View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0843_low_27 (Length: 254)
Name: NF0843_low_27
Description: NF0843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0843_low_27 |
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Alignment Details
Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 10397633 - 10397876
Alignment:
| Q |
1 |
cttgtcaataaccaggaaataaaatctaaacaacagacctcgcattctttttgctgaactttcatcgcattgaccgctcttgcattggcaaatctccatt |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10397633 |
cttgtcaataaccaggaaataaaatctaaacaacagacctcgcattctttttgctgaactttcatcgcattgaccgctcttgcattggcaaatctccatt |
10397732 |
T |
|
| Q |
101 |
gcagataccgattataaaacattctaagtgaatgcacatcttcctgatgactagaccctttcttccctttcctcgtatccaccacaggtttcgaaaattg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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|
| T |
10397733 |
gcagataccgattataaaacattctaagtgaatgcacatcttcctgatgactagaccctttcttccctttcctcgtatccaccacaggtttcgcaaattg |
10397832 |
T |
|
| Q |
201 |
cggagccaccggcggctttgtaacagaagcatgttgcctctctg |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10397833 |
cggagccaccggcggctttgtaacagaagcatgttgcctctctg |
10397876 |
T |
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