View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0844-INSERTION-3 (Length: 434)

Name: NF0844-INSERTION-3
Description: NF0844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0844-INSERTION-3
NF0844-INSERTION-3
[»] chr4 (77 HSPs)
chr4 (50-419)||(31273242-31273612)
chr4 (96-419)||(37259881-37260205)
chr4 (121-419)||(51697707-51698008)
chr4 (166-419)||(19106459-19106710)
chr4 (252-419)||(5271423-5271588)
chr4 (256-419)||(31268962-31269125)
chr4 (252-419)||(37264568-37264735)
chr4 (251-419)||(13521996-13522165)
chr4 (253-419)||(12823899-12824065)
chr4 (239-419)||(32082095-32082274)
chr4 (254-419)||(5928223-5928388)
chr4 (254-411)||(8693637-8693794)
chr4 (254-419)||(16420956-16421120)
chr4 (251-419)||(55251644-55251810)
chr4 (203-357)||(32221163-32221317)
chr4 (276-419)||(13059358-13059501)
chr4 (276-419)||(31765830-31765977)
chr4 (259-413)||(33468983-33469137)
chr4 (254-419)||(8030480-8030645)
chr4 (254-419)||(19101903-19102068)
chr4 (266-419)||(47244186-47244339)
chr4 (310-419)||(42758759-42758868)
chr4 (288-419)||(33463360-33463491)
chr4 (239-419)||(12878138-12878330)
chr4 (271-419)||(47574567-47574716)
chr4 (260-398)||(51696931-51697072)
chr4 (303-413)||(13065778-13065888)
chr4 (287-419)||(19906210-19906342)
chr4 (251-419)||(31729391-31729543)
chr4 (302-419)||(2819818-2819935)
chr4 (254-419)||(48276653-48276807)
chr4 (318-419)||(10120813-10120913)
chr4 (303-419)||(12874514-12874630)
chr4 (255-313)||(55810257-55810315)
chr4 (327-419)||(653043-653134)
chr4 (310-409)||(1151312-1151411)
chr4 (303-419)||(4550973-4551088)
chr4 (302-404)||(32545068-32545171)
chr4 (304-368)||(6070563-6070627)
chr4 (315-410)||(19541174-19541269)
chr4 (171-263)||(39319481-39319572)
chr4 (240-302)||(8652129-8652192)
chr4 (240-302)||(8663936-8663999)
chr4 (96-258)||(16947721-16947886)
chr4 (327-370)||(36354176-36354219)
chr4 (327-370)||(36359294-36359337)
chr4 (327-370)||(39999069-39999112)
chr4 (327-370)||(40004027-40004070)
chr4 (327-370)||(54343203-54343246)
chr4 (327-370)||(54348357-54348400)
chr4 (339-404)||(20513118-20513182)
chr4 (327-419)||(8980289-8980380)
chr4 (327-419)||(8985409-8985500)
chr4 (327-419)||(13700510-13700601)
chr4 (327-419)||(21299837-21299928)
chr4 (327-419)||(41393245-41393336)
chr4 (327-419)||(51019377-51019468)
chr4 (320-389)||(52691089-52691158)
chr4 (327-419)||(53797629-53797720)
chr4 (327-419)||(54991486-54991577)
chr4 (324-419)||(24490028-24490123)
chr4 (339-404)||(16595953-16596017)
chr4 (350-419)||(16953107-16953176)
chr4 (329-413)||(8083037-8083121)
chr4 (327-419)||(13695159-13695250)
chr4 (327-419)||(21304957-21305048)
chr4 (327-419)||(47046311-47046402)
chr4 (324-363)||(10318839-10318878)
chr4 (260-303)||(23093112-23093155)
chr4 (339-404)||(15020485-15020549)
chr4 (318-383)||(33722959-33723025)
chr4 (324-362)||(39319628-39319666)
chr4 (326-372)||(40408196-40408242)
chr4 (327-419)||(13710669-13710759)
chr4 (324-357)||(34560494-34560527)
chr4 (324-356)||(3998123-3998155)
chr4 (204-263)||(33463494-33463553)
[»] chr1 (52 HSPs)
chr1 (96-412)||(16649624-16649939)
chr1 (50-383)||(25854895-25855226)
chr1 (26-413)||(51041473-51041854)
chr1 (100-411)||(10139859-10140172)
chr1 (244-413)||(47451235-47451404)
chr1 (247-411)||(40165899-40166063)
chr1 (253-419)||(23192821-23192987)
chr1 (249-419)||(33301184-33301354)
chr1 (249-398)||(3094034-3094184)
chr1 (254-419)||(47455390-47455555)
chr1 (254-419)||(19799017-19799182)
chr1 (252-411)||(26927734-26927893)
chr1 (254-411)||(10135382-10135539)
chr1 (254-419)||(39588371-39588536)
chr1 (256-419)||(18784553-18784716)
chr1 (252-419)||(16035526-16035699)
chr1 (266-413)||(38620631-38620777)
chr1 (252-371)||(16832025-16832144)
chr1 (303-407)||(12259971-12260075)
chr1 (254-337)||(25843738-25843821)
chr1 (103-248)||(47452066-47452214)
chr1 (303-419)||(11806334-11806450)
chr1 (303-419)||(8900229-8900345)
chr1 (324-419)||(10106100-10106194)
chr1 (324-419)||(38734272-38734366)
chr1 (318-419)||(2493822-2493923)
chr1 (339-409)||(12906166-12906235)
chr1 (324-419)||(13890810-13890904)
chr1 (324-419)||(39747169-39747263)
chr1 (317-413)||(5346652-5346748)
chr1 (324-419)||(26651170-26651264)
chr1 (318-404)||(27761858-27761944)
chr1 (327-370)||(36684767-36684810)
chr1 (324-413)||(5602435-5602523)
chr1 (339-404)||(33380940-33381004)
chr1 (327-419)||(5724979-5725070)
chr1 (327-419)||(11251117-11251208)
chr1 (327-419)||(37404420-37404511)
chr1 (318-370)||(4632979-4633031)
chr1 (318-377)||(19422923-19422982)
chr1 (327-370)||(27716443-27716486)
chr1 (327-370)||(34318276-34318319)
chr1 (327-370)||(37409589-37409632)
chr1 (324-362)||(8267891-8267929)
chr1 (327-419)||(3584601-3584692)
chr1 (318-398)||(24159824-24159904)
chr1 (318-409)||(36724698-36724789)
chr1 (327-363)||(5730105-5730141)
chr1 (324-419)||(14582096-14582190)
chr1 (251-303)||(46696593-46696645)
chr1 (327-370)||(11387882-11387925)
chr1 (324-357)||(41098017-41098050)
[»] chr5 (56 HSPs)
chr5 (113-419)||(39522833-39523140)
chr5 (151-419)||(561290-561558)
chr5 (151-419)||(42001257-42001525)
chr5 (253-419)||(41996590-41996756)
chr5 (254-419)||(26667198-26667363)
chr5 (254-419)||(26938795-26938960)
chr5 (254-419)||(29167977-29168142)
chr5 (253-419)||(556620-556786)
chr5 (250-419)||(39518332-39518501)
chr5 (254-419)||(12102950-12103116)
chr5 (256-419)||(36423565-36423728)
chr5 (254-419)||(12045143-12045309)
chr5 (254-419)||(37248799-37248964)
chr5 (253-419)||(12501903-12502070)
chr5 (254-419)||(7451684-7451849)
chr5 (259-419)||(36428640-36428800)
chr5 (275-419)||(36942269-36942413)
chr5 (254-419)||(37652834-37652999)
chr5 (254-419)||(10759824-10759992)
chr5 (276-419)||(36937515-36937658)
chr5 (253-419)||(6155423-6155589)
chr5 (253-419)||(6514605-6514770)
chr5 (266-419)||(40147833-40147986)
chr5 (254-419)||(41587164-41587329)
chr5 (121-419)||(11981284-11981584)
chr5 (254-411)||(3665857-3666015)
chr5 (253-419)||(35679879-35680048)
chr5 (277-413)||(20181073-20181209)
chr5 (258-419)||(32461553-32461702)
chr5 (253-419)||(12041936-12042102)
chr5 (304-403)||(12102851-12102950)
chr5 (311-420)||(15414884-15414993)
chr5 (254-336)||(37550089-37550170)
chr5 (106-263)||(23977484-23977642)
chr5 (151-263)||(36937649-36937761)
chr5 (327-419)||(24435873-24435964)
chr5 (324-419)||(7805068-7805162)
chr5 (324-419)||(14374132-14374226)
chr5 (327-419)||(13582694-13582785)
chr5 (327-419)||(36253826-36253917)
chr5 (327-419)||(17510058-17510149)
chr5 (303-371)||(9911128-9911196)
chr5 (171-274)||(15415020-15415123)
chr5 (327-370)||(26709102-26709145)
chr5 (327-370)||(26978836-26978879)
chr5 (327-370)||(42019573-42019616)
chr5 (327-419)||(24771361-24771452)
chr5 (318-370)||(1414103-1414155)
chr5 (318-370)||(24776867-24776919)
chr5 (327-363)||(41853548-41853584)
chr5 (327-370)||(17504953-17504996)
chr5 (323-357)||(13301551-13301585)
chr5 (339-404)||(18265524-18265588)
chr5 (324-419)||(28857858-28857954)
chr5 (324-357)||(31731540-31731573)
chr5 (327-419)||(41858593-41858684)
[»] chr8 (58 HSPs)
chr8 (100-419)||(17025706-17026026)
chr8 (100-419)||(17556198-17556518)
chr8 (129-410)||(34118267-34118548)
chr8 (151-398)||(4238340-4238588)
chr8 (100-419)||(38182241-38182563)
chr8 (253-419)||(31449870-31450036)
chr8 (254-413)||(33416473-33416632)
chr8 (252-419)||(18876371-18876537)
chr8 (254-419)||(44925927-44926092)
chr8 (250-383)||(40130726-40130859)
chr8 (97-413)||(40125895-40126192)
chr8 (253-411)||(1807397-1807555)
chr8 (259-398)||(4243079-4243218)
chr8 (253-419)||(1910973-1911139)
chr8 (256-407)||(28559670-28559821)
chr8 (302-419)||(19166608-19166725)
chr8 (96-411)||(2965389-2965713)
chr8 (300-419)||(36683551-36683670)
chr8 (304-413)||(17953883-17953992)
chr8 (303-413)||(24090602-24090712)
chr8 (304-419)||(15875672-15875787)
chr8 (254-336)||(19915073-19915155)
chr8 (303-411)||(23548644-23548752)
chr8 (254-419)||(43302722-43302880)
chr8 (296-411)||(2355471-2355586)
chr8 (326-419)||(33616731-33616823)
chr8 (324-407)||(19430011-19430093)
chr8 (324-407)||(19435513-19435595)
chr8 (324-407)||(19566160-19566242)
chr8 (324-407)||(19571662-19571744)
chr8 (324-419)||(31030525-31030619)
chr8 (318-377)||(13584341-13584400)
chr8 (317-407)||(28564837-28564927)
chr8 (317-407)||(28572460-28572550)
chr8 (327-370)||(32015700-32015743)
chr8 (310-403)||(24673345-24673438)
chr8 (318-404)||(19954262-19954348)
chr8 (318-403)||(4544271-4544356)
chr8 (302-411)||(29220240-29220347)
chr8 (318-402)||(19949808-19949892)
chr8 (339-398)||(2469986-2470044)
chr8 (326-407)||(7902561-7902642)
chr8 (326-360)||(15951584-15951618)
chr8 (312-404)||(5883983-5884074)
chr8 (327-419)||(17955793-17955884)
chr8 (331-419)||(21644085-21644172)
chr8 (327-419)||(24884712-24884803)
chr8 (327-419)||(42514378-42514469)
chr8 (304-343)||(12820324-12820363)
chr8 (265-324)||(28565268-28565327)
chr8 (265-324)||(28572891-28572950)
chr8 (327-370)||(32010538-32010581)
chr8 (319-357)||(34818764-34818802)
chr8 (319-357)||(37771703-37771741)
chr8 (303-368)||(13149709-13149773)
chr8 (325-404)||(17793450-17793529)
chr8 (356-419)||(27415539-27415602)
chr8 (318-370)||(43999282-43999334)
[»] chr3 (66 HSPs)
chr3 (96-419)||(7571222-7571547)
chr3 (151-419)||(3692439-3692707)
chr3 (57-419)||(23661468-23661818)
chr3 (121-419)||(18471799-18472096)
chr3 (145-419)||(8887745-8888019)
chr3 (252-419)||(23666127-23666294)
chr3 (252-419)||(24038375-24038542)
chr3 (253-419)||(3672509-3672675)
chr3 (254-419)||(39775732-39775897)
chr3 (203-419)||(12965877-12966092)
chr3 (253-419)||(8883093-8883259)
chr3 (259-419)||(758372-758532)
chr3 (254-419)||(8069603-8069768)
chr3 (254-419)||(18467149-18467314)
chr3 (253-419)||(3418917-3419084)
chr3 (251-413)||(20519975-20520137)
chr3 (254-419)||(14438699-14438864)
chr3 (254-419)||(29350164-29350329)
chr3 (259-411)||(3033573-3033725)
chr3 (256-419)||(49971428-49971591)
chr3 (254-376)||(27708803-27708924)
chr3 (276-419)||(32474684-32474825)
chr3 (203-419)||(12112645-12112873)
chr3 (256-411)||(29715570-29715725)
chr3 (257-419)||(55431242-55431404)
chr3 (254-413)||(3657250-3657409)
chr3 (304-411)||(12971645-12971752)
chr3 (252-370)||(2207760-2207878)
chr3 (303-414)||(28125090-28125200)
chr3 (166-308)||(6606772-6606914)
chr3 (318-419)||(26962050-26962150)
chr3 (324-419)||(13022024-13022118)
chr3 (319-375)||(25726841-25726897)
chr3 (324-407)||(33089359-33089441)
chr3 (318-404)||(48432398-48432484)
chr3 (245-303)||(16013635-16013693)
chr3 (318-370)||(15768243-15768295)
chr3 (324-419)||(20810369-20810463)
chr3 (324-419)||(38436995-38437089)
chr3 (324-407)||(53119524-53119606)
chr3 (327-370)||(15763082-15763125)
chr3 (327-370)||(20090714-20090757)
chr3 (327-370)||(20095839-20095882)
chr3 (327-419)||(3476950-3477041)
chr3 (327-419)||(17368719-17368810)
chr3 (327-419)||(34129173-34129264)
chr3 (324-419)||(2617260-2617355)
chr3 (327-370)||(17364063-17364106)
chr3 (353-419)||(27708959-27709025)
chr3 (318-411)||(27605147-27605240)
chr3 (329-370)||(10321444-10321485)
chr3 (303-419)||(19276924-19277040)
chr3 (327-419)||(54270644-54270735)
chr3 (327-419)||(55128790-55128881)
chr3 (318-404)||(48435847-48435933)
chr3 (327-370)||(17357836-17357879)
chr3 (327-370)||(30341896-30341939)
chr3 (329-383)||(1688926-1688980)
chr3 (326-356)||(21494369-21494399)
chr3 (324-362)||(53358239-53358277)
chr3 (327-368)||(3482477-3482518)
chr3 (324-357)||(10586248-10586281)
chr3 (318-370)||(4117652-4117704)
chr3 (318-370)||(6024110-6024162)
chr3 (318-358)||(7806616-7806656)
chr3 (345-419)||(16013724-16013799)
[»] chr2 (50 HSPs)
chr2 (98-419)||(9180728-9181052)
chr2 (97-413)||(30650695-30651014)
chr2 (96-419)||(25478301-25478624)
chr2 (205-419)||(10160728-10160942)
chr2 (206-419)||(30658141-30658354)
chr2 (254-419)||(1934997-1935162)
chr2 (254-419)||(9189807-9189972)
chr2 (254-419)||(19892470-19892635)
chr2 (254-419)||(31326665-31326830)
chr2 (254-419)||(18344357-18344522)
chr2 (254-419)||(35601848-35602013)
chr2 (260-405)||(28603230-28603375)
chr2 (254-419)||(7737855-7738020)
chr2 (254-419)||(35639001-35639166)
chr2 (253-420)||(42926762-42926930)
chr2 (254-419)||(12796851-12797016)
chr2 (254-419)||(29677308-29677472)
chr2 (254-419)||(30631505-30631670)
chr2 (254-419)||(25497329-25497498)
chr2 (254-419)||(29677694-29677858)
chr2 (254-341)||(15489796-15489883)
chr2 (303-414)||(19578423-19578534)
chr2 (303-408)||(21523735-21523839)
chr2 (304-419)||(19094499-19094614)
chr2 (303-398)||(20711420-20711515)
chr2 (306-412)||(40847606-40847712)
chr2 (324-419)||(42914639-42914733)
chr2 (326-419)||(5089277-5089369)
chr2 (96-193)||(30655389-30655487)
chr2 (318-412)||(160031-160125)
chr2 (327-370)||(42723503-42723546)
chr2 (327-370)||(42728672-42728715)
chr2 (327-370)||(44096302-44096345)
chr2 (327-370)||(44754648-44754691)
chr2 (327-370)||(44759814-44759857)
chr2 (303-411)||(17545310-17545419)
chr2 (253-298)||(40847735-40847780)
chr2 (318-404)||(14104580-14104666)
chr2 (121-193)||(30618600-30618672)
chr2 (327-370)||(40518524-40518567)
chr2 (107-189)||(30628594-30628678)
chr2 (243-303)||(30628762-30628822)
chr2 (326-362)||(39542900-39542936)
chr2 (318-404)||(44957456-44957542)
chr2 (327-370)||(28751781-28751824)
chr2 (324-362)||(19538382-19538420)
chr2 (324-357)||(6297951-6297984)
chr2 (318-362)||(39542566-39542610)
chr2 (237-269)||(39542652-39542684)
chr2 (237-269)||(39542825-39542857)
[»] scaffold0045 (1 HSPs)
scaffold0045 (45-419)||(82779-83157)
[»] chr7 (53 HSPs)
chr7 (100-413)||(8268063-8268378)
chr7 (254-419)||(4930158-4930324)
chr7 (251-419)||(9650971-9651140)
chr7 (206-419)||(13314240-13314453)
chr7 (264-419)||(26341135-26341290)
chr7 (254-419)||(8075975-8076141)
chr7 (138-396)||(30256665-30256922)
chr7 (275-419)||(44510681-44510825)
chr7 (203-419)||(10388371-10388596)
chr7 (253-419)||(44423141-44423308)
chr7 (257-406)||(42627214-42627364)
chr7 (304-419)||(4579484-4579599)
chr7 (304-419)||(23246937-23247052)
chr7 (174-419)||(21671030-21671286)
chr7 (260-410)||(27238173-27238324)
chr7 (325-419)||(23866065-23866159)
chr7 (303-413)||(3357642-3357752)
chr7 (307-413)||(29150913-29151019)
chr7 (254-419)||(3879922-3880089)
chr7 (303-419)||(12254054-12254170)
chr7 (311-398)||(16372381-16372467)
chr7 (310-419)||(25543366-25543475)
chr7 (254-398)||(26287183-26287339)
chr7 (303-414)||(15642209-15642320)
chr7 (307-398)||(9008142-9008233)
chr7 (324-419)||(24528351-24528445)
chr7 (324-419)||(9973459-9973553)
chr7 (327-370)||(33238002-33238045)
chr7 (327-370)||(47998975-47999018)
chr7 (341-402)||(29478176-29478236)
chr7 (327-419)||(16539416-16539507)
chr7 (327-419)||(16626155-16626246)
chr7 (329-370)||(33226416-33226457)
chr7 (327-419)||(42571945-42572036)
chr7 (171-263)||(19640102-19640193)
chr7 (324-419)||(28292507-28292600)
chr7 (327-370)||(21081093-21081136)
chr7 (327-370)||(32212706-32212749)
chr7 (327-370)||(33243179-33243222)
chr7 (327-370)||(47177171-47177214)
chr7 (327-370)||(47993800-47993843)
chr7 (327-419)||(2234634-2234725)
chr7 (352-419)||(6590987-6591054)
chr7 (318-403)||(6898376-6898461)
chr7 (327-370)||(12934397-12934440)
chr7 (327-370)||(17495403-17495446)
chr7 (327-370)||(17557768-17557811)
chr7 (327-370)||(22857739-22857782)
chr7 (327-362)||(43892858-43892893)
chr7 (253-299)||(3045489-3045534)
chr7 (254-296)||(3284660-3284702)
chr7 (98-148)||(21670968-21671020)
chr7 (324-357)||(27256239-27256272)
[»] scaffold0352 (1 HSPs)
scaffold0352 (249-419)||(7025-7195)
[»] scaffold0182 (1 HSPs)
scaffold0182 (254-419)||(9891-10056)
[»] scaffold0002 (2 HSPs)
scaffold0002 (254-419)||(4000-4165)
scaffold0002 (253-407)||(443960-444102)
[»] chr6 (58 HSPs)
chr6 (251-419)||(6407864-6408032)
chr6 (253-419)||(8747707-8747873)
chr6 (266-419)||(11570753-11570906)
chr6 (166-409)||(25316580-25316827)
chr6 (166-409)||(26204074-26204321)
chr6 (254-398)||(19674239-19674383)
chr6 (256-419)||(12688899-12689062)
chr6 (280-419)||(2700110-2700249)
chr6 (252-419)||(21308958-21309122)
chr6 (254-419)||(33687607-33687772)
chr6 (254-365)||(11534736-11534847)
chr6 (254-365)||(11560246-11560357)
chr6 (260-376)||(11427975-11428091)
chr6 (240-419)||(29892265-29892455)
chr6 (303-419)||(20748288-20748404)
chr6 (303-419)||(11614096-11614212)
chr6 (307-410)||(12406366-12406469)
chr6 (304-419)||(24589168-24589283)
chr6 (275-413)||(14508931-14509069)
chr6 (307-419)||(13736682-13736794)
chr6 (257-319)||(17964634-17964696)
chr6 (323-419)||(12183004-12183100)
chr6 (324-413)||(19478145-19478233)
chr6 (110-263)||(15991901-15992054)
chr6 (110-263)||(15999563-15999716)
chr6 (348-419)||(16836160-16836231)
chr6 (324-419)||(3901909-3902004)
chr6 (324-419)||(13605096-13605190)
chr6 (348-419)||(17964563-17964634)
chr6 (339-404)||(35129640-35129704)
chr6 (327-419)||(34142080-34142171)
chr6 (327-419)||(34154696-34154787)
chr6 (327-414)||(21401755-21401841)
chr6 (323-413)||(5600982-5601072)
chr6 (327-370)||(22698295-22698338)
chr6 (310-368)||(2760297-2760355)
chr6 (311-357)||(2882821-2882867)
chr6 (304-357)||(2863518-2863571)
chr6 (324-412)||(10642706-10642794)
chr6 (310-419)||(22609556-22609659)
chr6 (327-419)||(31981560-31981651)
chr6 (304-376)||(9751857-9751928)
chr6 (314-413)||(22695281-22695380)
chr6 (327-370)||(21396699-21396742)
chr6 (327-370)||(24191435-24191478)
chr6 (327-370)||(24192532-24192575)
chr6 (324-362)||(11956762-11956800)
chr6 (347-404)||(32815082-32815138)
chr6 (327-419)||(29491241-29491332)
chr6 (251-303)||(15991829-15991881)
chr6 (251-303)||(15999491-15999543)
chr6 (243-303)||(22609470-22609530)
chr6 (327-370)||(34375919-34375962)
chr6 (324-370)||(17281616-17281662)
chr6 (327-360)||(6728397-6728430)
chr6 (259-300)||(13736814-13736855)
chr6 (302-335)||(19995439-19995472)
chr6 (339-383)||(14041703-14041747)
[»] scaffold0012 (1 HSPs)
scaffold0012 (254-419)||(166090-166256)
[»] scaffold0057 (1 HSPs)
scaffold0057 (252-419)||(35558-35725)
[»] scaffold0054 (1 HSPs)
scaffold0054 (252-419)||(25323-25490)
[»] scaffold0240 (1 HSPs)
scaffold0240 (104-419)||(3750-4082)
[»] scaffold0008 (1 HSPs)
scaffold0008 (303-419)||(255792-255908)
[»] scaffold0097 (1 HSPs)
scaffold0097 (303-398)||(15259-15354)
[»] scaffold2020 (1 HSPs)
scaffold2020 (254-419)||(283-462)
[»] scaffold0009 (1 HSPs)
scaffold0009 (254-419)||(165033-165212)
[»] scaffold0132 (2 HSPs)
scaffold0132 (324-419)||(2776-2870)
scaffold0132 (324-419)||(10736-10830)
[»] scaffold0011 (3 HSPs)
scaffold0011 (324-419)||(1562-1656)
scaffold0011 (324-419)||(7043-7137)
scaffold0011 (331-376)||(155542-155587)
[»] scaffold0018 (1 HSPs)
scaffold0018 (318-404)||(171734-171820)
[»] scaffold0067 (1 HSPs)
scaffold0067 (324-370)||(34021-34067)
[»] scaffold0055 (1 HSPs)
scaffold0055 (327-370)||(3058-3101)
[»] scaffold0052 (1 HSPs)
scaffold0052 (327-370)||(81434-81477)
[»] scaffold0184 (1 HSPs)
scaffold0184 (310-411)||(2291-2391)
[»] scaffold0060 (2 HSPs)
scaffold0060 (318-419)||(37001-37101)
scaffold0060 (171-231)||(48081-48141)
[»] scaffold0594 (1 HSPs)
scaffold0594 (327-419)||(9212-9303)
[»] scaffold0166 (2 HSPs)
scaffold0166 (327-419)||(13744-13835)
scaffold0166 (318-370)||(19250-19302)
[»] scaffold0014 (1 HSPs)
scaffold0014 (327-419)||(31545-31636)
[»] scaffold0517 (1 HSPs)
scaffold0517 (327-370)||(3563-3606)
[»] scaffold0330 (1 HSPs)
scaffold0330 (104-231)||(19732-19863)
[»] scaffold0020 (1 HSPs)
scaffold0020 (319-357)||(1291-1329)


Alignment Details
Target: chr4 (Bit Score: 248; Significance: 1e-137; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 50 - 419
Target Start/End: Original strand, 31273242 - 31273612
Alignment:
Q  50 aattttctatccacaattaatttcacgttttaccattgaaagcgat-tgtgaattttttagtgttgttgtttacaacaagcacttcgttgtttcagtcga 148  Q
    |||||||||||||||||||| | |||  ||||| | | |||| ||| |||||||||  || |||||||||||| ||||||||||||||||||| ||| ||    
T  31273242 aattttctatccacaattaactccacactttacaaataaaagggatatgtgaatttcatactgttgttgtttaaaacaagcacttcgttgtttaagttga 31273341  T
Q  149 aggatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtctt 248  Q
    |||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| || || || ||||||||||    
T  31273342 aggatgtaattctatgacttgatttatccttcatgtatgtagggacaattgaagctcaacaagtaacttcttcggtagacgtagcagattgaaacgtctt 31273441  T
Q  249 aaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct 348  Q
    |||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31273442 aaaattgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct 31273541  T
Q  349 ctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  31273542 ctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 31273612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 96 - 419
Target Start/End: Complemental strand, 37260205 - 37259881
Alignment:
Q  96 tgtgaattttttagtgttgttgtttacaacaagcacttcgttgt-ttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggat 194  Q
    |||||||||  ||||||||||||||| |||||||||||||| |  ||| | |    |||||| ||||||  ||||||||||||||||||||||||||||     
T  37260205 tgtgaatttcatagtgttgttgtttataacaagcacttcgtcgcgttcggccattagatgtatttctatagcttgatttatccttcttgtatttagggac 37260106  T
Q  195 aattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttcca 294  Q
    ||||||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  37260105 aattgaagctcaacaagtaacttcttcagtagacataacataatgaaacgtcttaaaattgttgtttttgaatttccaaactgttgtatttggatttcca 37260006  T
Q  295 aattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagact 394  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||| ||| ||||||    
T  37260005 aattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctttctttaagacgtttcgtggcactactcaaaattgtgcaaggcagact 37259906  T
Q  395 atcanccacgccgcctccagaataa 419  Q
    |||| ||||||||||||||| ||||    
T  37259905 atcaaccacgccgcctccaggataa 37259881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 121 - 419
Target Start/End: Original strand, 51697707 - 51698008
Alignment:
Q  121 acaacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaataagtaacttctt 220  Q
    ||||||||||||||||  ||||| ||||| |||||||||||||  ||||||||| ||||  |||||||||||| || | || ||||||||| ||||||||    
T  51697707 acaacaagcacttcgtcatttcactcgaaagatgtaattctatagcttgatttaaccttaatgtatttagggacaacttaacctcaataag-aacttctt 51697805  T
Q  221 cggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattc----tattatctaccgaagtt 316  Q
    ||||||||||||||||||||||  |||||||||| |||||||| ||||| |||| | ||||||||||||||||||||||    |||||||||||||||||    
T  51697806 cggtagacataacatatagaaatatcttaaaattattgtttttggattttcaaactattgtatttggatttccaaattcattctattatctaccgaagtt 51697905  T
Q  317 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaa 416  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| || |||||| ||| |||||| ||| |||||||||| ||||||||||||||| |    
T  51697906 gttactaggttgagtcacgaccagatcgctctttttaagacgtttcatgacactgctcaaaattgtgcaaggcagactatcaaccacgccgcctccagga 51698005  T
Q  417 taa 419  Q
    |||    
T  51698006 taa 51698008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 166 - 419
Target Start/End: Original strand, 19106459 - 19106710
Alignment:
Q  166 cttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttag 265  Q
    ||||||||||| |||||||||||||||| || |||| || ||||||||| ||||||||||  ||||||||| |||||||| ||||||||||||||||| |    
T  19106459 cttgatttatcattcttgtatttagggacaactgaaccttaataagtaaattcttcggta--cataacataaagaaacgtattaaaattgttgtttttgg 19106556  T
Q  266 atttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 365  Q
    |||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||||||||||| |     
T  19106557 attttcaaattgctgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacaagcagatcgctttctttaagacgtttcata 19106656  T
Q  366 gcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||| |||||| ||| | |||||||| ||||| ||||||||||||||    
T  19106657 gcactgcccaaaattgtgcaaggctgactatcaaccacgtcgcctccagaataa 19106710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 252 - 419
Target Start/End: Complemental strand, 5271588 - 5271423
Alignment:
Q  252 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 351  Q
    |||||||||||| |||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5271588 attgttgtttttggatttccaaactgtt--atttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 5271491  T
Q  352 taagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  5271490 taagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 5271423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 256 - 419
Target Start/End: Original strand, 31268962 - 31269125
Alignment:
Q  256 ttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 355  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31268962 ttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 31269061  T
Q  356 acgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||| || |||||| ||| |||||||||| ||||||||||||||| ||||    
T  31269062 acgtttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 31269125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 252 - 419
Target Start/End: Complemental strand, 37264735 - 37264568
Alignment:
Q  252 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 351  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37264735 attgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctt 37264636  T
Q  352 taagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||| ||| || ||| |||||||||| ||||||||||||||| ||||    
T  37264635 taagacgtttcgtggcactgcccaaaattatgcaaggcagactatcaaccacgccgcctccaggataa 37264568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 251 - 419
Target Start/End: Complemental strand, 13522165 - 13521996
Alignment:
Q  251 aattgttgtttttagatttccaaaatgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 349  Q
    ||||||||||||| ||||| |||| |||||||||| || |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  13522165 aattgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 13522066  T
Q  350 tttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  13522065 tttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 13521996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 253 - 419
Target Start/End: Complemental strand, 12824065 - 12823899
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  12824065 ttgttgttttttgatttctaaactgttgtatttggatttccaaattctattttctaccgaagttgttattaggttgagtcatgaccaggtcgctctcttt 12823966  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||| |||||||||||||||||| |||||| |||||| ||||||| ||||||||||||||| ||||    
T  12823965 aagacatttcgtggcactgcccaaaattgtgcaagacaaactatcaaccacgccgcctccaggataa 12823899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 239 - 419
Target Start/End: Complemental strand, 32082274 - 32082095
Alignment:
Q  239 gaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgacc 338  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32082274 gaaacgtcttaaaattgttgtttttggatttccaaactgttgtatttggatttccaaattctattatcaaccgaagttgttactaggttgagtcacgacc 32082175  T
Q  339 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    || || |||| |||||||| |||| |||||||| |||| |||||| ||| || ||||||| ||||||||||||||| ||||    
T  32082174 agatcactctttttaagacatttcatggcactgtccaaaattgtgcaaggca-actatcaaccacgccgcctccaggataa 32082095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 5928388 - 5928223
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5928388 tgttgtttttagatttccaaactgttgtatttggagtttcaaattctattatctaccgaagttgttaccaggttgagtcacgaccaggtcgctctcttta 5928289  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||| |||| |||||||||| ||| |||||| ||| |||||||||| |||| |||||||||| ||||    
T  5928288 agatgtttagtggcactgctcaaaattgtgcaaggcagactatcaaccacaccgcctccaggataa 5928223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 254 - 411
Target Start/End: Original strand, 8693637 - 8693794
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8693637 tgttgtttttggattttcaaactgttgtatttggatttccaaattctattgtctatcgaagttgttactaggttgagtcacgaccaggtcgctctcttta 8693736  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctc 411  Q
    |||||||||||||| || ||||| |||||| |||||| ||||||| ||||||||||||    
T  8693737 agacgtttcgtggcgctacccaaaattgtgcaagacatactatcaaccacgccgcctc 8693794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 16420956 - 16421120
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16420956 tgttgtttttggatttccaaactgttgtatttagatttccaa-ttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcatta 16421054  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||| |||||||||||||||||| |||||| ||| |||||||||| ||||||||||| ||| ||||    
T  16421055 agacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctacaggataa 16421120  T

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Target: chr4; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 251 - 419
Target Start/End: Original strand, 55251644 - 55251810
Alignment:
Q  251 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 350  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||| |    
T  55251644 aattgttgtttttcgatttccaaactgttgtatttggatttccaa-ttctattatctattgaagttgttactaggttgagtcacgaccaggtcgctct-t 55251741  T
Q  351 ttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||| ||||||| ||||    
T  55251742 ttaagacgtttcgtggcactgtccaaaattgtgcaagacagactatcaaccacgccacctccaggataa 55251810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 203 - 357
Target Start/End: Complemental strand, 32221317 - 32221163
Alignment:
Q  203 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 302  Q
    |||||||||||| |||||||||||||||| || || ||| | ||||||||||||||||||| ||||| |||| |||||||||||||||| ||||||||||    
T  32221317 ctcaataagtaatttcttcggtagacatagcagatcgaaccatcttaaaattgttgtttttggattttcaaattgttgtatttggattttcaaattctat 32221218  T
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 357  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32221217 tatctaccgaaattgttactaggttgagtcacgaccaggtcgctctctttaagac 32221163  T

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Target: chr4; HSP #16
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 276 - 419
Target Start/End: Original strand, 13059358 - 13059501
Alignment:
Q  276 tgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgccca 375  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||  |    
T  13059358 tgttgtatttggattttcaaattctattatctaccgaagttattactaggttgagtcatgaccagatcgctctctttaagacgtttcgtggcactgcata 13059457  T
Q  376 agattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    | |||||| |||||||||||||| |||| ||||||| |||||||    
T  13059458 aaattgtgcaagacagactatcaaccactccgcctctagaataa 13059501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 276 - 419
Target Start/End: Original strand, 31765830 - 31765977
Alignment:
Q  276 tgttgtatttggatttccaaattctatta----tctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactg 371  Q
    |||||| ||||||||||||||||||||||    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  31765830 tgttgtttttggatttccaaattctattaattatctaccgaagttgttactaggttgagtcacaaccaggtcactctctttaagacgtttcgtggcactg 31765929  T
Q  372 cccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  31765930 cccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 31765977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 259 - 413
Target Start/End: Complemental strand, 33469137 - 33468983
Alignment:
Q  259 tttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 358  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  33469137 tttttggatttccaaactgttgtatttggattttcaaattctattatctactgaagttgttactaggttgagtcacgactaggtcgttctctttaagacg 33469038  T
Q  359 tttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctcca 413  Q
    ||| ||||||||||||||  ||||| ||| |||||| ||| ||||||| ||||||    
T  33469037 ttttgtggcactgcccaaagttgtgcaaggcagactgtcaaccacgccacctcca 33468983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 8030645 - 8030480
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    ||||||||||  |||| |||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||    
T  8030645 tgttgtttttgaattttcaaactgttgtatttgaattttcaaattctattatctaccgaagttgttactaggttgaatcacaatcaggtcgctctcttta 8030546  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||| |||||||||||||| |||||| |||| ||||||||| | |||| |||||||| ||||    
T  8030545 agacgttttgtggcactgcccaaaattgtgcaagatagactatcaacaacgctgcctccaggataa 8030480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 19101903 - 19102068
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||  ||| ||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||| ||||| |||| ||||    
T  19101903 tgttgtttttggatttataaactgttgtatttggatttccaaattctattatctatcaaagttgttactaggttaagtcacgacgaggtcactctgttta 19102002  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||| | ||| |||||| || ||||||||||| ||||| ||||||||| ||||    
T  19102003 agacgtttcgtggcactactcaaaattgtgcaaaacagactatcaaccacgtcgcctccaggataa 19102068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 266 - 419
Target Start/End: Original strand, 47244186 - 47244339
Alignment:
Q  266 atttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 365  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  47244186 atttctaaactgttgtatttggatttccaaattatattatctatcgaagttgttagtaggttgagtcacgatcaggtcgccctctttaagacgtttcgtg 47244285  T
Q  366 gcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||  ||| ||| | ||||| ||||||||| ||||||||||||||| ||||    
T  47244286 gcactgttcaaaattattgaagaaagactatcaaccacgccgcctccaggataa 47244339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 310 - 419
Target Start/End: Complemental strand, 42758868 - 42758759
Alignment:
Q  310 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcc 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||| ||||    
T  42758868 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgtcgcc 42758769  T
Q  410 tccagaataa 419  Q
    ||||||||||    
T  42758768 tccagaataa 42758759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 288 - 419
Target Start/End: Complemental strand, 33463491 - 33463360
Alignment:
Q  288 atttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaag 387  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||| |||    
T  33463491 atttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaag 33463392  T
Q  388 acagactatcanccacgccgcctccagaataa 419  Q
     |||| | ||| || |||||||||||| ||||    
T  33463391 gcagattgtcaaccccgccgcctccaggataa 33463360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 239 - 419
Target Start/End: Original strand, 12878138 - 12878330
Alignment:
Q  239 gaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt------------atctaccgaagttgttactaggt 326  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||| || ||||||||||||            |||||| ||||||||||||||||    
T  12878138 gaaacgtcttaaaattgttgtttttggatttccaaattgttatatttgggttcccaaattctattttgatagagaatatctacggaagttgttactaggt 12878237  T
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||| |||||||||||||||||||||||||||| ||||   ||| |||||| ||  ||||||||||  |||||| ||||||||||||    
T  12878238 tgagtcacgatcaggtcgctctctttaagacgtttcgtgacacttttcaaaattgtgcaaagcagactatcaatcacgccacctccagaataa 12878330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 271 - 419
Target Start/End: Original strand, 47574567 - 47574716
Alignment:
Q  271 caaaatgttgtatttggattt-ccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcac 369  Q
    |||| |||||||||| ||||| |||||||||||||||||||||| |||||| ||||||||||||| | ||||||||||||||||||||||||| || |||    
T  47574567 caaactgttgtattttgattttccaaattctattatctaccgaatttgttattaggttgagtcacaatcaggtcgctctctttaagacgtttcttgacac 47574666  T
Q  370 tgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    | ||||| |||||| |||||| | |||||  |||||||| ||||| ||||    
T  47574667 tacccaaaattgtgcaagacaaaatatcaatcacgccgcatccaggataa 47574716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 260 - 398
Target Start/End: Original strand, 51696931 - 51697072
Alignment:
Q  260 ttttagatttccaaaatgttgtatttggatttccaaattc----tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 355  Q
    |||| |||||||||| | |||||||||||||| |||||||    ||||||||| | || ||||||||||||||||||||||||||||||||||| |||||    
T  51696931 ttttggatttccaaacttttgtatttggattttcaaattcattctattatctatcaaa-ttgttactaggttgagtcacgaccaggtcgctctccttaag 51697029  T
Q  356 acgtttcgtggcactgcccaagattgtggaagacagactatca 398  Q
    ||||||| ||||||||||||| |||||| ||| ||||||||||    
T  51697030 acgtttcatggcactgcccaaaattgtgcaaggcagactatca 51697072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 303 - 413
Target Start/End: Complemental strand, 13065888 - 13065778
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||  ||||| |||  ||||||||| |||    
T  13065888 tatctaccgaagttgttactaggttgagtcacgactatgtcgctctctttaagacgtttcatggcactgcccaaagttgtgaaagggagactatcaacca 13065789  T
Q  403 cgccgcctcca 413  Q
    ||| |||||||    
T  13065788 cgcagcctcca 13065778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 419
Target Start/End: Original strand, 19906210 - 19906342
Alignment:
Q  287 gatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaa 386  Q
    ||||| |||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||| |||||||||||  ||| ||||| | || |||||| ||    
T  19906210 gattttcaaattttattatctaccgaagttattattaggttgagtcacgatcaggtcgctctttttaagacgttcagtgacactgtctaaaattgtgcaa 19906309  T
Q  387 gacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||| |  |||||||||||| ||||    
T  19906310 gacagactatcaactccgccgcctccaggataa 19906342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 251 - 419
Target Start/End: Complemental strand, 31729543 - 31729391
Alignment:
Q  251 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 350  Q
    ||||||||||||| |||||||||| || ||||||||||||||||| ||||||||||||| |||||                || || |||||||||||||    
T  31729543 aattgttgtttttggatttccaaactgctgtatttggatttccaagttctattatctactgaagt----------------catgatcaggtcgctctct 31729460  T
Q  351 ttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| ||||| |||||| ||| ||||| ||||  |||||||||||||| ||||    
T  31729459 ttaagacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaatcacgccgcctccaggataa 31729391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 419
Target Start/End: Original strand, 2819818 - 2819935
Alignment:
Q  302 ttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancc 401  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| | ||||||||| ||||||||| |||| |||| |||||| |||  ||||||||  ||    
T  2819818 ttatctatcgaagttgttactagattgagtcacgaccaggtcgttttctttaagatgtttcgtggtactgtccaaaattgtgcaaggtagactatctacc 2819917  T
Q  402 acgccgcctccagaataa 419  Q
    | ||||| ||||| ||||    
T  2819918 atgccgcgtccaggataa 2819935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 48276807 - 48276653
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||| ||||| |||||  ||| ||||||||||||||||||||||||    ||||||| |||||  ||||||||||| |||||| ||||||||||||||||    
T  48276807 tgttctttttggatttttaaattgttgtatttggatttccaaattc----atctacccaagtt--tactaggttgaatcacgatcaggtcgctctcttta 48276714  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||| || ||||||  ||| ||||||     || ||||||| ||||||||||||||| ||||    
T  48276713 agacgttttgttgcactgttcaaaattgtg-----caaactatcaaccacgccgcctccaggataa 48276653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 10120913 - 10120813
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaat 417  Q
    |||| |||||||||||||| |||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| || |||||||| |||||| ||    
T  10120913 ttaccaggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggat 10120815  T
Q  418 aa 419  Q
    ||    
T  10120814 aa 10120813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 419
Target Start/End: Original strand, 12874514 - 12874630
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    ||||||| |||||||||| ||||||||||||| | ||| ||||||||||||||||  |||||||||||| | || |||||| ||  ||||| ||||  ||    
T  12874514 tatctactgaagttgttattaggttgagtcacaatcagatcgctctctttaagacaattcgtggcactgtctaaaattgtgcaaagcagaccatcaatca 12874613  T
Q  403 cgccgcctccagaataa 419  Q
    |||||||||||| ||||    
T  12874614 cgccgcctccaggataa 12874630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 55810315 - 55810257
Alignment:
Q  255 gttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaa 313  Q
    ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  55810315 gttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaa 55810257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 653043 - 653134
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||  ||||| |||  |||||| || |||||||| |||||| ||||    
T  653043 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaa-tttgtgcaaggtagactaacaaccacgccgtctccaggataa 653134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 409
Target Start/End: Complemental strand, 1151411 - 1151312
Alignment:
Q  310 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcc 409  Q
    ||||||||||||||||||||||| ||| ||| || |||||||||||||||||| || ||||  |||| |||||| |||||  |||||||  |||||||||    
T  1151411 cgaagttgttactaggttgagtcgcgatcagatcactctctttaagacgtttcatgacactatccaaaattgtgcaagactaactatcaatcacgccgcc 1151312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 419
Target Start/End: Original strand, 4550973 - 4551088
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    |||||| |||||||||||||||||||||||| ||  |||||| ||  |||||||| |||  || |||||| |||  ||||| |||||||||||||| | |    
T  4550973 tatctatcgaagttgttactaggttgagtcatgattaggtcgttc-atttaagacattttatgccactgctcaaagttgtgcaagacagactatcaacta 4551071  T
Q  403 cgccgcctccagaataa 419  Q
    |||||||||||| ||||    
T  4551072 cgccgcctccaggataa 4551088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 404
Target Start/End: Original strand, 32545068 - 32545171
Alignment:
Q  302 ttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcc-caagattgtg-gaagacagactatcan 399  Q
    |||||||| |||||||||||||||||||||||||| ||||||  ||| ||||||| |||||||||||| |||  || ||||||  ||||||||||||||     
T  32545068 ttatctactgaagttgttactaggttgagtcacgatcaggtcaatct-tttaagatgtttcgtggcaccgcctaaaaattgtgtcaagacagactatcaa 32545166  T
Q  400 ccacg 404  Q
    |||||    
T  32545167 ccacg 32545171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 368
Target Start/End: Original strand, 6070563 - 6070627
Alignment:
Q  304 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggca 368  Q
    ||||||| ||||||||||||| |||||||| |||||| ||||||||||||||| ||||| |||||    
T  6070563 atctaccaaagttgttactagattgagtcatgaccagatcgctctctttaagatgtttcctggca 6070627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 410
Target Start/End: Complemental strand, 19541269 - 19541174
Alignment:
Q  315 ttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcct 410  Q
    |||||||||||||||||||||| ||| ||| ||| |||||||  |||||||||| ||   || |||||  |||||||||||||| |||||||||||    
T  19541269 ttgttactaggttgagtcacgatcagatcgttctttttaagatatttcgtggcattgtttaaaattgtacaagacagactatcaaccacgccgcct 19541174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 39319481 - 39319572
Alignment:
Q  171 tttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgttttt 263  Q
    ||||||||||||||||||||| | |||  || |||||||||||| || ||||||||||||| ||  | ||||| |||||||||||||||||||    
T  39319481 tttatccttcttgtatttaggaacaatgaaacctcaataagtaattttttcggtagacatagca-gtcgaaacatcttaaaattgttgttttt 39319572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 302
Target Start/End: Complemental strand, 8652192 - 8652129
Alignment:
Q  240 aaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttgga-tttccaaattctat 302  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||| || ||||||||||||||    
T  8652192 aaacgtcttaaatttgttgtttttggatttccaaactgttgtattttgattttccaaattctat 8652129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 302
Target Start/End: Complemental strand, 8663999 - 8663936
Alignment:
Q  240 aaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttgga-tttccaaattctat 302  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||| || ||||||||||||||    
T  8663999 aaacgtcttaaatttgttgtttttggatttccaaactgttgtattttgattttccaaattctat 8663936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 258
Target Start/End: Original strand, 16947721 - 16947886
Alignment:
Q  96 tgtgaattttttagtgttgttgttt---acaacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttaggg 192  Q
    ||||||| | |||||||||||||||   |||||||| ||||| |  ||| ||| |||  ||||| || |||  |||||||||||||| ||||||||||||    
T  16947721 tgtgaatatcttagtgttgttgtttgaaacaacaagtacttcatcatttaagtagaataatgtatttatatagcttgatttatccttattgtatttaggg 16947820  T
Q  193 ataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttg 258  Q
    | ||   || |||||||| ||| || ||||||| |||||| | |  ||||||||||||||||||||    
T  16947821 agaacataatctcaataaataattttttcggtacacataataaaaggaaacgtcttaaaattgttg 16947886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 36354176 - 36354219
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  36354176 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 36354219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 36359294 - 36359337
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  36359294 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 36359337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 39999069 - 39999112
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  39999069 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 39999112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 40004027 - 40004070
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  40004027 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 40004070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 54343203 - 54343246
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  54343203 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 54343246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 54348357 - 54348400
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  54348357 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 54348400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 339 - 404
Target Start/End: Original strand, 20513118 - 20513182
Alignment:
Q  339 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||| ||| |||||||||| |||||    
T  20513118 aggtcgctctctttaagatgtttcgtggcactgctcaaaattgtgcaag-cagactatcaaccacg 20513182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 8980380 - 8980289
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  8980380 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 8980289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 8985500 - 8985409
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  8985500 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 8985409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 13700510 - 13700601
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  13700510 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 13700601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 21299928 - 21299837
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  21299928 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 21299837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 41393245 - 41393336
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  41393245 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 41393336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 51019468 - 51019377
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  51019468 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 51019377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 389
Target Start/End: Complemental strand, 52691158 - 52691089
Alignment:
Q  320 actaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagac 389  Q
    ||||||||||||||||| ||  |||||||||||||||||||| ||| | |||||||| |||||| |||||    
T  52691158 actaggttgagtcacgatcatatcgctctctttaagacgttttgtgactctgcccaaaattgtgcaagac 52691089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 53797629 - 53797720
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || || |||||| |||  |||||| || || ||||| |||||| ||||    
T  53797629 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 53797720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 54991486 - 54991577
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  54991486 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 54991577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 24490028 - 24490123
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||| |||||||||||||||||||||| | ||||   |||| ||||| |||  |||||| || || |||| ||||||| ||||    
T  24490028 ggttgagtcacgaccagatcgctctctttaagacgtttcgcgacactaatcaagtttgtgcaaggtagactaacaaccgcgccacctccaggataa 24490123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 404
Target Start/End: Complemental strand, 16596017 - 16595953
Alignment:
Q  339 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||| ||| |||||| ||| |||||    
T  16596017 aggtcgctctctttaagacgttttgtggcactgtccaaaattgtgcaag-cagactgtcaaccacg 16595953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 419
Target Start/End: Original strand, 16953107 - 16953176
Alignment:
Q  350 tttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||| ||| ||||| |||||| ||| |||||||||| ||||  ||||||||| ||||    
T  16953107 tttaagacgtttcgtggtactacccaaaattgtgcaaggcagactatcaaccacaacgcctccaggataa 16953176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 413
Target Start/End: Complemental strand, 8083121 - 8083037
Alignment:
Q  329 agtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctcca 413  Q
    |||||||| |||||||||||||||||||||||||  ||||||  ||||| | ||| |||  |||||| || || |||||||||||    
T  8083121 agtcacgatcaggtcgctctctttaagacgtttcacggcactatccaagttagtgcaaggtagactaacaaccgcgccgcctcca 8083037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 13695159 - 13695250
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| ||||||||| |||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  13695159 tgagtcacgaccaggtcgctttctttaagatgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 13695250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 21305048 - 21304957
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||| ||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  21305048 tgagtcacgaccaggtcgctttctttaagacttttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 21304957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 47046402 - 47046311
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||| | |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  47046402 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 47046311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 363
Target Start/End: Complemental strand, 10318878 - 10318839
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcg 363  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  10318878 ggttgagtcacgaccatgtcgctctctttaagacatttcg 10318839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 303
Target Start/End: Original strand, 23093112 - 23093155
Alignment:
Q  260 ttttagatttccaaaatgttgtatttggatttccaaattctatt 303  Q
    |||| |||||| ||| ||||||||||||||||||||||||||||    
T  23093112 ttttggatttcaaaactgttgtatttggatttccaaattctatt 23093155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 404
Target Start/End: Complemental strand, 15020549 - 15020485
Alignment:
Q  339 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    |||| ||||||||||| |||||||||| |||| ||||| |||||| || ||||||||||| |||||    
T  15020549 aggttgctctctttaaaacgtttcgtgacacttcccaaaattgtgcaa-acagactatcaaccacg 15020485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 383
Target Start/End: Complemental strand, 33723025 - 33722959
Alignment:
Q  318 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtg 383  Q
    |||||||| |||||| || || ||||| ||||||||||||||||||||| ||||| |||| ||||||    
T  33723025 ttactaggctgagtcgcggactaggtcactctctttaagacgtttcgtgacactgtccaaaattgtg 33722959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 362
Target Start/End: Original strand, 39319628 - 39319666
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttc 362  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  39319628 ggttgagtcacgatcaggtcgctttctttaagacgtttc 39319666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 372
Target Start/End: Original strand, 40408196 - 40408242
Alignment:
Q  326 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgc 372  Q
    |||||| ||||||||||| ||||||||||||||||| || |||||||    
T  40408196 ttgagttacgaccaggtcactctctttaagacgttttgtagcactgc 40408242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 13710669 - 13710759
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||| ||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  13710669 tgagtcacgaccag-tcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 13710759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 357
Target Start/End: Original strand, 34560494 - 34560527
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagac 357  Q
    ||||||||||||||||||||||| ||||||||||    
T  34560494 ggttgagtcacgaccaggtcgctttctttaagac 34560527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 356
Target Start/End: Complemental strand, 3998155 - 3998123
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaaga 356  Q
    ||||||||||||||||||||||| |||||||||    
T  3998155 ggttgagtcacgaccaggtcgctttctttaaga 3998123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 33463553 - 33463494
Alignment:
Q  204 tcaataagtaacttcttcggtagacataacatatag-aaacgtcttaaaattgttgttttt 263  Q
    |||||||||||  |||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  33463553 tcaataagtaatctctttggtagatataaca-ataggaaacgtcttaaaattgttgttttt 33463494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 246; Significance: 1e-136; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 96 - 412
Target Start/End: Complemental strand, 16649939 - 16649624
Alignment:
Q  96 tgtgaattttttagtgttgttgtttacaacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggata 195  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16649939 tgtgaatttgatagtgttgttgtttacaacaagcactttgttgtttcagttgaaggatgtaattctatgacttgatttatccttcttgtatttagggata 16649840  T
Q  196 attgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaa 295  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||||||    
T  16649839 attgaagctcaacaagtaacttcttcggtagacatagcatatagaaacgtcttaaaattgttgtttttggattttcaaactgttgtatttgaatttccaa 16649740  T
Q  296 attctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagacta 395  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| |||| ||||||    
T  16649739 attctattatctaccgaagttgttactaagttgagtcacgaccaggtcgctctctttaagacgttt-gtggcactgtccaaaattgtgcaagatagacta 16649641  T
Q  396 tcanccacgccgcctcc 412  Q
    ||| |||||||||||||    
T  16649640 tcaaccacgccgcctcc 16649624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 50 - 383
Target Start/End: Original strand, 25854895 - 25855226
Alignment:
Q  50 aattttctatccacaattaatttcacgttttaccattgaaagcgat-tgtgaattttttagtgttgttgtttacaacaagcacttcgttgtttcagtcga 148  Q
    |||||||||||||||||||| | |||  ||||| | |  ||| ||| |||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  25854895 aattttctatccacaattaactccacactttacaaatacaagggatatgtgaatttcatagtgttgttgtttacaacaagcacttcgttgtttcaatcga 25854994  T
Q  149 aggatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtctt 248  Q
    || ||||||||||||||||||||||||||||   ||||||| ||| ||||||||||||| ||||||||||| |||||||| || || || ||||||||||    
T  25854995 agaatgtaattctatgacttgatttatcctt---gtatttaaggacaattgaagctcaacaagtaacttctccggtagacgtagcagattgaaacgtctt 25855091  T
Q  249 aaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct 348  Q
    |||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25855092 aaaattgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct 25855191  T
Q  349 ctttaagacgtttcgtggcactgcccaagattgtg 383  Q
    |||||||||||||||||||||||||||| ||||||    
T  25855192 ctttaagacgtttcgtggcactgcccaaaattgtg 25855226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 26 - 413
Target Start/End: Complemental strand, 51041854 - 51041473
Alignment:
Q  26 aaactatgtgttgtgccgagagataattttctatccacaattaatttcacgttttaccattgaaagcgattg-tgaattttttagtgttgttgttt--ac 122  Q
    ||||| |||| ||||| |||| | |||||||||||||||||||| |||||  ||||||||| ||||||||   |||||||  |||||||| ||||   ||    
T  51041854 aaactgtgtgatgtgcggagaaacaattttctatccacaattaacttcacactttaccattaaaagcgatacatgaatttcatagtgttgctgttataac 51041755  T
Q  123 aacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcg 222  Q
    ||||| |||||| |||||||||||||  |||||| ||||||  |||  |||||||||  |||||||||||| || |||       |||||||||| ||||    
T  51041754 aacaaacacttcattgtttcagtcgatagatgtatttctatagcttattttatccttaatgtatttagggacaactga-------taagtaactttttcg 51041662  T
Q  223 gtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttact 322  Q
    ||||||||| || || ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  51041661 gtagacatagcagatcgaaacgtcttaaaattgttgtttttggatttccaaactgatgtatttggatttccaaattctattatctaccgaagttgttact 51041562  T
Q  323 aggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctcca 413  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||    
T  51041561 aagttgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgcccaa-attgtgcaaggcagactatcaaccacgccgcctcca 51041473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 100 - 411
Target Start/End: Original strand, 10139859 - 10140172
Alignment:
Q  100 aattttttagtgttgttgttta--caacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataat 197  Q
    ||||| |||||||||||||| |  ||||||||||||||| |||||||||||| |||||||||||||   |||||||||||||  |||||||||||| ||     
T  10139859 aatttcttagtgttgttgttgaaacaacaagcacttcgtcgtttcagtcgaaagatgtaattctatagtttgatttatccttaatgtatttagggacaac 10139958  T
Q  198 tgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaat 297  Q
    | || ||||||||| |||||||||||||||||||  | || |||||||||||||||||||||||||  ||| ||||| |  ||||||||||||| |||      
T  10139959 ttaacctcaataagcaacttcttcggtagacatagtagatcgaaacgtcttaaaattgttgtttttgtattcccaaactactgtatttggattttcaaga 10140058  T
Q  298 tctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatc 397  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||| |||||| ||| ||||| |||    
T  10140059 tctattatctaccgaagttgttactaggttgagtcacgatcaggtcgctctctttaacacgtttcgtggcactactcaaaattgtgcaaggcagacaatc 10140158  T
Q  398 anccacgccgcctc 411  Q
    | ||||||| ||||    
T  10140159 aaccacgccacctc 10140172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 244 - 413
Target Start/End: Complemental strand, 47451404 - 47451235
Alignment:
Q  244 gtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtc 343  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  47451404 gtcttaaaattgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaaattattactaggttgagtcacgaccaggtc 47451305  T
Q  344 gctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctcca 413  Q
    ||||||||||||||||||| |||||||||| || |||||| |||||||||||||| ||||||||||||||    
T  47451304 gctctctttaagacgtttcatggcactgccaaaaattgtgcaagacagactatcaaccacgccgcctcca 47451235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 247 - 411
Target Start/End: Original strand, 40165899 - 40166063
Alignment:
Q  247 ttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgct 346  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40165899 ttaaaattgttgtttttagattttcaaactgttgtatttggattaccatattctattatctaccgaagttgttactaggttgagtcacgaccatgtcgct 40165998  T
Q  347 ctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctc 411  Q
    |||||||||||||||||||||||||||||| |||||| ||| ||||||| || | ||||||||||    
T  40165999 ctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactaacaacaacgccgcctc 40166063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 253 - 419
Target Start/End: Complemental strand, 23192987 - 23192821
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    ||||||||||| ||||| |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23192987 ttgttgtttttggattttcaaactgttgtgtttggttttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 23192888  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||| |||||  ||| |||||||||| ||||||| ||||||| ||||    
T  23192887 aagacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgcctcctccaggataa 23192821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 249 - 419
Target Start/End: Complemental strand, 33301354 - 33301184
Alignment:
Q  249 aaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct 348  Q
    |||| |||||||||| |||||||||  ||||||||||||||||||||||||||||||||| | ||||||||||||| |||| |||||||||||||| |||    
T  33301354 aaaagtgttgtttttggatttccaatctgttgtatttggatttccaaattctattatctatcaaagttgttactagcttgaatcacgaccaggtcgttct 33301255  T
Q  349 ctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  33301254 ctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 33301184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 249 - 398
Target Start/End: Original strand, 3094034 - 3094184
Alignment:
Q  249 aaaattgttgtttttag-atttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctc 347  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3094034 aaaattgttgttttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctc 3094133  T
Q  348 tctttaagacgtttcgtggcactgcccaagattgtggaagacagactatca 398  Q
    ||||||||||||||| ||||||||||||| |||||| ||| ||||||||||    
T  3094134 tctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatca 3094184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 47455555 - 47455390
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  47455555 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttattaggttgagtcacgaccaggtcgctctcttta 47455456  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||| || |||| |||||| |||||||| ||||| ||||||||||||||| ||||    
T  47455455 agacgtttcgtggcaatgtccaaaattgtgcaagacagattatcaaccacgccgcctccaggataa 47455390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 19799182 - 19799017
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| ||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  19799182 tgttgtttttggattttcaaactgttgtatttggattttcaaattctattatctatcgaagttgttactaggttgagtcacgatcagatcgctctcttta 19799083  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||  |||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  19799082 agacgtttcgtggcactatccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 19799017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 252 - 411
Target Start/End: Complemental strand, 26927893 - 26927734
Alignment:
Q  252 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 351  Q
    |||||||||||| ||||| |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  26927893 attgttgtttttggattttcaaactgttgtatttggatttttaaattctattatctaccgaagttgttactaggttgagtcacgactaagtcgctctctt 26927794  T
Q  352 taagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctc 411  Q
    ||||||||||||||||| ||||||| |||||| ||| |||||||||| ||||||||||||    
T  26927793 taagacgtttcgtggcattgcccaaaattgtgcaaggcagactatcaaccacgccgcctc 26927734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 254 - 411
Target Start/End: Original strand, 10135382 - 10135539
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    ||||||||||  ||||||||| |  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10135382 tgttgtttttgtatttccaaactcctgtatttggatttccaagttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 10135481  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctc 411  Q
    ||||||||||||||||| || || |||||| ||| ||||| |||| ||||||||||||    
T  10135482 agacgtttcgtggcactacctaaaattgtgcaaggcagacaatcaaccacgccgcctc 10135539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 39588536 - 39588371
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| ||||||||||  |||||||||||||||||||||| ||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||    
T  39588536 tgttgtttttggatttccaaatagttgtatttggatttccaaattatattatccaccgaaattgttactaggttaagtcacgatcaggtcgctctcttta 39588437  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||| |||| |||||| |||||||||||||  |||||||  |||||| ||||    
T  39588436 agacgtttcgtggcactgtccaaaattgtgcaagacagactatctaccacgcctactccaggataa 39588371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 256 - 419
Target Start/End: Complemental strand, 18784716 - 18784553
Alignment:
Q  256 ttgtttttagatttccaaaatgttgtat-ttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaa 354  Q
    |||||||| |||||||||| |||||||| |||| |||| |||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| |||||    
T  18784716 ttgtttttggatttccaaactgttgtatgttggttttctaaattctattttctagcgaagttgttactaggttgagtcacgatcaggtcgctct-tttaa 18784618  T
Q  355 gacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||| ||||||||||||||| || |||||| ||| |||||||||| ||||||||||||||||||||    
T  18784617 gacatttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccagaataa 18784553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 252 - 419
Target Start/End: Original strand, 16035526 - 16035699
Alignment:
Q  252 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctat------tatctaccgaagttgttactaggttgagtcacgaccaggtcgc 345  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||||||       |||||||| ||||||||||||||||||||||||||||||||||    
T  16035526 attgttgtttttggatttccaaactgttgtatttggattttcaaattctaaaatgaatatctaccaaagttgttactaggttgagtcacgaccaggtcgc 16035625  T
Q  346 tctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
     |||||||| |||||||||||||||| ||||  ||||| |||||||| ||||| ||||||||||||||| ||||    
T  16035626 cctctttaacacgtttcgtggcactgtccaaagttgtgcaagacagattatcaaccacgccgcctccaggataa 16035699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 266 - 413
Target Start/End: Original strand, 38620631 - 38620777
Alignment:
Q  266 atttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 365  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||||| || ||||||||||||||||||||     
T  38620631 attttcaaactgttgtatttggatttccaaattttattatctaccgaagttattattaggttgagtcgcgaccagatcactctctttaagacgtttcgt- 38620729  T
Q  366 gcactgcccaagattgtggaagacagactatcanccacgccgcctcca 413  Q
    ||| || |||| |||||| ||| |||||||||| | ||||||||||||    
T  38620730 gcattgtccaaaattgtgcaaggcagactatcaactacgccgcctcca 38620777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 252 - 371
Target Start/End: Original strand, 16832025 - 16832144
Alignment:
Q  252 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 351  Q
    |||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||||||||    
T  16832025 attgttgtatttggatttccaaaccgttgtatttggatttccaaattctattatctacttaagttgttactatattgagtcacgaccaggtcgctctctt 16832124  T
Q  352 taagacgtttcgtggcactg 371  Q
    ||||||||| |||| |||||    
T  16832125 taagacgttccgtgacactg 16832144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 303 - 407
Target Start/End: Original strand, 12259971 - 12260075
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    ||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||| |||    
T  12259971 tatctactgaagttgttacttggttgagacacgaccatgtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaagacagactatcaacca 12260070  T
Q  403 cgccg 407  Q
    |||||    
T  12260071 cgccg 12260075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 254 - 337
Target Start/End: Original strand, 25843738 - 25843821
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgac 337  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25843738 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgac 25843821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 103 - 248
Target Start/End: Complemental strand, 47452214 - 47452066
Alignment:
Q  103 tttttagtgttgttgttt---acaacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataattg 199  Q
    ||||||||||||||||||   ||||||| ||| || | |||||||||||| |||||| || |||  |||||||||||||  |||||||||  ||||||||    
T  47452214 tttttagtgttgttgtttgaaacaacaatcacctcatcgtttcagtcgaatgatgtatttgtattgcttgatttatcctaattgtatttaaagataattg 47452115  T
Q  200 aagctcaataagtaacttcttcggtagacataacatatagaaacgtctt 248  Q
    || |||||||| |||||||||||||||||||| || |||||||||||||    
T  47452114 aacctcaataaataacttcttcggtagacatatcagatagaaacgtctt 47452066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 419
Target Start/End: Original strand, 11806334 - 11806450
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    |||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||| |||||||| |||||| |||  | ||  ||| |||||||||| |||    
T  11806334 tatctatcgaagttgttattaggttgagtcacaaccagatcgctctctttaagatgtttcgtgacactgcgcaaagtggtacaaggcagactatcaacca 11806433  T
Q  403 cgccgcctccagaataa 419  Q
    |||||||| ||||||||    
T  11806434 cgccgccttcagaataa 11806450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 419
Target Start/End: Original strand, 8900229 - 8900345
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| ||| ||||| | ||  ||||| || ||| |||||||  ||    
T  8900229 tatctaccgaagttgttactaggttgagtcacgaccatatcgctctctttaaaacgttttgtgacactgtctaaagttgtgcaaaacatactatcaatca 8900328  T
Q  403 cgccgcctccagaataa 419  Q
    | |||||||||| ||||    
T  8900329 caccgcctccaggataa 8900345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 10106100 - 10106194
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  10106100 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 10106194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 38734272 - 38734366
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||| || ||||| |||  |||||| || |||||||| |||||| ||||    
T  38734272 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccctag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 38734366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 2493923 - 2493822
Alignment:
Q  318 ttactaggttgagtcacgacc-aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaa 416  Q
    ||||||||||||||| | | | |||||||||||||||||||||||||||||||||||||| |||||| ||| || ||||||| ||||| |||| |||| |    
T  2493923 ttactaggttgagtcgcaaactaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaag-caaactatcaaccacggcgcccccagga 2493825  T
Q  417 taa 419  Q
    |||    
T  2493824 taa 2493822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 409
Target Start/End: Original strand, 12906166 - 12906235
Alignment:
Q  339 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcc 409  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||| ||||| ||||    
T  12906166 aggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaag-cagactatcaaccacgacgcc 12906235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 13890810 - 13890904
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||||||||||||||||| | |||||| |||||| ||||| |||  |||||| || |||| ||| |||||| ||||    
T  13890810 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactacccaag-ttgtgcaaggtagactaacaaccacaccgtctccaggataa 13890904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 419
Target Start/End: Complemental strand, 39747263 - 39747169
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||| |||||| ||||| |||  |||||| || ||||| || |||||| ||||    
T  39747263 ggttgagtcacgaccaggttgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactagcaaccacgtcgtctccaggataa 39747169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 413
Target Start/End: Original strand, 5346652 - 5346748
Alignment:
Q  317 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctcca 413  Q
    ||||||||||||||| || | ||||||| ||||||||| |||||| ||||||||| ||||  ||||  || |||||||||||  |||||||||||||    
T  5346652 gttactaggttgagttacaatcaggtcgttctctttaaaacgttttgtggcactgtccaaatttgtacaatacagactatcaatcacgccgcctcca 5346748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 419
Target Start/End: Complemental strand, 26651264 - 26651170
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||| |||| | |||||| |||||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  26651264 ggttgagtcacgaccaggtcactctctttaagatgttttgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 26651170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 404
Target Start/End: Complemental strand, 27761944 - 27761858
Alignment:
Q  318 ttactaggttgagtcac-gaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    ||||||||||||||| | ||| ||||| |||||||||| |||||||||||||||| |||| |||||| ||| |||||||||| |||||    
T  27761944 ttactaggttgagtcgcagactaggtcactctctttaaaacgtttcgtggcactgtccaaaattgtgcaag-cagactatcaaccacg 27761858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 36684810 - 36684767
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  36684810 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 36684767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 413
Target Start/End: Complemental strand, 5602523 - 5602435
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctcca 413  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||| ||| || ||||| |||  |||||| || |||||||| |||||    
T  5602523 ggttgagtcacgaccagatcgctctctttaagacgtttcgctgcactaccctag-ttgtgcaaggtagactaacaaccacgccgtctcca 5602435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 339 - 404
Target Start/End: Complemental strand, 33381004 - 33380940
Alignment:
Q  339 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    ||||||||||||||||||||||||||| |||||| ||| |||||| ||| |||||||||| |||||    
T  33381004 aggtcgctctctttaagacgtttcgtgacactgctcaaaattgtgcaag-cagactatcaaccacg 33380940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 5724979 - 5725070
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || || |||||| |||  |||||| || || ||||| |||||| ||||    
T  5724979 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 5725070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 11251208 - 11251117
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  11251208 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 11251117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 37404511 - 37404420
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  37404511 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 37404420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 4633031 - 4632979
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  4633031 ttactaggttgagtcacgactatgtcgctctctttaagacgttttgcggcact 4632979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 377
Target Start/End: Complemental strand, 19422982 - 19422923
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaag 377  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||||  ||||| ||||||    
T  19422982 ttactgggttgagtcacgatcagatcgctctctttaagacgtttcgctgcactacccaag 19422923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 27716443 - 27716486
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  27716443 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 27716486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 34318319 - 34318276
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||    
T  34318319 tgagtcacgaccaagtcgctctctttaagacgtttcgcggcact 34318276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 37409632 - 37409589
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  37409632 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 37409589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 362
Target Start/End: Complemental strand, 8267929 - 8267891
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttc 362  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  8267929 ggttgagtcacgaccaggtcgctttctttaagacgtttc 8267891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 3584601 - 3584692
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| || ||| || || |||||| |||  |||||| || || ||||| |||||| ||||    
T  3584601 tgagtcacgaccaggtcgctttctttaagacgtttcgcggaactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 3584692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 398
Target Start/End: Complemental strand, 24159904 - 24159824
Alignment:
Q  318 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatca 398  Q
    |||||||| |||||| || || ||||||||||||||||||||||||||   ||||||||| |||||| ||| ||||||||||    
T  24159904 ttactaggctgagtcgcggactaggtcgctctctttaagacgtttcgtaatactgcccaaaattgtgcaag-cagactatca 24159824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 409
Target Start/End: Original strand, 36724698 - 36724789
Alignment:
Q  318 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcc 409  Q
    |||||||| ||||||| | || |||||||||||||||||||||||  ||||||| ||||| |||||| ||| ||||| |||| ||||| ||||    
T  36724698 ttactaggctgagtcatggactaggtcgctctctttaagacgttttatggcactacccaaaattgtgcaag-cagacaatcaaccacgacgcc 36724789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 5730105 - 5730141
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcg 363  Q
    |||||||||||||||||||| ||||||||||||||||    
T  5730105 tgagtcacgaccaggtcgctttctttaagacgtttcg 5730141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 14582096 - 14582190
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||| |||| ||||||||||||||||||| |||||| |||||| ||| || ||||| |||  |||||| || |||| ||| |||||| ||||    
T  14582096 ggttgagttacgatcaggtcgctctctttaagaagtttcgcggcactaccctag-ttgtgcaaggtagactaacaaccacaccgtctccaggataa 14582190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 46696593 - 46696645
Alignment:
Q  251 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt 303  Q
    ||||||||||||| ||||| |||| |||| ||||| |||||||||||||||||    
T  46696593 aattgttgtttttggattttcaaactgttttatttagatttccaaattctatt 46696645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 11387925 - 11387882
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| | |||||||||||||| ||||||    
T  11387925 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcact 11387882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 357
Target Start/End: Complemental strand, 41098050 - 41098017
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagac 357  Q
    ||||||||||||||||||||||| ||||||||||    
T  41098050 ggttgagtcacgaccaggtcgctttctttaagac 41098017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 233; Significance: 1e-128; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 113 - 419
Target Start/End: Original strand, 39522833 - 39523140
Alignment:
Q  113 tgttgtttacaacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaataagt 212  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  39522833 tgttgtttacaacaagcactttgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggacaattgaagctcaacaagt 39522932  T
Q  213 aacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgtt-gtatttggatttccaaattctattatctaccg 311  Q
    ||||||||||||||||||| ||     |||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||    
T  39522933 aacttcttcggtagacatagcagtaccaaacgtcttaaaattgttgtttttggatttccaaactgttagtatttggatttccaaattctattatctatcg 39523032  T
Q  312 aagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctc 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||| ||||||||||||    
T  39523033 aagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaccgcccaaaattgtgcaagacagactatcaaccacgccgcctc 39523132  T
Q  412 cagaataa 419  Q
    ||| ||||    
T  39523133 caggataa 39523140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 151 - 419
Target Start/End: Original strand, 561290 - 561558
Alignment:
Q  151 gatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaa 250  Q
    |||||||||||||  |||||||||| |||  | |||| ||||| |||| || ||||||||||||||||||||||||||||| || || ||||||||||||    
T  561290 gatgtaattctatagcttgatttattcttaatttattaagggacaattcaacctcaataagtaacttcttcggtagacatagcagatcgaaacgtcttaa 561389  T
Q  251 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 350  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  561390 aattgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 561489  T
Q  351 ttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||| |||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  561490 ttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 561558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 151 - 419
Target Start/End: Original strand, 42001257 - 42001525
Alignment:
Q  151 gatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaa 250  Q
    |||||||||||||  |||||||||| |||  | |||||||||| |||| || |||||||||||| |||||||||||||||| || || |||| || ||||    
T  42001257 gatgtaattctatagcttgatttattcttaatttatttagggacaattcaacctcaataagtaatttcttcggtagacatagcagatcgaaatgttttaa 42001356  T
Q  251 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 350  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42001357 aattgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 42001456  T
Q  351 ttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  42001457 ttaagacgtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccaggataa 42001525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 253 - 419
Target Start/End: Original strand, 41996590 - 41996756
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41996590 ttgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggttgctctcttt 41996689  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  41996690 aagacgtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccaggataa 41996756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 26667198 - 26667363
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26667198 tgttgtttttagatttccaaactattgtatttggagttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 26667297  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  26667298 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 26667363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 26938795 - 26938960
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26938795 tgttgtttttagatttccaaactattgtatttggagttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 26938894  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  26938895 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 26938960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 29168142 - 29167977
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29168142 tgttgtttttggatttccaaactgttgtatttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 29168043  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  29168042 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 29167977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 253 - 419
Target Start/End: Original strand, 556620 - 556786
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  556620 ttgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 556719  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||| |||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  556720 aagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 556786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 250 - 419
Target Start/End: Original strand, 39518332 - 39518501
Alignment:
Q  250 aaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 349  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39518332 aaattgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctc 39518431  T
Q  350 tttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||| |||||| | | |||||||||| ||||||||||||||| ||||    
T  39518432 tttaagacgtttcgtggcaccgcccaaaattgtgcatggcagactatcaaccacgccgcctccaggataa 39518501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 12102950 - 12103116
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttcc-aaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    |||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12102950 tgttgtttttggatttccaaactgttgtatttggatttcccaaattctattatctaccgaagttgttactaggttgagttacgaccaggtcgctctcttt 12103049  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  12103050 aagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 12103116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 256 - 419
Target Start/End: Original strand, 36423565 - 36423728
Alignment:
Q  256 ttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 355  Q
    |||||||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36423565 ttgtttttggattttcaaactgttgtatttggatttccaaaatctattatctaccgaagttgttactaggttgagtcgcgaccaggtcgctctctttaag 36423664  T
Q  356 acgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||| |||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||    
T  36423665 acgtttcgcggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaataa 36423728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 12045309 - 12045143
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    |||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12045309 tgttgtttttggatttccaaactgttgtattttggttttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgccctcttt 12045210  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||| ||||    
T  12045209 aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcgaccacgccgcctccaggataa 12045143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 37248964 - 37248799
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37248964 tgttgtttttggatttccaaactgttatatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 37248865  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||| |||||||||||| || || |||||| ||| |||||||||| ||||||||||||||| ||||    
T  37248864 agacatttcgtggcactacctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 37248799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 253 - 419
Target Start/End: Complemental strand, 12502070 - 12501903
Alignment:
Q  253 ttgttgtttttagatttccaaaatgtt-gtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 351  Q
    ||||||||||| ||||| |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  12502070 ttgttgtttttggattttcaaactgttcgtatttggatttccaaattctattatctactgaagttgttactaggttgagtcatgaccaggtcgctctctt 12501971  T
Q  352 taagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||| ||||||||||||||| ||||    
T  12501970 taagacgtttcgtggcactgcccaaaattgtgcaaaacagactatcaaccacgccgcctccaggataa 12501903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 7451684 - 7451849
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| ||||| |||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7451684 tgttgtttttggattttcaaactgttgtatttgaattttcaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 7451783  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||| |||| |||||| ||| |||||||||| |||||| |||||||| ||||    
T  7451784 agacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgctgcctccaggataa 7451849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 259 - 419
Target Start/End: Original strand, 36428640 - 36428800
Alignment:
Q  259 tttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 358  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36428640 tttttggatttccaaactgttgtatttggatttccaaattctattatctaacgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 36428739  T
Q  359 tttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||| | || ||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  36428740 ttttgcggaactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 36428800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 275 - 419
Target Start/End: Complemental strand, 36942413 - 36942269
Alignment:
Q  275 atgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgccc 374  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36942413 atgttgtttttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgccc 36942314  T
Q  375 aagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    || |||||| ||| |||||||||| ||||||||||||||| ||||    
T  36942313 aaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 36942269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 37652999 - 37652834
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  37652999 tgttgtttttggatttccaaattgttgtatttggatttccaaattctattatctaccgaagttgttattaggttgagtcacgatcaggtcgctctcttta 37652900  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||| || || |||| |||||| ||| |||||||||| ||||||| ||||||| ||||    
T  37652899 agacgtttcgtgacattgtccaaaattgtgcaaggcagactatcaaccacgccacctccaggataa 37652834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 10759992 - 10759824
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattc----tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 349  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||     
T  10759992 tgttgtttttggatttccaaactgttgtatttggatttccaaattcattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct- 10759894  T
Q  350 tttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||| |||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  10759893 tttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 10759824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 276 - 419
Target Start/End: Complemental strand, 36937658 - 36937515
Alignment:
Q  276 tgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgccca 375  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36937658 tgttgtttttggatttccaaattctattatctaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgccca 36937559  T
Q  376 agattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    | |||||| ||| |||||||||| ||||||||||||||| ||||    
T  36937558 aaattgtgcaaggcagactatcaaccacgccgcctccaggataa 36937515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 253 - 419
Target Start/End: Complemental strand, 6155589 - 6155423
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    |||||| |||| | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  6155589 ttgttgattttggttttccaaactgttgtatttggatttccaaattctattatctaccgaaattgttactaggttgagtcacgatcaggtcgctctcttt 6155490  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||| |||| ||| |  |||||||||||||| |||| |||||||||| ||||    
T  6155489 aagacgtttcgtggcactgtccaaaattttacaagacagactatcaaccacaccgcctccaggataa 6155423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 253 - 419
Target Start/End: Complemental strand, 6514770 - 6514605
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    ||||||||||| |||||  ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||    
T  6514770 ttgttgttttt-gattttaaaactgttgtatttggatttccaaattctattatctaccaaagttgttactaggttgagtcacgaccaagtcactctcttt 6514672  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||| ||| || ||| |||||||||| ||||||||||||||| ||||    
T  6514671 aagacgtttcgtggcactgcccaaaattttgcaaggcagactatcaaccacgccgcctccaggataa 6514605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 266 - 419
Target Start/End: Original strand, 40147833 - 40147986
Alignment:
Q  266 atttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 365  Q
    ||||||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| || ||||||||||||||||||| ||||||||    
T  40147833 atttccaaactattgtatttggatttccaaattctattatctatcgaagttgttattaggttgagtcatgatcaggtcgctctctttaagatgtttcgtg 40147932  T
Q  366 gcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  40147933 gcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 40147986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 41587329 - 41587164
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  41587329 tgttgtttttggatttctaaactgttgtatttgaattttcaaattctattatctaccgaagttgttactagtttgagtcacgaccaggttgctctcttta 41587230  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||| |||||  ||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  41587229 agacgtttcgtgacactgttcaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 41587164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 121 - 419
Target Start/End: Complemental strand, 11981584 - 11981284
Alignment:
Q  121 acaacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtattta-gggataattgaagctcaataagtaacttct 219  Q
    ||||||| |||||| |||||||||||||| |||||| |||||     |||||||||||  || |||||  |||| ||   || |||||||||||| ||||    
T  11981584 acaacaatcacttcattgtttcagtcgaaagatgtatttctaaagtctgatttatcctagttttatttttgggacaacgaaatctcaataagtaatttct 11981485  T
Q  220 tcggtagacataacatatagaaacgtcttaaaattgttgttttta--gatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttg 317  Q
     |||||||| || ||    ||||| |||||||||||||||||||   ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  11981484 acggtagacgtagcagtaggaaacatcttaaaattgttgtttttttggattttcaaactgttgtagttggatttccaaattctattatctaccgaagttg 11981385  T
Q  318 ttactaggttga-gtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaa 416  Q
    ||||||||||||  | | |||||||||||| |||||||||||||| |||||||||||||| |||||| ||||||||  |||| |||||||||||||||||    
T  11981384 ttactaggttgattttatgaccaggtcgctttctttaagacgttttgtggcactgcccaaaattgtgcaagacaga--atcaaccacgccgcctccagaa 11981287  T
Q  417 taa 419  Q
    |||    
T  11981286 taa 11981284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 254 - 411
Target Start/End: Original strand, 3665857 - 3666015
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    |||||||||| |||||||||| |||||||||| || ||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||     
T  3665857 tgttgtttttggatttccaaactgttgtattttggtttttcaaattctattttctaccgaagttgttactaggttgagtcacgactaggtcgctctcttc 3665956  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctc 411  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| ||||||| ||||    
T  3665957 aagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccacctc 3666015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 253 - 419
Target Start/End: Complemental strand, 35680048 - 35679879
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattc----tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct 348  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||||    ||||||||||||||| |||||||||||||||||| | | ||||||||||    
T  35680048 ttgttgtttttggattttcaaattgttgtatttggatttccaaattcattatattatctaccgaagctgttactaggttgagtcatggc-aggtcgctct 35679950  T
Q  349 ctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||| | || |||||| ||| |||||||||| ||||||||||||||| ||||    
T  35679949 ctttaagacgtttcgtggcactgtcaaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 35679879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 277 - 413
Target Start/End: Complemental strand, 20181209 - 20181073
Alignment:
Q  277 gttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaa 376  Q
    ||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||| || ||||    
T  20181209 gttgtatttggatttccaaattctattatctactgaaattgttattaggttgagtcacgaccaggtcactctctttaagacgtttcgtggcattgtccaa 20181110  T
Q  377 gattgtggaagacagactatcanccacgccgcctcca 413  Q
     ||| || |||||||||||| | ||||||| ||||||    
T  20181109 aattatgcaagacagactattaaccacgccacctcca 20181073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 258 - 419
Target Start/End: Complemental strand, 32461702 - 32461553
Alignment:
Q  258 gtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 357  Q
    |||||| ||||||||||   ||||||||||||||| ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||    
T  32461702 gtttttggatttccaaa---ttgtatttggatttctaaattctattatctaccgaagt---------gttgagtcacgaccaggtcgctctctttaagac 32461615  T
Q  358 gtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||| |||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  32461614 gttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 32461553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 253 - 419
Target Start/End: Complemental strand, 12042102 - 12041936
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggt--tgagtcacgaccaggtcgctctct 350  Q
    ||||||||||| ||||| |||| ||||  |||||||||| |||||| | |||||||| ||||||||||||||||  |||||||||||||||||| |||||    
T  12042102 ttgttgtttttggattttcaaactgtt--atttggattttcaaattatgttatctactgaagttgttactaggtcatgagtcacgaccaggtcgttctct 12042005  T
Q  351 ttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||||| | | || ||| || ||||||| ||||||||||||||| ||||    
T  12042004 ttaagacgtttcgtggcactgcccaaaaatatgcaaggcaaactatcaaccacgccgcctccaggataa 12041936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 304 - 403
Target Start/End: Complemental strand, 12102950 - 12102851
Alignment:
Q  304 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccac 403  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| |||| |||||| |||  ||||||||| ||||    
T  12102950 atctaccgaagttgttactaggttgagtcacgactaggtcgctctctttaagactttttgtggcactggccaaaattgtgcaaggaagactatcaaccac 12102851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 311 - 420
Target Start/End: Complemental strand, 15414993 - 15414884
Alignment:
Q  311 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcct 410  Q
    |||||||||||| |||||||||||||| ||  ||||||||||||| ||||| |||||||||||||| ||||||  || |||| ||||| |||||||||||    
T  15414993 gaagttgttacttggttgagtcacgactagaacgctctctttaagtcgttttgtggcactgcccaaaattgtgtgaggcagaatatcaaccacgccgcct 15414894  T
Q  411 ccagaataat 420  Q
    |||| |||||    
T  15414893 ccaggataat 15414884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 37550170 - 37550089
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacga 336  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  37550170 tgttgtttttggattttcaaattgttgtatttggatttccaaattctattatctaccgaagttg-tattaggttgagtcacga 37550089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 106 - 263
Target Start/End: Complemental strand, 23977642 - 23977484
Alignment:
Q  106 ttagtgttgttgttt--acaacaagcacttcgttgtttcagtcgaag-gatgtaattctatgacttgatttatccttcttgtatttagggataattgaag 202  Q
    ||||||||||||||   ||||||| |||||| ||||||||||||||  |||||| ||||||  |||||||||||||| || |||||||||||||   ||     
T  23977642 ttagtgttgttgttataacaacaaacacttcattgtttcagtcgaaaagatgtatttctatagcttgatttatccttttt-tatttagggataacgaaac 23977544  T
Q  203 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgttttt 263  Q
    |||||||| ||| |||||||||||||||| ||  | |||||||||||||||||||||||||    
T  23977543 ctcaataaataatttcttcggtagacatatcagtt-gaaacgtcttaaaattgttgttttt 23977484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 263
Target Start/End: Complemental strand, 36937761 - 36937649
Alignment:
Q  151 gatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaa 250  Q
    |||||||||||||  |||||||||| |||  | | |||||||| |||| || |||||||||||||||||||| |||||||| || || ||||||||||||    
T  36937761 gatgtaattctatagcttgatttattcttaatttgtttagggacaattcaacctcaataagtaacttcttcgatagacatagcagatcgaaacgtcttaa 36937662  T
Q  251 aattgttgttttt 263  Q
    |||||||||||||    
T  36937661 aattgttgttttt 36937649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 24435964 - 24435873
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  ||||| ||||| |||  ||||||||| |||||||| |||||| ||||    
T  24435964 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactatccaag-ttgtgcaaggtagactatcaaccacgccgtctccaggataa 24435873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 7805068 - 7805162
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||| |||||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  7805068 ggttgagtcacgaccaggtccctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 7805162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 14374132 - 14374226
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| | |  |||||| || |||||||| |||||| ||||    
T  14374132 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcagggtagactaacaaccacgccgtctccaggataa 14374226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 13582785 - 13582694
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||  ||||| |||  |||||| || |||||||| |||||| ||||    
T  13582785 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaa-tttgtgcaaggtagactaacaaccacgccgtctccaggataa 13582694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 36253826 - 36253917
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || |||||||||||| ||||    
T  36253826 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgcctccaggataa 36253917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 17510058 - 17510149
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  17510058 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 17510149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 371
Target Start/End: Original strand, 9911128 - 9911196
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactg 371  Q
    ||||||||||||||||||||||||||||| | ||| | |||| ||| |||||||| ||| |||||||||    
T  9911128 tatctaccgaagttgttactaggttgagttaggacaatgtcgttctttttaagacattttgtggcactg 9911196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 274
Target Start/End: Complemental strand, 15415123 - 15415020
Alignment:
Q  171 tttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttc 270  Q
    ||||||||||||||||||||||| |||  ||    | | ||||| |||||||||||||||  || |  |||||||||||||||||||| |||| ||||||    
T  15415123 tttatccttcttgtatttagggacaataaaattcgagttagtaatttcttcggtagacatggcaaaacgaaacgtcttaaaattgttggttttggatttc 15415024  T
Q  271 caaa 274  Q
    ||||    
T  15415023 caaa 15415020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 26709102 - 26709145
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  26709102 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 26709145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 26978836 - 26978879
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  26978836 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 26978879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 42019573 - 42019616
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  42019573 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 42019616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 24771452 - 24771361
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| ||||||||| |||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  24771452 tgagtcacgaccaggtcgctttctttaagatgtttcgcggcactacctaag-ttgtgcaaggtagactaacaaccgcgccgtctccaggataa 24771361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 1414155 - 1414103
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||| || |||||||||| ||||||||| |||||||||||||||| ||||||    
T  1414155 ttactggggtgagtcacgatcaggtcgctttctttaagacgtttcgcggcact 1414103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 24776919 - 24776867
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||| || ||||||||||||| |||||| |||||||||||||||| ||||||    
T  24776919 ttactggggtgagtcacgaccatgtcgctttctttaagacgtttcgcggcact 24776867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 41853548 - 41853584
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcg 363  Q
    |||||||||||||||||||| ||||||||||||||||    
T  41853548 tgagtcacgaccaggtcgctttctttaagacgtttcg 41853584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 17504953 - 17504996
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||| | |||||||||||||||| ||||||    
T  17504953 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcact 17504996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 357
Target Start/End: Complemental strand, 13301585 - 13301551
Alignment:
Q  323 aggttgagtcacgaccaggtcgctctctttaagac 357  Q
    |||||||||||||||||||||||| ||||||||||    
T  13301585 aggttgagtcacgaccaggtcgctttctttaagac 13301551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 404
Target Start/End: Complemental strand, 18265588 - 18265524
Alignment:
Q  339 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    ||||||||||||||||||||||| ||| ||||||| || |||||| ||  |||||||||| |||||    
T  18265588 aggtcgctctctttaagacgttttgtgacactgcctaaaattgtgcaa-tcagactatcaaccacg 18265524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 28857858 - 28857954
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctc-tttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||| |||||| || |||||||||||||| |||||| ||  || ||||| |||  |||| | || ||||||||||| ||| ||||    
T  28857858 ggttgagtcacgaccaagtcgctttcttttaagacgtttcgcggcactacctgagtttgtgcaaggtagaccaacaaccacgccgcctacaggataa 28857954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 357
Target Start/End: Original strand, 31731540 - 31731573
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagac 357  Q
    ||||||||||||||||||||||| ||||||||||    
T  31731540 ggttgagtcacgaccaggtcgctttctttaagac 31731573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 41858593 - 41858684
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||| ||||||||| |||||||||||||||  |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  41858593 tgagtcacgatcaggtcgctttctttaagacgtttcacggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 41858684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 100 - 419
Target Start/End: Original strand, 17025706 - 17026026
Alignment:
Q  100 aattttttagtgttgttgttta--caacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataat 197  Q
    ||||| |||||||||||||| |  ||||||||||||||| |||||||||||| |||||||||||||  ||||||||||||||  ||||||||| || ||     
T  17025706 aatttcttagtgttgttgttgaaacaacaagcacttcgtggtttcagtcgaaagatgtaattctatagcttgatttatccttaatgtatttagagacaac 17025805  T
Q  198 tgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaat 297  Q
    | || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  17025806 ttaacctcaataagtaacttct-cggtagacataacatatagaaacgtcttaaaattgttgtttttagattttcaaattgttgtatttggatttccaaat 17025904  T
Q  298 tctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatc 397  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  17025905 tctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattgtgcaagacagactatc 17026004  T
Q  398 anccacgccgcctccagaataa 419  Q
    |  |||| ||||||||| ||||    
T  17026005 aatcacgtcgcctccaggataa 17026026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 100 - 419
Target Start/End: Original strand, 17556198 - 17556518
Alignment:
Q  100 aattttttagtgttgttgttta--caacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataat 197  Q
    ||||| |||||||||||||| |  ||||||||||||||| |||||||||||| |||||||||||||  ||||||||||||||  ||||||||| || ||     
T  17556198 aatttcttagtgttgttgttgaaacaacaagcacttcgtggtttcagtcgaaagatgtaattctatagcttgatttatccttaatgtatttagagacaac 17556297  T
Q  198 tgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaat 297  Q
    | || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  17556298 ttaacctcaataagtaacttct-cggtagacataacatatagaaacgtcttaaaattgttgtttttagattttcaaattgttgtatttggatttccaaat 17556396  T
Q  298 tctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatc 397  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  17556397 tctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattgtgcaagacagactatc 17556496  T
Q  398 anccacgccgcctccagaataa 419  Q
    |  |||| ||||||||| ||||    
T  17556497 aatcacgtcgcctccaggataa 17556518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 129 - 410
Target Start/End: Original strand, 34118267 - 34118548
Alignment:
Q  129 cacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagac 228  Q
    |||||| | |||||||| ||| |||||| ||||||  |||||||||||||||||||||||||||| || |||| |||||||| |||||||||||||||||    
T  34118267 cacttcatcgtttcagttgaaagatgtatttctatagcttgatttatccttcttgtatttagggacaactgaacctcaataaataacttcttcggtagac 34118366  T
Q  229 ataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttg 328  Q
    ||| || || ||||||||||||||||||||||||| |||||||||| |  ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  34118367 atagcagatcgaaacgtcttaaaattgttgtttttggatttccaaactaatgtatttagatttccaaattctattatctactgaagttgttactaggttg 34118466  T
Q  329 agtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcct 410  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| |||||||||| ||||| |||||    
T  34118467 agtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgtcgcct 34118548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 151 - 398
Target Start/End: Complemental strand, 4238588 - 4238340
Alignment:
Q  151 gatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaa 250  Q
    |||||||||||||  |||||||||| |||  | |||||||||| |||| || |||||||||||||||||||| |||| ||| || || ||||||||||||    
T  4238588 gatgtaattctatagcttgatttattcttaatttatttagggacaattcaacctcaataagtaacttcttcgatagatatagcagatcgaaacgtcttaa 4238489  T
Q  251 aattgttgtttttag-atttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 349  Q
    ||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4238488 aattgttgttttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 4238389  T
Q  350 tttaagacgtttcgtggcactgcccaagattgtggaagacagactatca 398  Q
    ||||| ||||||| ||||||||||||| |||||| ||| ||||||||||    
T  4238388 tttaacacgtttcatggcactgcccaaaattgtgcaaggcagactatca 4238340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 100 - 419
Target Start/End: Complemental strand, 38182563 - 38182241
Alignment:
Q  100 aattttttagtgttgttgttta---caacaagcacttcgttgtttcagtcgaaggatgtaattctat-gacttgatttatccttcttgtatttagggata 195  Q
    ||||| |||||||||||||||    |||||| |||||| | |||||||||||| |||||| |||||| | |||  |||||||||||||||| |||||| |    
T  38182563 aatttcttagtgttgttgtttgaagcaacaatcacttcatcgtttcagtcgaaagatgtatttctatagcctt--tttatccttcttgtatatagggaca 38182466  T
Q  196 attgaagctcaataagtaac---ttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttc 292  Q
    |   || ||||||||||||    |||||||||||||||| ||  | |||||||||||||||||||||||||  |||  |||| |||||||||||||||||    
T  38182465 acgaaatctcaataagtaataatttcttcggtagacatagcag-tcgaaacgtcttaaaattgttgtttttgaattgtcaaactgttgtatttggatttc 38182367  T
Q  293 caaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacaga 392  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||    
T  38182366 caaattctattatctaccgaagttgttac-aggttgagtcacgaccaggtcgctctctttaaaacgtttcgtggcacttcccaagattgtgcaaggcaga 38182268  T
Q  393 ctatcanccacgccgcctccagaataa 419  Q
     ||||| ||||||||||||||| ||||    
T  38182267 ttatcaaccacgccgcctccaggataa 38182241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 253 - 419
Target Start/End: Complemental strand, 31450036 - 31449870
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31450036 ttgttgtttttggatttccaaagtgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctcttt 31449937  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  31449936 aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 31449870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 254 - 413
Target Start/End: Original strand, 33416473 - 33416632
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33416473 tgttgtttttggatttccaaactgttgtatttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcggtctcttta 33416572  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctcca 413  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||    
T  33416573 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctcca 33416632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 252 - 419
Target Start/End: Complemental strand, 18876537 - 18876371
Alignment:
Q  252 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 351  Q
    |||||||||||| |||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  18876537 attgttgtttttggatttccaaactgctgtatttggatttccaaattctattatataccgaagttgttactaggttgagtcacgaccaggtcgctct-tt 18876439  T
Q  352 taagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  18876438 taagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 18876371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 44926092 - 44925927
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| || ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44926092 tgttgttttttgatttccaaactgctgtatttggattttcaaattcttttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 44925993  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    | ||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  44925992 aaacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 44925927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 250 - 383
Target Start/End: Complemental strand, 40130859 - 40130726
Alignment:
Q  250 aaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 349  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40130859 aaattgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 40130760  T
Q  350 tttaagacgtttcgtggcactgcccaagattgtg 383  Q
    ||||||||||||||||||||||||||| ||||||    
T  40130759 tttaagacgtttcgtggcactgcccaaaattgtg 40130726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 97 - 413
Target Start/End: Complemental strand, 40126192 - 40125895
Alignment:
Q  97 gtgaattttttagtgttgttgtttacaac---aagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttaggga 193  Q
    |||||||| |||||||||||||||| |||   || |||||| | ||||||||| || |||||| ||||||  ||||||||||||||  ||| || |||||    
T  40126192 gtgaatttcttagtgttgttgtttataactacaaccacttcatcgtttcagtcaaaagatgtatttctatagcttgatttatccttaatgtgttcaggga 40126093  T
Q  194 taattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttcc 293  Q
     || | || |||||||| ||||||||||||||||| || || || ||||||||||||||||||||||||| |||||||||| |||||||||||           
T  40126092 caacttaacctcaataaataacttcttcggtagacgtagcagatcgaaacgtcttaaaattgttgtttttggatttccaaactgttgtatttg------- 40126000  T
Q  294 aaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagac 393  Q
                   |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| |||||    
T  40125999 ---------------ccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagac 40125915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 253 - 411
Target Start/End: Original strand, 1807397 - 1807555
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    ||||||||||| ||||| |||| ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1807397 ttgttgtttttggattttcaaattgttgtatttgaattttccaattctattatctaccgaagttgttactaggttgagtcacgactaggtcgctctcttt 1807496  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctc 411  Q
    ||||||||||||| |||||||||| |||||| ||| |||||||||| ||||||||||||    
T  1807497 aagacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctc 1807555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 259 - 398
Target Start/End: Complemental strand, 4243218 - 4243079
Alignment:
Q  259 tttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 358  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4243218 tttttggatttccaaactgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaacacg 4243119  T
Q  359 tttcgtggcactgcccaagattgtggaagacagactatca 398  Q
    |||| ||||||||||||| |||||| ||| ||||||||||    
T  4243118 tttcatggcactgcccaaaattgtgcaaggcagactatca 4243079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 253 - 419
Target Start/End: Complemental strand, 1911139 - 1910973
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    ||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| ||||||||||| |||||| |||||||| |||||||||||||||    
T  1911139 ttgttgtttttggatttccaaactgttgtatttggattttcaaattctattatctatcgaagttgttattaggttaagtcacgatcaggtcgctctcttt 1911040  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||   ||| |||||| ||  |||||||||| |||||| |||||||| ||||    
T  1911039 aagacgtttcgtggcactagtcaaaattgtgcaaagcagactatcaaccacgctgcctccagtataa 1910973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 256 - 407
Target Start/End: Complemental strand, 28559821 - 28559670
Alignment:
Q  256 ttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 355  Q
    |||||||| |||||||||| ||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  28559821 ttgtttttggatttccaaactgttgtatttggatttataaattatattatctaccgaagttgttactaggttgagtcacgacaatgtcgctctctataag 28559722  T
Q  356 acgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccg 407  Q
    |||||||||||||||| |||| |||||| ||| || ||||||| ||||||||    
T  28559721 acgtttcgtggcactgtccaaaattgtgcaaggcaaactatcaaccacgccg 28559670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 302 - 419
Target Start/End: Original strand, 19166608 - 19166725
Alignment:
Q  302 ttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancc 401  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| | | |||||||||| ||    
T  19166608 ttatctaccgaagttgttactaggttgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcacggcagactatcaacc 19166707  T
Q  402 acgccgcctccagaataa 419  Q
    ||||||||||||| ||||    
T  19166708 acgccgcctccaggataa 19166725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 96 - 411
Target Start/End: Original strand, 2965389 - 2965713
Alignment:
Q  96 tgtgaattttttagtgttgttgttt--acaacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttaggga 193  Q
    ||||||||||||||||||||||||   ||||||| |||||| | ||||||||  || ||||||  ||||| |  |||||||| ||||||||||||||| |    
T  2965389 tgtgaattttttagtgttgttgttatgacaacaaacacttcatcgtttcagttaaaagatgtatatctataatctgatttattcttcttgtatttaggaa 2965488  T
Q  194 taattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttcc 293  Q
     |||  || |    ||||||| |||||||||||| ||| ||   | |||||||||||||||||||||||| |||||| ||| || |||||||| ||||||    
T  2965489 caatgaaaccg---taagtaatttcttcggtagatatagcagtca-aaacgtcttaaaattgttgtttttggatttcgaaactgctgtatttgaatttcc 2965584  T
Q  294 aaattctatt------------atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattg 381  Q
    ||||||||||            ||| ||| || |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| || ||||    
T  2965585 aaattctattttgaaaagaaatatccaccaaatttgttactaggt-gagtcacgaccaggtcgctctctttaaaacgtttcgtggcactgcctaaaattg 2965683  T
Q  382 tggaagacagactatcanccacgccgcctc 411  Q
    || |||||| ||||||| |||| |||||||    
T  2965684 tgcaagacacactatcaaccacaccgcctc 2965713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 300 - 419
Target Start/End: Original strand, 36683551 - 36683670
Alignment:
Q  300 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcan 399  Q
    |||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||     
T  36683551 tattatctaccggagttgttactaggttgagtcatgactaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaaggcagactatcaa 36683650  T
Q  400 ccacgccgcctccagaataa 419  Q
    |||||| |||||||| ||||    
T  36683651 ccacgctgcctccaggataa 36683670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 304 - 413
Target Start/End: Complemental strand, 17953992 - 17953883
Alignment:
Q  304 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccac 403  Q
    |||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  17953992 atctaccgaagttgttactaggttgagtaacgaccatgtcgctttctttaagacgtttcgtggcactgcccaaaattgtgcaagacagaatatcaaccac 17953893  T
Q  404 gccgcctcca 413  Q
    ||||||||||    
T  17953892 gccgcctcca 17953883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 303 - 413
Target Start/End: Original strand, 24090602 - 24090712
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| |||| |||||  ||    
T  24090602 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaagttgtgcaaggcagaatatcaatca 24090701  T
Q  403 cgccgcctcca 413  Q
    || ||||||||    
T  24090702 cgtcgcctcca 24090712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 304 - 419
Target Start/End: Complemental strand, 15875787 - 15875672
Alignment:
Q  304 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccac 403  Q
    ||||| ||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||| ||||    
T  15875787 atctatcgaagttgttactaaattgagttacgaccaggtcgctctctttaggacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccac 15875688  T
Q  404 gccgcctccagaataa 419  Q
    ||||||||||| ||||    
T  15875687 gccgcctccaggataa 15875672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 19915073 - 19915155
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacga 336  Q
    |||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19915073 tgttgtttttggatttacaaactgttgtatttgtatttccaaattctattatctaccgaagttgttactaggttgagtcacga 19915155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 411
Target Start/End: Complemental strand, 23548752 - 23548644
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||   || |||||| ||| | |||||||| |||    
T  23548752 tatctaccgaagttgttactaggttgagtcacgacctggtcgctctctataagacgtttcgtggcactgtgtaaaattgtgcaaggcggactatcaacca 23548653  T
Q  403 cgccgcctc 411  Q
    || ||||||    
T  23548652 cgtcgcctc 23548644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 43302880 - 43302722
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| ||||| |||| |||||||| ||||||||||| ||||||        |||||||||| |||| ||||| |||||| ||||| ||||||||    
T  43302880 tgttgtttttggattttcaaactgttgtatatggatttccaagttctat--------gaagttgttattaggctgagttacgacccggtcgttctcttta 43302789  T
Q  354 agacgtttcgtggcactg-cccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||| || || |||||| |||  ||||||||| ||||||||||||||| ||||    
T  43302788 agacgtttcgtggcactgtccaaaaattgtgcaaggtagactatcaaccacgccgcctccaggataa 43302722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 296 - 411
Target Start/End: Complemental strand, 2355586 - 2355471
Alignment:
Q  296 attctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagacta 395  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||  || |||| |||||||||||||||| ||||   ||| |||||| |||||||||||    
T  2355586 attctattatctaccaaagttgttactagattgagtcaccaccatatcactctttttaagacgtttcgtgacacttttcaaaattgtgcaagacagacta 2355487  T
Q  396 tcanccacgccgcctc 411  Q
    ||| ||||||||||||    
T  2355486 tcaaccacgccgcctc 2355471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 326 - 419
Target Start/End: Complemental strand, 33616823 - 33616731
Alignment:
Q  326 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  33616823 ttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 33616731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 19430011 - 19430093
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccg 407  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| || ||||||||    
T  19430011 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccg 19430093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 19435513 - 19435595
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccg 407  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| || ||||||||    
T  19435513 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccg 19435595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 19566160 - 19566242
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccg 407  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| || ||||||||    
T  19566160 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccg 19566242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 19571662 - 19571744
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccg 407  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| || ||||||||    
T  19571662 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccg 19571744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 31030525 - 31030619
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||| ||| || |||  |||||| || |||||||| |||||| ||||    
T  31030525 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcgacactacccaa-attatgcaaggtagactaacaaccacgccgtctccaggataa 31030619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 318 - 377
Target Start/End: Original strand, 13584341 - 13584400
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaag 377  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  13584341 ttaccaggttgaatcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag 13584400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 317 - 407
Target Start/End: Complemental strand, 28564927 - 28564837
Alignment:
Q  317 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccg 407  Q
    |||||||||||||||||||| ||||||||||||| ||| || |||| || |||||| ||| |||||  |||||||||||| | ||||||||    
T  28564927 gttactaggttgagtcacgatcaggtcgctctctataaaacatttcatgacactgctcaaaattgttcaagacagactattaaccacgccg 28564837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 317 - 407
Target Start/End: Complemental strand, 28572550 - 28572460
Alignment:
Q  317 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccg 407  Q
    |||||||||||||||||||| ||||||||||||| ||| || |||| || |||||| ||| |||||  |||||||||||| | ||||||||    
T  28572550 gttactaggttgagtcacgatcaggtcgctctctataaaacatttcatgacactgctcaaaattgttcaagacagactattaaccacgccg 28572460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 32015700 - 32015743
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  32015700 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 32015743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 403
Target Start/End: Complemental strand, 24673438 - 24673345
Alignment:
Q  310 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccac 403  Q
    |||||||||||||||||||||| |||| ||| ||||||| ||||| |||||||||| |||||  ||| ||| || |||| ||||||||| ||||    
T  24673438 cgaagttgttactaggttgagttacgatcagatcgctctttttaaaacgtttcgtgacactgttcaaaattatgcaagatagactatcacccac 24673345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 404
Target Start/End: Original strand, 19954262 - 19954348
Alignment:
Q  318 ttactaggttgagtcac-gaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    ||||||||||||||| | ||| || |||||||||||||||||||| |||||||||||||| |||||  ||| |||||||||| |||||    
T  19954262 ttactaggttgagtcgcagactagatcgctctctttaagacgttttgtggcactgcccaaaattgtacaag-cagactatcaaccacg 19954348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 403
Target Start/End: Complemental strand, 4544356 - 4544271
Alignment:
Q  318 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccac 403  Q
    |||||||| ||||||||| || |||||||||||||||||||||||| ||||||||| ||| |||||| |||  ||||||||| ||||    
T  4544356 ttactaggctgagtcacggactaggtcgctctctttaagacgtttcatggcactgctcaaaattgtgcaag-tagactatcaaccac 4544271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 411
Target Start/End: Original strand, 29220240 - 29220347
Alignment:
Q  302 ttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancc 401  Q
    |||| |||||||||||||| ||||||||||||||||  |||  | ||||||||||||||| ||| |||||  ||| |||||| |||  ||||||||| ||    
T  29220240 ttatttaccgaagttgttagtaggttgagtcacgactgggt--cactctttaagacgttttgtgtcactgatcaaaattgtgcaaggtagactatcaacc 29220337  T
Q  402 acgccgcctc 411  Q
    |||| |||||    
T  29220338 acgctgcctc 29220347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 318 - 402
Target Start/End: Original strand, 19949808 - 19949892
Alignment:
Q  318 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    |||||||| ||||||||| || | |||||||||||||||| ||||||||||||||||||| |||| | ||| |||||||||| |||    
T  19949808 ttactaggctgagtcacggactacgtcgctctctttaagaagtttcgtggcactgcccaaaattgagcaag-cagactatcaacca 19949892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 2469986 - 2470044
Alignment:
Q  339 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatca 398  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||| ||| ||||||||||    
T  2469986 aggtcgctctctttaagacgttttgtggcactgctcaaaattgtgcaag-cagactatca 2470044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 407
Target Start/End: Original strand, 7902561 - 7902642
Alignment:
Q  326 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccg 407  Q
    |||||||||||||| |||||||||||||| | |||||||| || | ||||| |||||  |||||| | ||||| ||||||||    
T  7902561 ttgagtcacgaccaagtcgctctctttaaaatgtttcgtgacattacccaaaattgtataagacatattatcaaccacgccg 7902642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 15951618 - 15951584
Alignment:
Q  326 ttgagtcacgaccaggtcgctctctttaagacgtt 360  Q
    |||||||||||||||||||||||||||||||||||    
T  15951618 ttgagtcacgaccaggtcgctctctttaagacgtt 15951584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 404
Target Start/End: Original strand, 5883983 - 5884074
Alignment:
Q  312 aagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||||||||||| |||| | || |||| |||||  |||| | ||||||| |||||    
T  5883983 aagttattactgggttgagtcacgaccaggtagctct-tttaagacgttttgtggtagtgtccaaaattgtacaagagatactatcatccacg 5884074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 17955884 - 17955793
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| | |||||||||||||| |||||| || || |||||| |||  |||||| || || ||||| |||||| ||||    
T  17955884 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 17955793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 419
Target Start/End: Complemental strand, 21644172 - 21644085
Alignment:
Q  331 tcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  21644172 tcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgactccaggataa 21644085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 24884712 - 24884803
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||| ||| |||||||||||||| | |||||| || ||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  24884712 tgagtcacgaccaggtagctttctttaagacgttttgcggcactacctaag-ttgtgcaaggtagactagcaaccacgccgtctccaggataa 24884803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 42514469 - 42514378
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||| |||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  42514469 tgagtcatgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 42514378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 343
Target Start/End: Original strand, 12820324 - 12820363
Alignment:
Q  304 atctaccgaagttgttactaggttgagtcacgaccaggtc 343  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  12820324 atctaccgaggttgttactaggttgagtcacgatcaggtc 12820363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 28565327 - 28565268
Alignment:
Q  265 gatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactag 324  Q
    ||||| |||| |||| |||||| ||||| ||||| ||||||||| |||||||||||||||    
T  28565327 gattttcaaactgttttatttgaatttctaaattatattatctatcgaagttgttactag 28565268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 28572950 - 28572891
Alignment:
Q  265 gatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactag 324  Q
    ||||| |||| |||| |||||| ||||| ||||| ||||||||| |||||||||||||||    
T  28572950 gattttcaaactgttttatttgaatttctaaattatattatctatcgaagttgttactag 28572891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 32010538 - 32010581
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||||| |||||||| ||||| ||||||    
T  32010538 tgagtcacgaccaggtcgctctttttaagacatttcgcggcact 32010581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 357
Target Start/End: Complemental strand, 34818802 - 34818764
Alignment:
Q  319 tactaggttgagtcacgaccaggtcgctctctttaagac 357  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  34818802 tactgggttgagtcacgaccaggtcgctttctttaagac 34818764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 357
Target Start/End: Original strand, 37771703 - 37771741
Alignment:
Q  319 tactaggttgagtcacgaccaggtcgctctctttaagac 357  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  37771703 tactgggttgagtcacgaccaggtcgctttctttaagac 37771741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 368
Target Start/End: Original strand, 13149709 - 13149773
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggca 368  Q
    |||||| ||||||||||| ||||||||||||||| || |||| ||| ||| |||||||| ||||||    
T  13149709 tatctatcgaagttgttattaggttgagtcacgatcatgtcgttct-tttgagacgttttgtggca 13149773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 404
Target Start/End: Original strand, 17793450 - 17793529
Alignment:
Q  325 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    |||||||||| |||| |||| |||||||||||||||||  | |||||| ||| |||||  ||| || ||||||| |||||    
T  17793450 gttgagtcacaaccatgtcgttctctttaagacgtttcacgacactgctcaaaattgtacaagtcaaactatcaaccacg 17793529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 27415539 - 27415602
Alignment:
Q  356 acgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||| || |||||||||| ||||  | ||||| ||||| ||||| ||||||||    
T  27415539 acgtttcgtggcactacctaagattgtggcagacgaattatcaaccacgtcgccttcagaataa 27415602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 43999334 - 43999282
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||| ||||||||||||| ||||||| | ||||||| |||||||| ||||||    
T  43999334 ttactgggttgagtcacgatcaggtcgttttctttaaaacgtttcgcggcact 43999282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 96 - 419
Target Start/End: Complemental strand, 7571547 - 7571222
Alignment:
Q  96 tgtgaattttttagtgttgttgttt--acaacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttaggga 193  Q
    ||||||||| ||| ||||||||||   ||||||| | |||| ||||||||||| ||  ||||| ||||||  ||||||||||||||  |||||||||| |    
T  7571547 tgtgaatttcttaatgttgttgttataacaacaaactcttcattgtttcagtctaaatatgtatttctatagcttgatttatccttaatgtatttaggaa 7571448  T
Q  194 taattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttcc 293  Q
     || |||| || |||||||||||||||||||||||||| || || ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  7571447 caactgaaccttaataagtaacttcttcggtagacatagcagatcgaaacgtcttaaaattgttgtttttggatttccaaactgttgtatttggatttcc 7571348  T
Q  294 aaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  7571347 aaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagac 7571248  T
Q  394 tatcanccacgccgcctccagaataa 419  Q
    |||||  |||||||||||||| ||||    
T  7571247 tatcaatcacgccgcctccaggataa 7571222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 151 - 419
Target Start/End: Original strand, 3692439 - 3692707
Alignment:
Q  151 gatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaa 250  Q
    |||||||||||||  ||||||||||||||| ||||| |||||| ||||||||||||| ||||||||||||||||||||  | || || ||||||||||||    
T  3692439 gatgtaattctatagcttgatttatccttcatgtatgtagggacaattgaagctcaacaagtaacttcttcggtagacgcagcagatcgaaacgtcttaa 3692538  T
Q  251 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 350  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3692539 aattgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 3692638  T
Q  351 ttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||| ||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  3692639 ttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 3692707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 57 - 419
Target Start/End: Complemental strand, 23661818 - 23661468
Alignment:
Q  57 tatccacaattaatttcacgttttaccattgaaagcgat-tgtgaattttttagtgttgttgtttacaacaagcacttcgttgtttcagtcgaaggatgt 155  Q
    |||||||||||||||| | | ||||||||| |||| ||| ||  ||||| ||||||||  |  | |||||||||||||||||||||||||| ||||||||    
T  23661818 tatccacaattaatttaatgctttaccattaaaagggatatgcaaatttcttagtgtttgttataacaacaagcacttcgttgtttcagtcaaaggatgt 23661719  T
Q  156 aattctatgacttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataaca-tatagaaacgtcttaaaatt 254  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||| || ||   |||||| ||||||||    
T  23661718 aattctatgacttgatttatccttcttgtattcagggacaattgaagctcaacaagtaacttcttcggtagacatagcagtaccaaaacgttttaaaatt 23661619  T
Q  255 gttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaa 354  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
T  23661618 gttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgc--------- 23661528  T
Q  355 gacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
         ||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  23661527 -----ttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 23661468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 121 - 419
Target Start/End: Original strand, 18471799 - 18472096
Alignment:
Q  121 acaacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaataagtaacttctt 220  Q
    |||||||||||||||| ||||||||  || ||||||||||||   ||||||||||| ||  |||||||||| | || | || ||||||||||||||||||    
T  18471799 acaacaagcacttcgtcgtttcagttaaaagatgtaattctagagcttgatttatcattaatgtatttaggtacaacttaacctcaataagtaacttctt 18471898  T
Q  221 cggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgtta 320  Q
    ||||||| |||||||||||||||||||||||||||||||||||  ||||| ||| || ||||||||||||||||||||||||||||||||||||||||||    
T  18471899 cggtagatataacatatagaaacgtcttaaaattgttgtttttgaatttctaaactgatgtatttggatttccaaattctattatctaccgaagttgtta 18471998  T
Q  321 ctaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||||||||||| || | |||||||||||||| || |||||| ||| |||||||||| ||||||||||||||| ||||    
T  18471999 ctaggttgagtcacgaccaggtcgctctctttacgatg-ttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 18472096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 145 - 419
Target Start/End: Original strand, 8887745 - 8888019
Alignment:
Q  145 tcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacg 244  Q
    ||||| |||||||||||||  |||||||||| |||  | |||||| ||| |||| || |||||||||||||||||||| |||||||| || || ||||||    
T  8887745 tcgaaagatgtaattctatagcttgatttattcttaatttatttacggacaattcaacctcaataagtaacttcttcgatagacatagcagatcgaaacg 8887844  T
Q  245 tcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcg 344  Q
    |||||||||||||| |||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8887845 tcttaaaattgttgattttggatttccaaactgttgtatttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcg 8887944  T
Q  345 ctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||| || |||||| |||| |||||| |||||||| ||||| ||||||||||||||| ||||    
T  8887945 ctctctttaagacgttttgttgcactgtccaaaattgtgcaagacagattatcaaccacgccgcctccaggataa 8888019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 252 - 419
Target Start/End: Complemental strand, 23666294 - 23666127
Alignment:
Q  252 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 351  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23666294 attgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 23666195  T
Q  352 taagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  23666194 taagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 23666127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 252 - 419
Target Start/End: Complemental strand, 24038542 - 24038375
Alignment:
Q  252 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 351  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24038542 attgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 24038443  T
Q  352 taagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  24038442 taagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 24038375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 253 - 419
Target Start/End: Original strand, 3672509 - 3672675
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3672509 ttgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 3672608  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||| ||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  3672609 aagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 3672675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 39775897 - 39775732
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39775897 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgctactaggttgagtcacgaccaggtcgctctcttta 39775798  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  39775797 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 39775732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 203 - 419
Target Start/End: Complemental strand, 12966092 - 12965877
Alignment:
Q  203 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 302  Q
    |||||||||||| |||||||||||||||| ||  | |||||||||||||||| ||||||||  |||| ||||  ||||||||||| ||||||||||||||    
T  12966092 ctcaataagtaatttcttcggtagacatagcag-tcgaaacgtcttaaaattattgtttttgaattttcaaaccgttgtatttgggtttccaaattctat 12965994  T
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
     ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||||| |||||||||||||| |||    
T  12965993 gatctaccgaagttgttactagattgagtcacaaccaggtcgctctctttaagacgttttatggcactgcccaaaattgtgcaagacagactatcaacca 12965894  T
Q  403 cgccgcctccagaataa 419  Q
    |||||||||||| ||||    
T  12965893 cgccgcctccaggataa 12965877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 253 - 419
Target Start/End: Original strand, 8883093 - 8883259
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    |||||| |||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8883093 ttgttgattttggatttccaaactgttgtatttggattttcaaattctattatctaccgaagttgttactaggtcgagtcacgaccaggtcgctctcttt 8883192  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||| |||||||| ||||    
T  8883193 aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgctgcctccaggataa 8883259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 758532 - 758372
Alignment:
Q  259 tttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 358  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  758532 tttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacg 758433  T
Q  359 tttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||| ||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  758432 tttcgtggcactacccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 758372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 8069603 - 8069768
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt-atctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8069603 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 8069702  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  8069703 aagacgtttcgtggcactgtccaa-attgtgcaagacagactatcaaccacgccgcctccaggataa 8069768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 18467149 - 18467314
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    ||||||||||  ||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18467149 tgttgtttttgaatttccaaactgatgtatttggattttcaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 18467248  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||| |||||| ||| |||||||| | ||||||||||||||| ||||    
T  18467249 agacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccgcctccaggataa 18467314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 253 - 419
Target Start/End: Original strand, 3418917 - 3419084
Alignment:
Q  253 ttgttgtttttag-atttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 351  Q
    ||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3418917 ttgttgtttttggtatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaagtcgctctctt 3419016  T
Q  352 taagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||| ||| ||| ||||    
T  3419017 taagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccaccttcaggataa 3419084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 251 - 413
Target Start/End: Original strand, 20519975 - 20520137
Alignment:
Q  251 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 350  Q
    ||||||||||||   |||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  20519975 aattgttgttttcgaattttcaaactgttgtatttggatttccaaattctattatctagcgaagttgttactaggttgagtcacgaccaggtcactctct 20520074  T
Q  351 ttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctcca 413  Q
    ||||||||||||||||||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  20520075 ttaagacgtttcgtggcactgcccaagattgtgcaagggagactatcaaccacgccgcctcca 20520137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 14438864 - 14438699
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14438864 tgttgtttttggattcccaaactgttgtatttggatttccaagttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgccctcttta 14438765  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||| ||||    
T  14438764 agacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataa 14438699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 29350164 - 29350329
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  29350164 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccatgtcgctttcttta 29350263  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||| |||||| ||| ||||| |||  ||| ||||||||||| ||||    
T  29350264 agacgtttcgtggcactgcccaaaattgtgcaaggcagaccatctaccatgccgcctccaggataa 29350329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 259 - 411
Target Start/End: Original strand, 3033573 - 3033725
Alignment:
Q  259 tttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 358  Q
    ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3033573 tttttggatttccaaactgtagtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 3033672  T
Q  359 tttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctc 411  Q
    |||| ||||||||||||| |||||| ||| |||||||||| |||| |||||||    
T  3033673 tttcatggcactgcccaaaattgtgcaaggcagactatcaaccacaccgcctc 3033725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 256 - 419
Target Start/End: Complemental strand, 49971591 - 49971428
Alignment:
Q  256 ttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 355  Q
    |||||||| |||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  49971591 ttgtttttggatttccaaactgttgtatttggatttccaagttttattatctaccgaagttgttactaggttgagtcacgaccaggtcgatctctttaag 49971492  T
Q  356 acgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||  |||| |||||| ||| ||||||||||  |||||||||||||| ||||    
T  49971491 acgtttcgtggcactatccaaaattgtgcaaggcagactatcaatcacgccgcctccaggataa 49971428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 254 - 376
Target Start/End: Original strand, 27708803 - 27708924
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  27708803 tgttgttttt-gatttccaaactgttgtatttggatttccaaattctattatataccgaagttgttactaggttgagtcacgaccaggtcgttctcttta 27708901  T
Q  354 agacgtttcgtggcactgcccaa 376  Q
    |||||||||||||||||||||||    
T  27708902 agacgtttcgtggcactgcccaa 27708924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 276 - 419
Target Start/End: Complemental strand, 32474825 - 32474684
Alignment:
Q  276 tgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgccca 375  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  32474825 tgttgtttttggatttccaaattctattatctaccgaagttgttactagattgagccacgaccaggtcgctctc--taagacgtttcgtggcactgccca 32474728  T
Q  376 agattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    | |||||| |||||||||||||| |||||||| |||||| ||||    
T  32474727 aaattgtgcaagacagactatcaaccacgccgtctccaggataa 32474684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 203 - 419
Target Start/End: Complemental strand, 12112873 - 12112645
Alignment:
Q  203 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 302  Q
    |||||| ||||| ||||| |||||||||| ||    ||||||||||||||||||||||||| ||||| ||||  ||||||||||||||| ||||||||||    
T  12112873 ctcaatgagtaaattctttggtagacatagcagtctgaaacgtcttaaaattgttgttttttgatttacaaaccgttgtatttggattttcaaattctat 12112774  T
Q  303 t------------atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagaca 390  Q
    |            |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||  ||||| ||||||    
T  12112773 tttaaaaaggaatatctaccgaagttgttactaggttgaatcacgactaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaagaca 12112674  T
Q  391 gactatcanccacgccgcctccagaataa 419  Q
    |||||||| |||| |||||||||| ||||    
T  12112673 gactatcaaccacaccgcctccaggataa 12112645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 256 - 411
Target Start/End: Original strand, 29715570 - 29715725
Alignment:
Q  256 ttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 355  Q
    |||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  29715570 ttgtttttggatttccaaactgttgtatttagatttccaaattctattatctaccgaagttgttattaggttgagtcacgaccagatcgctctttttaag 29715669  T
Q  356 acgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctc 411  Q
    |||||||||| ||||| |||| ||||||  ||  ||||||||| ||||||||||||    
T  29715670 acgtttcgtgacactgtccaaaattgtgctaggaagactatcaaccacgccgcctc 29715725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 257 - 419
Target Start/End: Original strand, 55431242 - 55431404
Alignment:
Q  257 tgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaaga 356  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||| |||||||||||||||||||    
T  55431242 tgtttttggatttccaaacagttgtatttggatttccaaattctattatctgctgaagttgttattaggttgagtcacgatcaggtcgctctctttaaga 55431341  T
Q  357 cgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||| ||||| | || ||| || ||| |||||||||| ||||||||||||||| ||||    
T  55431342 cgtttcgtgacactgtcaaaaattatgcaaggcagactatcaaccacgccgcctccaggataa 55431404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 254 - 413
Target Start/End: Complemental strand, 3657409 - 3657250
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||| ||| ||||| |||| ||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||  || ||||||||||||    
T  3657409 tgttgtgtttggattttcaaactgttgtatttgaatttctaaattctattatctaccgaagttgttactatgttgagtcacgattagatcgctctcttta 3657310  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctcca 413  Q
    ||||||||||||||||||  ||| |||||| |||||||||||||| ||| ||| ||||||    
T  3657309 agacgtttcgtggcactgttcaaaattgtgcaagacagactatcaaccatgccacctcca 3657250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 304 - 411
Target Start/End: Complemental strand, 12971752 - 12971645
Alignment:
Q  304 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccac 403  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||| |||||| |||||||| |||||  |||    
T  12971752 atctatcgaagttgttactaggttgactcacgaccaggtctctctctttaagacgtttcgtggcattgcccaaaattgtgcaagacagattatcaatcac 12971653  T
Q  404 gccgcctc 411  Q
    ||||||||    
T  12971652 gccgcctc 12971645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 252 - 370
Target Start/End: Complemental strand, 2207878 - 2207760
Alignment:
Q  252 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 351  Q
    |||||||||||| |||||  ||| ||||||||||| ||||  |||||||||||| || ||||||||| ||||| ||||||||||||||||||||||| ||    
T  2207878 attgttgtttttggatttttaaactgttgtatttgaatttttaaattctattatttatcgaagttgtcactagattgagtcacgaccaggtcgctctttt 2207779  T
Q  352 taagacgtttcgtggcact 370  Q
    |||||||||| ||||||||    
T  2207778 taagacgtttagtggcact 2207760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 414
Target Start/End: Original strand, 28125090 - 28125200
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    |||||| |||| |||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||  || |||||| |||||||||||| | |||    
T  28125090 tatctatcgaaattgttactaggttgagtcacgaccaggttgctct-tttaagacatttcgtggcactgcttaaaattgtgcaagacagactattaacca 28125188  T
Q  403 cgccgcctccag 414  Q
    | | ||||||||    
T  28125189 cactgcctccag 28125200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 166 - 308
Target Start/End: Complemental strand, 6606914 - 6606772
Alignment:
Q  166 cttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttag 265  Q
    |||||||||||| | ||||||||||||| ||   || |||||||||||| |||||||||||||||| ||  | ||||||||||||||||||||||||| |    
T  6606914 cttgatttatccatgttgtatttagggacaacgaaacctcaataagtaatttcttcggtagacatagca-gtcgaaacgtcttaaaattgttgtttttgg 6606816  T
Q  266 atttccaaaatgttgta-tttggatttccaaattctattatcta 308  Q
    ||| ||||| || |||| ||||| |||||||||| |||| ||||    
T  6606815 attcccaaactgatgtattttggttttccaaattatattttcta 6606772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 26962050 - 26962150
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaat 417  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | |||| ||||| |||  |||||| ||  ||||||| |||||| ||    
T  26962050 ttactgggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactacacaag-ttgtgcaaggtagactaacaaacacgccgtctccaggat 26962148  T
Q  418 aa 419  Q
    ||    
T  26962149 aa 26962150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 13022024 - 13022118
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||| |||||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  13022024 ggttgagtcacgaccaggtcgctctttttaaaacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 13022118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 25726897 - 25726841
Alignment:
Q  319 tactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgccca 375  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  25726897 tactagattgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccca 25726841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 407
Target Start/End: Complemental strand, 33089441 - 33089359
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccg 407  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||| || ||||| |||  |||||| || ||||||||    
T  33089441 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccctag-ttgtgcaaggtagactaacaaccacgccg 33089359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 404
Target Start/End: Original strand, 48432398 - 48432484
Alignment:
Q  318 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    |||||||| |||||| || || ||||||||||||||||||||||| |||||||||||||| ||||| ||| ||||||||||| |||||    
T  48432398 ttactaggctgagtcgcggactaggtcgctctctttaagacgttttgtggcactgcccaaaattgt-gaaaacagactatcaaccacg 48432484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 245 - 303
Target Start/End: Original strand, 16013635 - 16013693
Alignment:
Q  245 tcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt 303  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||||||||| ||||||    
T  16013635 tcttaaaattgttggttttggatttccaaactgttgtatttggatttccaaagtctatt 16013693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 15768295 - 15768243
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| ||||||    
T  15768295 ttactgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 15768243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 20810369 - 20810463
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||| ||| || ||||| |||  |||||| || |||||||| |||||| ||||    
T  20810369 ggttgagtcacgaccaggtcgttctctttaagacgtttcgcagcactaccctag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 20810463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 419
Target Start/End: Complemental strand, 38437089 - 38436995
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||| |||||| || |||||||||||||||||||||||  ||||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  38437089 ggttgagtcacgatcaggtcactttctttaagacgtttcgtggcactatccaag-ttgtgaaaggtagactaacaaccacgccgtctccaggataa 38436995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 53119524 - 53119606
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccg 407  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||| | |||| ||||| |||  |||||| || ||||||||    
T  53119524 ggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactactcaag-ttgtgcaaggtagactaacaaccacgccg 53119606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 15763125 - 15763082
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  15763125 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 15763082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 20090757 - 20090714
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  20090757 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 20090714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 20095882 - 20095839
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  20095882 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 20095839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 3477041 - 3476950
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  3477041 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 3476950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 17368719 - 17368810
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  17368719 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 17368810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 34129264 - 34129173
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || || |||||| |||  |||||| || || ||||| |||||| ||||    
T  34129264 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 34129173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 419
Target Start/End: Complemental strand, 2617355 - 2617260
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||| |||| |||||| |||||||||||||||| |||||| | | || ||||| |||  |||||| || || |||||||||||| ||||    
T  2617355 ggttgagtcacaaccatgtcgctttctttaagacgtttcgcggcactactcgagtttgtgcaaggtagactaacaaccgcgccgcctccaggataa 2617260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 17364063 - 17364106
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  17364063 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 17364106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 27708959 - 27709025
Alignment:
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||| ||||||||||||| ||| || |||  ||||||||| ||||||||||||||| ||||    
T  27708959 aagacgtttcatggcactgcccaaaattatgcaaggtagactatcaaccacgccgcctccaggataa 27709025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 411
Target Start/End: Complemental strand, 27605240 - 27605147
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctc 411  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||  ||||| ||| || ||||| |||  |||||| || | || |||||||    
T  27605240 ttaccaggttgagtcacgaccaagtcgctctctttaagacatttcgcagcactacccgagtttgtgcaaggtagactaacaactacaccgcctc 27605147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 10321444 - 10321485
Alignment:
Q  329 agtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  10321444 agtcacgaccaggtcgctttctttaagacgtttcgcggcact 10321485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 419
Target Start/End: Complemental strand, 19277040 - 19276924
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    |||||||  ||||||||| || ||||||| || |  ||||  |||| |||||||| ||| ||||||||| | || |||||| |||||||||||||| |||    
T  19277040 tatctactaaagttgttattaagttgagttacaataaggtttctctttttaagactttttgtggcactgtcgaaaattgtgtaagacagactatcaacca 19276941  T
Q  403 cgccgcctccagaataa 419  Q
    ||  ||||| |||||||    
T  19276940 cgttgcctctagaataa 19276924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 54270644 - 54270735
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||| ||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  54270644 tgagtcacgaccaggtcgctttctttaagacatttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 54270735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 55128790 - 55128881
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||| | |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  55128790 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcactacctaag-ttgtgtaaggtagactagcaaccgcgccgtctccaggataa 55128881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 404
Target Start/End: Complemental strand, 48435933 - 48435847
Alignment:
Q  318 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    |||||||| |||||| || || ||||||||||||||||||||||||||| |||||  ||| || ||| ||| |||||||||| |||||    
T  48435933 ttactaggctgagtcgcggactaggtcgctctctttaagacgtttcgtgacactgttcaaaatagtgcaag-cagactatcaaccacg 48435847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 17357836 - 17357879
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||| | |||||||||||||||| ||||||    
T  17357836 tgagtcacgaccaggtcgatttctttaagacgtttcgcggcact 17357879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 30341939 - 30341896
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||| || |||||||||||||||| ||||||    
T  30341939 tgagtcacgaccaggtcactttctttaagacgtttcgcggcact 30341896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 383
Target Start/End: Complemental strand, 1688980 - 1688926
Alignment:
Q  329 agtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtg 383  Q
    |||||||||||||||||| |||||||||||||| | |||||| ||| || |||||    
T  1688980 agtcacgaccaggtcgctttctttaagacgttttgcggcactacccgagtttgtg 1688926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 356
Target Start/End: Complemental strand, 21494399 - 21494369
Alignment:
Q  326 ttgagtcacgaccaggtcgctctctttaaga 356  Q
    |||||||||||||||||||||||||||||||    
T  21494399 ttgagtcacgaccaggtcgctctctttaaga 21494369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 362
Target Start/End: Original strand, 53358239 - 53358277
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttc 362  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  53358239 ggttgagtcacggccaggtcgctttctttaagacgtttc 53358277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 368
Target Start/End: Complemental strand, 3482518 - 3482477
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 368  Q
    |||||||||||||||||||| |||||||||| ||||| ||||    
T  3482518 tgagtcacgaccaggtcgctttctttaagacttttcgcggca 3482477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 357
Target Start/End: Complemental strand, 10586281 - 10586248
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagac 357  Q
    ||||||||||||||||||||||| ||||||||||    
T  10586281 ggttgagtcacgaccaggtcgctttctttaagac 10586248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 4117704 - 4117652
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||| || |||||||||||||||||||| || ||||||| ||||| ||||||    
T  4117704 ttactggggtgagtcacgaccaggtcgctttcgttaagacatttcgcggcact 4117652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 6024110 - 6024162
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||| |||||| ||| ||||||||| |||| |||||||||||||| ||||||    
T  6024110 ttactgggttgattcatgaccaggtctctctttttaagacgtttcgcggcact 6024162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 358
Target Start/End: Complemental strand, 7806656 - 7806616
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacg 358  Q
    |||| |||||||||  |||||||||||||||||||||||||    
T  7806656 ttaccaggttgagttgcgaccaggtcgctctctttaagacg 7806616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 419
Target Start/End: Original strand, 16013724 - 16013799
Alignment:
Q  345 ctctctttaagacgtttcgtggcact-gcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||| ||||  |  || |||||| |||| ||||||||  ||||||||||||||| ||||    
T  16013724 ctctctttaagacgtttcgtgacactatctaaaaattgtgcaagatagactatccaccacgccgcctccaggataa 16013799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 98 - 419
Target Start/End: Complemental strand, 9181052 - 9180728
Alignment:
Q  98 tgaattttttagtgttgttgttt--acaacaagcacttcgttgt-ttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggat 194  Q
    |||||||  ||||||||||||||  | |||||||||| ||| || |||||||    |||||| ||||||  ||||||||||| ||  ||||||||||||     
T  9181052 tgaatttcatagtgttgttgtttttataacaagcactccgtcgtgttcagtcattagatgtatttctatagcttgatttatcgttaatgtatttagggac 9180953  T
Q  195 aattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttcca 294  Q
    ||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||    
T  9180952 aattgaatctcaacaagtaacttcttcggtagacatagcagatagaaacgtcttaaaattgttgtttttgaatttccaaactgttgtatttggattttca 9180853  T
Q  295 aattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagact 394  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||| ||||||    
T  9180852 aattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagact 9180753  T
Q  395 atcanccacgccgcctccagaataa 419  Q
    |||| ||||||||||||||| ||||    
T  9180752 atcaaccacgccgcctccaggataa 9180728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 97 - 413
Target Start/End: Original strand, 30650695 - 30651014
Alignment:
Q  97 gtgaattttttagtgttgttgtttacaac---aagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttaggga 193  Q
    |||||||| |||||||||||||||| |||   || |||||| | ||||||||| || |||||| ||||||  ||||||||||||||  ||| || |||||    
T  30650695 gtgaatttcttagtgttgttgtttataactacaaccacttcatcgtttcagtcaaaagatgtatttctatagcttgatttatccttaatgtgttcaggga 30650794  T
Q  194 taattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttcc 293  Q
     || | || |||||||| ||||||||||||||||| || || || ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  30650795 caacttaacctcaataaataacttcttcggtagacgtagcagatcgaaacgtcttaaaattgttgtttttggatttccaaactgttgtatttggatttcc 30650894  T
Q  294 aaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| |||||    
T  30650895 aaattctattatctaccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagac 30650994  T
Q  394 tatcanccacgccgcctcca 413  Q
    ||||| ||||||||||||||    
T  30650995 tatcaaccacgccgcctcca 30651014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 96 - 419
Target Start/End: Complemental strand, 25478624 - 25478301
Alignment:
Q  96 tgtgaattttttagtgttgttgttt--acaacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttaggga 193  Q
    ||||||||| ||||||||||||||   ||||||| |||||| | ||||||||| || ||||||  |||||  |||||||||||||||||||||||||| |    
T  25478624 tgtgaatttcttagtgttgttgttataacaacaaacacttcctcgtttcagtcaaaagatgtatatctatagcttgatttatccttcttgtatttaggaa 25478525  T
Q  194 taattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttcc 293  Q
     || | || || ||||||||||      ||||||||||||||| |||||||||||||||||||||||||| ||||| |||| | ||||||||||||||||    
T  25478524 caactcaaacttaataagtaac------ggtagacataacataaagaaacgtcttaaaattgttgtttttggattttcaaactattgtatttggatttcc 25478431  T
Q  294 aaattc----tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagac 389  Q
    ||||||    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| ||| |    
T  25478430 aaattcattctattatctaccgaagttgttactaggttgagtcacaaccaggtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaaggc 25478331  T
Q  390 agactatcanccacgccgcctccagaataa 419  Q
    ||||||||| ||||||||||||||||||||    
T  25478330 agactatcaaccacgccgcctccagaataa 25478301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 205 - 419
Target Start/End: Complemental strand, 10160942 - 10160728
Alignment:
Q  205 caataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatta 304  Q
    |||||| |||||||||||||||||||| || |||  ||||||||||||||||||||||| |||||||||| | ||||||||||||||| |||||||||||    
T  10160942 caataattaacttcttcggtagacatagcagataagaacgtcttaaaattgttgtttttggatttccaaactcttgtatttggatttctaaattctatta 10160843  T
Q  305 tctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||| |||||    
T  10160842 tctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacg 10160743  T
Q  405 ccgcctccagaataa 419  Q
    |||||||||| ||||    
T  10160742 ccgcctccaggataa 10160728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 206 - 419
Target Start/End: Original strand, 30658141 - 30658354
Alignment:
Q  206 aataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattat 305  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| |||||||||    
T  30658141 aataagtaacttcttcgatagacataacataaaaaaacgtcttaaaattgttgtttttggatttccaaactgttgtatttgcatttccaagttctattat 30658240  T
Q  306 ctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgc 405  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||| |||||||||| ||||||    
T  30658241 ctaccgaagttgttactatgttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactactcaaaattgtgcaaggcagactatcaaccacgc 30658340  T
Q  406 cgcctccagaataa 419  Q
    ||||||||| ||||    
T  30658341 cgcctccaggataa 30658354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 1935162 - 1934997
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    ||||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1935162 tgttgtttttgaattttcaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 1935063  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  1935062 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 1934997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 9189972 - 9189807
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9189972 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggttgctctcttta 9189873  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||| |||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  9189872 agacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 9189807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 19892635 - 19892470
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19892635 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 19892536  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||| |||||||| |||| |||||| || ||||||||||| ||||||||||||||| ||||    
T  19892535 agacgtttcctggcactgtccaaaattgtgcaacacagactatcaaccacgccgcctccaggataa 19892470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 31326665 - 31326830
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31326665 tgttgtttttggatttccaaaatgttgtaattgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 31326764  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||| || |||||||||| |||||| ||| |||||||||| ||||||| ||||||| ||||    
T  31326765 agacgtttcatgccactgcccaaaattgtgcaaggcagactatcaaccacgccacctccaggataa 31326830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 18344357 - 18344522
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  18344357 tgttgtttttggatttccaaactgttgtatttggattttcaaattctattatcaaccgaagttgttactagattgagtcacgaccaggtcgctctcttta 18344456  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||| |||||| ||| |||||||| | |||||||| |||||| ||||    
T  18344457 agacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccggctccaggataa 18344522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 35601848 - 35602013
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  35601848 tgttgtttttggatttccaaactattgtatttggattttcaaattctattatctaccgaagttgttactaggttgaatcacgaccaggtcgctcttttta 35601947  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||| |||| |||||| |||||||| ||||| ||||||||||||||| ||||    
T  35601948 agacgtttcgtggcactgtccaaaattgtgcaagacagagtatcaaccacgccgcctccaggataa 35602013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 260 - 405
Target Start/End: Original strand, 28603230 - 28603375
Alignment:
Q  260 ttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgt 359  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28603230 ttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaaaacgt 28603329  T
Q  360 ttcgtggcactgcccaagattgtggaagacagactatcanccacgc 405  Q
    |||||| ||||| |||| |||||| |||||||||||||| ||||||    
T  28603330 ttcgtgacactgtccaaaattgtgcaagacagactatcaaccacgc 28603375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 7738020 - 7737855
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    ||||| |||| |||||| | | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  7738020 tgttgattttggatttctatactgttgtatttggattttcaaattctattatccaccgaagttgttactaggttgagtcacgaccatgtcgctctcttta 7737921  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||| |||| |||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  7737920 agaagttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 7737855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 35639166 - 35639001
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||    
T  35639166 tgttgtttttggatttccaaactattgtatttggattttcaaattctattatctaccgaagttgttactaagttgaatcacgatcaggtcgctcttttta 35639067  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||| |||||| |||||||  ||||| ||||||||||||||| ||||    
T  35639066 agacgtttcgtggcactgcccaaaattgtgcaagacagcgtatcaaccacgccgcctccaggataa 35639001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 253 - 420
Target Start/End: Complemental strand, 42926930 - 42926762
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    ||||||||||| ||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  42926930 ttgttgtttttggattttcaaactgtt-tatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgatcaggccgctctcttt 42926832  T
Q  353 aag--acgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataat 420  Q
    |||  ||||||||||||||||||||| |||||| |||  ||||||||| ||||||||||||||| |||||    
T  42926831 aagacacgtttcgtggcactgcccaaaattgtgcaaggtagactatcaaccacgccgcctccaggataat 42926762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 12796851 - 12797016
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||| | ||||||||||| |||| ||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||    
T  12796851 tgttgtttttggatttccacactgttgtatttgaattttcaaattctattatctgccgaagttgttattaggttgagtcacgaccagatcgctctcttta 12796950  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||| |||||||||||||| |||||  |||||||||||||| |||||||| |||||| ||||    
T  12796951 agacgttttgtggcactgcccaaaattgttcaagacagactatcaaccacgccgtctccaggataa 12797016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 29677308 - 29677472
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||| ||||| |||||| ||| ||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||    
T  29677308 tgttatttttggatttc-aaactgttgtatttgaattttcaaattctattatctagcgaagttgttactaggttgagtcacgatcatgtcgctctcttta 29677406  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||| |||||| ||  |||||||||| ||||||||||||||| ||||    
T  29677407 agacgtttcgtggcactgcccaaaattgtgcaaagcagactatcaaccacgccgcctccaggataa 29677472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 30631505 - 30631670
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  30631505 tgttgtttttggatttccaaactgttgtatttggatttccaagttctattatctaccgaagttgttactaggttgagtcacgattaggtcactctcttta 30631604  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    | || |||||||||| |||| || |||||| |||| ||||||||| ||||||| ||||||| ||||    
T  30631605 aaacttttcgtggcattgccaaaaattgtgcaagaaagactatcaaccacgccacctccaggataa 30631670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 25497498 - 25497329
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaa----ttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 349  Q
    |||||||||| |||||||||| | |||||||| ||||||||||    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25497498 tgttgtttttggatttccaaactattgtatttagatttccaaactcattctattatctaccgaaattgttactaggttgagtcacgaccaggtcgctctc 25497399  T
Q  350 tttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||  ||||||||||  ||||| ||| |||||||||| ||||||||||||||| ||||    
T  25497398 tttaagacgtttcgtaacactgcccaaatttgtgcaagtcagactatcaaccacgccgcctccaggataa 25497329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 29677694 - 29677858
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  29677694 tgttgtttttggatttc-aaactgttgtatttggatttccaaattctattatctagcgaagttgttactaggttgagtcacgaccaggtcgctctcatta 29677792  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||| ||| ||||||||||| || |||||| ||| || ||||||| ||| ||||||| ||| ||||    
T  29677793 agacatttagtggcactgccaaaaattgtgcaaggcaaactatcaaccaagccgcctacaggataa 29677858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 15489883 - 15489796
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccagg 341  Q
    |||||||||| ||||||||| |||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15489883 tgttgtttttggatttccaatatgttgtattagaattttcaaattctattatctaccgaagttgttactaggttgagtcacgaccagg 15489796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 303 - 414
Target Start/End: Complemental strand, 19578534 - 19578423
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| || || |||||| |||  ||||||||| |||    
T  19578534 tatctaccgaagttgttattaggttgagtcacgaccagatcgctctctttaagacgttttgtggcactacctaaaattgtgcaaggaagactatcaacca 19578435  T
Q  403 cgccgcctccag 414  Q
     || ||||||||    
T  19578434 tgctgcctccag 19578423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 303 - 408
Target Start/End: Complemental strand, 21523839 - 21523735
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    ||||||| | |||||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||| |||  ||||||||| |||    
T  21523839 tatctactggagttgttaataggttgagtcacgaccaggttgctatctttaa-acgtttcgtggcactgcccaaaattgtgcaagggagactatcaacca 21523741  T
Q  403 cgccgc 408  Q
    ||||||    
T  21523740 cgccgc 21523735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 419
Target Start/End: Complemental strand, 19094614 - 19094499
Alignment:
Q  304 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccac 403  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| |||| ||||||  ||| ||||||||| |||||| ||| || | ||||| ||||    
T  19094614 atctaccgaagttgttattaggttgagtcacgatcaggtcgctctccttaaaacgttttttggtactgcccaaaattgtgcaaggcaaaatatcaaccac 19094515  T
Q  404 gccgcctccagaataa 419  Q
     |||||||||| ||||    
T  19094514 accgcctccaggataa 19094499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 303 - 398
Target Start/End: Original strand, 20711420 - 20711515
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatca 398  Q
    |||||||||||||||||||||||||||||||||||||  || |||  ||||||| ||||||| ||||||| ||| |||||| ||||||||||||||    
T  20711420 tatctaccgaagttgttactaggttgagtcacgaccatatcactccttttaagatgtttcgtagcactgctcaaaattgtgcaagacagactatca 20711515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 306 - 412
Target Start/End: Complemental strand, 40847712 - 40847606
Alignment:
Q  306 ctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgc 405  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||||||||| |||||||||  |||  ||||| ||| || ||||||| ||||||    
T  40847712 ctaccgaagttgttactagattgagtcacgaccatgtcgttctctttaagacgttttgtggcactgttcaaagttgtgcaaggcaaactatcaaccacgc 40847613  T
Q  406 cgcctcc 412  Q
    | |||||    
T  40847612 cacctcc 40847606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 42914639 - 42914733
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| || ||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  42914639 ggttgagtcacgaccaggtcgttctctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 42914733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 419
Target Start/End: Original strand, 5089277 - 5089369
Alignment:
Q  326 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||  ||||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  5089277 ttgagtcatgaccaggtcgctctctttaagacgtttcgcggcactatccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 5089369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 30655389 - 30655487
Alignment:
Q  96 tgtgaattttttagtgttgttgttt--acaacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttaggga 193  Q
    ||||||||| ||||||||||||||   |||||||  ||||| ||||| |||||||| |||||| || |||  ||||||||||||||||||||||||||||    
T  30655389 tgtgaatttcttagtgttgttgttataacaacaaa-acttcattgttacagtcgaaagatgtatttatatagcttgatttatccttcttgtatttaggga 30655487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 412
Target Start/End: Original strand, 160031 - 160125
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctcc 412  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||  | |||| ||||| |||||| |||  || |||||| || || |||||||    
T  160031 ttactaggttgagacacgaccaggtcgctctctttaatacgtttcacgacactacccaaaattgtgcaaggtaggctatcaaccgcgtcgcctcc 160125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 42723546 - 42723503
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  42723546 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 42723503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 42728715 - 42728672
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  42728715 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 42728672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 44096302 - 44096345
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  44096302 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 44096345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 44754691 - 44754648
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  44754691 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 44754648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 44759857 - 44759814
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  44759857 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 44759814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 303 - 411
Target Start/End: Complemental strand, 17545419 - 17545310
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct-ttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancc 401  Q
    ||||||||||||||||||||||||||||| |||| ||||||| | | | ||||||||||||||| ||||   |||  ||||| || | ||||||||| ||    
T  17545419 tatctaccgaagttgttactaggttgagttacgatcaggtcgttttttcttaagacgtttcgtgacacttttcaaagttgtgcaaaaaagactatcaacc 17545320  T
Q  402 acgccgcctc 411  Q
    ||||| ||||    
T  17545319 acgccacctc 17545310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 298
Target Start/End: Complemental strand, 40847780 - 40847735
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaatt 298  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||    
T  40847780 ttgttgtttttagattttcaaactgttgtatttggatttccaaatt 40847735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 404
Target Start/End: Original strand, 14104580 - 14104666
Alignment:
Q  318 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    |||||||| |||||| || || ||||||||||||||||||||||||||| |||||| ||| |||||| || ||| ||||||| |||||    
T  14104580 ttactaggctgagtcgcggactaggtcgctctctttaagacgtttcgtgtcactgctcaaaattgtgcaa-acaaactatcaaccacg 14104666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 30618600 - 30618672
Alignment:
Q  121 acaacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttaggga 193  Q
    |||||||||||||| |||||||||||||| ||||||  |||||    |||||||||||| |||||||||||||    
T  30618600 acaacaagcacttcattgtttcagtcgaaagatgtatatctatagtctgatttatccttgttgtatttaggga 30618672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 40518567 - 40518524
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  40518567 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 40518524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 30628594 - 30628678
Alignment:
Q  107 tagtgttgttgttt--acaacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtattta 189  Q
    |||||||||| |||  |||||||||||||| |||||||||||||| |||||| ||||||    ||||||||| || |||||||||    
T  30628594 tagtgttgttatttgaacaacaagcacttcattgtttcagtcgaaagatgtatttctatagtctgatttatctttgttgtattta 30628678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 303
Target Start/End: Original strand, 30628762 - 30628822
Alignment:
Q  243 cgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt 303  Q
    |||||||||| ||||| |||| | |||||||| ||||||||||||||||| ||||| ||||    
T  30628762 cgtcttaaaaatgttggtttttggtttccaaattgttgtatttggatttcaaaattatatt 30628822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 362
Target Start/End: Original strand, 39542900 - 39542936
Alignment:
Q  326 ttgagtcacgaccaggtcgctctctttaagacgtttc 362  Q
    ||||||||||| |||||||||||||||||||||||||    
T  39542900 ttgagtcacgatcaggtcgctctctttaagacgtttc 39542936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 404
Target Start/End: Complemental strand, 44957542 - 44957456
Alignment:
Q  318 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    |||||||| ||||||| | || |||||| |||||||||||||||| ||||||||||  || |||||| ||| |||||||||| |||||    
T  44957542 ttactaggctgagtcatggactaggtcgttctctttaagacgttttgtggcactgcaaaaaattgtgcaag-cagactatcaaccacg 44957456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 28751824 - 28751781
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||    
T  28751824 tgagtcacgaccaggtcgctttcttttagacgtttcgcggcact 28751781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 362
Target Start/End: Original strand, 19538382 - 19538420
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttc 362  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  19538382 ggttgagtcacgaccaggtcgctttctttaagacatttc 19538420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 357
Target Start/End: Complemental strand, 6297984 - 6297951
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagac 357  Q
    ||||||||||||||||||||||| ||||||||||    
T  6297984 ggttgagtcacgaccaggtcgctttctttaagac 6297951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 39542610 - 39542566
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 362  Q
    |||| ||||||||||||||| | ||| ||||||||||||||||||    
T  39542610 ttaccaggttgagtcacgactaagtcactctctttaagacgtttc 39542566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 269
Target Start/End: Complemental strand, 39542684 - 39542652
Alignment:
Q  237 tagaaacgtcttaaaattgttgtttttagattt 269  Q
    |||||||||||||||||||||||||| ||||||    
T  39542684 tagaaacgtcttaaaattgttgttttcagattt 39542652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 39542825 - 39542857
Alignment:
Q  237 tagaaacgtcttaaaattgttgtttttagattt 269  Q
    |||||||||||||||||||||||||| ||||||    
T  39542825 tagaaacgtcttaaaattgttgttttcagattt 39542857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 181; Significance: 1e-97; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 45 - 419
Target Start/End: Original strand, 82779 - 83157
Alignment:
Q  45 gagataattttctatccacaattaatttcacgttttaccattgaaagcgat-tgtgaattttttagtgttgttgttt--acaacaagcacttcgttgttt 141  Q
    |||| |||||||||||||||||||| | |||| ||||||||| |||| ||  ||||||||| ||||||||||||||   ||||||| |||||| ||||||    
T  82779 gagacaattttctatccacaattaactccacgctttaccattaaaagtgacatgtgaatttcttagtgttgttgttataacaacaaacacttcattgttt 82878  T
Q  142 cagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaa 241  Q
    |||| |||  ||||| |||||| ||||||||||| ||| || ||||||||||||| |||| || ||||||||||||||||||||||||| |||  | |||    
T  82879 cagtggaaaaatgtatttctataacttgatttattcttgttttatttagggataactgaaccttaataagtaacttcttcggtagacatgacagtttgaa 82978  T
Q  242 acgtcttaaaattgttgtttttagatttccaaaatgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccag 340  Q
    |||| ||||||||||||||||| |||||| ||| |||||||||| || |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  82979 acgttttaaaattgttgtttttggatttctaaactgttgtattttggttttccaaattctgttttctaccgaagttgttactaggttgagtcacgaccag 83078  T
Q  341 gtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||| |||  ||||| ||| || ||| |||||||||| ||| ||||||||||| ||||    
T  83079 gtcgctctctttaagacgtttcgtgacaccacccaaaattatgcaaggcagactatcaaccatgccgcctccaggataa 83157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 3e-86; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 100 - 413
Target Start/End: Original strand, 8268063 - 8268378
Alignment:
Q  100 aattttttagtgttgttgttta--caacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataat 197  Q
    ||||| |||||||||||||| |  ||||||||||||| | |||| ||||||| || ||| ||||||  ||||||||||| || || ||||| |||| ||     
T  8268063 aatttcttagtgttgttgttgaaacaacaagcacttcatcgttttagtcgaaagacgtatttctatagcttgatttatcattgttttatttcgggacaac 8268162  T
Q  198 tgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaat 297  Q
      || | |||| ||||| |||||||||||||||| || || ||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  8268163 ataaccacaattagtaatttcttcggtagacatagcagatcgaaacgtcttaaaattgttgtttttggatttccaaactgttgtatttgcatttccaaat 8268262  T
Q  298 tctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatc 397  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||||||    
T  8268263 tctattatctaccgaagttgttactatattgagtcacgaccaggtcgctctctttaagacgttttgtggcactgtccaaaattgtgcaagacagactatc 8268362  T
Q  398 anccacgccgcctcca 413  Q
    | ||||||| ||||||    
T  8268363 aaccacgccacctcca 8268378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 4930158 - 4930324
Alignment:
Q  254 tgttgtttttaga-tttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    |||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4930158 tgttgttttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 4930257  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||| |||||| ||| || ||||||| ||||||||||||||| ||||    
T  4930258 aagacgtttcgtggcactgcccaaaattgtgtaagtcatactatcaaccacgccgcctccaggataa 4930324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 251 - 419
Target Start/End: Complemental strand, 9651140 - 9650971
Alignment:
Q  251 aattgttgtttttagatttccaaaatgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 349  Q
    ||||||||||||| ||||| |||| |||||||||| || |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  9651140 aattgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 9651041  T
Q  350 tttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  9651040 tttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 9650971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 206 - 419
Target Start/End: Complemental strand, 13314453 - 13314240
Alignment:
Q  206 aataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattat 305  Q
    |||||||||||| |  | |||||||| || ||  ||||||||||||||| |||||||| | |||||||| |||||||||||||||||||||||||| |||    
T  13314453 aataagtaacttatatgatagacatagcagattaaaacgtcttaaaattattgtttttgggtttccaaactgttgtatttggatttccaaattctactat 13314354  T
Q  306 ctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgc 405  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||| |||  ||||||||| |||||     
T  13314353 ctaccgtagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggtactgcccaaaattgtgcaaggtagactatcagccacgt 13314254  T
Q  406 cgcctccagaataa 419  Q
    ||||||||| ||||    
T  13314253 cgcctccaggataa 13314240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 26341135 - 26341290
Alignment:
Q  264 agatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcg 363  Q
    |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26341135 agattttcaaactgttgtatttggatttccaaaatctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacatttcg 26341234  T
Q  364 tggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  26341235 tggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 26341290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 8075975 - 8076141
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    |||||||||| |||||||||| |||||||||| || ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  8075975 tgttgtttttggatttccaaactgttgtattttggttttccaaattctattatctactgaagttgttactgggttgagtcacgaccaggtcgctctcttt 8076074  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||| || |||||| |||||||||||||| |||||| |||||||| ||||    
T  8076075 aagacgtttcgtggcactgcctaaaattgtgcaagacagactatcaaccacgctgcctccaggataa 8076141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 138 - 396
Target Start/End: Original strand, 30256665 - 30256922
Alignment:
Q  138 gtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataattgaagc-tcaataagtaacttcttcggtagacataacata 236  Q
    |||||||||||| |||||| ||||||  |||||||||||||| || |||||||||| ||  ||||| ||||||||||| ||||||| ||||||||  |      
T  30256665 gtttcagtcgaaagatgtatttctatagcttgatttatccttgttttatttagggacaac-gaagcctcaataagtaatttcttcgatagacatattag- 30256762  T
Q  237 tagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacga 336  Q
    | |||||||||| |||||||||||||| |||||  ||| | |||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||    
T  30256763 tcgaaacgtcttcaaattgttgtttttggatttataaactattgtatttggatttgcaaattctattatctaccgaagtttttacaaggttgagtcacga 30256862  T
Q  337 ccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactat 396  Q
    |||| ||||| | |||||||| |||||||||||||||||| |||||| ||  ||||||||    
T  30256863 ccagatcgctgtttttaagacatttcgtggcactgcccaaaattgtgcaaagcagactat 30256922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 275 - 419
Target Start/End: Complemental strand, 44510825 - 44510681
Alignment:
Q  275 atgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgccc 374  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||    
T  44510825 atgttgtttttgtatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccagattgctctctttaagacgttttgtggcactgtcc 44510726  T
Q  375 aagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    || |||||| |||||||||||||| ||||||||||||||| ||||    
T  44510725 aaaattgtgcaagacagactatcaaccacgccgcctccaggataa 44510681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 203 - 419
Target Start/End: Complemental strand, 10388596 - 10388371
Alignment:
Q  203 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 302  Q
    |||||||||||| ||||||| |||||||||||  || |||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  10388596 ctcaataagtaatttcttcgatagacataacagtta-aaacgtcttaaaattgttgtttttagattttcaagctgttgtatttggatttccaaattctat 10388498  T
Q  303 t------------atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagaca 390  Q
    |            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| | || |    
T  10388497 tttgaaaaagaatatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgtggcattgcccaag-ttgtgcatgata 10388399  T
Q  391 gactatcanccacgccgcctccagaataa 419  Q
    ||| |||| | ||||||||||||| ||||    
T  10388398 gac-atcaacaacgccgcctccaggataa 10388371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 253 - 419
Target Start/End: Complemental strand, 44423308 - 44423141
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttcc-aaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 351  Q
    ||||||||||| ||||| |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||    
T  44423308 ttgttgtttttggattttcaaactgttgtatttggatttcccaaattctattatctaccaaagttgttactaggttgagtcacgatcagatcgctctctt 44423209  T
Q  352 taagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||| |||||  ||| |||||||||| | ||||||||||||| ||||    
T  44423208 taagacgtttcgtggcactgaccaaaattgttcaaggcagactatcaactacgccgcctccaggataa 44423141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 257 - 406
Target Start/End: Complemental strand, 42627364 - 42627214
Alignment:
Q  257 tgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttact-aggttgagtcacgaccaggtcgctctctttaag 355  Q
    |||||||  ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  42627364 tgtttttgaatttccaaactgttgtatttgaatttccaaattctattatctaccgaagttgttacttaggttgattcacgaccaggtcgctctctttaag 42627265  T
Q  356 acgtttcgtggcactgcccaagattgtggaagacagactatcanccacgcc 406  Q
    ||||||||||||||  ||||| |||||| ||  |||||||||| |||||||    
T  42627264 acgtttcgtggcacaacccaaaattgtgcaaagcagactatcaaccacgcc 42627214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 304 - 419
Target Start/End: Original strand, 4579484 - 4579599
Alignment:
Q  304 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccac 403  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||| ||||    
T  4579484 atctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccac 4579583  T
Q  404 gccgcctccagaataa 419  Q
    ||||||||||| ||||    
T  4579584 gccgcctccaggataa 4579599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 304 - 419
Target Start/End: Complemental strand, 23247052 - 23246937
Alignment:
Q  304 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccac 403  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||| |||||||||| ||||    
T  23247052 atctaccgaagttgttactagattgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccac 23246953  T
Q  404 gccgcctccagaataa 419  Q
    ||||||||||| ||||    
T  23246952 gccgcctccaggataa 23246937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 174 - 419
Target Start/End: Original strand, 21671030 - 21671286
Alignment:
Q  174 atccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaa 273  Q
    |||||||||||||||| ||| ||  ||| |||||||||||| |||||||||||||||| ||  | ||||||||||||||||||||||||| |||||||||    
T  21671030 atccttcttgtatttaaggacaacagaatctcaataagtaatttcttcggtagacatagcag-tcgaaacgtcttaaaattgttgtttttggatttccaa 21671128  T
Q  274 aatgttgtatttggatttccaaattctat------------tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttt 361  Q
    |   || ||||||||||||||||||||||            ||||| | ||||||||||||||||||||||||||| ||| | |||||||||||| ||||    
T  21671129 acaattttatttggatttccaaattctattttgaaatagaatatctgctgaagttgttactaggttgagtcacgactaggaccctctctttaagaagttt 21671228  T
Q  362 cgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
     ||||||||||||||  ||||| ||| ||||| |||| | ||  ||| ||||||||||    
T  21671229 agtggcactgcccaaagttgtgcaaggcagacaatcaacaacttcgcatccagaataa 21671286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 260 - 410
Target Start/End: Original strand, 27238173 - 27238324
Alignment:
Q  260 ttttagatttccaaaatgttgtatttggatttc-caaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 358  Q
    |||| |||||| ||| | ||||||||||||||  |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27238173 ttttggatttctaaactattgtatttggatttttcaaactctattatctatggaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 27238272  T
Q  359 tttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcct 410  Q
    ||| |||||||||| ||| |||||| ||| ||||||||||  ||||||||||    
T  27238273 ttttgtggcactgctcaaaattgtgtaaggcagactatcaatcacgccgcct 27238324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 325 - 419
Target Start/End: Original strand, 23866065 - 23866159
Alignment:
Q  325 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||    
T  23866065 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 23866159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 303 - 413
Target Start/End: Complemental strand, 3357752 - 3357642
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||  ||||| ||| |||||||||| |||    
T  3357752 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgcggtacagcccaaagttgtgcaaggcagactatcaacca 3357653  T
Q  403 cgccgcctcca 413  Q
    ||||| |||||    
T  3357652 cgccgtctcca 3357642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 307 - 413
Target Start/End: Original strand, 29150913 - 29151019
Alignment:
Q  307 taccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgcc 406  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| ||| |||||| ||| || ||||||| ||||| |    
T  29150913 taccgaagttgttactaggttgagtcacgaccagatcgctctttttaagacgtttcgtgacactgctcaaaattgtgcaaggcaaactatcaaccacgtc 29151012  T
Q  407 gcctcca 413  Q
    |||||||    
T  29151013 gcctcca 29151019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 3879922 - 3880089
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactagg-ttgagtcacgaccaggtcgctctcttt 352  Q
    ||||||| || |||||  ||| |||||||||| ||||||||||||||||| || |||||| ||||||||||| ||||||||||| |||||| || |||||    
T  3879922 tgttgttcttggatttttaaattgttgtattttgatttccaaattctattttccaccgaatttgttactaggtttgagtcacgatcaggtcactttcttt 3880021  T
Q  353 aagacgtttcgtggcactgcccaaga-ttgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||| ||| |||||  ||| | ||||| |||  ||||||||| ||||||||||||||| ||||    
T  3880022 aagacgttttgtgacactgttcaaaatttgtgtaaggaagactatcaaccacgccgcctccaggataa 3880089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 419
Target Start/End: Original strand, 12254054 - 12254170
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||||||||||| |||| ||||||||||| ||  ||||| ||| ||||||||||  ||    
T  12254054 tatctatcgaagttgttaccaggttgagtcgcgaccaggtcgctctctttaagatgttttgtggcactgcctaaagttgtgcaaggcagactatcaatca 12254153  T
Q  403 cgccgcctccagaataa 419  Q
    |||||||| ||| ||||    
T  12254154 cgccgcctacaggataa 12254170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 16372381 - 16372467
Alignment:
Q  311 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatca 398  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||| ||| ||||||||||||||    
T  16372381 gaagttgttactaggttgagtcacgaccaagtcgctctctttaagatgtttcgtggcact-accaagatcgtgcaagacagactatca 16372467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 310 - 419
Target Start/End: Complemental strand, 25543475 - 25543366
Alignment:
Q  310 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcc 409  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||||||||||||| |||||| || |||||| |||| | ||||||| ||||  ||||    
T  25543475 cgaagttgttactaggttgagtcacaatcaggtcgcactctttaagacgtttcgtggtactgcctaaaattgtgcaagataaactatcaaccacatcgcc 25543376  T
Q  410 tccagaataa 419  Q
    ||||| ||||    
T  25543375 tccaggataa 25543366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 398
Target Start/End: Complemental strand, 26287339 - 26287183
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattat------------ctaccgaagttgttactaggttgagtcacgaccagg 341  Q
    |||||||||| |||||| ||| |||||||||||||||||||||||||||| |            |||||||||||||||||||||||||||||||||| |    
T  26287339 tgttgtttttggatttcaaaactgttgtatttggatttccaaattctattttgaaaaataatctctaccgaagttgttactaggttgagtcacgaccatg 26287240  T
Q  342 tcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatca 398  Q
     |||| ||||||||| ||||  ||||| || |||| |||||| ||| ||||||||||    
T  26287239 ccgctttctttaagatgttttttggcattgtccaaaattgtgtaaggcagactatca 26287183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 303 - 414
Target Start/End: Original strand, 15642209 - 15642320
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    |||||||||||||||||||    ||| ||||||| ||||||||||| ||||||||||||| || ||||  |||| ||||||||||||| ||||||| | |    
T  15642209 tatctaccgaagttgttacagaattgtgtcacgatcaggtcgctctttttaagacgtttcatgacactatccaaaattgtggaagacaaactatcaacta 15642308  T
Q  403 cgccgcctccag 414  Q
    || |||||||||    
T  15642309 cgtcgcctccag 15642320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 307 - 398
Target Start/End: Original strand, 9008142 - 9008233
Alignment:
Q  307 taccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatca 398  Q
    |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| |||| | ||| |||||| ||| ||| ||||||    
T  9008142 taccaaagttgttactaggttgagtcacgaccatgtccctctctttaagacgtttagtgacactactcaaaattgtgcaaggcaggctatca 9008233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 24528351 - 24528445
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||||||||||||||||| | |||| | |||||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  24528351 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggcattacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 24528445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 9973459 - 9973553
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||  ||||| ||||| |||  |||| | || |||||||| |||||| ||||    
T  9973459 ggttgagtcacgaccaggtcgctttctttaagacgtttcgcggcactatccaag-ttgtgcaaggtagacgaacaaccacgccgtctccaggataa 9973553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 33238002 - 33238045
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  33238002 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 33238045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 47998975 - 47999018
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  47998975 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 47999018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 402
Target Start/End: Complemental strand, 29478236 - 29478176
Alignment:
Q  341 gtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    ||||||||||| |||||||||||||||||||||||| |||||| || ||||||||||| |||    
T  29478236 gtcgctctcttcaagacgtttcgtggcactgcccaaaattgtgcaa-acagactatcaacca 29478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 16539507 - 16539416
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  16539507 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 16539416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 16626155 - 16626246
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  16626155 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 16626246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 33226416 - 33226457
Alignment:
Q  329 agtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  33226416 agtcacgaccaggtcgctctctttaagacgtttcgcggcact 33226457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 42571945 - 42572036
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  42571945 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 42572036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 19640102 - 19640193
Alignment:
Q  171 tttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgttttt 263  Q
    ||||||||| ||||||||||||| ||   ||  ||||||||||| |||||||||||||||| ||  | ||||| |||||||||||||||||||    
T  19640102 tttatcctttttgtatttagggacaacgaaacttcaataagtaatttcttcggtagacatagca-gttgaaacatcttaaaattgttgttttt 19640193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 419
Target Start/End: Complemental strand, 28292600 - 28292507
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||| |||||||||||||||||||| |||||||||||||| ||||||  ||||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  28292600 ggttaagtcacgaccaggtcgctct-tttaagacgtttcgcggcactatccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 28292507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 21081136 - 21081093
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  21081136 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 21081093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 32212749 - 32212706
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  32212749 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 32212706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 33243179 - 33243222
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||    
T  33243179 tgagtcacgaccaggtcactctctttaagacgtttcgcggcact 33243222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 47177214 - 47177171
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  47177214 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 47177171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 47993800 - 47993843
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||| |||||||||||||||||||||||||||| ||||||    
T  47993800 tgagtcacaaccaggtcgctctctttaagacgtttcgcggcact 47993843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 2234725 - 2234634
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||| ||| |||||||||||||||| |||||| || || |||||| |||  |||||| || || ||||| |||||| ||||    
T  2234725 tgagtcacgaccaggttgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 2234634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 419
Target Start/End: Complemental strand, 6591054 - 6590987
Alignment:
Q  352 taagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||| ||||||||| | || |||||| ||| |||||||||| ||||||||||| ||| ||||    
T  6591054 taagacgttttgtggcactgtctaaaattgtgcaaggcagactatcaaccacgccgccttcaggataa 6590987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 403
Target Start/End: Complemental strand, 6898461 - 6898376
Alignment:
Q  318 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccac 403  Q
    |||||||| |||||| || || || ||||||||||||||| |||| ||||||||| |||| |||||| ||| |||||||||| ||||    
T  6898461 ttactaggctgagtcgcggactagatcgctctctttaagatgttttgtggcactgtccaaaattgtgcaag-cagactatcaaccac 6898376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 12934397 - 12934440
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||    
T  12934397 tgagtcacgaccaggtcgctttctttaagacatttcgcggcact 12934440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 17495403 - 17495446
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| | |||||||||||||| ||||||    
T  17495403 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcact 17495446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 17557811 - 17557768
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| | |||||||||||||| ||||||    
T  17557811 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcact 17557768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 22857782 - 22857739
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||    
T  22857782 tgagtcacgatcaggtcgctttctttaagacgtttcgcggcact 22857739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 362
Target Start/End: Original strand, 43892858 - 43892893
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttc 362  Q
    |||||||||||||||||||| |||||||||||||||    
T  43892858 tgagtcacgaccaggtcgctttctttaagacgtttc 43892893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 299
Target Start/End: Original strand, 3045489 - 3045534
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattc 299  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||    
T  3045489 ttgttgtttttcgatttt-aaaatgttgtatttggatttccaaattc 3045534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 296
Target Start/End: Original strand, 3284660 - 3284702
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaa 296  Q
    |||||||||| |||||| |||||||||||||| ||||||||||    
T  3284660 tgttgtttttggatttctaaaatgttgtatttcgatttccaaa 3284702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 21670968 - 21671020
Alignment:
Q  98 tgaattttttagtgttgttgt--ttacaacaagcacttcgttgtttcagtcga 148  Q
    |||||||||||||||||||||  | |||||||||||||| |||||| ||||||    
T  21670968 tgaattttttagtgttgttgttataacaacaagcacttcattgtttgagtcga 21671020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 357
Target Start/End: Original strand, 27256239 - 27256272
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagac 357  Q
    ||||||||||||||||||||||| ||||||||||    
T  27256239 ggttgagtcacgaccaggtcgctttctttaagac 27256272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 249 - 419
Target Start/End: Original strand, 7025 - 7195
Alignment:
Q  249 aaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct 348  Q
    |||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7025 aaaactgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct 7124  T
Q  349 ctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  7125 ctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 7195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 10056 - 9891
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10056 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 9957  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  9956 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 9891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 135; Significance: 3e-70; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 4000 - 4165
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4000 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 4099  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||| |||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  4100 agacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 4165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 444102 - 443960
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    ||||||||||| |||||  ||| | ||||||||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||| | |||             
T  444102 ttgttgtttttggatttttaaactcttgtatttgtattttcaaattctattatttaccgaagttgttactaggttgaatcacgacgaagtc--------- 444012  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccg 407  Q
      ||||||||||||||||| |||| |||||| ||| |||||||||| ||||||||    
T  444011 --gacgtttcgtggcactg-ccaaaattgtgcaaggcagactatcaaccacgccg 443960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 8e-65; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 251 - 419
Target Start/End: Complemental strand, 6408032 - 6407864
Alignment:
Q  251 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 350  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6408032 aattgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgatcaggtcgctctct 6407933  T
Q  351 ttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    | |||||||||||||||||||||||| |||||  ||  |||||||||| ||||||||||||||| ||||    
T  6407932 tgaagacgtttcgtggcactgcccaaaattgtacaaagcagactatcaaccacgccgcctccaggataa 6407864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 253 - 419
Target Start/End: Original strand, 8747707 - 8747873
Alignment:
Q  253 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  8747707 ttgttgtttttggatttacaaactgttgtatttggatttccaaattctattatctattgaagttgttactaggttgagtcacgaccaggtcgctctcttt 8747806  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||| |||| |||||||||| |||||| ||||||| |||||| | ||||||||||||| ||||    
T  8747807 aagacgttccgtgacactgcccaaaattgtgcaagacaggctatcaacaacgccgcctccaggataa 8747873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 266 - 419
Target Start/End: Complemental strand, 11570906 - 11570753
Alignment:
Q  266 atttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 365  Q
    |||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11570906 attttcaaactgttgtatttggatttcgaaattctattatctaccgaagttgttactaggttgagtcacaaccaggtcgctctctttaagacgtttcgtg 11570807  T
Q  366 gcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||| |||||| ||| ||||| |||| ||||||||||||||| ||||    
T  11570806 gcactgcccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataa 11570753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 166 - 409
Target Start/End: Complemental strand, 25316827 - 25316580
Alignment:
Q  166 cttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtctt-aaaattgttgttttta 264  Q
    |||||||||||||| ||||||||||||| || | ||  | ||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||     
T  25316827 cttgatttatcctttttgtatttagggacaacttaactttaat-agtaacttcttcggtagacataacataaagaaacgtcttaaaaattgttgtttttg 25316729  T
Q  265 gatttccaaaatgttgtatttggatttccaa----attctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtt 360  Q
     ||||||||| | || |||||||||||||||    |||||||||||||||||| |||||||||| ||||||| ||||||||||||||  |||||||||||    
T  25316728 aatttccaaactattatatttggatttccaaattcattctattatctaccgaaattgttactagattgagtcgcgaccaggtcgctcaatttaagacgtt 25316629  T
Q  361 tcgtggcactgcccaagattgtggaagacagactatcanccacgccgcc 409  Q
    | |||||||||||||| |||||| ||  || ||||| | ||||||||||    
T  25316628 ttgtggcactgcccaaaattgtgcaaagcaaactatgaaccacgccgcc 25316580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 166 - 409
Target Start/End: Complemental strand, 26204321 - 26204074
Alignment:
Q  166 cttgatttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtctt-aaaattgttgttttta 264  Q
    |||||||||||||| ||||||||||||| || | ||  | ||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||     
T  26204321 cttgatttatcctttttgtatttagggacaacttaactttaat-agtaacttcttcggtagacataacataaagaaacgtcttaaaaattgttgtttttg 26204223  T
Q  265 gatttccaaaatgttgtatttggatttccaa----attctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtt 360  Q
     ||||||||| | || |||||||||||||||    |||||||||||||||||| |||||||||| ||||||| ||||||||||||||  |||||||||||    
T  26204222 aatttccaaactattatatttggatttccaaattcattctattatctaccgaaattgttactagattgagtcgcgaccaggtcgctcaatttaagacgtt 26204123  T
Q  361 tcgtggcactgcccaagattgtggaagacagactatcanccacgccgcc 409  Q
    | |||||||||||||| |||||| ||  || ||||| | ||||||||||    
T  26204122 ttgtggcactgcccaaaattgtgcaaagcaaactatgaaccacgccgcc 26204074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 254 - 398
Target Start/End: Original strand, 19674239 - 19674383
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| ||||| |||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  19674239 tgttgtttttggattttcaaactgttgtatttggattttcaaattctattatttaccgaagttgttactaggttgagtcacgaccaggtcactctcttta 19674338  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatca 398  Q
    ||||||||| ||||||||||||| |||||| ||||||||||||||    
T  19674339 agacgtttcatggcactgcccaaaattgtgcaagacagactatca 19674383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 256 - 419
Target Start/End: Original strand, 12688899 - 12689062
Alignment:
Q  256 ttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 355  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||    
T  12688899 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcatgaccaggtcactctctttaag 12688998  T
Q  356 acgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||| |||  ||||||||| |||||| ||| |||||||||| |||||||| |||||| ||||    
T  12688999 acgttttgtgatactgcccaaaattgtgcaaggcagactatcaaccacgccgtctccaggataa 12689062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 280 - 419
Target Start/End: Complemental strand, 2700249 - 2700110
Alignment:
Q  280 gtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagat 379  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| ||    
T  2700249 gtatttggattttcaaattctactatctaccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgttcaaaat 2700150  T
Q  380 tgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||| |||||||||||||| ||||||||| ||||| ||||    
T  2700149 tgtgcaagacagactatcaaccacgccgcttccaggataa 2700110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 252 - 419
Target Start/End: Original strand, 21308958 - 21309122
Alignment:
Q  252 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 351  Q
    |||||||||||| ||||| |||| |||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||||||    
T  21308958 attgttgtttttggattttcaaactgt---atttggatttccaaattctattatctatcgaagttgttactaggttgagtcactaccatatcgctctctt 21309054  T
Q  352 taagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||| ||||||||||||| |||||| ||  |||||||||| ||||||||||||||| ||||    
T  21309055 taagacgtttcatggcactgcccaaaattgtgcaatgcagactatcaaccacgccgcctccaggataa 21309122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 33687772 - 33687607
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| |||||||||| ||||||||||||||||  ||||| | |||||||||||| |||||| |||||||||| || ||||||||||||||||||    
T  33687772 tgttgtttttggatttccaaactgttgtatttggatttttaaattttgttatctaccgaaattgttattaggttgagttaccaccaggtcgctctcttta 33687673  T
Q  354 agacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||| |||| |||||| |||||||||||||| ||| |||| |||||| ||||    
T  33687672 agacgtttcgtggcactggccaaaattgtgcaagacagactatcaaccatgccgtctccaggataa 33687607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 254 - 365
Target Start/End: Complemental strand, 11534847 - 11534736
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| ||||| |||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  11534847 tgttgtttttggattttcaaactgttgtatttggatttcgaaattctattatctactgaagttgttactaggttgagtcaagaccaggtcgctctcttta 11534748  T
Q  354 agacgtttcgtg 365  Q
    ||||||||||||    
T  11534747 agacgtttcgtg 11534736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 254 - 365
Target Start/End: Complemental strand, 11560357 - 11560246
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 353  Q
    |||||||||| ||||| |||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  11560357 tgttgtttttggattttcaaactgttgtatttggatttcgaaattctattatctactgaagttgttactaggttgagtcaagaccaggtcgctctcttta 11560258  T
Q  354 agacgtttcgtg 365  Q
    ||||||||||||    
T  11560257 agacgtttcgtg 11560246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 260 - 376
Target Start/End: Original strand, 11427975 - 11428091
Alignment:
Q  260 ttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgt 359  Q
    |||| |||||||||| | |||||||||||||| |||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  11427975 ttttggatttccaaactattgtatttggattttcaaattttattatttaccgaagttgttattagattgagtcacgaccaggtcgctctctttaagacgt 11428074  T
Q  360 ttcgtggcactgcccaa 376  Q
    |||||||||||||||||    
T  11428075 ttcgtggcactgcccaa 11428091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 240 - 419
Target Start/End: Complemental strand, 29892455 - 29892265
Alignment:
Q  240 aaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattc-----------tattatctaccgaagttgttactaggttg 328  Q
    ||||||||||||||| ||| |||| |||||  ||| ||||||||||||||||| ||||||            | |||||| |||||||||||||||||||    
T  29892455 aaacgtcttaaaattattggttttggatttataaactgttgtatttggatttctaaattcagttttttaaagaatatctatcgaagttgttactaggttg 29892356  T
Q  329 agtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||  ||||||||||||||||||| |||| |||||||||||||| |||||| |||||| ||||||| |||| || ||||||| ||||    
T  29892355 agtcacggtcaggtcgctctctttaagaagtttggtggcactgcccaaaattgtgcaagacaaactatcaaccacacctcctccaggataa 29892265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 303 - 419
Target Start/End: Complemental strand, 20748404 - 20748288
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    |||||| | |||||||||||||||||||||||||||||||||| |||||||| | ||||| ||| |||| |||| |||||| ||| | |||||||| |||    
T  20748404 tatctatcaaagttgttactaggttgagtcacgaccaggtcgccctctttaacatgtttcatggtactgtccaaaattgtgcaaggccgactatcaacca 20748305  T
Q  403 cgccgcctccagaataa 419  Q
    |||||||||||||||||    
T  20748304 cgccgcctccagaataa 20748288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 303 - 419
Target Start/End: Complemental strand, 11614212 - 11614096
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    |||||| |||||||||||||||||||||||||||  |||| | ||||||||| ||||||  ||||||||| ||| |||||| ||| |||||||||| |||    
T  11614212 tatctatcgaagttgttactaggttgagtcacgatgaggttgttctctttaaaacgttttatggcactgctcaaaattgtgcaaggcagactatcaacca 11614113  T
Q  403 cgccgcctccagaataa 419  Q
    |||||||||||| ||||    
T  11614112 cgccgcctccaggataa 11614096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 307 - 410
Target Start/End: Complemental strand, 12406469 - 12406366
Alignment:
Q  307 taccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgcc 406  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||| ||  ||||| |||  |||||||||  ||||||    
T  12406469 taccgaagttgttactagattgagtcacgaccaggtcgctctcttaaagacgtttcgtggcagtgcctaaagttgtgcaaggaagactatcaatcacgcc 12406370  T
Q  407 gcct 410  Q
    ||||    
T  12406369 gcct 12406366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 304 - 419
Target Start/End: Complemental strand, 24589283 - 24589168
Alignment:
Q  304 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccac 403  Q
    ||||| |||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||| ||||  |||| |||||| |||| ||||||||| ||||    
T  24589283 atctatcgaagttgttactaagttgagtcacgatcagatcgctctctttaaaacgtttcgtgacactttccaaaattgtgcaagatagactatcaaccac 24589184  T
Q  404 gccgcctccagaataa 419  Q
    |||| |||||| ||||    
T  24589183 gccgtctccaggataa 24589168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 413
Target Start/End: Original strand, 14508931 - 14509069
Alignment:
Q  275 atgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgccc 374  Q
    ||||||| ||| ||||| |||||||||||||||||| ||||||||| |||| ||| | | || || ||||||||||| ||||||||||||| |||||  |    
T  14508931 atgttgtctttagattttcaaattctattatctaccaaagttgttattaggatgatttatgatcatgtcgctctcttcaagacgtttcgtgtcactgttc 14509030  T
Q  375 aagattgtggaagacagactatcanccacgccgcctcca 413  Q
    || |||||| |||||||| ||||| ||||||||| ||||    
T  14509031 aaaattgtgcaagacagattatcaaccacgccgcttcca 14509069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 307 - 419
Target Start/End: Complemental strand, 13736794 - 13736682
Alignment:
Q  307 taccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgcc 406  Q
    |||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||| || |||||| |||  |||||| || |||| |     
T  13736794 taccgaagttgttactaggttgagtcgccaccaggtccctctctttacgacgtttcgtggcactgcctaaaattgtgcaaggaagactaccaaccacact 13736695  T
Q  407 gcctccagaataa 419  Q
    |||||||| ||||    
T  13736694 gcctccaggataa 13736682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 17964696 - 17964634
Alignment:
Q  257 tgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgtt 319  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17964696 tgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgtt 17964634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 323 - 419
Target Start/End: Complemental strand, 12183100 - 12183004
Alignment:
Q  323 aggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||   |||||| || || || ||||||||||||||    
T  12183100 aggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagtttgtgcaatgtagactaacaaccgcgtcgcctccagaataa 12183004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 324 - 413
Target Start/End: Original strand, 19478145 - 19478233
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctcca 413  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| || |||||||| |||||    
T  19478145 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctcca 19478233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 263
Target Start/End: Complemental strand, 15992054 - 15991901
Alignment:
Q  110 tgttgttgtttacaacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaata 209  Q
    |||||||||||  |||  ||||||| |||||||||||||| |||||| |||||| |  |||||||||| | | || |||||||| ||   || ||||||     
T  15992054 tgttgttgtttgaaactggcacttcattgtttcagtcgaaagatgtatttctataatatgatttatccctgtcgtctttagggacaacaaaacctcaatg 15991955  T
Q  210 agtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgttttt 263  Q
    ||||  ||||||||||||||| ||| | |||||| |||||||||||||||||||    
T  15991954 agtagtttcttcggtagacatgacagaaagaaacctcttaaaattgttgttttt 15991901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 263
Target Start/End: Complemental strand, 15999716 - 15999563
Alignment:
Q  110 tgttgttgtttacaacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataattgaagctcaata 209  Q
    |||||||||||  |||  ||||||| |||||||||||||| |||||| |||||| |  |||||||||| | | || |||||||| ||   || ||||||     
T  15999716 tgttgttgtttgaaactggcacttcattgtttcagtcgaaagatgtatttctataatatgatttatccctgtcgtctttagggacaacaaaacctcaatg 15999617  T
Q  210 agtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgttttt 263  Q
    ||||  ||||||||||||||| ||| | |||||| |||||||||||||||||||    
T  15999616 agtagtttcttcggtagacatgacagaaagaaacctcttaaaattgttgttttt 15999563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 348 - 419
Target Start/End: Complemental strand, 16836231 - 16836160
Alignment:
Q  348 tctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||||||||||| |||||  ||| |||||||||| ||||||||||||||| ||||    
T  16836231 tctttaagacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgccgcctccaggataa 16836160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 3901909 - 3902004
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||  ||||| ||||| |||  ||| || || || |||||||||||| ||||    
T  3901909 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactatccaagtttgtgcaaggtagaataccaaccgcgccgcctccaggataa 3902004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 419
Target Start/End: Complemental strand, 13605190 - 13605096
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||| |||| |||||||||||||||||||| |||||| |||||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  13605190 ggttgagtcacgactaggttgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 13605096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 419
Target Start/End: Complemental strand, 17964634 - 17964563
Alignment:
Q  348 tctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||||  |||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  17964634 tctttaagacgtttcgtggcactatccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 17964563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 404
Target Start/End: Original strand, 35129640 - 35129704
Alignment:
Q  339 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| ||| |||||||||| |||||    
T  35129640 aggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaag-cagactatcaaccacg 35129704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 34142080 - 34142171
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||||||| || |||||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  34142080 tgagtcacgaccaggtcgctttctttaagacgtttcgtggctctacccaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 34142171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 34154696 - 34154787
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||||||| || |||||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  34154696 tgagtcacgaccaggtcgctttctttaagacgtttcgtggctctacccaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 34154787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 414
Target Start/End: Original strand, 21401755 - 21401841
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccag 414  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| |||||||||  |||||| || || ||||| ||||||    
T  21401755 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtggaaggtagactagcaaccgcgccgtctccag 21401841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 413
Target Start/End: Complemental strand, 5601072 - 5600982
Alignment:
Q  323 aggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctcca 413  Q
    |||||||||||||||||||||||| |||||||||||||||| | |||| ||| || ||||| |||  ||| || || || |||||||||||    
T  5601072 aggttgagtcacgaccaggtcgctttctttaagacgtttcgcgacactacccgagtttgtgtaaggtagaataacaaccgcgccgcctcca 5600982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 22698338 - 22698295
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  22698338 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 22698295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 368
Target Start/End: Complemental strand, 2760355 - 2760297
Alignment:
Q  310 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggca 368  Q
    |||||||||||||||||| ||| |||||||||||| ||||||||| |||||| ||||||    
T  2760355 cgaagttgttactaggttaagttacgaccaggtcgttctctttaaaacgttttgtggca 2760297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 2882867 - 2882821
Alignment:
Q  311 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 357  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||    
T  2882867 gaagttgttactaggttgagtcacgaccatatcgctctctttaagac 2882821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 357
Target Start/End: Complemental strand, 2863571 - 2863518
Alignment:
Q  304 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 357  Q
    |||||| |||||||||||||||||||||||| | || |||||||||||||||||    
T  2863571 atctactgaagttgttactaggttgagtcactatcatgtcgctctctttaagac 2863518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 412
Target Start/End: Original strand, 10642706 - 10642794
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctcc 412  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||  || || ||||| |||  |||||| || || ||||||||||    
T  10642706 ggttgagtcacgacaatgtcgctttctttaagacgtttcgtggcactatccgaggttgtgcaaggtagactaacaaccgcgccgcctcc 10642794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 419
Target Start/End: Original strand, 22609556 - 22609659
Alignment:
Q  310 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaga-ttgtggaagacagactatcanccacgccgc 408  Q
    ||||||||||| |||||| ||||||||||||       ||||||||||||||||||| |||||| || | |||||||||| | |||||||  ||||||||    
T  22609556 cgaagttgttattaggttaagtcacgaccag-------tctttaagacgtttcgtggtactgcctaaaaattgtggaagataaactatcagtcacgccgc 22609648  T
Q  409 ctccagaataa 419  Q
    |||||| ||||    
T  22609649 ctccaggataa 22609659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 31981560 - 31981651
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || || |||||| |||  |||||| || || ||||| |||||| ||||    
T  31981560 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 31981651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 376
Target Start/End: Complemental strand, 9751928 - 9751857
Alignment:
Q  304 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaa 376  Q
    ||||||| ||||||| |||||||||||||||||  | ||||||||||||||||| ||| |||||||| |||||    
T  9751928 atctaccaaagttgtcactaggttgagtcacgaata-gtcgctctctttaagacattttgtggcactacccaa 9751857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 413
Target Start/End: Complemental strand, 22695380 - 22695281
Alignment:
Q  314 gttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctcca 413  Q
    ||||||||||||||||| |||||  | || ||||||||||| |||||||||| || ||| ||| |||||| |||||| || ||||  ||| |||||||||    
T  22695380 gttgttactaggttgagacacgattatgttgctctctttaacacgtttcgtgacattgctcaaaattgtgcaagacatacaatcaatcacaccgcctcca 22695281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 21396699 - 21396742
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  21396699 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 21396742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 24191478 - 24191435
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  24191478 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 24191435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 24192575 - 24192532
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  24192575 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 24192532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 362
Target Start/End: Complemental strand, 11956800 - 11956762
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttc 362  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  11956800 ggttgagtcatgaccaggtcgctctctttaagacgtttc 11956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 404
Target Start/End: Complemental strand, 32815138 - 32815082
Alignment:
Q  347 ctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    ||||||||||||||||| |||||||||||| |||||| ||| |||||||||| |||||    
T  32815138 ctctttaagacgtttcgcggcactgcccaaaattgtgcaag-cagactatcaaccacg 32815082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 29491332 - 29491241
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||| |||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  29491332 tgagtcacgaccaagtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 29491241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 15991881 - 15991829
Alignment:
Q  251 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt 303  Q
    |||||||| |||| || ||||||| ||||||||||| ||||||||||||||||    
T  15991881 aattgttggttttggaattccaaattgttgtatttgaatttccaaattctatt 15991829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 15999543 - 15999491
Alignment:
Q  251 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt 303  Q
    |||||||| |||| || ||||||| ||||||||||| ||||||||||||||||    
T  15999543 aattgttggttttggaattccaaattgttgtatttgaatttccaaattctatt 15999491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 303
Target Start/End: Original strand, 22609470 - 22609530
Alignment:
Q  243 cgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt 303  Q
    |||||| || |||||| |||| ||||||| || | ||||||||||||||||||||||||||    
T  22609470 cgtcttgaatttgttggttttggatttccgaactattgtatttggatttccaaattctatt 22609530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 34375919 - 34375962
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||    
T  34375919 tgagtcacgatcaggtcgctttctttaagacgtttcgcggcact 34375962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 17281662 - 17281616
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||| || |||||| |||||||||||||||| ||||||    
T  17281662 ggttgagtcacgagcatgtcgctttctttaagacgtttcgcggcact 17281616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 6728430 - 6728397
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtt 360  Q
    |||||||||||||||||||| |||||||||||||    
T  6728430 tgagtcacgaccaggtcgctttctttaagacgtt 6728397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 13736855 - 13736814
Alignment:
Q  259 tttttagatttccaaaatgttgtatttggatttccaaattct 300  Q
    ||||| |||||||||||  |||||||||||||||||||||||    
T  13736855 tttttggatttccaaaactttgtatttggatttccaaattct 13736814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 19995472 - 19995439
Alignment:
Q  302 ttatctaccgaagttgttactaggttgagtcacg 335  Q
    ||||||||| ||||||||||||||||||||||||    
T  19995472 ttatctaccaaagttgttactaggttgagtcacg 19995439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 383
Target Start/End: Original strand, 14041703 - 14041747
Alignment:
Q  339 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtg 383  Q
    |||||||||||||||| |||||||||| ||||||| || ||||||    
T  14041703 aggtcgctctctttaaaacgtttcgtgacactgcctaaaattgtg 14041747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 166256 - 166090
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 352  Q
    |||||||||| |||||||||| |||||||||| || |||||||||||| || ||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  166256 tgttgtttttggatttccaaactgttgtattttggttttccaaattctgttttctaccgaaattgatactaggttgagtcacaaccaggtcgctctcttt 166157  T
Q  353 aagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||||||||||||||| || |||||| |||||| ||||||| ||||||||||||||| ||||    
T  166156 aagacgtttcgtggcactgccaaaaattgtgcaagacatactatcaaccacgccgcctccaggataa 166090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 252 - 419
Target Start/End: Original strand, 35558 - 35725
Alignment:
Q  252 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 351  Q
    |||||| |||||  |||| |||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||| | |||||||||    
T  35558 attgttatttttgcattttcaaactgttgtatttggatttccaaattctattatttactgaagttgttactaggttaagttacgaccatgccgctctctt 35657  T
Q  352 taagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||| ||||| |||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  35658 taagacgtttcgtgacactggccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 35725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 252 - 419
Target Start/End: Original strand, 25323 - 25490
Alignment:
Q  252 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 351  Q
    |||||||| ||| ||||| |||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |  ||||| |||||||    
T  25323 attgttgtctttggattttcaaactgctgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacaattaggtcactctctt 25422  T
Q  352 taagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    ||||||||| |||| ||||||  || |||||| |||||||||||||| ||||||||| ||||| ||||    
T  25423 taagacgttacgtgacactgcgtaaaattgtgcaagacagactatcaaccacgccgcgtccaggataa 25490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 419
Target Start/End: Original strand, 3750 - 4082
Alignment:
Q  104 ttttagtgttgttgttta----caacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataattg 199  Q
    ||||||||||||||||||    |||||||||||| ||  ||||||    || |||||||| |||   ||| ||||||||| ||||||||||||| ||  |    
T  3750 ttttagtgttgttgtttaaaaacaacaagcactttgtcatttcagctagagcatgtaattttatagtttggtttatccttgttgtatttagggacaacag 3849  T
Q  200 aagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattc 299  Q
    ||||| ||||||||| ||||||| |||||||| ||    ||||| | ||||||||||||||||| |||||  ||| ||| ||||||| |||| |||||||    
T  3850 aagcttaataagtaatttcttcgatagacatagcagtaggaaacattttaaaattgttgtttttggattttaaaattgtcgtatttgaattttcaaattc 3949  T
Q  300 tatt-------------atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaa 386  Q
    ||||             ||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| |||| ||  || || ||    
T  3950 tatttttgaaaaagaatatctaccgaagttgttactaggttgagtcacgaccatatcgctctctttaagactttttatggcaatgccaaaatttttgcaa 4049  T
Q  387 gacagactatcanccacgccgcctccagaataa 419  Q
    |||| || |||| ||||||||||||||| ||||    
T  4050 gacataccatcaaccacgccgcctccaggataa 4082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 419
Target Start/End: Original strand, 255792 - 255908
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcancca 402  Q
    |||||||| || ||||||||| ||| || |||||||||||| |||||||||||| ||||||||||||| ||||| |||||| |||||| ||||||| | |    
T  255792 tatctaccaaatttgttactatgttaagacacgaccaggtcactctctttaagaggtttcgtggcactacccaaaattgtgcaagacatactatcaacta 255891  T
Q  403 cgccgcctccagaataa 419  Q
     ||||||||||| ||||    
T  255892 tgccgcctccaggataa 255908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 303 - 398
Target Start/End: Original strand, 15259 - 15354
Alignment:
Q  303 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatca 398  Q
    |||||||||||||||||||||||||||||||||||||  || |||  ||||||| ||||||| ||||||| ||| |||||| ||||||||||||||    
T  15259 tatctaccgaagttgttactaggttgagtcacgaccatatcactccttttaagatgtttcgtagcactgctcaaaattgtgcaagacagactatca 15354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 419
Target Start/End: Original strand, 283 - 462
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt-----------atctaccgaagttgt---tactaggttgagtcacgacca 339  Q
    |||||||||| |||||||||| |||||||||| |||||| ||||||| ||           |||||||||||||||   ||||||||||||||||||| |    
T  283 tgttgtttttggatttccaaactgttgtatttagatttcgaaattctttttgaaaaagaatatctaccgaagttgtaattactaggttgagtcacgacta 382  T
Q  340 ggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
     |||||| | ||||||||||||| ||||| || ||||  ||||| |||||| ||||||| ||||| ||||||||| ||||    
T  383 tgtcgctttttttaagacgtttcatggcattgtccaaagttgtgcaagacacactatcaaccacgtcgcctccaggataa 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 419
Target Start/End: Complemental strand, 165212 - 165033
Alignment:
Q  254 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt-----------atctaccgaagttgt---tactaggttgagtcacgacca 339  Q
    |||||||||| |||||||||| |||||||||| |||||| ||||||| ||           |||||||||||||||   ||||||||||||||||||| |    
T  165212 tgttgtttttggatttccaaactgttgtatttagatttcgaaattctttttgaaaaagaatatctaccgaagttgtaattactaggttgagtcacgacta 165113  T
Q  340 ggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
     |||||| | ||||||||||||| ||||| || ||||  ||||| |||||| ||||||| ||||| ||||||||| ||||    
T  165112 tgtcgctttttttaagacgtttcatggcattgtccaaagttgtgcaagacacactatcaaccacgtcgcctccaggataa 165033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 419
Target Start/End: Complemental strand, 2870 - 2776
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| |||||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  2870 ggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 2776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 419
Target Start/End: Complemental strand, 10830 - 10736
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| |||||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  10830 ggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 10736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 49; Significance: 7e-19; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 1562 - 1656
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  1562 ggttaagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 1656  T

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Target: scaffold0011; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 419
Target Start/End: Original strand, 7043 - 7137
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||| |||||| ||||| |||  |||||| || |||||||| |||||| ||||    
T  7043 ggttgagttacgaccaggtcgttctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 7137  T

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Target: scaffold0011; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 376
Target Start/End: Complemental strand, 155587 - 155542
Alignment:
Q  331 tcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaa 376  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||    
T  155587 tcacgaccaggtcgttctctttaagacgtttcgtggggctgcccaa 155542  T

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Target: scaffold0018 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 404
Target Start/End: Complemental strand, 171820 - 171734
Alignment:
Q  318 ttactaggttgagtcac-gaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacg 404  Q
    |||||||| |||||| | ||| ||||||||||||||||||||||||||||||||||| || |||||| ||| |||||||||| |||||    
T  171820 ttactaggctgagtcgcagactaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaag-cagactatcaaccacg 171734  T

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Target: scaffold0067 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 34067 - 34021
Alignment:
Q  324 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  34067 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 34021  T

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Target: scaffold0055 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 3058 - 3101
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  3058 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 3101  T

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Target: scaffold0052 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 81477 - 81434
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  81477 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 81434  T

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Target: scaffold0184 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 411
Target Start/End: Original strand, 2291 - 2391
Alignment:
Q  310 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcc 409  Q
    ||||||||||| |||||||||||| || ||||||| ||||||||| |||||| ||| || ||   || |||||| |||||||| ||||| ||||||||||    
T  2291 cgaagttgttattaggttgagtcatgatcaggtcgttctctttaatacgttttgtgccattgtttaaaattgtgcaagacaga-tatcaaccacgccgcc 2389  T
Q  410 tc 411  Q
    ||    
T  2390 tc 2391  T

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Target: scaffold0060 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 37001 - 37101
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaat 417  Q
    ||||| || |||||||||||||||||||| |||||||||||||||| |||||| || || |||||| |||  |||||| || || ||||| |||||| ||    
T  37001 ttactggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggat 37099  T
Q  418 aa 419  Q
    ||    
T  37100 aa 37101  T

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Target: scaffold0060; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 48141 - 48081
Alignment:
Q  171 tttatccttcttgtatttagggataattgaagctcaataagtaacttcttcggtagacata 231  Q
    |||||||||| |||||||||||| ||   || |||||||||||| |||||||||| |||||    
T  48141 tttatccttcgtgtatttagggacaacgaaatctcaataagtaatttcttcggtaaacata 48081  T

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Target: scaffold0594 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 9303 - 9212
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  9303 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggaagactagcaaccgcgccgtctccaggataa 9212  T

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Target: scaffold0166 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 13835 - 13744
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  13835 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 13744  T

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Target: scaffold0166; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 19302 - 19250
Alignment:
Q  318 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    ||||| || ||||||||||||| |||||| |||||||||||||||| ||||||    
T  19302 ttactggggtgagtcacgaccatgtcgctttctttaagacgtttcgcggcact 19250  T

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Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Original strand, 31545 - 31636
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcanccacgccgcctccagaataa 419  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| || || ||||| |||||| ||||    
T  31545 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 31636  T

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Target: scaffold0517 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 3563 - 3606
Alignment:
Q  327 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 370  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  3563 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 3606  T

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Target: scaffold0330 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 231
Target Start/End: Original strand, 19732 - 19863
Alignment:
Q  104 ttttagtgttgttgttta----caacaagcacttcgttgtttcagtcgaaggatgtaattctatgacttgatttatccttcttgtatttagggataattg 199  Q
    ||||||||||||||||||    |||||||||||| ||  ||||||    || |||||||| |||   ||| ||||||||| ||||||||||||| ||  |    
T  19732 ttttagtgttgttgtttaaaaacaacaagcactttgtcatttcagctagagcatgtaattttatagtttggtttatccttgttgtatttagggacaacag 19831  T
Q  200 aagctcaataagtaacttcttcggtagacata 231  Q
    ||||| ||||||||| ||||||| ||||||||    
T  19832 aagcttaataagtaatttcttcgatagacata 19863  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 357
Target Start/End: Complemental strand, 1329 - 1291
Alignment:
Q  319 tactaggttgagtcacgaccaggtcgctctctttaagac 357  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  1329 tactgggttgagtcacgaccaggtcgctttctttaagac 1291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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