View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0844-INSERTION-9 (Length: 429)

Name: NF0844-INSERTION-9
Description: NF0844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0844-INSERTION-9
NF0844-INSERTION-9
[»] chr8 (31 HSPs)
chr8 (1-41)||(44893402-44893442)
chr8 (1-41)||(8141048-8141088)
chr8 (1-41)||(22810026-22810066)
chr8 (1-37)||(24938690-24938726)
chr8 (1-41)||(34846760-34846800)
chr8 (2-41)||(2467242-2467281)
chr8 (2-41)||(10535527-10535566)
chr8 (2-41)||(17845680-17845719)
chr8 (2-41)||(24837189-24837228)
chr8 (1-40)||(29933719-29933758)
chr8 (2-41)||(38922538-38922577)
chr8 (1-39)||(6100418-6100456)
chr8 (1-35)||(18091347-18091381)
chr8 (1-39)||(33401925-33401963)
chr8 (1-39)||(33935861-33935899)
chr8 (1-41)||(583760-583800)
chr8 (1-41)||(13085470-13085510)
chr8 (1-41)||(14666195-14666235)
chr8 (1-41)||(34613902-34613942)
chr8 (2-41)||(3418637-3418676)
chr8 (2-41)||(6940505-6940544)
chr8 (2-41)||(9860120-9860159)
chr8 (1-40)||(14846522-14846561)
chr8 (2-41)||(15884679-15884718)
chr8 (6-41)||(17981392-17981427)
chr8 (1-36)||(43027251-43027286)
chr8 (1-35)||(1013107-1013141)
chr8 (7-41)||(43032853-43032887)
chr8 (5-41)||(68222-68258)
chr8 (1-41)||(7673778-7673817)
chr8 (2-34)||(26570871-26570903)
[»] chr5 (32 HSPs)
chr5 (1-41)||(1538374-1538414)
chr5 (1-41)||(18136404-18136444)
chr5 (2-41)||(23383592-23383631)
chr5 (2-41)||(41163583-41163622)
chr5 (1-41)||(6767175-6767215)
chr5 (1-41)||(28856920-28856960)
chr5 (1-41)||(35403636-35403676)
chr5 (2-41)||(5732044-5732083)
chr5 (2-41)||(9812816-9812855)
chr5 (2-41)||(12704958-12704997)
chr5 (2-41)||(19572668-19572707)
chr5 (2-41)||(28857072-28857111)
chr5 (2-41)||(30349523-30349562)
chr5 (2-41)||(39728331-39728370)
chr5 (2-40)||(38297089-38297127)
chr5 (2-39)||(20525782-20525819)
chr5 (1-41)||(25417307-25417346)
chr5 (1-41)||(26077084-26077124)
chr5 (1-41)||(31890031-31890071)
chr5 (1-41)||(42086270-42086310)
chr5 (2-41)||(7866525-7866564)
chr5 (2-41)||(12766075-12766114)
chr5 (2-41)||(14728026-14728065)
chr5 (1-40)||(37263184-37263223)
chr5 (2-41)||(42861342-42861381)
chr5 (6-40)||(25950707-25950741)
chr5 (1-41)||(4016379-4016419)
chr5 (9-41)||(14152001-14152033)
chr5 (5-41)||(18327717-18327753)
chr5 (1-41)||(25510430-25510470)
chr5 (1-41)||(35561942-35561982)
chr5 (9-41)||(42292147-42292179)
[»] chr3 (36 HSPs)
chr3 (1-41)||(10855326-10855366)
chr3 (1-41)||(13893868-13893908)
chr3 (1-41)||(48341962-48342002)
chr3 (2-41)||(54261169-54261208)
chr3 (2-39)||(46529997-46530034)
chr3 (1-41)||(11687234-11687274)
chr3 (1-41)||(25294902-25294942)
chr3 (1-41)||(26207926-26207966)
chr3 (1-41)||(29127861-29127901)
chr3 (1-41)||(35315898-35315938)
chr3 (1-41)||(41630637-41630677)
chr3 (1-41)||(45877396-45877436)
chr3 (1-41)||(51683079-51683119)
chr3 (1-40)||(10040499-10040538)
chr3 (2-41)||(15320129-15320168)
chr3 (2-41)||(29762280-29762319)
chr3 (2-41)||(32873673-32873712)
chr3 (1-38)||(22405671-22405708)
chr3 (2-41)||(33251605-33251644)
chr3 (2-41)||(37092630-37092669)
chr3 (2-41)||(39849015-39849054)
chr3 (2-41)||(42412899-42412938)
chr3 (5-39)||(31072824-31072858)
chr3 (7-41)||(33560808-33560842)
chr3 (2-39)||(7650170-7650207)
chr3 (1-30)||(35998699-35998728)
chr3 (7-40)||(49082772-49082805)
chr3 (5-41)||(6462358-6462394)
chr3 (1-41)||(7310828-7310868)
chr3 (175-211)||(15334454-15334490)
chr3 (1-41)||(30735070-30735110)
chr3 (1-41)||(30767372-30767412)
chr3 (2-38)||(34374545-34374581)
chr3 (1-41)||(40944825-40944865)
chr3 (1-33)||(49198293-49198325)
chr3 (1-41)||(51060406-51060446)
[»] chr2 (33 HSPs)
chr2 (1-41)||(21180438-21180478)
chr2 (1-41)||(38005344-38005384)
chr2 (1-41)||(7747216-7747256)
chr2 (1-41)||(8410073-8410113)
chr2 (1-41)||(20612660-20612700)
chr2 (1-41)||(23500805-23500845)
chr2 (2-41)||(12864167-12864206)
chr2 (2-41)||(18902654-18902693)
chr2 (1-39)||(2550810-2550848)
chr2 (1-39)||(14853493-14853531)
chr2 (1-35)||(34356148-34356182)
chr2 (5-39)||(45263793-45263827)
chr2 (2-39)||(29422158-29422195)
chr2 (1-41)||(10026740-10026780)
chr2 (1-41)||(10046600-10046640)
chr2 (1-41)||(18649150-18649190)
chr2 (5-41)||(21286390-21286426)
chr2 (1-41)||(22593077-22593117)
chr2 (1-41)||(42770775-42770815)
chr2 (1-41)||(44945536-44945576)
chr2 (1-32)||(2149328-2149359)
chr2 (2-41)||(2528465-2528504)
chr2 (6-41)||(20963233-20963268)
chr2 (2-41)||(29697467-29697506)
chr2 (2-41)||(41032029-41032068)
chr2 (2-40)||(5035231-5035269)
chr2 (12-41)||(25549681-25549710)
chr2 (1-41)||(331443-331483)
chr2 (1-33)||(14169741-14169773)
chr2 (1-41)||(19976931-19976971)
chr2 (1-41)||(24179513-24179553)
chr2 (9-41)||(34722631-34722663)
chr2 (5-41)||(37560119-37560155)
[»] chr1 (35 HSPs)
chr1 (1-41)||(5855465-5855505)
chr1 (2-41)||(33418240-33418279)
chr1 (3-40)||(41663982-41664019)
chr1 (1-41)||(10422731-10422771)
chr1 (1-41)||(32151047-32151087)
chr1 (1-41)||(48798195-48798235)
chr1 (2-41)||(5503975-5504014)
chr1 (2-41)||(11398013-11398052)
chr1 (2-41)||(17642129-17642168)
chr1 (2-40)||(49078058-49078096)
chr1 (2-39)||(42267688-42267725)
chr1 (1-41)||(2981056-2981096)
chr1 (1-41)||(8905275-8905315)
chr1 (5-41)||(10173096-10173132)
chr1 (1-41)||(18915810-18915850)
chr1 (6-41)||(32819-32854)
chr1 (2-41)||(8763935-8763974)
chr1 (2-41)||(9853402-9853440)
chr1 (2-41)||(12036869-12036908)
chr1 (2-41)||(15238231-15238270)
chr1 (2-41)||(25165346-25165385)
chr1 (2-41)||(31152660-31152699)
chr1 (2-41)||(34877934-34877973)
chr1 (2-41)||(41743217-41743256)
chr1 (1-39)||(892424-892462)
chr1 (2-36)||(31576677-31576711)
chr1 (2-40)||(50371960-50371998)
chr1 (2-39)||(26325756-26325793)
chr1 (1-41)||(30927852-30927893)
chr1 (1-41)||(1764314-1764354)
chr1 (5-41)||(2567223-2567259)
chr1 (1-41)||(10336459-10336499)
chr1 (1-41)||(21429723-21429763)
chr1 (1-41)||(40288602-40288642)
chr1 (5-41)||(47313023-47313059)
[»] scaffold0029 (1 HSPs)
scaffold0029 (2-41)||(40990-41029)
[»] scaffold0016 (1 HSPs)
scaffold0016 (2-41)||(8834-8873)
[»] chr7 (31 HSPs)
chr7 (2-41)||(5039542-5039581)
chr7 (4-41)||(34659174-34659211)
chr7 (1-41)||(27875211-27875251)
chr7 (1-41)||(48804628-48804668)
chr7 (2-41)||(4228875-4228914)
chr7 (2-41)||(19914826-19914865)
chr7 (2-41)||(22268153-22268192)
chr7 (2-41)||(43346903-43346942)
chr7 (2-41)||(43925458-43925497)
chr7 (6-40)||(23658130-23658164)
chr7 (8-41)||(9685691-9685724)
chr7 (5-41)||(1797409-1797445)
chr7 (2-38)||(4195329-4195365)
chr7 (1-41)||(8734810-8734850)
chr7 (1-41)||(14650262-14650302)
chr7 (1-41)||(26423411-26423451)
chr7 (1-41)||(47341821-47341861)
chr7 (5-40)||(5069940-5069975)
chr7 (2-41)||(21530694-21530733)
chr7 (2-41)||(22993491-22993530)
chr7 (5-35)||(24969454-24969484)
chr7 (1-39)||(39420783-39420821)
chr7 (1-39)||(46414620-46414658)
chr7 (2-39)||(13095804-13095841)
chr7 (1-41)||(4973234-4973274)
chr7 (1-41)||(10048000-10048040)
chr7 (5-41)||(11607080-11607116)
chr7 (1-41)||(17748506-17748546)
chr7 (1-41)||(18785614-18785654)
chr7 (1-41)||(45447915-45447955)
chr7 (1-41)||(45960126-45960166)
[»] chr6 (22 HSPs)
chr6 (2-41)||(14107482-14107521)
chr6 (2-41)||(19230681-19230720)
chr6 (1-41)||(3030742-3030782)
chr6 (1-41)||(8938657-8938697)
chr6 (1-41)||(21016875-21016915)
chr6 (1-41)||(21898594-21898634)
chr6 (2-41)||(2271425-2271464)
chr6 (2-41)||(8612098-8612137)
chr6 (2-41)||(9179860-9179899)
chr6 (2-39)||(24671992-24672029)
chr6 (5-41)||(13036128-13036164)
chr6 (1-41)||(29333262-29333302)
chr6 (2-41)||(5253347-5253386)
chr6 (2-41)||(5759575-5759614)
chr6 (2-41)||(15643952-15643991)
chr6 (1-41)||(8932607-8932647)
chr6 (1-41)||(8944073-8944113)
chr6 (5-41)||(9147251-9147287)
chr6 (1-41)||(13468879-13468919)
chr6 (1-41)||(17115021-17115061)
chr6 (1-41)||(29444889-29444929)
chr6 (1-41)||(32048397-32048437)
[»] chr4 (38 HSPs)
chr4 (1-41)||(1446773-1446813)
chr4 (1-41)||(19651569-19651609)
chr4 (1-41)||(24166397-24166437)
chr4 (1-41)||(26480073-26480113)
chr4 (1-41)||(29895734-29895774)
chr4 (1-41)||(41339519-41339559)
chr4 (1-41)||(52950029-52950069)
chr4 (1-41)||(53599007-53599047)
chr4 (2-41)||(1940898-1940937)
chr4 (2-41)||(2559255-2559294)
chr4 (2-41)||(3574570-3574609)
chr4 (2-41)||(6779159-6779198)
chr4 (2-41)||(34667726-34667765)
chr4 (2-41)||(38165975-38166014)
chr4 (2-41)||(55920982-55921021)
chr4 (8-41)||(13552068-13552101)
chr4 (5-41)||(6032764-6032800)
chr4 (1-41)||(7000471-7000511)
chr4 (1-41)||(27248375-27248415)
chr4 (1-41)||(38075380-38075420)
chr4 (1-41)||(41163006-41163046)
chr4 (1-40)||(8888969-8889008)
chr4 (2-41)||(13073486-13073525)
chr4 (2-41)||(14123964-14124003)
chr4 (2-41)||(14567199-14567238)
chr4 (2-41)||(27531781-27531820)
chr4 (2-41)||(47078406-47078445)
chr4 (6-36)||(5472977-5473007)
chr4 (2-40)||(12703670-12703708)
chr4 (1-35)||(15829646-15829680)
chr4 (6-40)||(37382497-37382531)
chr4 (2-39)||(4736545-4736582)
chr4 (2-39)||(33647669-33647706)
chr4 (2-39)||(45789645-45789682)
chr4 (1-29)||(12887339-12887367)
chr4 (2-30)||(15732583-15732611)
chr4 (5-41)||(29588687-29588723)
chr4 (1-41)||(43458560-43458600)
[»] scaffold0006 (1 HSPs)
scaffold0006 (2-41)||(68463-68502)
[»] scaffold0209 (1 HSPs)
scaffold0209 (1-41)||(12520-12560)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-41)||(25908-25948)
[»] scaffold0005 (1 HSPs)
scaffold0005 (2-41)||(250137-250176)
[»] scaffold0002 (1 HSPs)
scaffold0002 (2-41)||(516-555)
[»] scaffold0332 (1 HSPs)
scaffold0332 (5-39)||(15280-15314)


Alignment Details
Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44893442 - 44893402
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44893442 taaccaagttgtttgggctccagtggcaaggagctccttcc 44893402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8141048 - 8141088
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  8141048 taaccaagttgtttgggctccagtggcaaggagctgcttcc 8141088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22810026 - 22810066
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  22810026 taaccaagttgtttgggctctagtggcaaggagctccttcc 22810066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 24938726 - 24938690
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctcc 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  24938726 taaccaagttgtttgggctccagtggcaaggagctcc 24938690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34846760 - 34846800
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  34846760 taaccaagttgtttgggctccagtggcaaggagctcattcc 34846800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 2467281 - 2467242
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  2467281 aaccaagttgcttgggctccagtggcaaggagctccttcc 2467242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 10535566 - 10535527
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  10535566 aaccaagttgtttggactccagtggcaaggagctccttcc 10535527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 17845680 - 17845719
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  17845680 aaccaagttgtttgggctccagtggcaatgagctccttcc 17845719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 24837189 - 24837228
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  24837189 aaccaagttgcttgggctccagtggcaaggagctccttcc 24837228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29933719 - 29933758
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttc 40  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  29933719 taaccaagttgtttggactccagtggcaaggagctccttc 29933758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 38922577 - 38922538
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  38922577 aaccaagttgcttgggctccagtggcaaggagctccttcc 38922538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6100418 - 6100456
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  6100418 taaccaagttgtttgggcttcagtggcaaggagctcctt 6100456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 18091347 - 18091381
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagct 35  Q
    |||||||||||||||||||||||||||||||||||    
T  18091347 taaccaagttgtttgggctccagtggcaaggagct 18091381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 33401963 - 33401925
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  33401963 taactaagttgtttgggctccagtggcaaggagctcctt 33401925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 33935899 - 33935861
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  33935899 taaccaagttgtttgggctccagttgcaaggagctcctt 33935861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 583760 - 583800
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  583760 taaccaagttgtttgggctctagtggcaaggagctacttcc 583800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13085470 - 13085510
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  13085470 taaccaacttgtttgggctccagtggcgaggagctccttcc 13085510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14666235 - 14666195
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  14666235 taaccaagttgcttgggctccagtggcaaggagctcattcc 14666195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34613942 - 34613902
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||| ||||||||||||||||||||| |||||||||||    
T  34613942 taaccaaattgtttgggctccagtggcaatgagctccttcc 34613902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 3418676 - 3418637
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  3418676 aaccaagttgtttggactcccgtggcaaggagctccttcc 3418637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 6940505 - 6940544
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||| ||||||||| ||||    
T  6940505 aaccaagttgtttgggctccagtggtaaggagctcattcc 6940544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 9860159 - 9860120
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  9860159 aaccaagttgtttgggatccagtggcaaagagctccttcc 9860120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 14846522 - 14846561
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttc 40  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  14846522 taaccaagttgtttgggctccactggcaagaagctccttc 14846561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 15884718 - 15884679
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  15884718 aaccaagttgattgggctccagtggtaaggagctccttcc 15884679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 17981392 - 17981427
Alignment:
Q  6 aagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||| |||||||||||||||||||||||||||||    
T  17981392 aagttgcttgggctccagtggcaaggagctccttcc 17981427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 43027251 - 43027286
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctc 36  Q
    ||||||||||||||||||||||||||||| ||||||    
T  43027251 taaccaagttgtttgggctccagtggcaatgagctc 43027286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 1013141 - 1013107
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagct 35  Q
    ||||||||||| |||||||||||||||||||||||    
T  1013141 taaccaagttgcttgggctccagtggcaaggagct 1013107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 43032853 - 43032887
Alignment:
Q  7 agttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||| |||||||    
T  43032853 agttgtttgggctccagtggcaaggagttccttcc 43032887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 68258 - 68222
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  68258 caagttgtttgagctccggtggcaaggagctccttcc 68222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7673817 - 7673778
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  7673817 taaccaagttgcttgg-ctccagtggcaaggagctccttcc 7673778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 26570871 - 26570903
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagc 34  Q
    ||||||||||||||||||| |||||||||||||    
T  26570871 aaccaagttgtttgggctctagtggcaaggagc 26570903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1538374 - 1538414
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1538374 taaccaagttgtttgggctccagtggcaaggagctccttcc 1538414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18136444 - 18136404
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18136444 taaccaagttgtttgggctccagtggcaaggagctccttcc 18136404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 23383592 - 23383631
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23383592 aaccaagttgtttgggctccagtggcaaggagctccttcc 23383631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 41163622 - 41163583
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41163622 aaccaagttgtttgggctccagtggcaaggagctccttcc 41163583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6767215 - 6767175
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  6767215 taaccaagttgcttgggctccagtggcaaggagctccttcc 6767175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28856920 - 28856960
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  28856920 taaccaagttgcttgggctccagtggcaaggagctccttcc 28856960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35403676 - 35403636
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  35403676 taaccaacttgtttgggctccagtggcaaggagctccttcc 35403636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 5732083 - 5732044
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  5732083 aaccaagttgcttgggctccagtggcaaggagctccttcc 5732044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 9812816 - 9812855
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  9812816 aaccaagttgtttggactccagtggcaaggagctccttcc 9812855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 12704958 - 12704997
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  12704958 aaccaagttgtttggactccagtggcaaggagctccttcc 12704997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 19572668 - 19572707
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  19572668 aaccaagttgcttgggctccagtggcaaggagctccttcc 19572707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 28857072 - 28857111
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  28857072 aaccaagttgcttgggctccagtggcaaggagctccttcc 28857111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 30349523 - 30349562
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  30349523 aaccaagttgtttgggctccagtggcaaggagttccttcc 30349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 39728331 - 39728370
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  39728331 aaccaagttgtttgggctccagtggcaaggagctctttcc 39728370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 38297127 - 38297089
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttc 40  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  38297127 aaccaaattgtttgggctccagtggcaaggagctccttc 38297089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 20525782 - 20525819
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||||||||| |||||||||||||||||||||||||||    
T  20525782 aaccaagttgcttgggctccagtggcaaggagctcctt 20525819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25417346 - 25417307
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  25417346 taaccaagtt-tttgggctccagtggcaaggagctccttcc 25417307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26077084 - 26077124
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  26077084 taaccaagttgtttgggctccagtggtaaggagctcattcc 26077124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31890031 - 31890071
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  31890031 taaccaagttgtttgggctcccgtggcaaagagctccttcc 31890071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42086270 - 42086310
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  42086270 taaccaagttgcttgggctccggtggcaaggagctccttcc 42086310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 7866525 - 7866564
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  7866525 aaccaagttgcttggactccagtggcaaggagctccttcc 7866564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 12766075 - 12766114
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  12766075 aaccaagttgtttggactcgagtggcaaggagctccttcc 12766114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 14728026 - 14728065
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  14728026 aaccaagttgtttgggctccagtggcaatgagctcattcc 14728065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 37263184 - 37263223
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttc 40  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  37263184 taaccaagttgcttgggctccagtggcaaggagttccttc 37263223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 42861381 - 42861342
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  42861381 aaccaaattgtttgggctccagtggcaaggagctcattcc 42861342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 25950741 - 25950707
Alignment:
Q  6 aagttgtttgggctccagtggcaaggagctccttc 40  Q
    ||||||||||||||||||||| |||||||||||||    
T  25950741 aagttgtttgggctccagtggtaaggagctccttc 25950707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4016419 - 4016379
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||| ||||||||||||||||| ||||| ||||    
T  4016419 taaccaagttgtatgggctccagtggcaagaagctcattcc 4016379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 14152001 - 14152033
Alignment:
Q  9 ttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||| ||||||||||||||||||||||||||    
T  14152001 ttgtttcggctccagtggcaaggagctccttcc 14152033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 18327717 - 18327753
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  18327717 caagttttttggactccagtggcaaggagctccttcc 18327753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25510430 - 25510470
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||| |||| ||||||||| ||||||||    
T  25510430 taaccaagttgtttgggttccaatggcaaggaactccttcc 25510470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35561982 - 35561942
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||| |||||||||||| |||||||||||    
T  35561982 taaccaagttgcttggactccagtggcaaagagctccttcc 35561942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 42292179 - 42292147
Alignment:
Q  9 ttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||| ||||    
T  42292179 ttgtttgggctccagtggcaaggagctcattcc 42292147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10855326 - 10855366
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10855326 taaccaagttgtttgggctccagtggcaaggagctccttcc 10855366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13893868 - 13893908
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13893868 taaccaagttgtttgggctccagtggcaaggagctccttcc 13893908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48341962 - 48342002
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  48341962 taaccaagttgtttgggctccagtggcaaggagctccttcc 48342002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 54261169 - 54261208
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  54261169 aaccaagttgtttgggctccagtggcaaggagctccttcc 54261208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 46530034 - 46529997
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46530034 aaccaagttgtttgggctccagtggcaaggagctcctt 46529997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11687274 - 11687234
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  11687274 taaccaagttgtttgggctccagtggcaagaagctccttcc 11687234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25294902 - 25294942
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  25294902 taaccaagttgcttgggctccagtggcaaggagctccttcc 25294942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26207966 - 26207926
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  26207966 taaccaagttgcttgggctccagtggcaaggagctccttcc 26207926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29127861 - 29127901
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  29127861 taaccaagttgtttgggctccagtggcaaggagatccttcc 29127901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35315898 - 35315938
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  35315898 taaccaagttgtttgggctccagtggcaaagagctccttcc 35315938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41630677 - 41630637
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  41630677 taaccaagttgtttgggctccagtgacaaggagctccttcc 41630637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45877396 - 45877436
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  45877396 taaccaagttgtttgggctccagtggcaaggagccccttcc 45877436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51683119 - 51683079
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  51683119 taaccaagttgtttgggctccagtggcgaggagctccttcc 51683079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 10040499 - 10040538
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttc 40  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  10040499 taaccaagttgcttgggctccagtggcaaggagctccttc 10040538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 15320129 - 15320168
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  15320129 aaccaagttgtttggactccagtggcaaggagctccttcc 15320168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 29762319 - 29762280
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  29762319 aaccaagttgcttgggctccagtggcaaggagctccttcc 29762280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 32873712 - 32873673
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  32873712 aaccaagttgtttgggctccagtggcaaggagctcattcc 32873673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22405708 - 22405671
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctcct 38  Q
    |||| |||||||||||||||||||||||||||||||||    
T  22405708 taactaagttgtttgggctccagtggcaaggagctcct 22405671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 33251605 - 33251644
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  33251605 aaccaagttgtttgggctccggtggcaatgagctccttcc 33251644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 37092669 - 37092630
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  37092669 aaccaagttgcttgggctccagtggcaaggagcttcttcc 37092630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 39849015 - 39849054
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  39849015 aaccaagtcgcttgggctccagtggcaaggagctccttcc 39849054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 42412938 - 42412899
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  42412938 aaccaagttgcttgggctccaatggcaaggagctccttcc 42412899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 31072824 - 31072858
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||||||||||||||||| ||||||||||||||||    
T  31072824 caagttgtttgggctccaatggcaaggagctcctt 31072858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 33560808 - 33560842
Alignment:
Q  7 agttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||| |||||||||||||||||||||    
T  33560808 agttgtttgggcttcagtggcaaggagctccttcc 33560842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 7650170 - 7650207
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  7650170 aaccaagttgtttgggttccagtggcaaggagttcctt 7650207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 35998728 - 35998699
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaag 30  Q
    ||||||||||||||||||||||||||||||    
T  35998728 taaccaagttgtttgggctccagtggcaag 35998699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 49082772 - 49082805
Alignment:
Q  7 agttgtttgggctccagtggcaaggagctccttc 40  Q
    |||||||||||||||||||||| |||||||||||    
T  49082772 agttgtttgggctccagtggcagggagctccttc 49082805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 6462358 - 6462394
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  6462358 caagttgcttgggctctagtggcaaggagctccttcc 6462394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7310868 - 7310828
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| ||||||||| ||||||| |||||||||||    
T  7310868 taaccaagttgattgggctccggtggcaatgagctccttcc 7310828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 15334490 - 15334454
Alignment:
Q  175 agacaaacttacgagttgcaatcaattttagtatcaa 211  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  15334490 agacaaacttacgagttacaatcaattttaggatcaa 15334454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30735110 - 30735070
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||| ||||||||||||||| ||||||||||||||| ||||    
T  30735110 taactaagttgtttgggctctagtggcaaggagctcattcc 30735070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30767412 - 30767372
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||| |||||| ||||||||||||||||||||| |||||||    
T  30767412 taactaagttgcttgggctccagtggcaaggagttccttcc 30767372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 34374581 - 34374545
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctcct 38  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  34374581 aaccaagttgtttgggcttcagtgacaaggagctcct 34374545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40944825 - 40944865
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| ||||||||| |||||||| ||||||||||    
T  40944825 taaccaagttgcttgggctccggtggcaagaagctccttcc 40944865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 49198293 - 49198325
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggag 33  Q
    ||||||||||||||||||||||||| |||||||    
T  49198293 taaccaagttgtttgggctccagtgacaaggag 49198325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51060446 - 51060406
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  51060446 taaccaagttgtttggactccagtggcaaatagctccttcc 51060406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21180478 - 21180438
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21180478 taaccaagttgtttgggctccagtggcaaggagctccttcc 21180438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38005344 - 38005384
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38005344 taaccaagttgtttgggctccagtggcaaggagctccttcc 38005384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7747216 - 7747256
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  7747216 taaccaagttgcttgggctccagtggcaaggagctccttcc 7747256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8410073 - 8410113
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  8410073 taaccaagttgcttgggctccagtggcaaggagctccttcc 8410113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20612700 - 20612660
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  20612700 taaccaagttgcttgggctccagtggcaaggagctccttcc 20612660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23500845 - 23500805
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  23500845 taaccaagttgtttgggctccggtggcaaggagctccttcc 23500805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 12864167 - 12864206
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  12864167 aaccaagttgtttgggctccagtgacaaggagctccttcc 12864206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 18902693 - 18902654
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  18902693 aaccaagttgcttgggctccagtggcaaggagctccttcc 18902654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2550810 - 2550848
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  2550810 taaccaagttgcttgggctccagtggcaaggagctcctt 2550848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14853531 - 14853493
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  14853531 taaccaagttgtttgggctccagtggcaaggaactcctt 14853493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 34356148 - 34356182
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagct 35  Q
    |||||||||||||||||||||||||||||||||||    
T  34356148 taaccaagttgtttgggctccagtggcaaggagct 34356182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 45263827 - 45263793
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||||||||||||||||||||||||||||||||||    
T  45263827 caagttgtttgggctccagtggcaaggagctcctt 45263793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 29422158 - 29422195
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  29422158 aaccaagttgtttgggctccagtagcaaggagctcctt 29422195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10026780 - 10026740
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  10026780 taaccaagttgcttgggctccaatggcaaggagctccttcc 10026740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10046640 - 10046600
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  10046640 taaccaagttgcttgggctccaatggcaaggagctccttcc 10046600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18649190 - 18649150
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||| |||| |||||    
T  18649190 taaccaagttgtttgggctccagtggcaagaagctgcttcc 18649150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 21286390 - 21286426
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||||    
T  21286390 caagttgtttgagctccagtggcaaggagctccttcc 21286426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22593077 - 22593117
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  22593077 taaccaagttgcttgtgctccagtggcaaggagctccttcc 22593117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42770815 - 42770775
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  42770815 taaccaagttgcttgggctccagtggcaaagagctccttcc 42770775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44945536 - 44945576
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  44945536 taaccaagttgcttgggctcaagtggcaaggagctccttcc 44945576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 2149359 - 2149328
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaagga 32  Q
    ||||||||||||||||||||||||||||||||    
T  2149359 taaccaagttgtttgggctccagtggcaagga 2149328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 2528504 - 2528465
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  2528504 aaccaaattgtttgggctccagtggcaatgagctccttcc 2528465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 20963268 - 20963233
Alignment:
Q  6 aagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||| ||||||||    
T  20963268 aagttgtttgggctccagtggcaaggacctccttcc 20963233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 29697467 - 29697506
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  29697467 aaccaaggtgtttgggctccagtggcaaggaactccttcc 29697506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 41032068 - 41032029
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  41032068 aaccaaattgcttgggctccagtggcaaggagctccttcc 41032029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 5035231 - 5035269
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttc 40  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  5035231 aaccaagttgtttgggctccagtggcacggagctgcttc 5035269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 41
Target Start/End: Original strand, 25549681 - 25549710
Alignment:
Q  12 tttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||    
T  25549681 tttgggctccagtggcaaggagctccttcc 25549710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 331443 - 331483
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| ||||||||||||||||| |||||| ||||    
T  331443 taaccaagttgcttgggctccagtggcaatgagctctttcc 331483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14169773 - 14169741
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggag 33  Q
    ||||||||||||||||||||||||| |||||||    
T  14169773 taaccaagttgtttgggctccagtgacaaggag 14169741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19976971 - 19976931
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||| |||||||||||||||||||||| ||||| ||||    
T  19976971 taaccaaattgtttgggctccagtggcaagtagctctttcc 19976931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 24179513 - 24179553
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||| ||||||||||||||| |||||||| |||||||||||    
T  24179513 taactaagttgtttgggctctagtggcaaagagctccttcc 24179553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 34722631 - 34722663
Alignment:
Q  9 ttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||| |||||||||||||||    
T  34722631 ttgtttgggctccagtgacaaggagctccttcc 34722663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 37560119 - 37560155
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  37560119 caagttgtttgggctccagtggtaagaagctccttcc 37560155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5855465 - 5855505
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  5855465 taaccaagttgtttgggctccagtggcaaggagctccttcc 5855505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 33418279 - 33418240
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33418279 aaccaagttgtttgggctccagtggcaaggagctccttcc 33418240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 41664019 - 41663982
Alignment:
Q  3 accaagttgtttgggctccagtggcaaggagctccttc 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41664019 accaagttgtttgggctccagtggcaaggagctccttc 41663982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10422731 - 10422771
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  10422731 taaccaagttgtttgggctacagtggcaaggagctccttcc 10422771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32151087 - 32151047
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  32151087 taacaaagttgtttgggctccagtggcaaggagctccttcc 32151047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 48798235 - 48798195
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  48798235 taaccaagttgttggggctccagtggcaaggagctccttcc 48798195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 5503975 - 5504014
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  5503975 aaccaagttgtttgggttccagtggcaaggagctccttcc 5504014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 11398052 - 11398013
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  11398052 aaccaagttgcttgggctccagtggcaaggagctccttcc 11398013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 17642168 - 17642129
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  17642168 aaccaagttgtttgggctccagtgacaaggagctccttcc 17642129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 49078058 - 49078096
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttc 40  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  49078058 aaccaagttgcttgggctccagtggcaaggagctccttc 49078096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 42267688 - 42267725
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  42267688 aaccaagttgtttgggctccactggcaaggagctcctt 42267725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2981096 - 2981056
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  2981096 taaccaagttgcttgggctctagtggcaaggagctccttcc 2981056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8905315 - 8905275
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  8905315 taaccaagttgtttggactctagtggcaaggagctccttcc 8905275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 10173132 - 10173096
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||| |||||||||    
T  10173132 caagttgtttgggctccagtggcaaggtgctccttcc 10173096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18915810 - 18915850
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  18915810 taaccaagttgtttgggcttcagtggcaaggagcttcttcc 18915850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 32819 - 32854
Alignment:
Q  6 aagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||| |||||||||||    
T  32819 aagttgtttgggctccagtggcaatgagctccttcc 32854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 8763935 - 8763974
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  8763935 aaccaagttgcttgggctcccgtggcaaggagctccttcc 8763974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 9853440 - 9853402
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  9853440 aaccaagttgtt-gggctccagtggcaaggagctccttcc 9853402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 12036908 - 12036869
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  12036908 aaccaagttgtttgggctccggtggcaagaagctccttcc 12036869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 15238270 - 15238231
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  15238270 aaccaagttgcttgggctccaatggcaaggagctccttcc 15238231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 25165346 - 25165385
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  25165346 aaccaagttgcttgggctctagtggcaaggagctccttcc 25165385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 31152660 - 31152699
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||| ||||||||||||||| ||||    
T  31152660 aaccaagttgtttgggctctagtggcaaggagctctttcc 31152699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 34877934 - 34877973
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||| |||||||||||||| ||||||    
T  34877934 aaccaagttgtttgggcttcagtggcaaggagcaccttcc 34877973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 41743217 - 41743256
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  41743217 aaccaagttgcttgggctccggtggcaaggagctccttcc 41743256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 892462 - 892424
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  892462 taacgaagttgtttgggcttcagtggcaaggagctcctt 892424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 31576711 - 31576677
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctc 36  Q
    ||||||||||||||||||| |||||||||||||||    
T  31576711 aaccaagttgtttgggctctagtggcaaggagctc 31576677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 50371998 - 50371960
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttc 40  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  50371998 aaccaaattgtttgggctcaagtggcaaggagctccttc 50371960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 26325756 - 26325793
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||||||||| | |||||||||||||||||||||||||    
T  26325756 aaccaagttgctagggctccagtggcaaggagctcctt 26325793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30927893 - 30927852
Alignment:
Q  1 taaccaagttgtttggg-ctccagtggcaaggagctccttcc 41  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  30927893 taaccaagttgttttggactccagtggcaaggagctccttcc 30927852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1764354 - 1764314
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||| |||||||||||||| | |||||||||||||||||||    
T  1764354 taactaagttgtttgggcttctgtggcaaggagctccttcc 1764314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 2567223 - 2567259
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||| || ||||||||||||||||||    
T  2567223 caagttgtttgggcttcactggcaaggagctccttcc 2567259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10336459 - 10336499
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| | |||| |||||||||||||||||||||||    
T  10336459 taaccaagttatctgggttccagtggcaaggagctccttcc 10336499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21429763 - 21429723
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||| || |||| |||||||    
T  21429763 taaccaagttgtttgggctccagtgacatggagttccttcc 21429723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40288642 - 40288602
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||| ||||||||||||||| ||||    
T  40288642 taaccaagttgcttgggctcgagtggcaaggagctctttcc 40288602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 47313059 - 47313023
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  47313059 caagttgtttgggctccagtggcaacgagatccttcc 47313023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 40990 - 41029
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40990 aaccaagttgtttgggctccagtggcaaggagctccttcc 41029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 8873 - 8834
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8873 aaccaagttgtttgggctccagtggcaaggagctccttcc 8834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 5039581 - 5039542
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5039581 aaccaagttgtttgggctccagtggcaaggagctccttcc 5039542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 34659174 - 34659211
Alignment:
Q  4 ccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34659174 ccaagttgtttgggctccagtggcaaggagctccttcc 34659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27875251 - 27875211
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  27875251 taaccaagttgtttgggctccagtggcaagtagctccttcc 27875211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48804628 - 48804668
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  48804628 taaccaagttgcttgggctccagtggcaaggagctccttcc 48804668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 4228914 - 4228875
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  4228914 aaccaagttgtttgggctccagcggcaaggagctccttcc 4228875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 19914865 - 19914826
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  19914865 aaccaagttgcttgggctccagtggcaaggagctccttcc 19914826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 22268192 - 22268153
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  22268192 aaccaagttgtttgggctccagtggcaaggagctcattcc 22268153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 43346942 - 43346903
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  43346942 aaccaagttgtttggactccagtggcaaggagctccttcc 43346903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 43925458 - 43925497
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  43925458 aaccaagttgcttgggctccagtggcaaggagctccttcc 43925497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 23658130 - 23658164
Alignment:
Q  6 aagttgtttgggctccagtggcaaggagctccttc 40  Q
    |||||||||||||||||||||||||||||||||||    
T  23658130 aagttgtttgggctccagtggcaaggagctccttc 23658164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 9685691 - 9685724
Alignment:
Q  8 gttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||    
T  9685691 gttgtttgggctccagtggcaaggagctccttcc 9685724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 1797409 - 1797445
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||| |||||||||||||||||||||||||||||    
T  1797409 caagttgcttgggctccagtggcaaggagctccttcc 1797445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 4195365 - 4195329
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctcct 38  Q
    |||||||||| ||||||||||||||||||||||||||    
T  4195365 aaccaagttgcttgggctccagtggcaaggagctcct 4195329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8734850 - 8734810
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  8734850 taaccaagttgtttgggcgtcagtggcaaggagctccttcc 8734810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14650262 - 14650302
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  14650262 taaccaagttgtttggactctagtggcaaggagctccttcc 14650302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26423451 - 26423411
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  26423451 taaccaagttgtttgggctccagtggcaagaaactccttcc 26423411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47341821 - 47341861
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  47341821 taaccaagttgcttgggctccagtggcaaggagctcattcc 47341861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 5069975 - 5069940
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctccttc 40  Q
    ||||||||||||||||||||||||||||||| ||||    
T  5069975 caagttgtttgggctccagtggcaaggagcttcttc 5069940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 21530694 - 21530733
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  21530694 aaccaagttgcttcggctccagtggcaaggagctccttcc 21530733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 22993530 - 22993491
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  22993530 aaccaagttgcttggactccagtggcaaggagctccttcc 22993491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 24969484 - 24969454
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagct 35  Q
    |||||||||||||||||||||||||||||||    
T  24969484 caagttgtttgggctccagtggcaaggagct 24969454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39420783 - 39420821
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  39420783 taaccaagttgcttgggctctagtggcaaggagctcctt 39420821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 46414620 - 46414658
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  46414620 taactaagttgtttgggctcccgtggcaaggagctcctt 46414658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 13095804 - 13095841
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  13095804 aaccaagttgcttgggctcccgtggcaaggagctcctt 13095841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4973274 - 4973234
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||| || ||||||||| |||||    
T  4973274 taaccaagttgtttgggctccactgacaaggagcttcttcc 4973234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10048040 - 10048000
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||  ||||||||||||||||||||||||    
T  10048040 taaccaagttgcttgaactccagtggcaaggagctccttcc 10048000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 11607080 - 11607116
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  11607080 caagttgcttgggctccagtggcaaggaactccttcc 11607116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17748546 - 17748506
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||| ||||||||| |||| |||||    
T  17748546 taaccaagttgtttgggctctagtggcaagcagcttcttcc 17748506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18785614 - 18785654
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||  ||||||||||||||||| ||||||||||    
T  18785614 taaccaagttgcatgggctccagtggcaagaagctccttcc 18785654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45447915 - 45447955
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| ||||| || ||||||||||||||||||||    
T  45447915 taaccaagttgcttgggttctagtggcaaggagctccttcc 45447955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 45960166 - 45960126
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||| |||||||| ||||||||||| ||||    
T  45960166 taaccaagttgtttgagctccagtagcaaggagctctttcc 45960126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 14107521 - 14107482
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14107521 aaccaagttgtttgggctccagtggcaaggagctccttcc 14107482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 19230720 - 19230681
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19230720 aaccaagttgtttgggctccagtggcaaggagctccttcc 19230681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3030782 - 3030742
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  3030782 taaccaagttgtttgggctccagtggcaaggagctcattcc 3030742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8938657 - 8938697
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  8938657 taaccaagttgtttgggctccagtgacaaggagctccttcc 8938697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21016915 - 21016875
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  21016915 taaccaagttgcttgggctccagtggcaaggagctccttcc 21016875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21898594 - 21898634
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  21898594 taaccaagttgcttgggctccagtggcaaggagctccttcc 21898634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 2271464 - 2271425
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  2271464 aaccaagttgcttgggctccagtggcaaggagctccttcc 2271425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 8612137 - 8612098
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  8612137 aaccaagttgtttggactccagtggcaaggagctccttcc 8612098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 9179899 - 9179860
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  9179899 aaccaagttgtttgggctccagtggcaaggagctcattcc 9179860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 24672029 - 24671992
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||||||||| |||||||||||||||||||||||||||    
T  24672029 aaccaagttgcttgggctccagtggcaaggagctcctt 24671992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 13036164 - 13036128
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||| |||||||||||||||||||||||||||||    
T  13036164 caagttgcttgggctccagtggcaaggagctccttcc 13036128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29333302 - 29333262
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  29333302 taaccaagttgtttgggctctagtggcaatgagctccttcc 29333262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 5253386 - 5253347
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  5253386 aaccaagttgcttgggctccaatggcaaggagctccttcc 5253347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 5759575 - 5759614
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  5759575 aaccaagttgcttgggctccagtggcaaggaactccttcc 5759614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 15643991 - 15643952
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  15643991 aaccaagttgcttgggctccagtggcaaggagctcattcc 15643952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8932607 - 8932647
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||  |||||||||||||||| |||||||    
T  8932607 taaccaagttgtttgaactccagtggcaaggagttccttcc 8932647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8944073 - 8944113
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||  |||||||||||||||| |||||||    
T  8944073 taaccaagttgtttgaactccagtggcaaggagttccttcc 8944113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 9147251 - 9147287
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  9147251 caagttgtttgggctccagtgggaaggagctcattcc 9147287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13468879 - 13468919
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| ||||||||  |||||||||||||||||||    
T  13468879 taaccaagttgcttgggctctggtggcaaggagctccttcc 13468919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17115061 - 17115021
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||| ||| |||||||||||||||||| ||||||||||    
T  17115061 taaccaaattgcttgggctccagtggcaagaagctccttcc 17115021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29444929 - 29444889
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||  |||||||| ||||||||||||||||||||    
T  29444929 taaccaagttacttgggctctagtggcaaggagctccttcc 29444889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32048397 - 32048437
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||| ||||||||||| ||||||||| ||||||||||||||    
T  32048397 taactaagttgtttggactccagtggtaaggagctccttcc 32048437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1446773 - 1446813
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  1446773 taaccaagttgcttgggctccagtggcaaggagctccttcc 1446813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19651609 - 19651569
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  19651609 taaccaagttgtttgggctccagtggcaatgagctccttcc 19651569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 24166397 - 24166437
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  24166397 taaccaagttgattgggctccagtggcaaggagctccttcc 24166437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26480113 - 26480073
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  26480113 taaccaagttgtttgggctccactggcaaggagctccttcc 26480073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29895734 - 29895774
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  29895734 taaccaagttgcttgggctccagtggcaaggagctccttcc 29895774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41339559 - 41339519
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  41339559 taaccaagttgtttgggctctagtggcaaggagctccttcc 41339519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 52950029 - 52950069
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  52950029 taaccaagttgtttgggctctagtggcaaggagctccttcc 52950069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 53599007 - 53599047
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  53599007 taaccaagttgtttgggctccattggcaaggagctccttcc 53599047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 1940937 - 1940898
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  1940937 aaccaagttgtttgggctctagtggcaaggagctccttcc 1940898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 2559255 - 2559294
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  2559255 aaccaagttgtttgggctccagtggcaacgagctccttcc 2559294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 3574609 - 3574570
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  3574609 aaccaagttgcttgggctccagtggcaaggagctccttcc 3574570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 6779159 - 6779198
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  6779159 aaccaagttgtttgggctccagtggcaaggagcttcttcc 6779198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 34667765 - 34667726
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  34667765 aaccaagttgtttgggctctagtggcaaggagctccttcc 34667726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 38165975 - 38166014
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  38165975 aaccaagttgtttgggctccactggcaaggagctccttcc 38166014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 55920982 - 55921021
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  55920982 aaccaagttgcttgggctccagtggcaaggagctccttcc 55921021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 13552068 - 13552101
Alignment:
Q  8 gttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||||||||||||||    
T  13552068 gttgtttgggctccagtggcaaggagctccttcc 13552101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 6032800 - 6032764
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||| |||||||||||||||||||||||||||||    
T  6032800 caagttgcttgggctccagtggcaaggagctccttcc 6032764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7000471 - 7000511
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  7000471 taaccaagttgtttgggctacagtggcaagaagctccttcc 7000511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27248375 - 27248415
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  27248375 taaccaagttgcttgggctccagtggcaacgagctccttcc 27248415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38075380 - 38075420
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  38075380 taaccaagttgtttgggctccagcggcaaggagttccttcc 38075420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41163046 - 41163006
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  41163046 taaccaagttgcttgggctccagtgacaaggagctccttcc 41163006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8888969 - 8889008
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttc 40  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  8888969 taaccaagttgtttgggctctagcggcaaggagctccttc 8889008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 13073486 - 13073525
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  13073486 aaccaagttgtttgggctctagtggcaatgagctccttcc 13073525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 14123964 - 14124003
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||||| ||||||| ||||||||||    
T  14123964 aaccaagttgtttgggctccaatggcaagaagctccttcc 14124003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 14567199 - 14567238
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  14567199 aaccaagttgcttgggctccagtggcaaggagctcattcc 14567238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 27531820 - 27531781
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  27531820 aaccaagttgcttggactccagtggcaaggagctccttcc 27531781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 47078406 - 47078445
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  47078406 aaccaagttgcttgggttccagtggcaaggagctccttcc 47078445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 36
Target Start/End: Complemental strand, 5473007 - 5472977
Alignment:
Q  6 aagttgtttgggctccagtggcaaggagctc 36  Q
    |||||||||||||||||||||||||||||||    
T  5473007 aagttgtttgggctccagtggcaaggagctc 5472977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 12703708 - 12703670
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttc 40  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  12703708 aaccaagttgcttgggctccagtggcaaggagatccttc 12703670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 15829646 - 15829680
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagct 35  Q
    ||||||||||||||||||||||||| |||||||||    
T  15829646 taaccaagttgtttgggctccagtgacaaggagct 15829680  T

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Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 37382497 - 37382531
Alignment:
Q  6 aagttgtttgggctccagtggcaaggagctccttc 40  Q
    |||||||||||||| ||||||||||||||||||||    
T  37382497 aagttgtttgggctacagtggcaaggagctccttc 37382531  T

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Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 4736545 - 4736582
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  4736545 aaccaagttgtttgagctccagtggcaatgagctcctt 4736582  T

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Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 33647669 - 33647706
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  33647669 aaccaagttgcttgggctctagtggcaaggagctcctt 33647706  T

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Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 45789682 - 45789645
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  45789682 aaccaagttgtttgggctccggtggcaatgagctcctt 45789645  T

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Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 12887367 - 12887339
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaa 29  Q
    |||||||||||||||||||||||||||||    
T  12887367 taaccaagttgtttgggctccagtggcaa 12887339  T

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Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 30
Target Start/End: Complemental strand, 15732611 - 15732583
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaag 30  Q
    |||||||||||||||||||||||||||||    
T  15732611 aaccaagttgtttgggctccagtggcaag 15732583  T

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Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 29588687 - 29588723
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  29588687 caagttgattgggctccagtggcaaggagctcattcc 29588723  T

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Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 43458560 - 43458600
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||| |||||||||||||||||| ||||| ||||    
T  43458560 taaccaagttgcttgggctccagtggcaagaagctcattcc 43458600  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 68463 - 68502
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  68463 aaccaagttgtttgggctctagtggcaaggagctccttcc 68502  T

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Target: scaffold0209 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12520 - 12560
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  12520 taaccaagttgtttgggctctagtggcaaggagctacttcc 12560  T

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Target: scaffold0010 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25948 - 25908
Alignment:
Q  1 taaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  25948 taaccaagttgtttgggctccagtagcaaagagctccttcc 25908  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 250176 - 250137
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  250176 aaccaagttgcttgggctccagtggcaaggagctcattcc 250137  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 516 - 555
Alignment:
Q  2 aaccaagttgtttgggctccagtggcaaggagctccttcc 41  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  516 aaccaagttgcttgggctctagtggcaaggagctccttcc 555  T

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Target: scaffold0332 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 15280 - 15314
Alignment:
Q  5 caagttgtttgggctccagtggcaaggagctcctt 39  Q
    |||||||||||||||| ||||||||||||||||||    
T  15280 caagttgtttgggctctagtggcaaggagctcctt 15314  T

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