View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0841_low_50 (Length: 363)
Name: NF0841_low_50
Description: NF0841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0841_low_50 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 142 - 363
Target Start/End: Original strand, 8262459 - 8262680
Alignment:
| Q |
142 |
ggaccaataaagagacagagaagcagagtcttaaatatagtgacatttaattttttcaacaacccaacaacaaataggaaatgggcacattaaattttga |
241 |
Q |
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| T |
8262459 |
ggaccaataaagagacagagaagcagagtcttaaatatagtgacatttaattttttcaacaacccaacaacaaataggaaatgggcacattaaattttta |
8262558 |
T |
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| Q |
242 |
agatttgaaacaataagagnnnnnnngcataatttttgaattgtattatcatagaaacagagatggtcagtgagacaagatgttgagtttagctttgaac |
341 |
Q |
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| T |
8262559 |
agatttgaaacaataagagaaaaaaagcataatttttgaattgtattatcatagaaacagagatggtcagtgagacaagatgttgagtttagctttgaac |
8262658 |
T |
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| Q |
342 |
atgttcctatatttatgagttc |
363 |
Q |
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| T |
8262659 |
atgttcctatatttatgagttc |
8262680 |
T |
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