View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0840_low_26 (Length: 295)
Name: NF0840_low_26
Description: NF0840
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0840_low_26 |
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Alignment Details
Target: chr5 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 16427128 - 16427014
Alignment:
| Q |
85 |
acatcatcagaaccaaaagaagataacaaattctcaaactcatcttccataacaccttcaacatcccacaaaacaccgtccattttcacaaacgaatcat |
184 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16427128 |
acatcatctgaaccaaaagaagataacaaattctcaaactcatcttccataacaccttcaacatcccacaaaacaccgtccattttcacaaacgaatcat |
16427029 |
T |
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| Q |
185 |
caatcgttacactgt |
199 |
Q |
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||||||||||||||| |
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| T |
16427028 |
caatcgttacactgt |
16427014 |
T |
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