View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0841_low_47 (Length: 386)
Name: NF0841_low_47
Description: NF0841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0841_low_47 |
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Alignment Details
Target: chr6 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 123 - 298
Target Start/End: Original strand, 10759080 - 10759254
Alignment:
| Q |
123 |
tgaaattgacaccaaagaaaagcaaaccagagactttaaaaggaacacaccaaagtctcaaacaaacatcaccatttattttgattattaagtcatattc |
222 |
Q |
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||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10759080 |
tgaaattgacaccaaagaaaagcaa----gagactttgaaaggaacacaccaaaatctcaaacaaacatcaccatttattttgattattaagtcatattc |
10759175 |
T |
|
| Q |
223 |
tcagtcatatggtgttttaataataacaaac---ctaataatgatcaagacttctgatcatttatccattgatgatgtc |
298 |
Q |
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|||||||||||| |||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||| |
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| T |
10759176 |
tcagtcatatggcgttttaataataacaaaccttctaacaatgattaagacttctgatcatttatccattgatgatgtc |
10759254 |
T |
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