View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0839_high_43 (Length: 246)

Name: NF0839_high_43
Description: NF0839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0839_high_43
NF0839_high_43
[»] chr3 (24 HSPs)
chr3 (31-193)||(6941995-6942154)
chr3 (34-193)||(6781774-6781930)
chr3 (34-196)||(6733730-6733889)
chr3 (31-193)||(6945327-6945486)
chr3 (31-188)||(7585935-7586089)
chr3 (31-193)||(6523297-6523456)
chr3 (31-188)||(6556529-6556683)
chr3 (57-193)||(6841408-6841541)
chr3 (57-163)||(8588009-8588115)
chr3 (72-165)||(8570804-8570897)
chr3 (34-109)||(8452775-8452850)
chr3 (31-109)||(6528828-6528906)
chr3 (33-194)||(6481799-6481957)
chr3 (63-161)||(6257287-6257385)
chr3 (63-161)||(6898173-6898271)
chr3 (36-94)||(8469715-8469773)
chr3 (72-157)||(6243406-6243491)
chr3 (125-168)||(6530427-6530470)
chr3 (63-161)||(6723925-6724023)
chr3 (64-165)||(6450639-6450740)
chr3 (63-146)||(6593199-6593282)
chr3 (78-144)||(5262040-5262106)
chr3 (64-165)||(6730567-6730668)
chr3 (72-161)||(6851133-6851222)
[»] scaffold1643 (1 HSPs)
scaffold1643 (30-193)||(229-389)
[»] scaffold2053 (1 HSPs)
scaffold2053 (31-168)||(70-207)
[»] scaffold0425 (1 HSPs)
scaffold0425 (30-188)||(9576-9731)
[»] chr7 (1 HSPs)
chr7 (64-115)||(6575170-6575221)
[»] scaffold0958 (1 HSPs)
scaffold0958 (75-160)||(1653-1738)


Alignment Details
Target: chr3 (Bit Score: 105; Significance: 1e-52; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 31 - 193
Target Start/End: Complemental strand, 6942154 - 6941995
Alignment:
Q  31 tacgttgctataattctcttggttacctttcaataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgca 130  Q
    |||||||||||||||| |||  |   ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  6942154 tacgttgctataattccctttctacactttcaataaaaggatggcactcctcctccttgcctttttcactacacttgttcaccaaacttcattatctgta 6942055  T
Q  131 tttgtacgattgtccagagctggaatcgtttccaatggcgggtggttttccttccaacatgag 193  Q
    | ||||||||||||||||||||||||||||||||||   ||||||||| ||||||||| ||||    
T  6942054 tctgtacgattgtccagagctggaatcgtttccaat---gggtggtttgccttccaacttgag 6941995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 34 - 193
Target Start/End: Original strand, 6781774 - 6781930
Alignment:
Q  34 gttgctataattctcttggttacctttcaataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcattt 133  Q
    |||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||||||| || |    
T  6781774 gttgttataattctcttggtgatctttcaataaaaggatggcactcctcctccttgcctttggaactacacttgttcaccaaacttcattatctgtatct 6781873  T
Q  134 gtacgattgtccagagctggaatcgtttccaatggcgggtggttttccttccaacatgag 193  Q
    |||||||||||||||||||||||||||||||||   ||||||||| ||||||||| ||||    
T  6781874 gtacgattgtccagagctggaatcgtttccaat---gggtggtttgccttccaacttgag 6781930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 6733889 - 6733730
Alignment:
Q  34 gttgctataattctcttggttacctttcaataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcattt 133  Q
    |||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||||||||||  |||    
T  6733889 gttgttataattctcttggtgatctttcaataaaaggatggcactcctcctccttgcctttggaactacacttgttcaccaaacttcattatctgtgttt 6733790  T
Q  134 gtacgattgtccagagctggaatcgtttccaatggcgggtggttttccttccaacatgagcct 196  Q
    ||  |||||||||||||||||||||||||||||   ||||||||| ||||||||| |||||||    
T  6733789 gtttgattgtccagagctggaatcgtttccaat---gggtggtttgccttccaacttgagcct 6733730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 31 - 193
Target Start/End: Complemental strand, 6945486 - 6945327
Alignment:
Q  31 tacgttgctataattctcttggttacctttcaataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgca 130  Q
    ||||||||||||||| |||||     |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  6945486 tacgttgctataattatcttgaaagactttcaataaaaggatggcattcctcctccttgcctttttcactacacttgttcaccaaacttcattatctgta 6945387  T
Q  131 tttgtacgattgtccagagctggaatcgtttccaatggcgggtggttttccttccaacatgag 193  Q
    | ||||||||||||||||||||||||| ||||||||   ||||||||| ||||||||| ||||    
T  6945386 tctgtacgattgtccagagctggaatcctttccaat---gggtggtttgccttccaacttgag 6945327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 188
Target Start/End: Complemental strand, 7586089 - 7585935
Alignment:
Q  31 tacgttgctataattctcttggttacctttcaataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgca 130  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||  |||  |  |||||     
T  7586089 tacgttgctataattctcttcgtgatctttcaataaaaggatggcactcctcctccttgcctttggaactacacttgttcaccagtcttagtgctctgcg 7585990  T
Q  131 tttgtacgattgtccagagctggaatcgtttccaatggcgggtggttttccttccaac 188  Q
    | ||||||||||||||||||||||||||||||||||   ||||||||| |||||||||    
T  7585989 tctgtacgattgtccagagctggaatcgtttccaat---gggtggtttgccttccaac 7585935  T

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Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 193
Target Start/End: Original strand, 6523297 - 6523456
Alignment:
Q  31 tacgttgctataattctcttggttacctttcaataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgca 130  Q
    ||||||||||||||| |||| || | |||||||||||||| |||  ||||||||||||||||||   |||||||||||| ||||  |||| || |||||     
T  6523297 tacgttgctataattttcttcgtgatctttcaataaaaggctggtgctcctcctccttgcctttggaactacacttgttcaccagtcttcgttctctgcg 6523396  T
Q  131 tttgtacgattgtccagagctggaatcgtttccaatggcgggtggttttccttccaacatgag 193  Q
    | ||||||||||||||||||||||||||||||||||   ||||||||| ||||||||| ||||    
T  6523397 tctgtacgattgtccagagctggaatcgtttccaat---gggtggtttgccttccaacttgag 6523456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 31 - 188
Target Start/End: Original strand, 6556529 - 6556683
Alignment:
Q  31 tacgttgctataattctcttggttacctttcaataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgca 130  Q
    ||||||||||||||| |||| || | |||||||||||||| |||  ||||||||||||||||||   |||||||||||| ||||||||||| | |||| |    
T  6556529 tacgttgctataattttcttcgtgatctttcaataaaaggctggtgctcctcctccttgcctttggaactacacttgttcaccaaacttcaatctctgta 6556628  T
Q  131 tttgtacgattgtccagagctggaatcgtttccaatggcgggtggttttccttccaac 188  Q
    | |||||||||||||||||||||||||  |||||||   ||||||||| |||||||||    
T  6556629 tctgtacgattgtccagagctggaatcccttccaat---gggtggtttgccttccaac 6556683  T

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Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 193
Target Start/End: Original strand, 6841408 - 6841541
Alignment:
Q  57 ctttcaataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcatttgtacgattgtccagagctggaat 156  Q
    ||||||||| ||||||||  ||||||||||||||||||   |||||||||||| ||||  |||| || |||| || || |||||||||||||||||||||    
T  6841408 ctttcaatagaaggatggggctcctcctccttgcctttggaactacacttgttcaccagtcttcgttctctgtatctggacgattgtccagagctggaat 6841507  T
Q  157 cgtttccaatggcgggtggttttccttccaacatgag 193  Q
    ||||||||||   ||||||||| ||||||||| ||||    
T  6841508 cgtttccaat---gggtggtttgccttccaacttgag 6841541  T

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Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 8588115 - 8588009
Alignment:
Q  57 ctttcaataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcatttgtacgattgtccagagctggaat 156  Q
    ||||||||||||||||||| ||||| ||||||||||||   |||||||||||| ||||| ||| ||||||| | ||||| || |||||||||| ||||||    
T  8588115 ctttcaataaaaggatggcgctcctactccttgcctttggaactacacttgttcaccaatcttgattatcttcgtttgtgcggttgtccagagttggaat 8588016  T
Q  157 cgtttcc 163  Q
    |||||||    
T  8588015 cgtttcc 8588009  T

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Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 8570804 - 8570897
Alignment:
Q  72 tggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcatttgtacgattgtccagagctggaatcgtttccaa 165  Q
    |||||||||||||||||||||||| | | ||||||||| ||||| |||||||||||  | |||| |||||||||| |||||||||| |||||||    
T  8570804 tggcactcctcctccttgccttttaccccacacttgttcaccaatcttcattatctagagttgtccgattgtccacagctggaatcatttccaa 8570897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 8452850 - 8452775
Alignment:
Q  34 gttgctataattctcttggttacctttcaataaaaggatggcactcctcctccttgcctttttcactacacttgtt 109  Q
    |||||||||||||||||||| | |||||||||| | |||||  ||||||||||||| |||||||||||||||||||    
T  8452850 gttgctataattctcttggtgaactttcaataacaagatggtgctcctcctccttgtctttttcactacacttgtt 8452775  T

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Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 6528828 - 6528906
Alignment:
Q  31 tacgttgctataattctcttggttacctttcaataaaaggatggcactcctcctccttgcctttttcactacacttgtt 109  Q
    |||||||||||||||||||| |    || |||||||||||||||||||||||||||||||||||   ||||||||||||    
T  6528828 tacgttgctataattctctttggagactatcaataaaaggatggcactcctcctccttgcctttggaactacacttgtt 6528906  T

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Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 6481799 - 6481957
Alignment:
Q  33 cgttgctataattctcttggttacctttcaataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcatt 132  Q
    ||||| |||||||||||| ||   |||||||||| ||| |||| ||||||||||||| | ||||||||| ||||||| ||||| || |||| |||  | |    
T  6481799 cgttgttataattctcttcgtacgctttcaataatagggtggcgctcctcctccttgtccttttcactatacttgttcaccaatctccattctctatact 6481898  T
Q  133 tgtacgattgtccagagctggaatcgtttccaatggcgggtggttttccttccaacatgagc 194  Q
    ||||| ||||||| ||| |||  || ||||||   | ||||||||| ||||||||| |||||    
T  6481899 tgtacaattgtccggagttggtttcatttcca---gagggtggtttgccttccaacttgagc 6481957  T

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Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 6257385 - 6257287
Alignment:
Q  63 ataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcatttgtacgattgtccagagctggaatcgttt 161  Q
    |||| ||| |||||||| || |||||||||||| ||||||||||||| ||||| ||| ||| |||    |||||||||||||||  |||||||||||||    
T  6257385 ataacaggttggcactcttcttccttgccttttgcactacacttgttcaccaatcttaattctctcgtgttgtacgattgtccatggctggaatcgttt 6257287  T

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Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 6898271 - 6898173
Alignment:
Q  63 ataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcatttgtacgattgtccagagctggaatcgttt 161  Q
    |||| ||| |||||||| ||||||||||| ||| |||| |||||||| ||||| ||||||| ||||   ||||||||| |||||  |||||||||||||    
T  6898271 ataacaggttggcactcttcctccttgccatttgcactgcacttgttcaccaatcttcattctctggtgttgtacgatagtccatggctggaatcgttt 6898173  T

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Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 8469773 - 8469715
Alignment:
Q  36 tgctataattctcttggttacctttcaataaaaggatggcactcctcctccttgccttt 94  Q
    ||||||| ||||||| || | |||||||||| |||||||||||||||||||||||||||    
T  8469773 tgctatagttctcttcgtgatctttcaataacaggatggcactcctcctccttgccttt 8469715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 6243491 - 6243406
Alignment:
Q  72 tggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcatttgtacgattgtccagagctggaatc 157  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||| ||| ||| |||    |||||||||||||||  |||||||||    
T  6243491 tggcactcttcctccttgccttttgcactacacttgttcaccaatcttaattctctcgtgttgtacgattgtccattgctggaatc 6243406  T

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Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 168
Target Start/End: Original strand, 6530427 - 6530470
Alignment:
Q  125 tctgcatttgtacgattgtccagagctggaatcgtttccaatgg 168  Q
    |||| |||||||||||||||||||||||||||| ||||||||||    
T  6530427 tctgtatttgtacgattgtccagagctggaatcctttccaatgg 6530470  T

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Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 161
Target Start/End: Original strand, 6723925 - 6724023
Alignment:
Q  63 ataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcatttgtacgattgtccagagctggaatcgttt 161  Q
    |||| ||| |||||||| ||||||||||||||| | ||||||||| | ||||| ||| ||| |||   ||||||||||||||||  |||||| ||||||    
T  6723925 ataacaggttggcactcttcctccttgccttttgctctacacttgctcaccaatcttaattctctcgttttgtacgattgtccactgctggagtcgttt 6724023  T

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Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 165
Target Start/End: Original strand, 6450639 - 6450740
Alignment:
Q  64 taaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcatttgtacgattgtccagagctggaatcgtttcc 163  Q
    ||||||| |||| |||||||||||| || ||| ||||||||||||| || || ||||| | | || ||||||  |||||  ||||||| |||||||||||    
T  6450639 taaaaggctggcgctcctcctcctttccctttgcactacacttgttcacaaatcttcactctttgtatttgtctgattgcacagagctagaatcgtttcc 6450738  T
Q  164 aa 165  Q
    ||    
T  6450739 aa 6450740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 6593199 - 6593282
Alignment:
Q  63 ataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcatttgtacgattgtcca 146  Q
    |||| ||| |||||||| ||||||||||||||| | ||||||||| | ||||| ||| ||| |||   ||||||||||||||||    
T  6593199 ataacaggttggcactcttcctccttgccttttgctctacacttgctcaccaatcttaattctctcgttttgtacgattgtcca 6593282  T

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Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 5262106 - 5262040
Alignment:
Q  78 tcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcatttgtacgattgtc 144  Q
    ||||| |||||||||||| ||||  ||||||| ||||| ||||||| |||  |||||||||||||||    
T  5262106 tcctcatccttgccttttgcactgaacttgttcaccaatcttcattctctagatttgtacgattgtc 5262040  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 165
Target Start/End: Original strand, 6730567 - 6730668
Alignment:
Q  64 taaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcatttgtacgattgtccagagctggaatcgtttcc 163  Q
    ||||||| |||| |||||||||||| || ||| |||||||||| || || || ||||| | | || ||||||  |||||  ||||||| |||||||||||    
T  6730567 taaaaggttggcgctcctcctcctttccctttgcactacacttattcacaaatcttcactctttgtatttgtctgattgcacagagctagaatcgtttcc 6730666  T
Q  164 aa 165  Q
    ||    
T  6730667 aa 6730668  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 161
Target Start/End: Original strand, 6851133 - 6851222
Alignment:
Q  72 tggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcatttgtacgattgtccagagctggaatcgttt 161  Q
    ||||| || ||||||||||||||| ||| ||| ||||| | ||| ||| ||| |||   ||||||||||||||||  |||||||||||||    
T  6851133 tggcattcttcctccttgccttttgcaccacaattgttcaacaatcttgattctcttgttttgtacgattgtccatggctggaatcgttt 6851222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1643 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold1643
Description:

Target: scaffold1643; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 193
Target Start/End: Complemental strand, 389 - 229
Alignment:
Q  30 ctacgttgctataattctcttggttacctttcaataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgc 129  Q
    |||| |||||||||||||||| |    || |||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||||||||||     
T  389 ctacattgctataattctctttggagactatcaataaaaggatggcactcctcctccttgcctttggaactacacttgttcaccaaacttcattatctgt 290  T
Q  130 atttgtacgattgtccagagctggaatcgtttccaatggcgggtggttttccttccaacatgag 193  Q
    || || |||||||||||||||||||||||||||||||   ||||||||| ||||||||| ||||    
T  289 atctggacgattgtccagagctggaatcgtttccaat---gggtggtttgccttccaacttgag 229  T

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Target: scaffold2053 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold2053
Description:

Target: scaffold2053; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 70 - 207
Alignment:
Q  31 tacgttgctataattctcttggttacctttcaataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgca 130  Q
    |||||||||||||||||||| |    || |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||| |    
T  70 tacgttgctataattctctttggagactatcaataaaaggatggcactcatcctcgttgcctttttcactacacttgttcaccaaacttcattctctgta 169  T
Q  131 tttgtacgattgtccagagctggaatcgtttccaatgg 168  Q
    | | |||||||||||||||||||||| ||||| |||||    
T  170 tctatacgattgtccagagctggaatggtttcaaatgg 207  T

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Target: scaffold0425 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 30 - 188
Target Start/End: Original strand, 9576 - 9731
Alignment:
Q  30 ctacgttgctataattctcttggttacctttcaataaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgc 129  Q
    ||||||||||||||||||||| |    || |||||| |||||||||| |||||||||||||||||   |||||||||||| ||||| ||| ||||||||     
T  9576 ctacgttgctataattctctttggagactatcaatacaaggatggcattcctcctccttgcctttggaactacacttgttcaccaatcttaattatctgt 9675  T
Q  130 atttgtacgattgtccagagctggaatcgtttccaatggcgggtggttttccttccaac 188  Q
    || ||||||||||||||||||||||||||||||||||   ||||||||| |||||||||    
T  9676 atctgtacgattgtccagagctggaatcgtttccaat---gggtggtttgccttccaac 9731  T

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Target: chr7 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 6575170 - 6575221
Alignment:
Q  64 taaaaggatggcactcctcctccttgcctttttcactacacttgttgaccaa 115  Q
    ||||||| ||||| |||||||  ||||||||||||||||||||||| |||||    
T  6575170 taaaaggttggcaatcctccttgttgcctttttcactacacttgttcaccaa 6575221  T

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Target: scaffold0958 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0958
Description:

Target: scaffold0958; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 1653 - 1738
Alignment:
Q  75 cactcctcctccttgcctttttcactacacttgttgaccaaacttcattatctgcatttgtacgattgtccagagctggaatcgtt 160  Q
    ||||| ||||||||||||||| | ||||||||||| || || | |||||||||  | || | |||||||||| | |||||||||||    
T  1653 cactcttcctccttgccttttacgctacacttgttcacaaatcatcattatctagagttttccgattgtccataactggaatcgtt 1738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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