View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0840_low_20 (Length: 325)

Name: NF0840_low_20
Description: NF0840
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0840_low_20
NF0840_low_20
[»] chr5 (36 HSPs)
chr5 (109-151)||(11768014-11768056)
chr5 (109-151)||(1774307-1774349)
chr5 (109-151)||(26660435-26660477)
chr5 (109-151)||(26932027-26932069)
chr5 (109-151)||(36713202-36713244)
chr5 (110-151)||(19127129-19127170)
chr5 (162-225)||(31708370-31708432)
chr5 (109-151)||(12661971-12662013)
chr5 (109-151)||(14323992-14324034)
chr5 (109-151)||(18449266-18449308)
chr5 (162-231)||(22098255-22098324)
chr5 (109-151)||(23991158-23991200)
chr5 (109-151)||(34381017-34381059)
chr5 (162-232)||(39595272-39595341)
chr5 (109-151)||(39595277-39595319)
chr5 (162-231)||(6529019-6529087)
chr5 (162-211)||(32873171-32873220)
chr5 (162-211)||(36416084-36416133)
chr5 (109-148)||(40223809-40223848)
chr5 (160-226)||(7077350-7077415)
chr5 (109-151)||(12718404-12718446)
chr5 (109-151)||(12779630-12779672)
chr5 (162-232)||(34381012-34381081)
chr5 (162-231)||(2456026-2456094)
chr5 (162-231)||(11880990-11881058)
chr5 (162-226)||(18695318-18695382)
chr5 (162-231)||(19376135-19376203)
chr5 (162-211)||(22647583-22647632)
chr5 (162-211)||(33393634-33393683)
chr5 (162-231)||(42909719-42909787)
chr5 (163-231)||(6046314-6046381)
chr5 (1-44)||(11767903-11767949)
chr5 (115-151)||(12910789-12910825)
chr5 (164-211)||(14321976-14322024)
chr5 (162-226)||(19271859-19271922)
chr5 (162-226)||(41192587-41192650)
[»] chr2 (35 HSPs)
chr2 (109-151)||(11229345-11229387)
chr2 (161-231)||(11980650-11980719)
chr2 (162-231)||(31635813-31635881)
chr2 (162-226)||(14797658-14797721)
chr2 (162-210)||(16754396-16754444)
chr2 (108-151)||(4738595-4738638)
chr2 (108-151)||(33296094-33296137)
chr2 (109-151)||(5455477-5455519)
chr2 (162-232)||(34249580-34249649)
chr2 (157-225)||(6336247-6336315)
chr2 (162-231)||(6639475-6639543)
chr2 (162-231)||(7497994-7498062)
chr2 (162-230)||(39737690-39737757)
chr2 (109-151)||(5067670-5067712)
chr2 (162-231)||(14328381-14328450)
chr2 (162-232)||(23880095-23880164)
chr2 (109-151)||(30856812-30856854)
chr2 (109-151)||(36435686-36435728)
chr2 (162-231)||(41868372-41868441)
chr2 (162-231)||(1889147-1889215)
chr2 (162-231)||(4723566-4723634)
chr2 (1-45)||(11229234-11229281)
chr2 (162-231)||(23358582-23358650)
chr2 (162-231)||(30339993-30340061)
chr2 (162-231)||(32688547-32688615)
chr2 (1-45)||(43725316-43725363)
chr2 (162-210)||(1052519-1052567)
chr2 (162-226)||(6851667-6851730)
chr2 (162-226)||(13466083-13466146)
chr2 (162-210)||(27540015-27540063)
chr2 (162-210)||(30413749-30413797)
chr2 (162-230)||(31296849-31296916)
chr2 (162-226)||(33857217-33857280)
chr2 (162-210)||(43356289-43356337)
chr2 (160-231)||(45259287-45259358)
[»] chr8 (39 HSPs)
chr8 (162-231)||(9550410-9550478)
chr8 (1-45)||(24946113-24946157)
chr8 (109-151)||(11223883-11223925)
chr8 (109-151)||(22852863-22852905)
chr8 (162-231)||(16808581-16808649)
chr8 (162-231)||(25830248-25830317)
chr8 (109-151)||(27836185-27836227)
chr8 (162-224)||(40719653-40719714)
chr8 (109-151)||(45101401-45101443)
chr8 (162-231)||(9048319-9048387)
chr8 (162-231)||(12659052-12659120)
chr8 (162-231)||(22767132-22767200)
chr8 (162-211)||(31806299-31806348)
chr8 (162-231)||(35818937-35819005)
chr8 (162-211)||(39153704-39153753)
chr8 (162-226)||(29509266-29509329)
chr8 (163-231)||(34494641-34494708)
chr8 (112-147)||(7559327-7559362)
chr8 (112-151)||(7596918-7596957)
chr8 (112-151)||(21273737-21273776)
chr8 (162-211)||(67182-67232)
chr8 (109-151)||(7279979-7280021)
chr8 (162-232)||(8888252-8888321)
chr8 (109-151)||(11879514-11879556)
chr8 (109-151)||(11896930-11896972)
chr8 (109-151)||(32174959-32175001)
chr8 (162-231)||(40604708-40604775)
chr8 (109-151)||(40842019-40842061)
chr8 (159-209)||(43602447-43602497)
chr8 (165-226)||(6105444-6105504)
chr8 (162-231)||(12959938-12960006)
chr8 (162-226)||(13106477-13106541)
chr8 (162-211)||(20473779-20473828)
chr8 (162-231)||(21418595-21418663)
chr8 (162-211)||(30608730-30608779)
chr8 (162-211)||(35937534-35937583)
chr8 (162-231)||(45101396-45101464)
chr8 (162-226)||(7376506-7376569)
chr8 (162-226)||(34970207-34970270)
[»] chr4 (48 HSPs)
chr4 (162-231)||(12241058-12241126)
chr4 (162-231)||(33820339-33820407)
chr4 (162-225)||(1562545-1562607)
chr4 (109-151)||(52392249-52392291)
chr4 (110-151)||(15596401-15596442)
chr4 (162-231)||(25523201-25523269)
chr4 (162-231)||(39881033-39881101)
chr4 (162-226)||(55595949-55596012)
chr4 (109-151)||(1031760-1031802)
chr4 (162-212)||(3968885-3968935)
chr4 (109-151)||(4896524-4896566)
chr4 (109-151)||(6953412-6953454)
chr4 (109-151)||(46566934-46566976)
chr4 (162-231)||(9472516-9472584)
chr4 (162-211)||(25725716-25725765)
chr4 (162-231)||(46794504-46794572)
chr4 (162-231)||(53357080-53357148)
chr4 (162-231)||(53583131-53583199)
chr4 (161-225)||(149296-149359)
chr4 (111-151)||(11064115-11064155)
chr4 (162-226)||(29513704-29513767)
chr4 (162-226)||(36812411-36812474)
chr4 (162-210)||(47998594-47998642)
chr4 (162-226)||(49424828-49424891)
chr4 (162-226)||(51224846-51224909)
chr4 (162-226)||(56025256-56025319)
chr4 (120-151)||(23347780-23347811)
chr4 (112-151)||(34116567-34116606)
chr4 (156-226)||(42815398-42815468)
chr4 (162-225)||(43358613-43358675)
chr4 (108-151)||(51389097-51389140)
chr4 (109-151)||(46794525-46794567)
chr4 (109-151)||(51039140-51039182)
chr4 (109-151)||(51717306-51717348)
chr4 (162-231)||(4577557-4577625)
chr4 (162-231)||(18874925-18874992)
chr4 (162-231)||(22920274-22920342)
chr4 (162-231)||(22971457-22971525)
chr4 (162-231)||(40755921-40755989)
chr4 (162-231)||(45286118-45286186)
chr4 (162-231)||(48722069-48722137)
chr4 (162-231)||(49768872-49768940)
chr4 (162-211)||(52891872-52891921)
chr4 (162-231)||(55996422-55996490)
chr4 (162-226)||(14090058-14090121)
chr4 (111-151)||(24772676-24772716)
chr4 (123-151)||(33986161-33986189)
chr4 (162-226)||(45277089-45277152)
[»] chr3 (46 HSPs)
chr3 (164-231)||(47988488-47988554)
chr3 (164-231)||(47997775-47997841)
chr3 (164-231)||(48007062-48007128)
chr3 (109-151)||(20380913-20380955)
chr3 (162-211)||(11335324-11335373)
chr3 (162-231)||(31017397-31017465)
chr3 (162-211)||(40159860-40159909)
chr3 (109-226)||(41877635-41877751)
chr3 (162-231)||(51032627-51032695)
chr3 (111-151)||(24537224-24537264)
chr3 (109-151)||(7294123-7294166)
chr3 (156-231)||(26279878-26279952)
chr3 (112-151)||(48945852-48945891)
chr3 (109-151)||(30796638-30796680)
chr3 (109-151)||(34733315-34733357)
chr3 (165-231)||(48649583-48649648)
chr3 (109-151)||(51464296-51464338)
chr3 (162-231)||(462404-462472)
chr3 (109-150)||(11173464-11173505)
chr3 (162-231)||(37303077-37303145)
chr3 (162-226)||(37894250-37894314)
chr3 (162-226)||(7949791-7949854)
chr3 (162-226)||(8066355-8066418)
chr3 (112-151)||(18169162-18169201)
chr3 (160-211)||(48179075-48179126)
chr3 (109-151)||(108436-108478)
chr3 (109-151)||(1901950-1901992)
chr3 (109-151)||(1911396-1911438)
chr3 (109-151)||(5398923-5398965)
chr3 (109-151)||(22813077-22813119)
chr3 (109-151)||(26279889-26279931)
chr3 (162-224)||(32008033-32008094)
chr3 (109-151)||(35272032-35272074)
chr3 (109-151)||(51672868-51672910)
chr3 (162-231)||(7217-7285)
chr3 (162-211)||(22813072-22813121)
chr3 (162-226)||(29573363-29573427)
chr3 (162-231)||(30805606-30805674)
chr3 (162-231)||(34271493-34271561)
chr3 (162-231)||(36869840-36869908)
chr3 (162-231)||(37303383-37303451)
chr3 (162-211)||(39604268-39604317)
chr3 (165-226)||(40478295-40478355)
chr3 (162-231)||(43900760-43900828)
chr3 (162-231)||(44334804-44334872)
chr3 (162-226)||(47056534-47056597)
[»] chr7 (39 HSPs)
chr7 (109-151)||(45607029-45607071)
chr7 (162-226)||(9055267-9055330)
chr7 (109-151)||(156005-156048)
chr7 (109-144)||(47192939-47192974)
chr7 (165-211)||(42640846-42640892)
chr7 (109-151)||(48866954-48866996)
chr7 (162-231)||(5378627-5378695)
chr7 (162-231)||(19426580-19426648)
chr7 (162-231)||(30538626-30538694)
chr7 (162-231)||(33212042-33212110)
chr7 (110-151)||(33223554-33223595)
chr7 (110-151)||(42663089-42663130)
chr7 (163-231)||(34349030-34349097)
chr7 (163-210)||(2756952-2756999)
chr7 (120-151)||(25887599-25887630)
chr7 (109-151)||(19426585-19426627)
chr7 (109-151)||(28596911-28596953)
chr7 (109-151)||(28824508-28824550)
chr7 (162-231)||(30769664-30769730)
chr7 (109-151)||(40842410-40842452)
chr7 (162-231)||(41018663-41018732)
chr7 (109-151)||(41966337-41966379)
chr7 (162-231)||(42584802-42584871)
chr7 (165-226)||(1789994-1790054)
chr7 (109-150)||(10591161-10591202)
chr7 (162-211)||(21037256-21037305)
chr7 (162-231)||(24700121-24700189)
chr7 (1-45)||(25887694-25887741)
chr7 (162-231)||(27704435-27704503)
chr7 (162-231)||(28548224-28548292)
chr7 (162-211)||(28824503-28824552)
chr7 (162-231)||(33684680-33684748)
chr7 (162-211)||(42276091-42276140)
chr7 (162-211)||(42476567-42476616)
chr7 (162-231)||(48522156-48522224)
chr7 (163-231)||(2790178-2790245)
chr7 (162-226)||(20406541-20406604)
chr7 (162-210)||(27331050-27331098)
chr7 (162-226)||(42060656-42060719)
[»] chr1 (36 HSPs)
chr1 (162-232)||(50141937-50142006)
chr1 (162-211)||(18541073-18541122)
chr1 (162-226)||(27810255-27810318)
chr1 (162-225)||(50017432-50017494)
chr1 (109-151)||(31427981-31428023)
chr1 (109-151)||(50226903-50226945)
chr1 (162-211)||(3606116-3606165)
chr1 (162-223)||(8905728-8905788)
chr1 (162-231)||(12999825-12999893)
chr1 (168-225)||(51848886-51848942)
chr1 (163-206)||(15182610-15182653)
chr1 (162-225)||(49189217-49189279)
chr1 (162-211)||(33076119-33076169)
chr1 (109-151)||(49425743-49425784)
chr1 (162-231)||(1615036-1615104)
chr1 (162-211)||(9445108-9445157)
chr1 (162-211)||(12708090-12708139)
chr1 (162-211)||(12713544-12713593)
chr1 (162-211)||(12717635-12717684)
chr1 (162-231)||(25988987-25989055)
chr1 (162-231)||(28253015-28253083)
chr1 (1-45)||(30631758-30631805)
chr1 (162-231)||(31436820-31436888)
chr1 (1-45)||(35846232-35846279)
chr1 (162-231)||(36690575-36690643)
chr1 (162-231)||(36706676-36706744)
chr1 (162-231)||(39010814-39010882)
chr1 (162-231)||(44672033-44672101)
chr1 (162-231)||(45042261-45042329)
chr1 (162-231)||(49596235-49596303)
chr1 (162-231)||(51250278-51250346)
chr1 (119-151)||(5309074-5309106)
chr1 (162-226)||(18610773-18610836)
chr1 (115-151)||(45740574-45740610)
chr1 (111-151)||(46947986-46948026)
chr1 (110-150)||(52669793-52669833)
[»] chr6 (21 HSPs)
chr6 (162-227)||(17835612-17835676)
chr6 (162-225)||(3800564-3800626)
chr6 (162-232)||(8395342-8395411)
chr6 (162-211)||(8778894-8778943)
chr6 (162-231)||(19789079-19789147)
chr6 (162-231)||(29383557-29383625)
chr6 (162-226)||(25924872-25924935)
chr6 (162-226)||(28965848-28965911)
chr6 (156-231)||(11785349-11785423)
chr6 (162-232)||(26391285-26391356)
chr6 (112-151)||(32457279-32457318)
chr6 (109-151)||(6435041-6435083)
chr6 (109-151)||(9954553-9954595)
chr6 (165-231)||(14094914-14094979)
chr6 (165-231)||(21506339-21506404)
chr6 (162-231)||(28883749-28883819)
chr6 (109-151)||(29383562-29383604)
chr6 (162-231)||(9188947-9189015)
chr6 (162-211)||(15666795-15666844)
chr6 (1-45)||(24752342-24752389)
chr6 (162-231)||(32729889-32729957)
[»] scaffold0508 (1 HSPs)
scaffold0508 (112-151)||(11563-11602)
[»] scaffold0011 (1 HSPs)
scaffold0011 (109-151)||(219688-219730)
[»] scaffold0154 (1 HSPs)
scaffold0154 (162-231)||(4315-4383)
[»] scaffold0172 (1 HSPs)
scaffold0172 (162-226)||(16975-17038)
[»] scaffold0131 (1 HSPs)
scaffold0131 (112-151)||(15561-15600)
[»] scaffold0049 (1 HSPs)
scaffold0049 (161-226)||(72179-72241)
[»] scaffold0026 (1 HSPs)
scaffold0026 (109-151)||(113630-113672)
[»] scaffold0020 (1 HSPs)
scaffold0020 (162-211)||(155906-155955)
[»] scaffold0024 (1 HSPs)
scaffold0024 (162-210)||(60469-60517)
[»] scaffold0002 (1 HSPs)
scaffold0002 (111-151)||(6432-6472)


Alignment Details
Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 11768014 - 11768056
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11768014 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 11768056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 1774307 - 1774349
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  1774307 aagttgtcaagaagttgtcacaaagtagatgtacaaatatcat 1774349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 26660435 - 26660477
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  26660435 aagttgtcaagaagttgtcacaaaatggatgtacaaatatcat 26660477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 26932027 - 26932069
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  26932027 aagttgtcaagaagttgtcacaaaatggatgtacaaatatcat 26932069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 36713202 - 36713244
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  36713202 aagttgtcaagaagttgtcacaaagtggttgtacaaatatcat 36713244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 19127170 - 19127129
Alignment:
Q  110 agttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  19127170 agttgtcaagaagttgtcacaaagtggttgtacaaatatcat 19127129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 31708370 - 31708432
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactca 225  Q
    |||||||||||||||| |||| |||||  |||||||||||||||||||| || |||||||||||    
T  31708370 gagaaatgatatttgtacaaccattttataacaactttttgacaacttt-ctctctcatactca 31708432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 12661971 - 12662013
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| || |||||||||||||||||||||||||||||    
T  12661971 aagttgtcaaaaaattgtcacaaagtggatgtacaaatatcat 12662013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 14323992 - 14324034
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  14323992 aagttgtcaagaagttgtcacaaaatggatgtgcaaatatcat 14324034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 18449308 - 18449266
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||| || ||||||||||||||||||||||||||||||||    
T  18449308 aagttgttaaaaagttgtcacaaagtggatgtacaaatatcat 18449266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 22098255 - 22098324
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttt-tgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||| |||||||||| |||||||||| || |||||||||||| ||||    
T  22098255 gagaaatgatatttgtacaaccattttctaacaacttttgtgacaacttt-ctctctcatactcacattat 22098324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 23991158 - 23991200
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||||| |||||||||||||||||| ||||||||||||||    
T  23991158 aagttgtcaggaagttgtcacaaagtggttgtacaaatatcat 23991200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 34381059 - 34381017
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  34381059 aagttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 34381017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 39595272 - 39595341
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttatt 232  Q
    |||||||||||||||| |||| | |||   ||||||||||||||||||| || ||||||||||||||||||    
T  39595272 gagaaatgatatttgtacaaccactttgtgacaactttttgacaacttt-ctctctcatactcacgttatt 39595341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 39595319 - 39595277
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  39595319 aagttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 39595277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 6529019 - 6529087
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||  |||||| ||||| ||||||||||||||  | |||||||||||||||||    
T  6529019 gagaaatgatatttgtacaattattttctaacaattttttgacaacttt-ttctctcatactcacgttat 6529087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 32873220 - 32873171
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| | |||| |||||||||||||||||||||    
T  32873220 gagaaatgatatttgtacaaccaatttctaacaactttttgacaactttc 32873171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 36416133 - 36416084
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| |||||| ||||| |||||||||||||||    
T  36416133 gagaaatgatatttgtacaaccattttctaacaattttttgacaactttc 36416084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 148
Target Start/End: Original strand, 40223809 - 40223848
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatat 148  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  40223809 aagttgtcaaaaagttgtcacaaagtggttgtacaaatat 40223848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 7077415 - 7077350
Alignment:
Q  160 acgagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||||| |||| |||||   |||||||||||| |||||| || ||||||||||||    
T  7077415 acgagaaatgatatttgtacaaccattttgttacaactttttgataacttt-ctttctcatactcac 7077350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 12718404 - 12718446
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||    
T  12718404 aagttgtcaaaaagttgtcacaaattggttgtacaaatatcat 12718446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 12779630 - 12779672
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||    
T  12779630 aagttgtcaaaaagttgtcacaaattggttgtacaaatatcat 12779672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 34381012 - 34381081
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttatt 232  Q
    |||||||||||||||| |||| | |||   ||||||||||||||||||| || |||||||||||| |||||    
T  34381012 gagaaatgatatttgtacaaccactttgtgacaactttttgacaacttt-ctctctcatactcacattatt 34381081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 2456026 - 2456094
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||| | | |||| |||||  ||||| |||||||||||||| ||||||||||||||| ||||    
T  2456026 gagaaatgatatctatacaactattttataacaattttttgacaacttt-ctatctcatactcacattat 2456094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 11881058 - 11880990
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||  |||||  |||||||||| ||||||||| || |||||||||||| ||||    
T  11881058 gagaaatgatatttgtacaattattttttaacaacttttagacaacttt-ctctctcatactcacattat 11880990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 18695318 - 18695382
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttt-tgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||  |||||||||| |||||||||| || ||||||||||||    
T  18695318 gagaaatgatatttgtacaaccattttgtaacaacttttgtgacaacttt-ctctctcatactcac 18695382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 19376203 - 19376135
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | ||||  |||||||||||| |||||| || |||||||||||| ||||    
T  19376203 gagaaatgatatttgtacaaccactttctgacaactttttgataacttt-ctctctcatactcacattat 19376135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 22647632 - 22647583
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||  |||| | |||| |||||||||||||||||||||    
T  22647632 gagaaatgatatttgcacaaccaatttctaacaactttttgacaactttc 22647583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 33393634 - 33393683
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| ||||||  |||||||||| |||||||||    
T  33393634 gagaaatgatatttgtacaaccattttctcacaactttttaacaactttc 33393683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 42909719 - 42909787
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    ||||||| |||||||| |||| | ||||  ||||||||||||||||||| || |||||||||||| ||||    
T  42909719 gagaaattatatttgtacaaccactttctcacaactttttgacaacttt-ctttctcatactcacattat 42909787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 6046314 - 6046381
Alignment:
Q  163 agaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||| |||||||  |||| | |||| |||||||||||||||||||| || |||||||||||| ||||    
T  6046314 agaaattatatttgaacaaccaatttctaacaactttttgacaacttt-ctctctcatactcacattat 6046381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11767903 - 11767949
Alignment:
Q  1 tttagacaacttttggtgcaactt---ttttctcacttttcattggt 44  Q
    ||||||||||||||||| ||||||   ||||||||||||||||||||    
T  11767903 tttagacaacttttggtacaacttcttttttctcacttttcattggt 11767949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 12910825 - 12910789
Alignment:
Q  115 tcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  12910825 tcaaaaagttgtcacaaagtggttgtacaaatatcat 12910789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 14322024 - 14321976
Alignment:
Q  164 gaaatgatatttgtccaacaattttcgaacaactttt-tgacaactttc 211  Q
    |||||||||||||| |||| |||||| |||||||||| |||||||||||    
T  14322024 gaaatgatatttgtacaaccattttctaacaacttttgtgacaactttc 14321976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 19271859 - 19271922
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||  |||||| ||| ||||||||| || ||||||||||||    
T  19271859 gagaaatgatatttgtacaaccattttgtaacaacgtttagacaacttt-ctctctcatactcac 19271922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 41192587 - 41192650
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||   |||| |||||||||||||| || ||||||||||||    
T  41192587 gagaaatgatatttgtacaactattttgctacaattttttgacaacttt-ctctctcatactcac 41192650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 11229345 - 11229387
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11229345 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 11229387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 11980650 - 11980719
Alignment:
Q  161 cgagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    ||||||||||||||||| |||| |||||| ||||||||||||||||||||  |||||||||||||| ||||    
T  11980650 cgagaaatgatatttgtacaaccattttctaacaactttttgacaacttt-ttatctcatactcacattat 11980719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 31635881 - 31635813
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||| || |||||||||||| ||||    
T  31635881 gagaaatgatatttgtacaaccattttctaacaactttttgacaacttt-ctctctcatactcacattat 31635813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 14797721 - 14797658
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| | |||| |||||||||||||||||||| || ||||||||||||    
T  14797721 gagaaatgatatttgtacaaccaatttctaacaactttttgacaacttt-ctctctcatactcac 14797658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 16754396 - 16754444
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaacttt 210  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  16754396 gagaaatgatatttatacaacaattttctaacaactttttgacaacttt 16754444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 4738595 - 4738638
Alignment:
Q  108 gaagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||    
T  4738595 gaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 4738638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 33296094 - 33296137
Alignment:
Q  108 gaagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||    
T  33296094 gaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 33296137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 5455477 - 5455519
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  5455477 aagttgtcaaaaggttgtcacaaagtggatgtacaaatatcat 5455519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 34249580 - 34249649
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttatt 232  Q
    |||||||||||||||| |||| | ||||  ||||||||||||||||||| || ||| ||||||||||||||    
T  34249580 gagaaatgatatttgtacaaccactttctcacaactttttgacaacttt-ctctcttatactcacgttatt 34249649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 6336247 - 6336315
Alignment:
Q  157 acaacgagaaatgatatttgtccaacaattttcgaacaactttt-tgacaactttcctatctcatactca 225  Q
    |||| |||||||||||||||| |||| |||||| |||||||||| |||||||||| || |||||||||||    
T  6336247 acaaagagaaatgatatttgtacaaccattttctaacaacttttgtgacaacttt-ctctctcatactca 6336315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 6639543 - 6639475
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    ||||||| |||||||| |||| |||||| ||||||||||| |||||||| || |||||||||||| ||||    
T  6639543 gagaaataatatttgtacaaccattttctaacaactttttaacaacttt-ctctctcatactcacattat 6639475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 7498062 - 7497994
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||   ||||||||||||||||||| || |||||||||||| ||||    
T  7498062 gagaaatgatatttgtacaaccattttattacaactttttgacaacttt-ctctctcatactcacattat 7497994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 39737757 - 39737690
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgtta 230  Q
    |||||||||||||||| |||| | |||| |||||||||| ||||||||| || ||||||||| ||||||    
T  39737757 gagaaatgatatttgtacaaccaatttctaacaacttttggacaacttt-ctctctcatacttacgtta 39737690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 5067670 - 5067712
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||    
T  5067670 aagttatcaaaaagttgtcacaaagtagatgtacaaatatcat 5067712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 14328381 - 14328450
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttt-tgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||| ||| ||||||||||| |||||||||| ||||||||||  | |||||||||||| ||||    
T  14328381 gagaaatgatatatgtacaacaattttctaacaacttttgtgacaacttt-ttctctcatactcacattat 14328450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 23880095 - 23880164
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttatt 232  Q
    |||||||||||||||| |||| | ||||  |||||||||||| |||||| || |||||||||||| |||||    
T  23880095 gagaaatgatatttgtacaaccactttctcacaactttttgataacttt-ctctctcatactcacattatt 23880164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 30856854 - 30856812
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||| | ||||||||||||||||| ||||||||||||||    
T  30856854 aagttgtctaaaagttgtcacaaagtggttgtacaaatatcat 30856812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 36435728 - 36435686
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||| || ||||||||||||||||| ||||||||||||||    
T  36435728 aagttgttaaaaagttgtcacaaagtggttgtacaaatatcat 36435686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 41868441 - 41868372
Alignment:
Q  162 gagaaatgatatttgtccaa-caattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| ||| || ||||  |||||||||||||||||||| || |||||||||||| ||||    
T  41868441 gagaaatgatatttgtacaatcatttttttaacaactttttgacaacttt-ctctctcatactcacattat 41868372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 1889147 - 1889215
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | ||||  |||| |||||||||||||| || |||||||||||| ||||    
T  1889147 gagaaatgatatttgtacaaccactttctgacaattttttgacaacttt-ctctctcatactcacattat 1889215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 4723566 - 4723634
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||| ||| |||| |||||  ||||||||||| |||||||| || |||||||||||| ||||    
T  4723566 gagaaatgatatatgtacaaccattttttaacaacttttttacaacttt-ctctctcatactcacattat 4723634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11229234 - 11229281
Alignment:
Q  1 tttagacaacttttggtgcaactt---ttttctcacttttcattggtc 45  Q
    ||||||||||||||||| ||||||   |||||||||||||||||||||    
T  11229234 tttagacaacttttggtacaacttcttttttctcacttttcattggtc 11229281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 23358650 - 23358582
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||| | | ||||||||  |||||||||| ||||||||| || |||||||||||| ||||    
T  23358650 gagaaatgatatttatactacaattttttaacaacttttagacaacttt-ctctctcatactcacattat 23358582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 30339993 - 30340061
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| ||||| | |||||||||  |||||||| || |||||||||||| ||||    
T  30339993 gagaaatgatatttgtacaaccatttttgtacaacttttgtacaacttt-ctctctcatactcacattat 30340061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 32688615 - 32688547
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | ||||  |||| |||||||||||||| || |||||||||||| ||||    
T  32688615 gagaaatgatatttgtacaaccactttctgacaattttttgacaacttt-ctctctcatactcacattat 32688547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43725363 - 43725316
Alignment:
Q  1 tttagacaacttttggtgcaactt---ttttctcacttttcattggtc 45  Q
    ||||||||||||||||| ||||||   |||||||||||||||||||||    
T  43725363 tttagacaacttttggtacaacttcttttttctcacttttcattggtc 43725316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 1052567 - 1052519
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaacttt 210  Q
    |||||||||||||||| |||| |||||  |||||||||| |||||||||    
T  1052567 gagaaatgatatttgtacaaccattttttaacaacttttagacaacttt 1052519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 6851730 - 6851667
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| || | |||||   ||||||||||||||||||| || ||||||||||||    
T  6851730 gagaaatgatatttgtacatctattttgctacaactttttgacaacttt-ctctctcatactcac 6851667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 13466146 - 13466083
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| | |||| ||||| ||||| |||||||| || ||||||||||||    
T  13466146 gagaaatgatatttgtacaaccaatttctaacaattttttaacaacttt-ctctctcatactcac 13466083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 27540015 - 27540063
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaacttt 210  Q
    ||||||| |||||||| ||||||||||   |||||||||||||||||||    
T  27540015 gagaaatcatatttgtacaacaattttgctacaactttttgacaacttt 27540063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 30413797 - 30413749
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaacttt 210  Q
    |||||||||||||||| |||| |||||   |||||||||||||||||||    
T  30413797 gagaaatgatatttgtacaaccattttgctacaactttttgacaacttt 30413749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 31296916 - 31296849
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgtta 230  Q
    |||||||||||||||| |||| |||||   ||||| |||||||||||||  | ||||||||||||||||    
T  31296916 gagaaatgatatttgtacaaccattttgtgacaacgttttgacaacttt-atctctcatactcacgtta 31296849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 33857217 - 33857280
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||   ||||| ||||| |||||||||||||| || ||||||||||||    
T  33857217 gagaaatgatatttgtacaatctttttctaacaattttttgacaacttt-ctctctcatactcac 33857280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 43356289 - 43356337
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaacttt 210  Q
    ||||| |||||||||| |||| | |||| ||||||||||||||||||||    
T  43356289 gagaattgatatttgtacaaccaatttctaacaactttttgacaacttt 43356337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 45259358 - 45259287
Alignment:
Q  160 acgagaaatgatatttgtccaacaattttcgaacaactttt-tgacaactttcctatctcatactcacgttat 231  Q
    |||| ||||||||||||| || | |||||| ||||| |||| ||||||||||  |||||||||||||||||||    
T  45259358 acgaaaaatgatatttgtacatccattttctaacaatttttgtgacaactttt-tatctcatactcacgttat 45259287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 9550478 - 9550410
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||||| || |||||||||||| ||||    
T  9550478 gagaaatgatatttgtccaatcattttctaacaactttttgacaacttt-ctctctcatactcacattat 9550410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24946157 - 24946113
Alignment:
Q  1 tttagacaacttttggtgcaacttttttctcacttttcattggtc 45  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  24946157 tttagacaacttttggtacaacttttttctcacttttcattggtc 24946113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 11223883 - 11223925
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  11223883 aagttgtcaagaagttgtcacaaaatggatgtacaaatatcat 11223925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 22852863 - 22852905
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  22852863 aagttgtcaagaagttgtcacaaagtggttgtacaaatatcat 22852905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 16808581 - 16808649
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    ||||| |||||||||  |||| |||||| |||||||||||||||||||| ||||||||||||||| ||||    
T  16808581 gagaattgatatttggacaaccattttctaacaactttttgacaacttt-ctatctcatactcacattat 16808649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 25830317 - 25830248
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttt-tgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||| |||||||||| |||||||||| || |||||||||||| ||||    
T  25830317 gagaaatgatatttgtacaaccattttctaacaacttttgtgacaacttt-ctctctcatactcacattat 25830248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 27836227 - 27836185
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  27836227 aagttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 27836185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 40719714 - 40719653
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactc 224  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||||| || ||||||||||    
T  40719714 gagaaatgatatttgtacaaccattttctaacaaccttttgacaacttt-ctttctcatactc 40719653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 45101443 - 45101401
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  45101443 aagttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 45101401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 9048387 - 9048319
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    ||||||||||||||||  ||| |||||| |||||||||||||||| ||| || |||||||||||| ||||    
T  9048387 gagaaatgatatttgtataaccattttctaacaactttttgacaa-ttttctctctcatactcacattat 9048319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 12659052 - 12659120
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | |||  |||||||||||||||||||| || |||||||||||| ||||    
T  12659052 gagaaatgatatttgtacaaccaatttttaacaactttttgacaacttt-ctctctcatactcacattat 12659120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 22767132 - 22767200
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| ||||||  ||||||||||||||| ||| || |||||||||||| ||||    
T  22767132 gagaaatgatatttgtacaaccattttctcacaactttttgacaa-ttttctctctcatactcacattat 22767200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 31806299 - 31806348
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| |||||| ||||| |||||||||||||||    
T  31806299 gagaaatgatatttgtacaaccattttctaacaattttttgacaactttc 31806348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 35818937 - 35819005
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||  |||| |||||| ||||| |||||||||||||| || |||||||||||| ||||    
T  35818937 gagaaatgatatttgcacaaccattttctaacaattttttgacaacttt-ctctctcatactcacattat 35819005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 39153753 - 39153704
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| | ||||||||| ||||| |||||||||||||||    
T  39153753 gagaaatgatatttgtaccacaattttctaacaattttttgacaactttc 39153704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 29509266 - 29509329
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||   ||||||||||||||||||| || ||||||||||||    
T  29509266 gagaaatgatatttgtacaaccattttgctacaactttttgacaacttt-ctctctcatactcac 29509329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 34494708 - 34494641
Alignment:
Q  163 agaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    ||||||||||||||| |||| |||||| ||||| ||||||| || ||| || |||||||||||||||||    
T  34494708 agaaatgatatttgtacaactattttctaacaattttttga-aaattttctctctcatactcacgttat 34494641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 7559362 - 7559327
Alignment:
Q  112 ttgtcaagaagttgtcacaaagtggatgtacaaata 147  Q
    ||||||||||||||||||||||||| ||||||||||    
T  7559362 ttgtcaagaagttgtcacaaagtggttgtacaaata 7559327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 151
Target Start/End: Original strand, 7596918 - 7596957
Alignment:
Q  112 ttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  7596918 ttgtcaagaagttgtcacaaagtgattgtacaaatatcat 7596957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 151
Target Start/End: Original strand, 21273737 - 21273776
Alignment:
Q  112 ttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  21273737 ttgtcaagaagttgtcacaaaatggttgtacaaatatcat 21273776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 67232 - 67182
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttt-tgacaactttc 211  Q
    |||||||||||||||| |||| |||||| |||||||||| |||||||||||    
T  67232 gagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttc 67182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 7279979 - 7280021
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||| || | ||||||||||||||||||||||||||||||    
T  7279979 aagttgttaaaatgttgtcacaaagtggatgtacaaatatcat 7280021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 8888252 - 8888321
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttatt 232  Q
    |||||||||||||||| | || |||||  |||||||||  ||||||||| || ||||||||||||||||||    
T  8888252 gagaaatgatatttgtacgaccattttgcaacaactttcagacaacttt-ctctctcatactcacgttatt 8888321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 11879514 - 11879556
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| |||||||||||||||||| ||||| |||||||    
T  11879514 aagttgtcaaaaagttgtcacaaagtggacgtacatatatcat 11879556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 11896930 - 11896972
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| |||||||||||||||||| ||||| |||||||    
T  11896930 aagttgtcaaaaagttgtcacaaagtggacgtacatatatcat 11896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 32175001 - 32174959
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| || |||||||||||||||||||| ||||||||    
T  32175001 aagttgtcaaaaaattgtcacaaagtggatgtacgaatatcat 32174959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 40604775 - 40604708
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||| ||| |||||||||||  ||||||||||||||| |||  | ||||||||| |||||||    
T  40604775 gagaaatgatatctgtacaacaattttctgacaactttttgacaatttt--tctctcatacttacgttat 40604708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 40842061 - 40842019
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||    
T  40842061 aagttgtcaaaaagttatcacaaagtggttgtacaaatatcat 40842019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 43602497 - 43602447
Alignment:
Q  159 aacgagaaatgatatttgtccaacaattttcgaacaactttttgacaactt 209  Q
    ||||||||||||||||||| |||| |||||   ||||||||||||||||||    
T  43602497 aacgagaaatgatatttgtacaaccattttgctacaactttttgacaactt 43602447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 6105504 - 6105444
Alignment:
Q  165 aaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    ||||||||||||| |||| |||||   ||||||||||||||||||| || ||||||||||||    
T  6105504 aaatgatatttgtacaaccatttttttacaactttttgacaacttt-ctctctcatactcac 6105444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 12959938 - 12960006
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||  |||| | |||| ||||| |||||||||||||| || |||||||||||| ||||    
T  12959938 gagaaatgatatttgcacaaccaatttctaacaattttttgacaacttt-ctttctcatactcacattat 12960006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 13106477 - 13106541
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaac-tttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||  |||| ||||| | ||||| |||||||||||||| |||||||||||||||    
T  13106477 gagaaatgatatttgaacaaccatttttggacaacttttttgacaacttt-ctatctcatactcac 13106541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 20473779 - 20473828
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| |||||  ||||| |||||||||||||||    
T  20473779 gagaaatgatatttgtacaaccattttataacaattttttgacaactttc 20473828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 21418663 - 21418595
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | ||||  ||||| ||||||||||||| || |||||||||||| ||||    
T  21418663 gagaaatgatatttgtacaaccactttctgacaaccttttgacaacttt-ctctctcatactcacattat 21418595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 30608779 - 30608730
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| ||| ||||||  ||||||||||||| |||||||    
T  30608779 gagaaatgatatttgtacaataattttttaacaactttttgataactttc 30608730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 35937583 - 35937534
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| |||||  |||||||||| ||||||||||    
T  35937583 gagaaatgatatttgtacaaccattttgtaacaacttttggacaactttc 35937534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 45101396 - 45101464
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | |||   ||||||||||||||||||| || |||||||||||| ||||    
T  45101396 gagaaatgatatttgtacaaccactttgtgacaactttttgacaacttt-ctctctcatactcacattat 45101464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 7376506 - 7376569
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| | |||| ||||||||||  |||||||| || ||||||||||||    
T  7376506 gagaaatgatatttgtacaaccaatttctaacaacttttgaacaacttt-ctctctcatactcac 7376569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 34970207 - 34970270
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||   ||||  |||||||||||||||||||| || ||||||||||||    
T  34970207 gagaaatgatatttgtacaatccttttgtaacaactttttgacaacttt-ctctctcatactcac 34970270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 12241058 - 12241126
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||| || |||||||||||| ||||    
T  12241058 gagaaatgatatttgtacaactattttctaacaactttttgacaacttt-ctctctcatactcacattat 12241126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 33820407 - 33820339
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||| || |||||||||||| ||||    
T  33820407 gagaaatgatatttgtacaactattttctaacaactttttgacaacttt-ctctctcatactcacattat 33820339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 1562607 - 1562545
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactca 225  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||| || |||||||||||    
T  1562607 gagaaatgatatttgtacaaccattttctaacaactttttgacaacttt-ctctctcatactca 1562545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 52392249 - 52392291
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  52392249 aagttgtcaaaaagttgtcacaaagtggatgtacaaatatcat 52392291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 15596442 - 15596401
Alignment:
Q  110 agttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  15596442 agttgtcaagaagttgtcacaaagtggttgtacaaatatcat 15596401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 25523269 - 25523201
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| ||||||  ||||||||||||||||||| || |||||||||||| ||||    
T  25523269 gagaaatgatatttgtacaactattttctcacaactttttgacaacttt-ctctctcatactcacattat 25523201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 39881101 - 39881033
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||  |||||| |||||||||||||||||||| || |||||||||||| ||||    
T  39881101 gagaaatgatatttgtacaatcattttctaacaactttttgacaacttt-ctctctcatactcacattat 39881033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 55595949 - 55596012
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| | |||| |||||||||||||||||||| || ||||||||||||    
T  55595949 gagaaatgatatttgtacaaccaatttctaacaactttttgacaacttt-ctctctcatactcac 55596012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 1031802 - 1031760
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||||||||| ||||||||||| ||||||||||||||    
T  1031802 aagttgtcaagaagttatcacaaagtggttgtacaaatatcat 1031760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 3968885 - 3968935
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcc 212  Q
    |||||||||||||||| |||| |||||| |||||||||||||||| |||||    
T  3968885 gagaaatgatatttgtacaaccattttctaacaactttttgacaattttcc 3968935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 4896524 - 4896566
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  4896524 aagttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 4896566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 6953412 - 6953454
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||| || ||||||||||||||||||||||||||||||||    
T  6953412 aagttgttaaaaagttgtcacaaagtggatgtacaaatatcat 6953454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 46566976 - 46566934
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||| | ||||||||||||||||||||||||||||||||    
T  46566976 aagttgtctaaaagttgtcacaaagtggatgtacaaatatcat 46566934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 9472584 - 9472516
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||| || || |||||||||||||| || |||||||||||| ||||    
T  9472584 gagaaatgatatttgtacaactattttctaataattttttgacaacttt-ctctctcatactcacattat 9472516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 25725765 - 25725716
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| | |||| |||||||||||||||||||||    
T  25725765 gagaaatgatatttgtacaaccactttctaacaactttttgacaactttc 25725716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 46794572 - 46794504
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | ||||  ||||||||||||||||||| || |||||||||||| ||||    
T  46794572 gagaaatgatatttgtacaaccactttctgacaactttttgacaacttt-ctctctcatactcacattat 46794504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 53357148 - 53357080
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    ||||||||||||||||  ||| |||||| ||||| |||||||||||||| || |||||||||||| ||||    
T  53357148 gagaaatgatatttgtataactattttctaacaattttttgacaacttt-ctctctcatactcacattat 53357080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 53583199 - 53583131
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | ||||  ||||||||||||||||||| || |||||||||||| ||||    
T  53583199 gagaaatgatatttgtacaaccactttctcacaactttttgacaacttt-ctctctcatactcacattat 53583131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 149359 - 149296
Alignment:
Q  161 cgagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactca 225  Q
    ||||||||||||||||| |||| | |||| ||||| |||||||||||||| || |||||||||||    
T  149359 cgagaaatgatatttgtacaaccaatttctaacaattttttgacaacttt-ctctctcatactca 149296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 11064115 - 11064155
Alignment:
Q  111 gttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||| ||||||||||||||||| ||||||||||||||    
T  11064115 gttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 11064155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 29513767 - 29513704
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||   ||||||||||||||||||| || ||||||||||||    
T  29513767 gagaaatgatatttgtacaaccattttgctacaactttttgacaacttt-ctctctcatactcac 29513704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 36812474 - 36812411
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| | |||| |||||||||| ||||||||| || ||||||||||||    
T  36812474 gagaaatgatatttgtacaaccaatttctaacaacttttggacaacttt-ctctctcatactcac 36812411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 47998594 - 47998642
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaacttt 210  Q
    |||||||||||||||| |||| |||||  ||||||||||||||||||||    
T  47998594 gagaaatgatatttgtacaaccattttgtaacaactttttgacaacttt 47998642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 49424891 - 49424828
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| ||||  ||||  |||||||||||||||||||| || ||||||||||||    
T  49424891 gagaaatgatatttgtacaacctttttgtaacaactttttgacaacttt-ctctctcatactcac 49424828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 51224909 - 51224846
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||   ||||||||||||||||||| || ||||||||||||    
T  51224909 gagaaatgatatttgtacaaccattttgctacaactttttgacaacttt-ctctctcatactcac 51224846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 56025256 - 56025319
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||   ||||||||||||||||||| || ||||||||||||    
T  56025256 gagaaatgatatttgtacaaccattttgctacaactttttgacaacttt-ctctctcatactcac 56025319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 151
Target Start/End: Complemental strand, 23347811 - 23347780
Alignment:
Q  120 aagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||||||||||||||||||||||||||||    
T  23347811 aagttgtcacaaagtggatgtacaaatatcat 23347780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 151
Target Start/End: Original strand, 34116567 - 34116606
Alignment:
Q  112 ttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  34116567 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 34116606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 42815398 - 42815468
Alignment:
Q  156 aacaacgagaaatgatatttgtccaacaattttcgaacaactttt-tgacaactttcctatctcatactcac 226  Q
    ||||| |||||||||||||||| |||| |||||  |||||||||| |||||||||| || ||||||||||||    
T  42815398 aacaaagagaaatgatatttgtacaactattttgtaacaacttttgtgacaacttt-ctctctcatactcac 42815468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 43358613 - 43358675
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactca 225  Q
    |||||||||||||||| |||| | |||| |||||||||| ||||||||| || |||||||||||    
T  43358613 gagaaatgatatttgtacaaccaatttctaacaacttttggacaacttt-ctctctcatactca 43358675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 51389097 - 51389140
Alignment:
Q  108 gaagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||||    
T  51389097 gaagttgtcaaaaagttgttacaaagtggttgtacaaatatcat 51389140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 46794525 - 46794567
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||    
T  46794525 aagttgtcaaaaagttgtcagaaagtggttgtacaaatatcat 46794567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 51039140 - 51039182
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||||| | ||||||||||||||    
T  51039140 aagttgtcaaaaagttgtcacaaagtagttgtacaaatatcat 51039182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 51717306 - 51717348
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||    
T  51717306 aagttatcaagaagttgtcacaaattggttgtacaaatatcat 51717348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 4577557 - 4577625
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| ||||||| |||| ||||  |||||||| || |||||||||||| ||||    
T  4577557 gagaaatgatatttgtacaaccattttcgtacaatttttgtacaacttt-ctctctcatactcacattat 4577625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 18874992 - 18874925
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| ||||| |||| | ||||||||| ||||||||| || |||||||||||| ||||    
T  18874992 gagaaatgatatttgtacaacattttttg-acaacttttagacaacttt-ctctctcatactcacattat 18874925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 22920342 - 22920274
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||  |||| | |||| ||||||||||||||| |||| || |||||||||||| ||||    
T  22920342 gagaaatgatatttgcacaaccaatttctaacaactttttgacatcttt-ctctctcatactcacattat 22920274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 22971457 - 22971525
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||  |||| | |||| ||||||||||||||| |||| || |||||||||||| ||||    
T  22971457 gagaaatgatatttgcacaaccaatttctaacaactttttgacatcttt-ctctctcatactcacattat 22971525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 40755921 - 40755989
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||| ||||| ||||||| || ||| || |||||||||||| ||||    
T  40755921 gagaaatgatatttgtacaaccattttctaacaattttttgataa-ttttctctctcatactcacattat 40755989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 45286186 - 45286118
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||  |||||||||  ||||||||| || |||||||||||| ||||    
T  45286186 gagaaatgatatttgtacaaccattttgcaacaactttcagacaacttt-ctctctcatactcacattat 45286118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 48722069 - 48722137
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| || | |||||  |||||||||||||||| ||| || |||||||||||| ||||    
T  48722069 gagaaatgatatttgtacatccattttgcaacaactttttgacaa-ttttctctctcatactcacattat 48722137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 49768940 - 49768872
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| || | |||||  ||||| |||||||||||||| || |||||||||||| ||||    
T  49768940 gagaaatgatatttgtacatccattttgcaacaattttttgacaacttt-ctctctcatactcacattat 49768872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 52891921 - 52891872
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||| ||| |||| |||||| || ||||||||||||||||||    
T  52891921 gagaaatgatatgtgtacaactattttctaagaactttttgacaactttc 52891872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 55996422 - 55996490
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||  |||||| ||||| |||||||||| ||| || |||||||||||| ||||    
T  55996422 gagaaatgatatttgtacaatcattttctaacaattttttgacaa-ttttctctctcatactcacattat 55996490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 14090121 - 14090058
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||| |||||| ||||| | |||||||||  |||||||| || ||||||||||||    
T  14090121 gagaaatgatatttatccaaccatttttgtacaacttttaaacaacttt-ctctctcatactcac 14090058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 24772716 - 24772676
Alignment:
Q  111 gttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||| ||||||||| ||| ||||||||||||||||||    
T  24772716 gttgtcaaaaagttgtcataaaatggatgtacaaatatcat 24772676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 151
Target Start/End: Complemental strand, 33986189 - 33986161
Alignment:
Q  123 ttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||||||||||||||||||||||    
T  33986189 ttgtcacaaagtggatgtacaaatatcat 33986161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 45277152 - 45277089
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| | ||||  |||||||||| |||||||| || ||||||||||||    
T  45277152 gagaaatgatatttgtacaaccactttctcacaacttttttacaacttt-ctctctcatactcac 45277089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 47988554 - 47988488
Alignment:
Q  164 gaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||| |||| |||||| |||||||||||||||||||| || |||||||||||| ||||    
T  47988554 gaaatgatatttgtacaactattttctaacaactttttgacaacttt-ctctctcatactcacattat 47988488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 47997841 - 47997775
Alignment:
Q  164 gaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||| |||| |||||| |||||||||||||||||||| || |||||||||||| ||||    
T  47997841 gaaatgatatttgtacaactattttctaacaactttttgacaacttt-ctctctcatactcacattat 47997775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 48007128 - 48007062
Alignment:
Q  164 gaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||| |||| |||||| |||||||||||||||||||| || |||||||||||| ||||    
T  48007128 gaaatgatatttgtacaactattttctaacaactttttgacaacttt-ctctctcatactcacattat 48007062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 20380913 - 20380955
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  20380913 aagttgtcaagaagttgtcacaaagtggttgtacaaatatcat 20380955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 11335373 - 11335324
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  11335373 gagaaatgatatttgtacaaccattttctaacaactttttgacaactttc 11335324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 31017465 - 31017397
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||  |||||| |||||||||||||||| ||| || |||||||||||||||||    
T  31017465 gagaaatgatatttgtacaatcattttctaacaactttttgacaa-ttttctctctcatactcacgttat 31017397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 40159909 - 40159860
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  40159909 gagaaatgatatttgtacaactattttctaacaactttttgacaactttc 40159860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 226
Target Start/End: Original strand, 41877635 - 41877751
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcataaacaacaacgagaaatgatatttgtccaacaattttcgaacaactttttgacaact 208  Q
    |||||||||| | | ||||||||||||| ||||||||||||||       || |||||||||||||||| |||| |||||   |||||||||||||||||    
T  41877635 aagttgtcaaaagggtgtcacaaagtggttgtacaaatatcatttctctaaatgagaaatgatatttgtacaaccattttgctacaactttttgacaact 41877734  T
Q  209 ttcctatctcatactcac 226  Q
    || || ||||||||||||    
T  41877735 tt-ctctctcatactcac 41877751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 51032695 - 51032627
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||| |||||||||||||||| ||| || |||||||||||| ||||    
T  51032695 gagaaatgatatttgtacaaccattttctaacaactttttgacaa-ttttctctctcatactcacattat 51032627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 24537264 - 24537224
Alignment:
Q  111 gttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  24537264 gttgtcaaaaagttgtcacaaagtggatgtacaaatatcat 24537224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 7294123 - 7294166
Alignment:
Q  109 aagttgtc-aagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  7294123 aagttgtctaagaagttgtcacaaagtggatgtacaaatatcat 7294166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 26279878 - 26279952
Alignment:
Q  156 aacaacgagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    ||||| |||||||||||||||| |||| | ||||  ||||||||||||||||||| || |||||||||||| ||||    
T  26279878 aacaaagagaaatgatatttgtacaaccactttctgacaactttttgacaacttt-ctctctcatactcacattat 26279952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 151
Target Start/End: Complemental strand, 48945891 - 48945852
Alignment:
Q  112 ttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  48945891 ttgtcaagaagttgtcacaaagtggttgtacaaatatcat 48945852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 30796638 - 30796680
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  30796638 aagttgtcaagaagttgtcacaaagtggttgtgcaaatatcat 30796680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 34733315 - 34733357
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  34733315 aagttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 34733357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 48649583 - 48649648
Alignment:
Q  165 aaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    ||||||||||||| |||| | |||| |||||||||||||||||||| || |||||||||||| ||||    
T  48649583 aaatgatatttgtacaaccactttctaacaactttttgacaacttt-ctctctcatactcacattat 48649648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 51464296 - 51464338
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  51464296 aagttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 51464338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 462472 - 462404
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||   ||||||||| ||||||||| || |||||||||||||||||    
T  462472 gagaaatgatatttgtacaaccattttgtgacaacttttagacaacttt-ctctctcatactcacgttat 462404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 11173505 - 11173464
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatca 150  Q
    |||||||||| ||||||||||||||||| |||||||||||||    
T  11173505 aagttgtcaaaaagttgtcacaaagtggttgtacaaatatca 11173464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 37303145 - 37303077
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | ||||  ||||||||||||||||||| || |||||||||||| ||||    
T  37303145 gagaaatgatatttgtacaaccactttctcacaactttttgacaacttt-ctctctcatactcacattat 37303077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 37894314 - 37894250
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttt-tgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||| |||||||||| |||||||||| || ||||||||||||    
T  37894314 gagaaatgatatttgtacaaccattttctaacaacttttgtgacaacttt-ctctctcatactcac 37894250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 7949791 - 7949854
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||   ||||||||||||||||||| || ||||||||||||    
T  7949791 gagaaatgatatttgtacaaccattttgctacaactttttgacaacttt-ctttctcatactcac 7949854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 8066355 - 8066418
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| | ||||  ||||||||||||||||||| || ||||||||||||    
T  8066355 gagaaatgatatttgtacaaccactttctcacaactttttgacaacttt-ctctctcatactcac 8066418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 151
Target Start/End: Complemental strand, 18169201 - 18169162
Alignment:
Q  112 ttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  18169201 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 18169162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 48179126 - 48179075
Alignment:
Q  160 acgagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||||| |||| |||||| ||||  |||||||||||||||    
T  48179126 acgagaaatgatatttgtacaactattttctaacagttttttgacaactttc 48179075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 108478 - 108436
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| || |||||||||||||| ||||||||||||||    
T  108478 aagttgtcaaaaaattgtcacaaagtggttgtacaaatatcat 108436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 1901950 - 1901992
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||| | ||||||||||||||||| ||||||||||||||    
T  1901950 aagttgtctaaaagttgtcacaaagtggttgtacaaatatcat 1901992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 1911396 - 1911438
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||| | ||||||||||||||||| ||||||||||||||    
T  1911396 aagttgtctaaaagttgtcacaaagtggttgtacaaatatcat 1911438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 5398965 - 5398923
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| || |||||||||||||| ||||||||||||||    
T  5398965 aagttgtcaaaaaattgtcacaaagtggttgtacaaatatcat 5398923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 22813119 - 22813077
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||    
T  22813119 aagttgtcaaaaagttgtcagaaagtggttgtacaaatatcat 22813077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 26279931 - 26279889
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||    
T  26279931 aagttgtcaaaaagttgtcagaaagtggttgtacaaatatcat 26279889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 32008033 - 32008094
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactc 224  Q
    |||||||||||||||  |||| | |||| |||||||||||||||||||| || ||||||||||    
T  32008033 gagaaatgatatttgcacaaccaatttctaacaactttttgacaacttt-ctctctcatactc 32008094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 35272074 - 35272032
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| | ||||||||||||||| ||||||||||||||    
T  35272074 aagttgtcaaaaggttgtcacaaagtggttgtacaaatatcat 35272032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 51672910 - 51672868
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||    
T  51672910 aagttgtcaaaaagttatcacaaagtagatgtacaaatatcat 51672868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 7285 - 7217
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||  ||||||  ||||||||| ||||||||| || |||||||||||| ||||    
T  7285 gagaaatgatatttgtacaatcattttctgacaacttttggacaacttt-ctctctcatactcacattat 7217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 22813072 - 22813121
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| | ||||  ||||||||||||||||||||    
T  22813072 gagaaatgatatttgtacaaccactttctgacaactttttgacaactttc 22813121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 29573427 - 29573363
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttt-tgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||  |||||||||| |||||||||| || ||||||||||||    
T  29573427 gagaaatgatatttgtacaaccattttgtaacaacttttgtgacaacttt-ctctctcatactcac 29573363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 30805674 - 30805606
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |  | |||||  ||||||||||||||||| ||||| |||||||||||| ||||    
T  30805674 gagaaatgatatttgtacctccattttgcaacaactttttgacaac-ttcctctctcatactcacattat 30805606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 34271561 - 34271493
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | |||  ||||||||||||| |||||| || || ||||||||||||||    
T  34271561 gagaaatgatatttgtacaaccactttgtaacaactttttgataacttt-ctctcacatactcacgttat 34271493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 36869908 - 36869840
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||   ||||||||| ||||||||| || |||||||||||| ||||    
T  36869908 gagaaatgatatttgtacaaccattttttgacaacttttagacaacttt-ctctctcatactcacattat 36869840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 37303383 - 37303451
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | ||||   |||||||||||||||||| || |||||||||||| ||||    
T  37303383 gagaaatgatatttgtacaaccactttctcgcaactttttgacaacttt-ctctctcatactcacattat 37303451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 39604317 - 39604268
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| |||||  ||||| |||||||||||||||    
T  39604317 gagaaatgatatttgtacaaccatttttcaacaattttttgacaactttc 39604268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 40478355 - 40478295
Alignment:
Q  165 aaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    ||||||||||||| |||| |||||   ||||||||||||||||||| |||||||||| ||||    
T  40478355 aaatgatatttgtacaaccattttgctacaactttttgacaacttt-ctatctcatattcac 40478295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 43900828 - 43900760
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | |||   ||||||||||||||||||| || |||||||||||| ||||    
T  43900828 gagaaatgatatttgtacaaccactttattacaactttttgacaacttt-ctctctcatactcacattat 43900760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 44334872 - 44334804
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | |||   ||||||||||||||||||| || |||||||||||| ||||    
T  44334872 gagaaatgatatttgtacaaccactttattacaactttttgacaacttt-ctctctcatactcacattat 44334804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 47056597 - 47056534
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||  ||||| |||| ||||||||| || ||||||||||||    
T  47056597 gagaaatgatatttgtgcaaccattttgcaacaatttttggacaacttt-ctctctcatactcac 47056534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 45607071 - 45607029
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  45607071 aagttgtcaagaagttgtcacaaagtagatgtacaaatatcat 45607029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 9055267 - 9055330
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| | |||| |||||||||||||||||||| || ||||||||||||    
T  9055267 gagaaatgatatttgtacaaccaatttctaacaactttttgacaacttt-ctctctcatactcac 9055330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 156005 - 156048
Alignment:
Q  109 aagttgtc-aagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  156005 aagttgtctaagaagttgtcacaaagtggatgtacaaatatcat 156048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 47192974 - 47192939
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaa 144  Q
    ||||||||||||||||||||||||||||||||||||    
T  47192974 aagttgtcaagaagttgtcacaaagtggatgtacaa 47192939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 42640846 - 42640892
Alignment:
Q  165 aaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||||    
T  42640846 aaatgatatttgtacaactattttctaacaactttttgacaactttc 42640892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 48866954 - 48866996
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  48866954 aagttgtcaaaaagttgtcacaaagtggctgtacaaatatcat 48866996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 5378627 - 5378695
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||   ||||||||||||||||||| || |||||||||||| ||||    
T  5378627 gagaaatgatatttgtacaaccatttttatacaactttttgacaacttt-ctctctcatactcacattat 5378695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 19426580 - 19426648
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||   ||||||||||||||||||| || |||||||||||| ||||    
T  19426580 gagaaatgatatttgtacaaccattttgtgacaactttttgacaacttt-ctctctcatactcacattat 19426648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 30538626 - 30538694
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||||||||| | |||||||||  |||||||| || |||||||||||| ||||    
T  30538626 gagaaatgatatttgtacaacaattttggtacaacttttgtacaacttt-ctctctcatactcacattat 30538694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 33212042 - 33212110
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||| ||||| ||||||||||||||  | |||||||||||| ||||    
T  33212042 gagaaatgatatttgtacaaccattttctaacaattttttgacaacttt-atctctcatactcacattat 33212110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 33223554 - 33223595
Alignment:
Q  110 agttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  33223554 agttgtcaagaagttgtcacaaaatggttgtacaaatatcat 33223595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 42663130 - 42663089
Alignment:
Q  110 agttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||||| ||||||||||||| ||||||||||||||||||    
T  42663130 agttgtcaaaaagttgtcacaaaatggatgtacaaatatcat 42663089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 34349097 - 34349030
Alignment:
Q  163 agaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    ||||||||||||||| |||| ||||| | ||||||||||||||| ||| || |||||||||||| ||||    
T  34349097 agaaatgatatttgtacaaccatttttgtacaactttttgacaa-ttttctctctcatactcacattat 34349030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 2756999 - 2756952
Alignment:
Q  163 agaaatgatatttgtccaacaattttcgaacaactttttgacaacttt 210  Q
    ||||||||||||||| |||| | |||| ||||||||||||||||||||    
T  2756999 agaaatgatatttgtacaaccaatttctaacaactttttgacaacttt 2756952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 151
Target Start/End: Complemental strand, 25887630 - 25887599
Alignment:
Q  120 aagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||||||||||||||||||||||||||||    
T  25887630 aagttgtcacaaagtggatgtacaaatatcat 25887599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 19426627 - 19426585
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||    
T  19426627 aagttgtcaaaaagttgtcacaaaatggttgtacaaatatcat 19426585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 28596953 - 28596911
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||| || ||||||||||||||||| ||||||||||||||    
T  28596953 aagttgtaaaaaagttgtcacaaagtggttgtacaaatatcat 28596911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 28824550 - 28824508
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||    
T  28824550 aagttgtcaaaaagttgtcagaaagtggttgtacaaatatcat 28824508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 30769730 - 30769664
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||  ||||||||||||||||||||  | |||||||||||| ||||    
T  30769730 gagaaatgatatttgtacaactatttt--aacaactttttgacaacttt-atctctcatactcacattat 30769664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 40842452 - 40842410
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| |  |||||||||||||||||||||||||||||    
T  40842452 aagttgtcaaaagattgtcacaaagtggatgtacaaatatcat 40842410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 41018663 - 41018732
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttt-tgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||  |||| ||||| | ||||||||| |||||||||| ||||||||||||||| ||||    
T  41018663 gagaaatgatatttgaacaactatttttggacaacttttgtgacaacttt-ctatctcatactcacattat 41018732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 41966379 - 41966337
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| || |||||||||||||| ||||||||||||||    
T  41966379 aagttgtcaaaaaattgtcacaaagtggttgtacaaatatcat 41966337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 42584802 - 42584871
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttt-tgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||| ||| |||| |||||| |||||||||| |||||||||| || |||||||||||| ||||    
T  42584802 gagaaatgatatatgtacaaccattttctaacaacttttgtgacaacttt-ctctctcatactcacattat 42584871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 1789994 - 1790054
Alignment:
Q  165 aaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    ||||||||||||| |||| |||||   ||||||||||||||||||| || ||||||||||||    
T  1789994 aaatgatatttgtacaactattttgcgacaactttttgacaacttt-ctctctcatactcac 1790054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 10591202 - 10591161
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatca 150  Q
    |||||||  ||||||||||||||||||| |||||||||||||    
T  10591202 aagttgtttagaagttgtcacaaagtggttgtacaaatatca 10591161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 21037305 - 21037256
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||  | |||| |||||||||||||||||||||    
T  21037305 gagaaatgatatttgtacaattaatttctaacaactttttgacaactttc 21037256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 24700121 - 24700189
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||  |||||  ||||||||||| |||||||| || | |||||||||||||||    
T  24700121 gagaaatgatatttgtacaatcattttgtaacaacttttttacaacttt-ctctatcatactcacgttat 24700189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25887741 - 25887694
Alignment:
Q  1 tttagacaacttttggtgcaactt---ttttctcacttttcattggtc 45  Q
    ||||||||||||||||| ||||||   |||||||||||||||||||||    
T  25887741 tttagacaacttttggtacaacttcttttttctcacttttcattggtc 25887694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 27704435 - 27704503
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| ||||| | |||||||||  ||||| || ||||||||||||||| ||||    
T  27704435 gagaaatgatatttgtacaactatttttgtacaacttttgtacaacctt-ctatctcatactcacattat 27704503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 28548292 - 28548224
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| ||||| | |||||||||  |||||||| || |||||||||||| ||||    
T  28548292 gagaaatgatatttgtacaactattttggtacaacttttgtacaacttt-ctctctcatactcacattat 28548224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 28824503 - 28824552
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| | ||||  ||||||||||||||||||||    
T  28824503 gagaaatgatatttgtacaaccactttctgacaactttttgacaactttc 28824552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 33684680 - 33684748
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | ||||  |||||||||| |||||||| || |||||||||||| ||||    
T  33684680 gagaaatgatatttgtacaaccactttctcacaacttttttacaacttt-ctctctcatactcacattat 33684748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 42276091 - 42276140
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| |||||| ||||| ||||||| |||||||    
T  42276091 gagaaatgatatttgtacaactattttctaacaattttttgataactttc 42276140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 42476616 - 42476567
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| ||||| ||||| ||||| |||| ||||||||||    
T  42476616 gagaaatgatatttgtacaacatttttctaacaatttttggacaactttc 42476567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 48522156 - 48522224
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| ||||| | ||||||||| |||||||||  | |||||||||||| ||||    
T  48522156 gagaaatgatatttgtacaaccatttttgtacaacttttagacaacttt-ttctctcatactcacattat 48522224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 2790178 - 2790245
Alignment:
Q  163 agaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    ||||||||||||||| |||| | |||  ||||| |||||||||||||| || |||||||||||| ||||    
T  2790178 agaaatgatatttgtacaaccactttgtaacaattttttgacaacttt-ctctctcatactcacattat 2790245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 20406541 - 20406604
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| || ||   ||||||||||||||||||| || ||||||||||||    
T  20406541 gagaaatgatatttgtacaaccatcttgtgacaactttttgacaacttt-ctttctcatactcac 20406604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 27331098 - 27331050
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaacttt 210  Q
    ||||||||||||||||  ||| |||||| ||||| ||||||||||||||    
T  27331098 gagaaatgatatttgtataactattttctaacaattttttgacaacttt 27331050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 42060656 - 42060719
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||   | ||||||||||||||||| || ||||||||||||    
T  42060656 gagaaatgatatttgtacaaccattttgctataactttttgacaacttt-ctctctcatactcac 42060719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 50142006 - 50141937
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttatt 232  Q
    |||||||||||||||| |||| ||||||  ||||||||||||||||||| || |||||||||||| |||||    
T  50142006 gagaaatgatatttgttcaactattttctcacaactttttgacaacttt-ctctctcatactcacattatt 50141937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 18541122 - 18541073
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  18541122 gagaaatgatatttgtacaaccattttctaacaactttttgacaactttc 18541073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 27810318 - 27810255
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| | |||| |||||||||||||||||||| || ||||||||||||    
T  27810318 gagaaatgatatttgtacaaccaatttctaacaactttttgacaacttt-ctctctcatactcac 27810255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 50017494 - 50017432
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactca 225  Q
    |||||||||||||||| ||||||||||   ||||||||||||||||||| || |||||||||||    
T  50017494 gagaaatgatatttgtacaacaattttattacaactttttgacaacttt-ctctctcatactca 50017432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 31427981 - 31428023
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  31427981 aagttgtcaagaaattgtcacaaagtggttgtacaaatatcat 31428023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 50226903 - 50226945
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  50226903 aagttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 50226945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 3606165 - 3606116
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| | |||| |||||||||||||||||||||    
T  3606165 gagaaatgatatttgtacaaccaatttctaacaactttttgacaactttc 3606116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 8905728 - 8905788
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatact 223  Q
    |||||||||||||||| |||| |||||  |||||| ||||||||||||| ||||||||||||    
T  8905728 gagaaatgatatttgtacaactattttttaacaaccttttgacaacttt-ctatctcatact 8905788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 12999893 - 12999825
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||| ||||||||||  |||||||| || |||||||||||| ||||    
T  12999893 gagaaatgatatttgtacaaccattttctaacaacttttgtacaacttt-ctctctcatactcacattat 12999825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 51848886 - 51848942
Alignment:
Q  168 tgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactca 225  Q
    |||||||||| |||| |||||| ||||||||||||||||||||  |||||||||||||    
T  51848886 tgatatttgtacaaccattttctaacaactttttgacaacttt-atatctcatactca 51848942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 15182653 - 15182610
Alignment:
Q  163 agaaatgatatttgtccaacaattttcgaacaactttttgacaa 206  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||    
T  15182653 agaaatgatatttgtacaactattttctaacaactttttgacaa 15182610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 49189279 - 49189217
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactca 225  Q
    |||||||||||||||| |||| |||||   ||||||||||||||||||| || |||||||||||    
T  49189279 gagaaatgatatttgtacaaccattttgctacaactttttgacaacttt-ctttctcatactca 49189217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 33076119 - 33076169
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttt-tgacaactttc 211  Q
    |||||||||||||||| |||| |||||| |||||||||| |||||||||||    
T  33076119 gagaaatgatatttgtacaaccattttctaacaacttttatgacaactttc 33076169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 49425784 - 49425743
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  49425784 aagttgtcaa-aagttgtcacaaagtggttgtacaaatatcat 49425743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 1615036 - 1615104
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | ||||  |||||||||| |||||||| || |||||||||||| ||||    
T  1615036 gagaaatgatatttgtacaaccactttctcacaactttttaacaacttt-ctttctcatactcacattat 1615104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 9445108 - 9445157
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    ||||||||||||| || |||| |||||  |||||||||||||||||||||    
T  9445108 gagaaatgatattcgtacaaccattttgtaacaactttttgacaactttc 9445157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 12708090 - 12708139
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    ||||||||||||||||  ||| |||||| |||||||||||||||| ||||    
T  12708090 gagaaatgatatttgtagaaccattttctaacaactttttgacaattttc 12708139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 12713544 - 12713593
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    ||||||||||||||||  ||| |||||| |||||||||||||||| ||||    
T  12713544 gagaaatgatatttgtagaaccattttctaacaactttttgacaattttc 12713593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 12717635 - 12717684
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    ||||||||||||||||  ||| |||||| |||||||||||||||| ||||    
T  12717635 gagaaatgatatttgtagaaccattttctaacaactttttgacaattttc 12717684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 25989055 - 25988987
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||  |||||||||| ||||| ||| || |||||||||||| ||||    
T  25989055 gagaaatgatatttgtacaaccattttttaacaacttttagacaa-ttttctctctcatactcacattat 25988987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 28253015 - 28253083
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | ||||  ||||||||||||||| ||| || |||||||||||| ||||    
T  28253015 gagaaatgatatttgtacaaccactttctcacaactttttgacaa-ttttctctctcatactcacattat 28253083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30631758 - 30631805
Alignment:
Q  1 tttagacaacttttggtgcaactt---ttttctcacttttcattggtc 45  Q
    ||||||||||||||||| ||||||   |||||||||||||||||||||    
T  30631758 tttagacaacttttggtacaacttcttttttctcacttttcattggtc 30631805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 31436820 - 31436888
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | ||||  ||||||||||||||| ||| || |||||||||||| ||||    
T  31436820 gagaaatgatatttgtacaaccactttctcacaactttttgacaa-ttttctctctcatactcacattat 31436888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35846232 - 35846279
Alignment:
Q  1 tttagacaacttttggtgcaactt---ttttctcacttttcattggtc 45  Q
    ||||||||||||||||| ||||||   |||||||||||||||||||||    
T  35846232 tttagacaacttttggtacaacttcttttttctcacttttcattggtc 35846279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 36690643 - 36690575
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | ||||  |||| |||||||||||||| || |||||||||||| ||||    
T  36690643 gagaaatgatatttgtacaaccaatttctcacaattttttgacaacttt-ctctctcatactcacattat 36690575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 36706744 - 36706676
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | ||||  |||| |||||||||||||| || |||||||||||| ||||    
T  36706744 gagaaatgatatttgtacaaccaatttctcacaattttttgacaacttt-ctctctcatactcacattat 36706676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 39010814 - 39010882
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| || | | ||||  ||||||||||||||||||| || |||||||||||| ||||    
T  39010814 gagaaatgatatttgtacagccactttctcacaactttttgacaacttt-ctctctcatactcacattat 39010882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 44672101 - 44672033
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||  |||||  |||||||||||||||| ||| || |||||||||||| ||||    
T  44672101 gagaaatgatatttgtacaatcattttttaacaactttttgacaa-ttttctctctcatactcacattat 44672033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 45042261 - 45042329
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||| ||||| |||||||||| |||  | |||||||||||| ||||    
T  45042261 gagaaatgatatttgtacaactattttctaacaattttttgacaa-ttttttctctcatactcacattat 45042329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 49596235 - 49596303
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||   |||| |||||||||||||| || |||||||||||| ||||    
T  49596235 gagaaatgatatttgtacaaccattttattacaattttttgacaacttt-ctctctcatactcacattat 49596303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 51250346 - 51250278
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||   |||  |||||||||||||| || |||||||||||||||||    
T  51250346 gagaaatgatatttgtacaaccattttaatacagttttttgacaacttt-ctctctcatactcacgttat 51250278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 151
Target Start/End: Original strand, 5309074 - 5309106
Alignment:
Q  119 gaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||||||||||| ||||||||||||||    
T  5309074 gaagttgtcacaaagtggttgtacaaatatcat 5309106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 18610773 - 18610836
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||   |||||||||| |||||||| || ||||||||||||    
T  18610773 gagaaatgatatttgtacaactattttgtgacaacttttttacaacttt-ctctctcatactcac 18610836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 45740574 - 45740610
Alignment:
Q  115 tcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  45740574 tcaaaaagttgtcacaaagtggttgtacaaatatcat 45740610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 46948026 - 46947986
Alignment:
Q  111 gttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||| ||||||||| ||| ||||||||||||||||||    
T  46948026 gttgtcaaaaagttgtcataaaatggatgtacaaatatcat 46947986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 52669793 - 52669833
Alignment:
Q  110 agttgtcaagaagttgtcacaaagtggatgtacaaatatca 150  Q
    ||||||| ||||||||||||||| ||| |||||||||||||    
T  52669793 agttgtccagaagttgtcacaaaatggttgtacaaatatca 52669833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 17835612 - 17835676
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacg 227  Q
    |||||||||||||||| ||||  ||||| |||||||||||||||||||| || |||||||||||||    
T  17835612 gagaaatgatatttgtacaacccttttctaacaactttttgacaacttt-ctctctcatactcacg 17835676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 3800564 - 3800626
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactca 225  Q
    |||||||||||||||| |||| |||||   ||||||||||||||||||| ||||||||||||||    
T  3800564 gagaaatgatatttgtgcaaccattttattacaactttttgacaacttt-ctatctcatactca 3800626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 8395342 - 8395411
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttatt 232  Q
    |||||||||||||||| |||| | ||||  ||||||||||||||||||| || |||||||||||| |||||    
T  8395342 gagaaatgatatttgtacaaccactttctcacaactttttgacaacttt-ctctctcatactcacattatt 8395411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 8778943 - 8778894
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| |||||  |||||||||||||||||||||    
T  8778943 gagaaatgatatttgtacaaccattttttaacaactttttgacaactttc 8778894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 19789147 - 19789079
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||   ||||||||||||||||||| || |||||||||||| ||||    
T  19789147 gagaaatgatatttgtacaaccattttattacaactttttgacaacttt-ctctctcatactcacattat 19789079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 29383557 - 29383625
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| | ||||  ||||||||||||||||||| || |||||||||||| ||||    
T  29383557 gagaaatgatatttgtacaaccactttctgacaactttttgacaacttt-ctctctcatactcacattat 29383625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 25924935 - 25924872
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||   ||||||||||||||||||| || ||||||||||||    
T  25924935 gagaaatgatatttgtacaaccattttgctacaactttttgacaacttt-ctctctcatactcac 25924872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 28965911 - 28965848
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||   ||||||||||||||||||| || ||||||||||||    
T  28965911 gagaaatgatatttgtacaaccattttgttacaactttttgacaacttt-ctctctcatactcac 28965848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 11785349 - 11785423
Alignment:
Q  156 aacaacgagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    ||||| |||||||||||||||| |||| |||||   |||| |||||||||||||| |||||||||| |||| ||||    
T  11785349 aacaaagagaaatgatatttgtacaaccattttgtgacaattttttgacaacttt-ctatctcatattcacattat 11785423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 26391356 - 26391285
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttg-acaactttcctatctcatactcacgttatt 232  Q
    |||||||||||||||| |||| |||||  |||||||||||| |||| |||| | |||||||||||| |||||    
T  26391356 gagaaatgatatttgtacaaccattttttaacaactttttgtacaattttcttctctcatactcacattatt 26391285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 151
Target Start/End: Original strand, 32457279 - 32457318
Alignment:
Q  112 ttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  32457279 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 32457318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 6435083 - 6435041
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||| | ||||||||||||||||| ||||||||||||||    
T  6435083 aagttgtctaaaagttgtcacaaagtggttgtacaaatatcat 6435041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 9954595 - 9954553
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||    
T  9954595 aagttgtcaaaaagttgtcacaaattggttgtacaaatatcat 9954553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 14094914 - 14094979
Alignment:
Q  165 aaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    ||||||||||||| || | | |||| |||||||||||||||||||| || |||||||||||| ||||    
T  14094914 aaatgatatttgtacagccaatttctaacaactttttgacaacttt-ctctctcatactcacattat 14094979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 21506339 - 21506404
Alignment:
Q  165 aaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    ||||||||||||| |||| |||||   ||||||||||||||||||| || |||||||||||| ||||    
T  21506339 aaatgatatttgtacaaccattttttgacaactttttgacaacttt-ctctctcatactcacattat 21506404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 28883819 - 28883749
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc-ctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||  || ||| |||||||||||||| || |||||||||||| ||||    
T  28883819 gagaaatgatatttgtacaaccattttttaataaccttttgacaactttctctctctcatactcacattat 28883749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 29383604 - 29383562
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||    
T  29383604 aagttgtcaaaaagttgtcagaaagtggttgtacaaatatcat 29383562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 9189015 - 9188947
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||  |||||||||| |||||||||  | |||||||||||| ||||    
T  9189015 gagaaatgatatttgtacaaccattttttaacaacttttagacaacttt-atctctcatactcacattat 9188947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 15666844 - 15666795
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| ||||||  |||||||||| |||||||||    
T  15666844 gagaaatgatatttgtacaaccattttctgacaactttttaacaactttc 15666795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24752389 - 24752342
Alignment:
Q  1 tttagacaacttttggtgcaactt---ttttctcacttttcattggtc 45  Q
    ||||||||||||||||| ||||||   |||||||||||||||||||||    
T  24752389 tttagacaacttttggtacaacttcttttttctcacttttcattggtc 24752342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 32729889 - 32729957
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| ||||||  |||||||||  |||||||| || |||||||||||| ||||    
T  32729889 gagaaatgatatttgtacaaccattttctgacaacttttatacaacttt-ctctctcatactcacattat 32729957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 151
Target Start/End: Original strand, 11563 - 11602
Alignment:
Q  112 ttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  11563 ttgtcaagaagttgtcacaaagtagatgtacaaatatcat 11602  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 219688 - 219730
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  219688 aagttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 219730  T

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Target: scaffold0154 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 4315 - 4383
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcacgttat 231  Q
    |||||||||||||||| |||| |||||   | ||||||||||||||||| ||||||||||||||| ||||    
T  4315 gagaaatgatatttgtacaaccattttatgataactttttgacaacttt-ctatctcatactcacattat 4383  T

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Target: scaffold0172 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 16975 - 17038
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    |||||||||||||||| |||| |||||   ||||||||||||||||||| || ||||||||||||    
T  16975 gagaaatgatatttgtacaaccattttactacaactttttgacaacttt-ctctctcatactcac 17038  T

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Target: scaffold0131 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 151
Target Start/End: Original strand, 15561 - 15600
Alignment:
Q  112 ttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  15561 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcat 15600  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 72241 - 72179
Alignment:
Q  161 cgagaaatgatatttgtccaacaattttcgaacaactttttgacaactttcctatctcatactcac 226  Q
    ||||||||||||||||| |||| |||||  |||||||||| ||||||||||   ||||||||||||    
T  72241 cgagaaatgatatttgtacaaccattttgtaacaacttttagacaactttc---tctcatactcac 72179  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 113672 - 113630
Alignment:
Q  109 aagttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    ||||||| || ||||||||||||||||| ||||||||||||||    
T  113672 aagttgttaaaaagttgtcacaaagtggttgtacaaatatcat 113630  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 155906 - 155955
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaactttc 211  Q
    |||||||||||||||| |||| |||||   ||||||||||||||||||||    
T  155906 gagaaatgatatttgtacaaccattttattacaactttttgacaactttc 155955  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 60469 - 60517
Alignment:
Q  162 gagaaatgatatttgtccaacaattttcgaacaactttttgacaacttt 210  Q
    |||||||||||||||| |||| |||||   |||||||||||||||||||    
T  60469 gagaaatgatatttgtacaaccattttattacaactttttgacaacttt 60517  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 6472 - 6432
Alignment:
Q  111 gttgtcaagaagttgtcacaaagtggatgtacaaatatcat 151  Q
    |||||||| ||||||||| ||| ||||||||||||||||||    
T  6472 gttgtcaaaaagttgtcataaaatggatgtacaaatatcat 6432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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