttatccacaacacttaacattat |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27567476 |
ctaaggcatgtttattctcagttcttatccacaacacttaacattat |
27567522 |
T |
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