View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0841_low_67 (Length: 291)
Name: NF0841_low_67
Description: NF0841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0841_low_67 |
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Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 30 - 282
Target Start/End: Complemental strand, 43343443 - 43343191
Alignment:
| Q |
30 |
gttctcgtctaagtcagatgtttcgtataggaatggaaaaaggttaggttttccacttttttgtccttcttgtgggatgaattcgtagctaaatgatctc |
129 |
Q |
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| T |
43343443 |
gttctcgtctaagtcagatgtttcgtataggaatggaaaaaggttaggttttccacttttttgtccttcttgtgggatgaattcgtagctaaatgatctc |
43343344 |
T |
|
| Q |
130 |
cgtcctcctatcaccatgaattctccatttggaagaagttgttgagttccatacctattaattcattataatcaaattagataaactgtttgaataaaac |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
43343343 |
cgtcctcctatcaccatgaattctccatttggaagaagttgttgagttccatacctattaattcattataatcaaattagatcaactgtttgaataaaac |
43343244 |
T |
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| Q |
230 |
atctgatcaattaagcttttattatataaattatttctataagcgtttcatat |
282 |
Q |
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| T |
43343243 |
atctgatcaattaagcttttattatataaattatttctataagcgtttcatat |
43343191 |
T |
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