View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0844_low_1 (Length: 659)

Name: NF0844_low_1
Description: NF0844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0844_low_1
NF0844_low_1
[»] chr1 (78 HSPs)
chr1 (259-559)||(47132695-47132986)
chr1 (263-559)||(44543057-44543355)
chr1 (259-558)||(12634947-12635252)
chr1 (263-558)||(49626694-49626995)
chr1 (259-505)||(32679158-32679411)
chr1 (324-533)||(9341571-9341784)
chr1 (320-558)||(16161674-16161920)
chr1 (291-537)||(15492107-15492361)
chr1 (426-554)||(31692481-31692608)
chr1 (376-541)||(7337690-7337852)
chr1 (367-560)||(40163505-40163697)
chr1 (260-541)||(1742062-1742346)
chr1 (368-554)||(23291656-23291840)
chr1 (298-484)||(15836013-15836203)
chr1 (376-541)||(21947645-21947807)
chr1 (437-559)||(24582912-24583033)
chr1 (320-541)||(32394841-32395063)
chr1 (389-559)||(19060817-19060992)
chr1 (260-541)||(45415340-45415623)
chr1 (376-541)||(5983740-5983901)
chr1 (376-490)||(8211985-8212099)
chr1 (263-558)||(34413100-34413399)
chr1 (259-554)||(34878292-34878583)
chr1 (377-558)||(48750092-48750267)
chr1 (376-541)||(27456444-27456605)
chr1 (376-541)||(31918892-31919053)
chr1 (376-541)||(35484418-35484580)
chr1 (389-556)||(41994337-41994507)
chr1 (260-541)||(14872420-14872704)
chr1 (383-558)||(16262770-16262943)
chr1 (386-558)||(6217837-6218007)
chr1 (251-509)||(15434934-15435192)
chr1 (259-470)||(31983960-31984175)
chr1 (446-559)||(34528700-34528813)
chr1 (377-558)||(36775720-36775905)
chr1 (438-542)||(5855885-5855989)
chr1 (376-484)||(35462118-35462226)
chr1 (259-541)||(10776488-10776772)
chr1 (376-541)||(11462475-11462636)
chr1 (266-468)||(18939109-18939315)
chr1 (357-510)||(13075691-13075844)
chr1 (387-546)||(30506194-30506353)
chr1 (376-537)||(940267-940424)
chr1 (434-541)||(48365760-48365867)
chr1 (368-444)||(37720242-37720318)
chr1 (377-539)||(13144841-13145000)
chr1 (263-540)||(21686657-21686937)
chr1 (377-558)||(568790-568972)
chr1 (434-541)||(39927549-39927656)
chr1 (389-537)||(43412285-43412435)
chr1 (433-495)||(52839625-52839688)
chr1 (328-475)||(50377177-50377330)
chr1 (473-541)||(799813-799881)
chr1 (465-541)||(9687199-9687275)
chr1 (383-541)||(27580155-27580309)
chr1 (465-541)||(35584613-35584689)
chr1 (376-435)||(29738766-29738825)
chr1 (378-547)||(31317655-31317821)
chr1 (463-542)||(44637429-44637508)
chr1 (467-541)||(39987401-39987475)
chr1 (472-541)||(1602086-1602155)
chr1 (488-541)||(7312100-7312153)
chr1 (465-541)||(30879086-30879161)
chr1 (465-541)||(51871873-51871949)
chr1 (434-541)||(18569305-18569412)
chr1 (376-443)||(26535297-26535364)
chr1 (389-480)||(34479407-34479498)
chr1 (437-541)||(7836823-7836924)
chr1 (459-557)||(25563951-25564049)
chr1 (492-542)||(44915655-44915705)
chr1 (493-559)||(45789558-45789624)
chr1 (465-537)||(5701269-5701341)
chr1 (465-541)||(19715890-19715966)
chr1 (433-477)||(23039725-23039769)
chr1 (389-480)||(24597411-24597499)
chr1 (465-541)||(28035149-28035225)
chr1 (465-541)||(34519142-34519218)
chr1 (477-541)||(50148392-50148456)
[»] chr2 (87 HSPs)
chr2 (259-518)||(12647971-12648236)
chr2 (251-559)||(29574638-29574951)
chr2 (271-559)||(24461238-24461533)
chr2 (263-559)||(32448629-32448929)
chr2 (383-541)||(4904173-4904328)
chr2 (377-542)||(6358898-6359066)
chr2 (259-542)||(14955310-14955602)
chr2 (278-558)||(37994081-37994368)
chr2 (323-541)||(43397147-43397366)
chr2 (383-559)||(23933629-23933804)
chr2 (431-559)||(10929626-10929755)
chr2 (388-559)||(12554191-12554359)
chr2 (259-541)||(4098890-4099175)
chr2 (431-551)||(34128702-34128822)
chr2 (317-556)||(6436454-6436694)
chr2 (320-558)||(3308788-3309034)
chr2 (389-559)||(4264395-4264562)
chr2 (376-541)||(38445076-38445238)
chr2 (320-490)||(9169334-9169507)
chr2 (259-539)||(11985260-11985542)
chr2 (320-541)||(36943149-36943374)
chr2 (377-540)||(4041623-4041783)
chr2 (320-490)||(7448097-7448271)
chr2 (419-559)||(37416660-37416800)
chr2 (250-484)||(4778531-4778771)
chr2 (376-541)||(5427896-5428056)
chr2 (448-559)||(17249157-17249267)
chr2 (320-541)||(18763317-18763540)
chr2 (376-541)||(31788366-31788528)
chr2 (325-485)||(19062433-19062597)
chr2 (291-558)||(10237227-10237492)
chr2 (376-469)||(29279667-29279760)
chr2 (320-490)||(7646321-7646497)
chr2 (376-541)||(7677901-7678061)
chr2 (368-559)||(14423224-14423415)
chr2 (320-485)||(27097487-27097655)
chr2 (376-470)||(36691784-36691878)
chr2 (434-541)||(459269-459376)
chr2 (392-541)||(31210635-31210781)
chr2 (481-551)||(11812695-11812765)
chr2 (376-470)||(29173815-29173909)
chr2 (262-359)||(28718159-28718255)
chr2 (463-540)||(37614121-37614198)
chr2 (325-554)||(1415419-1415642)
chr2 (376-521)||(1421585-1421728)
chr2 (425-559)||(28533964-28534099)
chr2 (376-483)||(31128863-31128969)
chr2 (385-542)||(35220245-35220398)
chr2 (498-556)||(19595916-19595974)
chr2 (465-541)||(9986337-9986413)
chr2 (293-540)||(18107776-18108013)
chr2 (431-511)||(20145786-20145865)
chr2 (491-559)||(28871798-28871866)
chr2 (433-495)||(13268667-13268730)
chr2 (433-495)||(19580958-19581021)
chr2 (465-540)||(30420688-30420763)
chr2 (477-543)||(18113891-18113957)
chr2 (410-541)||(42698729-42698854)
chr2 (376-485)||(8809191-8809299)
chr2 (377-434)||(19596008-19596065)
chr2 (465-537)||(7015710-7015782)
chr2 (465-541)||(8805876-8805952)
chr2 (463-539)||(9374553-9374629)
chr2 (428-496)||(14416130-14416198)
chr2 (465-541)||(27249146-27249222)
chr2 (502-554)||(33760208-33760260)
chr2 (433-495)||(7443522-7443585)
chr2 (520-559)||(12647119-12647158)
chr2 (377-463)||(28871864-28871951)
chr2 (46-97)||(37826490-37826541)
chr2 (467-542)||(39641852-39641927)
chr2 (389-470)||(16375872-16375951)
chr2 (467-541)||(36234020-36234094)
chr2 (438-507)||(10548208-10548276)
chr2 (376-417)||(28227834-28227875)
chr2 (431-495)||(31269051-31269116)
chr2 (501-542)||(36175523-36175564)
chr2 (465-541)||(2808467-2808543)
chr2 (465-541)||(3269106-3269182)
chr2 (465-541)||(3269665-3269741)
chr2 (465-541)||(3270224-3270300)
chr2 (265-344)||(6359109-6359189)
chr2 (322-358)||(7678090-7678126)
chr2 (440-480)||(17074884-17074924)
chr2 (259-358)||(20145916-20146016)
chr2 (464-536)||(32092350-32092422)
chr2 (477-541)||(34599009-34599073)
[»] chr4 (91 HSPs)
chr4 (259-559)||(22300642-22300949)
chr4 (259-558)||(51888221-51888528)
chr4 (261-558)||(9643176-9643487)
chr4 (376-559)||(52944231-52944411)
chr4 (259-541)||(26633698-26633982)
chr4 (395-558)||(28857339-28857501)
chr4 (259-541)||(22610981-22611265)
chr4 (251-522)||(4142798-4143074)
chr4 (263-558)||(36204394-36204688)
chr4 (423-558)||(6155236-6155370)
chr4 (376-541)||(13634035-13634197)
chr4 (320-558)||(36161573-36161810)
chr4 (377-558)||(22038812-22038989)
chr4 (378-556)||(18048807-18048980)
chr4 (250-558)||(27651736-27652043)
chr4 (376-559)||(31359756-31359942)
chr4 (376-541)||(21686269-21686430)
chr4 (321-554)||(35348166-35348402)
chr4 (389-541)||(33920984-33921133)
chr4 (383-558)||(48351196-48351366)
chr4 (263-496)||(47320463-47320709)
chr4 (427-546)||(52933965-52934085)
chr4 (260-541)||(2520575-2520861)
chr4 (377-546)||(9713828-9713999)
chr4 (274-542)||(35395696-35395965)
chr4 (263-546)||(36194514-36194796)
chr4 (377-552)||(12199709-12199881)
chr4 (422-559)||(33332578-33332718)
chr4 (383-551)||(4937758-4937925)
chr4 (320-480)||(19853597-19853761)
chr4 (383-556)||(2069592-2069761)
chr4 (324-541)||(32766377-32766596)
chr4 (320-484)||(22558546-22558715)
chr4 (378-541)||(5119261-5119421)
chr4 (390-541)||(17949351-17949499)
chr4 (390-541)||(17953203-17953351)
chr4 (319-541)||(9178215-9178435)
chr4 (327-541)||(54021727-54021942)
chr4 (377-456)||(47158148-47158227)
chr4 (430-524)||(52204375-52204469)
chr4 (431-558)||(31891297-31891428)
chr4 (453-538)||(43853436-43853521)
chr4 (320-541)||(53810887-53811110)
chr4 (378-541)||(56040673-56040831)
chr4 (391-542)||(7008999-7009148)
chr4 (434-540)||(3336152-3336259)
chr4 (383-470)||(52978751-52978837)
chr4 (433-546)||(1621526-1621640)
chr4 (463-540)||(2624512-2624589)
chr4 (322-451)||(45418387-45418521)
chr4 (438-558)||(9048644-9048763)
chr4 (368-519)||(9634586-9634742)
chr4 (424-554)||(53444086-53444213)
chr4 (399-512)||(42032577-42032691)
chr4 (325-490)||(43510063-43510231)
chr4 (465-542)||(868180-868257)
chr4 (431-554)||(8670460-8670580)
chr4 (465-537)||(10389753-10389825)
chr4 (376-541)||(24099094-24099259)
chr4 (383-490)||(29120438-29120545)
chr4 (437-540)||(37683868-37683972)
chr4 (376-480)||(40066140-40066244)
chr4 (404-553)||(7393214-7393365)
chr4 (434-541)||(27593822-27593929)
chr4 (445-488)||(49072805-49072848)
chr4 (431-480)||(19896624-19896673)
chr4 (465-542)||(53616644-53616721)
chr4 (465-541)||(4643876-4643952)
chr4 (376-554)||(10496261-10496430)
chr4 (465-541)||(25273901-25273977)
chr4 (383-435)||(29961055-29961107)
chr4 (465-541)||(43444411-43444487)
chr4 (465-541)||(47417680-47417756)
chr4 (465-536)||(21090170-21090241)
chr4 (465-540)||(29965653-29965728)
chr4 (465-540)||(51318003-51318078)
chr4 (431-540)||(56156670-56156776)
chr4 (462-533)||(9145917-9145992)
chr4 (463-541)||(18138908-18138986)
chr4 (331-406)||(22063940-22064019)
chr4 (46-99)||(22212644-22212698)
chr4 (463-541)||(49126121-49126199)
chr4 (431-495)||(15729937-15730002)
chr4 (377-482)||(37030184-37030287)
chr4 (465-541)||(9528872-9528948)
chr4 (465-541)||(20569273-20569349)
chr4 (465-541)||(34024433-34024508)
chr4 (465-541)||(43154009-43154085)
chr4 (259-310)||(43853272-43853324)
chr4 (465-541)||(49410241-49410317)
chr4 (477-541)||(50766507-50766571)
[»] scaffold0009 (1 HSPs)
scaffold0009 (251-559)||(58097-58400)
[»] chr6 (51 HSPs)
chr6 (250-555)||(30493303-30493609)
chr6 (377-559)||(28981078-28981258)
chr6 (322-507)||(30776508-30776697)
chr6 (293-555)||(1523221-1523485)
chr6 (368-558)||(8102612-8102806)
chr6 (391-542)||(7976203-7976355)
chr6 (250-541)||(33053195-33053489)
chr6 (259-541)||(3913601-3913885)
chr6 (254-558)||(32191740-32192048)
chr6 (386-559)||(1933701-1933877)
chr6 (290-558)||(545835-546110)
chr6 (431-546)||(528372-528487)
chr6 (385-558)||(26588482-26588648)
chr6 (376-541)||(34018461-34018623)
chr6 (376-541)||(606105-606267)
chr6 (384-534)||(7515236-7515382)
chr6 (390-558)||(14801735-14801907)
chr6 (451-555)||(31296793-31296897)
chr6 (376-519)||(32327266-32327406)
chr6 (377-558)||(679006-679189)
chr6 (376-542)||(23128519-23128682)
chr6 (388-483)||(127583-127678)
chr6 (320-463)||(12170335-12170483)
chr6 (431-542)||(34185719-34185830)
chr6 (410-541)||(29319905-29320034)
chr6 (368-541)||(11321496-11321666)
chr6 (431-539)||(19164664-19164772)
chr6 (376-541)||(30608542-30608703)
chr6 (386-537)||(22571399-22571533)
chr6 (434-541)||(25337545-25337652)
chr6 (426-542)||(13546689-13546802)
chr6 (263-490)||(32059691-32059924)
chr6 (376-456)||(68110-68190)
chr6 (465-541)||(8496973-8497049)
chr6 (430-494)||(31852259-31852323)
chr6 (440-528)||(1704158-1704246)
chr6 (465-541)||(23947313-23947389)
chr6 (264-358)||(4010712-4010807)
chr6 (463-518)||(33543638-33543693)
chr6 (446-538)||(3355088-3355177)
chr6 (492-542)||(4010537-4010587)
chr6 (260-496)||(27097685-27097921)
chr6 (431-537)||(31575538-31575644)
chr6 (431-495)||(10744676-10744741)
chr6 (463-536)||(34489254-34489327)
chr6 (465-541)||(7876039-7876115)
chr6 (465-541)||(7881097-7881173)
chr6 (502-558)||(9380047-9380103)
chr6 (477-541)||(12652962-12653026)
chr6 (465-541)||(25064242-25064318)
chr6 (504-556)||(29743019-29743071)
[»] chr5 (63 HSPs)
chr5 (275-558)||(10332558-10332848)
chr5 (263-558)||(28540916-28541214)
chr5 (250-541)||(38597565-38597858)
chr5 (250-541)||(13006996-13007290)
chr5 (263-496)||(39567076-39567314)
chr5 (293-494)||(2979384-2979589)
chr5 (250-435)||(8985063-8985258)
chr5 (261-541)||(6012165-6012448)
chr5 (377-559)||(8088221-8088401)
chr5 (376-541)||(24229811-24229974)
chr5 (263-558)||(14211014-14211305)
chr5 (376-558)||(14726471-14726651)
chr5 (376-523)||(11976980-11977126)
chr5 (377-485)||(6216799-6216907)
chr5 (377-496)||(19103543-19103662)
chr5 (431-559)||(35921005-35921133)
chr5 (376-540)||(8096525-8096687)
chr5 (376-541)||(9113752-9113914)
chr5 (376-541)||(26825330-26825491)
chr5 (320-554)||(31391767-31392007)
chr5 (438-541)||(7613053-7613156)
chr5 (376-537)||(11073931-11074089)
chr5 (443-554)||(19120876-19120986)
chr5 (477-556)||(38110960-38111039)
chr5 (250-430)||(7035995-7036181)
chr5 (383-542)||(25980064-25980220)
chr5 (368-468)||(15571377-15571477)
chr5 (506-558)||(31364497-31364549)
chr5 (377-540)||(19349602-19349757)
chr5 (431-554)||(35850753-35850873)
chr5 (431-480)||(40774853-40774902)
chr5 (460-512)||(26510699-26510751)
chr5 (436-511)||(1582148-1582223)
chr5 (436-511)||(1602592-1602667)
chr5 (465-536)||(30298216-30298287)
chr5 (383-542)||(34881644-34881803)
chr5 (376-451)||(34945321-34945395)
chr5 (465-540)||(36344487-36344562)
chr5 (487-541)||(31314735-31314789)
chr5 (504-546)||(31315932-31315974)
chr5 (482-556)||(41214646-41214720)
chr5 (472-558)||(8984965-8985047)
chr5 (376-456)||(26878190-26878268)
chr5 (465-541)||(7886933-7887009)
chr5 (465-541)||(16981298-16981374)
chr5 (465-541)||(18677460-18677536)
chr5 (465-541)||(26578260-26578336)
chr5 (465-541)||(41184435-41184511)
chr5 (465-537)||(43261818-43261890)
chr5 (437-495)||(20270813-20270872)
chr5 (478-541)||(27576345-27576408)
chr5 (451-552)||(37986129-37986227)
chr5 (433-494)||(37425091-37425153)
chr5 (472-541)||(3271397-3271466)
chr5 (506-539)||(11192419-11192452)
chr5 (433-470)||(20146198-20146235)
chr5 (465-542)||(28235593-28235670)
chr5 (376-475)||(28386838-28386933)
chr5 (431-495)||(33486525-33486590)
chr5 (465-541)||(2057833-2057909)
chr5 (465-541)||(19259807-19259882)
chr5 (464-536)||(20257695-20257766)
chr5 (465-541)||(30371734-30371810)
[»] chr7 (75 HSPs)
chr7 (377-558)||(41553444-41553626)
chr7 (377-558)||(41553789-41553971)
chr7 (377-558)||(41554134-41554316)
chr7 (293-558)||(28476037-28476308)
chr7 (387-558)||(38880588-38880761)
chr7 (320-541)||(37837485-37837708)
chr7 (261-541)||(47590095-47590375)
chr7 (245-546)||(24350859-24351169)
chr7 (260-558)||(3394253-3394557)
chr7 (320-554)||(48061263-48061499)
chr7 (377-559)||(24069403-24069587)
chr7 (259-541)||(30756846-30757131)
chr7 (389-554)||(969461-969630)
chr7 (377-547)||(27996991-27997161)
chr7 (45-133)||(2242838-2242927)
chr7 (327-541)||(34899634-34899850)
chr7 (259-540)||(25067865-25068147)
chr7 (377-542)||(26623816-26623978)
chr7 (319-541)||(48316839-48317063)
chr7 (376-485)||(40993084-40993193)
chr7 (260-557)||(3224421-3224728)
chr7 (377-558)||(22742840-22743025)
chr7 (320-541)||(42978449-42978674)
chr7 (293-558)||(1749157-1749418)
chr7 (322-541)||(12141335-12141556)
chr7 (263-541)||(9450164-9450445)
chr7 (259-541)||(13796956-13797243)
chr7 (377-540)||(11343700-11343873)
chr7 (260-540)||(19404785-19405065)
chr7 (377-556)||(35665147-35665320)
chr7 (445-558)||(5775174-5775286)
chr7 (324-558)||(24770100-24770327)
chr7 (263-435)||(5078526-5078701)
chr7 (357-554)||(39328804-39329001)
chr7 (325-556)||(11653726-11653962)
chr7 (293-554)||(22087131-22087394)
chr7 (389-458)||(26610852-26610921)
chr7 (293-558)||(35132765-35133028)
chr7 (385-559)||(39228926-39229096)
chr7 (404-541)||(19296800-19296934)
chr7 (376-487)||(25287264-25287375)
chr7 (463-542)||(32521921-32522000)
chr7 (321-540)||(45349827-45350051)
chr7 (259-542)||(5348618-5348895)
chr7 (377-554)||(44311806-44311985)
chr7 (291-507)||(38051125-38051345)
chr7 (440-554)||(38798747-38798858)
chr7 (394-541)||(3267239-3267383)
chr7 (431-496)||(48930723-48930788)
chr7 (465-541)||(20116588-20116664)
chr7 (377-477)||(21927821-21927921)
chr7 (487-559)||(29617709-29617781)
chr7 (465-541)||(35667227-35667303)
chr7 (368-541)||(5792691-5792860)
chr7 (320-484)||(39171671-39171842)
chr7 (482-552)||(2407170-2407240)
chr7 (436-542)||(6001998-6002104)
chr7 (437-541)||(8001573-8001674)
chr7 (392-483)||(32675472-32675565)
chr7 (465-541)||(1448825-1448901)
chr7 (465-541)||(23786581-23786657)
chr7 (465-541)||(46339060-46339136)
chr7 (377-518)||(4529982-4530117)
chr7 (500-559)||(24610179-24610238)
chr7 (433-480)||(33530440-33530487)
chr7 (45-99)||(36479283-36479338)
chr7 (434-540)||(17611100-17611206)
chr7 (320-358)||(19296719-19296757)
chr7 (436-542)||(31235786-31235892)
chr7 (385-413)||(286692-286720)
chr7 (389-417)||(5775128-5775156)
chr7 (465-541)||(14627874-14627950)
chr7 (465-537)||(32684674-32684746)
chr7 (465-541)||(42408368-42408444)
chr7 (377-417)||(48930682-48930722)
[»] chr3 (95 HSPs)
chr3 (293-558)||(35175209-35175482)
chr3 (383-556)||(12947286-12947463)
chr3 (251-458)||(50194390-50194603)
chr3 (293-542)||(29921864-29922119)
chr3 (293-542)||(29971017-29971272)
chr3 (386-559)||(29239247-29239422)
chr3 (376-541)||(36461458-36461620)
chr3 (297-558)||(4821623-4821885)
chr3 (376-542)||(53508120-53508288)
chr3 (250-541)||(10232838-10233131)
chr3 (259-540)||(47895928-47896212)
chr3 (263-558)||(21289824-21290127)
chr3 (378-556)||(4396346-4396519)
chr3 (386-558)||(14859396-14859568)
chr3 (320-541)||(40487164-40487387)
chr3 (376-522)||(43488636-43488779)
chr3 (386-559)||(53807867-53808045)
chr3 (326-541)||(9797561-9797774)
chr3 (286-558)||(16235224-16235504)
chr3 (250-541)||(9998234-9998528)
chr3 (250-541)||(10108006-10108297)
chr3 (269-558)||(7546397-7546693)
chr3 (376-496)||(42460646-42460762)
chr3 (259-475)||(7448992-7449213)
chr3 (259-475)||(7457134-7457355)
chr3 (433-555)||(51923676-51923802)
chr3 (320-541)||(6954723-6954946)
chr3 (376-541)||(10229376-10229537)
chr3 (376-541)||(38860147-38860308)
chr3 (376-541)||(48650761-48650923)
chr3 (389-547)||(27706247-27706409)
chr3 (387-558)||(44804934-44805108)
chr3 (259-522)||(45568491-45568756)
chr3 (390-558)||(8914618-8914790)
chr3 (259-490)||(40556488-40556725)
chr3 (376-541)||(52923144-52923306)
chr3 (320-541)||(54148827-54149053)
chr3 (377-541)||(31271834-31271995)
chr3 (385-536)||(22290846-22290998)
chr3 (376-541)||(35864959-35865123)
chr3 (376-541)||(20987826-20987988)
chr3 (384-541)||(21533836-21533990)
chr3 (431-558)||(32246398-32246525)
chr3 (320-490)||(47042124-47042302)
chr3 (377-559)||(51487001-51487189)
chr3 (376-490)||(21431524-21431638)
chr3 (423-554)||(19339122-19339250)
chr3 (383-518)||(20465020-20465152)
chr3 (325-435)||(33579712-33579826)
chr3 (431-556)||(41818163-41818287)
chr3 (263-559)||(628932-629214)
chr3 (376-534)||(12050682-12050836)
chr3 (376-490)||(37040671-37040782)
chr3 (450-556)||(26716119-26716226)
chr3 (368-552)||(20608915-20609087)
chr3 (435-542)||(25461025-25461134)
chr3 (383-490)||(9319963-9320070)
chr3 (259-344)||(14859274-14859360)
chr3 (376-490)||(23799985-23800098)
chr3 (438-528)||(25842634-25842724)
chr3 (435-541)||(31794044-31794150)
chr3 (431-523)||(38545753-38545842)
chr3 (324-541)||(32701341-32701552)
chr3 (482-559)||(52496929-52497006)
chr3 (367-541)||(12149811-12149982)
chr3 (377-554)||(18010919-18011094)
chr3 (448-540)||(26739385-26739477)
chr3 (446-541)||(27094436-27094532)
chr3 (376-540)||(36910668-36910830)
chr3 (465-541)||(42719520-42719596)
chr3 (377-554)||(43016757-43016929)
chr3 (409-554)||(53099723-53099864)
chr3 (377-470)||(27856079-27856173)
chr3 (389-541)||(44959979-44960128)
chr3 (293-546)||(51303665-51303915)
chr3 (389-435)||(52116141-52116187)
chr3 (434-494)||(4019691-4019752)
chr3 (510-559)||(50194344-50194393)
chr3 (445-541)||(3606741-3606837)
chr3 (477-537)||(21488106-21488166)
chr3 (450-518)||(24176141-24176209)
chr3 (465-541)||(35499193-35499269)
chr3 (465-541)||(46934645-46934721)
chr3 (460-541)||(33579863-33579941)
chr3 (260-310)||(38142349-38142400)
chr3 (433-495)||(36540630-36540692)
chr3 (465-542)||(22803025-22803102)
chr3 (488-537)||(46322356-46322405)
chr3 (334-434)||(3785706-3785810)
chr3 (477-541)||(12116113-12116177)
chr3 (250-290)||(20988036-20988076)
chr3 (263-310)||(22290719-22290767)
chr3 (465-541)||(25162439-25162515)
chr3 (477-541)||(39917393-39917456)
chr3 (263-310)||(53808122-53808170)
[»] chr8 (70 HSPs)
chr8 (383-558)||(3240285-3240461)
chr8 (290-558)||(18890707-18890983)
chr8 (263-555)||(24099266-24099566)
chr8 (264-559)||(15344090-15344390)
chr8 (264-559)||(15433155-15433455)
chr8 (264-559)||(15524459-15524759)
chr8 (263-558)||(1239405-1239709)
chr8 (275-558)||(8443519-8443814)
chr8 (386-542)||(8826121-8826276)
chr8 (376-541)||(7883266-7883427)
chr8 (385-558)||(5333337-5333510)
chr8 (431-558)||(1236705-1236831)
chr8 (368-490)||(40619146-40619268)
chr8 (376-541)||(23230546-23230707)
chr8 (368-493)||(14585593-14585718)
chr8 (377-558)||(41896413-41896598)
chr8 (260-463)||(8980977-8981176)
chr8 (397-556)||(471176-471333)
chr8 (461-559)||(29617281-29617379)
chr8 (431-556)||(34609787-34609911)
chr8 (260-541)||(17693639-17693922)
chr8 (430-558)||(26469216-26469344)
chr8 (387-539)||(34492973-34493127)
chr8 (431-556)||(39657404-39657533)
chr8 (320-541)||(20553266-20553493)
chr8 (437-556)||(14916197-14916316)
chr8 (322-541)||(20559769-20559990)
chr8 (322-541)||(20571331-20571552)
chr8 (383-539)||(21237704-21237852)
chr8 (376-470)||(43834093-43834187)
chr8 (341-546)||(6831453-6831669)
chr8 (400-540)||(24419202-24419342)
chr8 (465-541)||(35580470-35580546)
chr8 (481-559)||(8981167-8981245)
chr8 (377-554)||(20227293-20227472)
chr8 (376-541)||(3673346-3673505)
chr8 (320-559)||(7677290-7677528)
chr8 (316-541)||(14544928-14545155)
chr8 (259-540)||(27110491-27110774)
chr8 (376-542)||(27498388-27498551)
chr8 (376-541)||(40211327-40211492)
chr8 (433-495)||(5917698-5917761)
chr8 (258-554)||(25191079-25191377)
chr8 (259-554)||(45445823-45446121)
chr8 (465-542)||(44099928-44100005)
chr8 (263-342)||(1236919-1236999)
chr8 (465-541)||(4808977-4809053)
chr8 (259-435)||(29617585-29617767)
chr8 (465-536)||(11196902-11196973)
chr8 (463-542)||(27747107-27747186)
chr8 (376-541)||(28897613-28897773)
chr8 (425-541)||(10377640-10377753)
chr8 (423-484)||(28086892-28086953)
chr8 (477-554)||(36033404-36033481)
chr8 (465-541)||(9619352-9619428)
chr8 (477-541)||(23851489-23851553)
chr8 (259-358)||(31013781-31013881)
chr8 (433-495)||(2629007-2629070)
chr8 (465-540)||(34611817-34611892)
chr8 (437-541)||(16247248-16247349)
chr8 (383-417)||(26469343-26469377)
chr8 (431-495)||(12248670-12248735)
chr8 (465-542)||(16794305-16794382)
chr8 (465-542)||(28239846-28239923)
chr8 (465-541)||(2655883-2655959)
chr8 (465-541)||(11464184-11464260)
chr8 (472-540)||(15889576-15889644)
chr8 (461-541)||(36532906-36532986)
chr8 (482-546)||(41060269-41060333)
chr8 (465-537)||(42448026-42448098)
[»] scaffold0445 (1 HSPs)
scaffold0445 (259-554)||(1121-1419)
[»] scaffold0039 (1 HSPs)
scaffold0039 (320-558)||(92939-93186)
[»] scaffold0127 (1 HSPs)
scaffold0127 (320-541)||(15331-15554)
[»] scaffold0088 (1 HSPs)
scaffold0088 (250-470)||(50554-50780)
[»] scaffold0603 (1 HSPs)
scaffold0603 (293-554)||(7529-7791)
[»] scaffold0017 (1 HSPs)
scaffold0017 (376-541)||(32774-32937)
[»] scaffold0888 (1 HSPs)
scaffold0888 (263-558)||(1688-1982)
[»] scaffold0026 (1 HSPs)
scaffold0026 (320-554)||(71878-72114)
[»] scaffold0347 (2 HSPs)
scaffold0347 (437-558)||(5988-6109)
scaffold0347 (359-412)||(5895-5948)
[»] scaffold0492 (1 HSPs)
scaffold0492 (298-456)||(12733-12895)
[»] scaffold0136 (2 HSPs)
scaffold0136 (375-541)||(10069-10231)
scaffold0136 (377-435)||(37947-38005)
[»] scaffold0042 (1 HSPs)
scaffold0042 (431-559)||(92505-92633)
[»] scaffold0884 (1 HSPs)
scaffold0884 (376-554)||(1987-2160)
[»] scaffold0262 (1 HSPs)
scaffold0262 (376-458)||(1926-2007)
[»] scaffold0634 (1 HSPs)
scaffold0634 (367-541)||(8403-8574)
[»] scaffold0002 (1 HSPs)
scaffold0002 (463-541)||(453936-454014)
[»] scaffold0064 (2 HSPs)
scaffold0064 (263-344)||(19262-19343)
scaffold0064 (518-559)||(19083-19124)
[»] scaffold0113 (1 HSPs)
scaffold0113 (461-540)||(36683-36762)
[»] scaffold0264 (1 HSPs)
scaffold0264 (465-518)||(20414-20467)
[»] scaffold0007 (1 HSPs)
scaffold0007 (45-78)||(172645-172678)
[»] scaffold0426 (1 HSPs)
scaffold0426 (465-541)||(6311-6387)
[»] scaffold0021 (1 HSPs)
scaffold0021 (504-556)||(4193-4245)
[»] scaffold0015 (1 HSPs)
scaffold0015 (486-546)||(4074-4134)


Alignment Details
Target: chr1 (Bit Score: 143; Significance: 9e-75; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 259 - 559
Target Start/End: Original strand, 47132695 - 47132986
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca 358  Q
    ||||||||||||||||||||| ||||||||||||||||||||| || ||||| ||| ||| |||||||||| ||||||||||||||            |     
T  47132695 ctagttttttagtgagagaaactccaacttcttttaagttttcgttttctttcactcgttgaggaggggtgattttaggtcatttttc----------cc 47132784  T
Q  359 tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctgagtgc 457  Q
    ||||||| |||||||  |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||||||||||     
T  47132785 tctgcatcctttttcccttttctttcaatctaaataagtgatttctacatatatcaagtgttttcttttgtgctttttcgtgatttcgtcgtctgagtgg 47132884  T
Q  458 gacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcac 557  Q
    | ||||||||||| |||| | ||||||| |||||||| | || |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  47132885 ggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatattgaaagatcagcttcagtcaatcac 47132984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 263 - 559
Target Start/End: Original strand, 44543057 - 44543355
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca--- 358  Q
    ||||||||||||||||| |||||||||| | ||||||||| |||||||| |||  |  |||| ||||| |||||||| ||| | |||| || |||||       
T  44543057 ttttttagtgagagaaactccaacttctctctaagttttccttctctttcactcatcgaggaagggtgcttttaggttattctttgacctaaaatcagcc 44543156  T
Q  359 tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcg 458  Q
    |||||||  ||||||  ||| || || ||||||||||||||||| |||| |||||||||||| |||||||||||||| ||||||| ||||||| ||||||    
T  44543157 tctgcatcttttttcccttt-ctttcgatctaaataagtgattttcacaaatatcaagtgttttcttttgtgttttttgtgatttcgtcgtctaagtgcg 44543255  T
Q  459 acgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    || ||||||||| |||| | || |||| |||||||||| || || |||| |||||||||| | |||||||||||||||||||||||||||||||||||||    
T  44543256 actttgtgttgttcgtcgtattatgcggcgttgtttgatttggcatcttattgcggtgttcg-ttggttcatattgaaagatcagctttagtcaatcaca 44543354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 259 - 558
Target Start/End: Original strand, 12634947 - 12635252
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    ||||||||||||||||||||| || ||||||| | || ||||| ||||||||| ||| ||  |||| | ||||||||||||||||||||||| || ||||    
T  12634947 ctagttttttagtgagagaaactcaaacttctctctatgttttttttctctttcactcgtcgaggatgtgtggttttaggtcattttctgacctataatc 12635046  T
Q  358 atc----tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt--tcgtgattttgtcgtct 451  Q
    | |    |||||  ||||||    || | |||||||||||||||||||| ||||||||||||||||| |||||||||| ||  ||||| ||||| |||||    
T  12635047 acccctttgcatcttttttcccaattttgtcaatctaaataagtgattttcacatatatcaagtgttttcttttgtgtcttgttcgtg-ttttgacgtct 12635145  T
Q  452 gagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtc 551  Q
    | ||||| ||||||||||| |||| ||||||||| |||||||||| ||| ||| |||| | ||||||  |||||||||||||||||||||| |||||||     
T  12635146 gtgtgcggcgttgtgttgttcgtcgtcttgtgcggcgttgtttgattttacgttttgtagtggtgttcatttggttcatattgaaagatcaactttagta 12635245  T
Q  552 aatcaca 558  Q
    |||||||    
T  12635246 aatcaca 12635252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 263 - 558
Target Start/End: Original strand, 49626694 - 49626995
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca--- 358  Q
    |||||| |||||||||| |||||||||| | ||||| ||| |||||||| |||  |  ||||||||||||||||||||||| | |||| || |||||       
T  49626694 tttttttgtgagagaaactccaacttctctctaagtgttccttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcaccc 49626793  T
Q  359 -tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttc--gtgattttgtcgtctgagt 455  Q
     |||||||  ||||||   ||||| || ||||||||||||||||| |||| |||||||| ||| ||||||||||||||   ||||||| |||||||  ||    
T  49626794 ctctgcatcttttttcccctttctttctatctaaataagtgattttcacaaatatcaagcgttttcttttgtgttttttttgtgatttcgtcgtctatgt 49626893  T
Q  456 gcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatc 555  Q
    ||||| ||||||||| |||| ||||||||| |||||||||| ||  | ||||||||||||||| | ||||||||||||||||||||||||| ||||||||    
T  49626894 gcgaccttgtgttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttgcggtgttcg-ttggttcatattgaaagatcagcttcagtcaatc 49626992  T
Q  556 aca 558  Q
    |||    
T  49626993 aca 49626995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 259 - 505
Target Start/End: Complemental strand, 32679411 - 32679158
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||||||||||||||||||||||||||||| | | |||||||||||||||||| ||| ||  |||||||||||||||| |||||||| |||| |||||||    
T  32679411 ctagttttttagtgagagaaattccaacttttctctaagttttctttctctttcactcgtcgaggaggggtggttttatgtcattttttgacatagaatc 32679312  T
Q  358 atc----tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttg--tgtttttcgtgattttgtcgtct 451  Q
    |||    ||||    |||| | |||||| ||||| ||||||||||||||||||||||||||| |||| | |||||  | |||||||||||||  ||||||    
T  32679311 atccctctgcaccaattttatcttttctttcaatttaaataagtgatttccacatatatcaattgttttattttggttttttttcgtgatttcatcgtct 32679212  T
Q  452 gagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtc 505  Q
    ||||||| ||||||||||| |||||||||||||| ||| |||||| || |||||    
T  32679211 gagtgcggcgttgtgttgttcgtcatcttgtgcggcgtagtttgatttcgcgtc 32679158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 324 - 533
Target Start/End: Original strand, 9341571 - 9341784
Alignment:
Q  324 ggggtggttttaggtcattttctgacttagaatcatctgcat---tctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgtt 420  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||   ||||||||   ||||| ||||| ||||||||  |||| |||||||||||||||||    
T  9341571 ggggtggttttaggtcattttttgacttagaatcacctgtatgcatctttttcctctttctttcaatataaataagaaattttcacatatatcaagtgtt 9341670  T
Q  421 ctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgttt 519  Q
     |||||||||||||| |||||||| ||||||||||||    ||| |||||| |||| ||||||||  |||||||||| | || |||||||||||||||||    
T  9341671 ttcttttgtgtttttacgtgatttcgtcgtctgagtggagtgttatgttgttcgtcgtcttgtgcagcgttgtttgattctgtgtcttgttgcggtgttt 9341770  T
Q  520 gtttggttcatatt 533  Q
    ||||| ||||||||    
T  9341771 gtttgattcatatt 9341784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 320 - 558
Target Start/End: Original strand, 16161674 - 16161920
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaa 415  Q
    |||||||||  |||||||||| ||| |||| ||||||||    ||| |||  |||||||  ||| | ||||||||||||||||||||||||||| |||||    
T  16161674 aggaggggtaattttaggtcaatttttgacctagaatcacctctcttcatattttttctcctttatttcaatctaaataagtgatttccacatacatcaa 16161773  T
Q  416 gtgttctcttttgtgtttt-tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgt----t 510  Q
    || || ||||||||||||| ||||||||| ||||||| |||||||||||||||||| |||| ||||||||| |||||||||| ||  | |||| |    |    
T  16161774 gtttt-tcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcacatcttttgttgt 16161872  T
Q  511 gcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||||||| ||||||||| ||||||||||||||||| || ||||||||    
T  16161873 gcggtgttcgtttggttcgtattgaaagatcagcttaagacaatcaca 16161920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 291 - 537
Target Start/End: Original strand, 15492107 - 15492361
Alignment:
Q  291 tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatcatc----tgcattctttttctgttttctatcaa 386  Q
    ||||||||||||||||||||||||  || ||||| |||||||||||||| |||| |||| || |||||||    ||||| |||||||  ||| || ||||    
T  15492107 tttaagttttctttctcttttactcattgaggagaggtggttttaggtcttttt-tgacctaaaatcatcattttgcat-ctttttccattt-ctttcaa 15492203  T
Q  387 tctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttc------gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatctt 480  Q
    ||||||||| |||||| |||||||||||||| || ||||||||||||||       |||||||  ||||||||||||||||||||||||| ||| || ||    
T  15492204 tctaaataaatgattttcacatatatcaagttttttcttttgtgttttttctttgtgtgatttcatcgtctgagtgcgacgttgtgttgttcgttatttt 15492303  T
Q  481 g-tgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
    | ||| || |||||||| || ||||||||||| || ||||||||||||||||||||||    
T  15492304 gatgcaacattgtttgatttcgcgtcttgttggggagtttgtttggttcatattgaaa 15492361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 426 - 554
Target Start/End: Complemental strand, 31692608 - 31692481
Alignment:
Q  426 ttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttgg 525  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||  ||| |||||||||  ||||||||| ||||| ||||||||||||||| | ||||    
T  31692608 ttgtgtttttcgtgattttgtcgtctgagtgtgacattgcgttgtttgtcgtcttgtgcggtgttgtttgattttgcttcttgttgcggtgttcg-ttgg 31692510  T
Q  526 ttcatattgaaagatcagctttagtcaat 554  Q
    ||||||||||||||| |||||||||||||    
T  31692509 ttcatattgaaagattagctttagtcaat 31692481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 7337852 - 7337690
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| ||  ||||||||||||| |||||||  |||||| |||||| ||||||||||| ||||    
T  7337852 ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtc 7337753  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     |||||||| ||   |||||| || ||||||||| ||||||||||||  |||||||||||||||||    
T  7337752 gtcttgtgcaac---gtttgatttcgcgtcttgtcgcggtgtttgttcagttcatattgaaagatc 7337690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 367 - 560
Target Start/End: Complemental strand, 40163697 - 40163505
Alignment:
Q  367 ctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgt 465  Q
    |||||||||||| || || || ||||||||||||||||||||||||||| | || | | | |||||||| | |||||| ||||||| |||| ||||||||    
T  40163697 ctttttctgttt-ctttctatataaataagtgatttccacatatatcaaattttttatct-gtgttttttcatgatttcgtcgtctcagtgtgacgttgt 40163600  T
Q  466 gttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacagt 560  Q
    ||| | |||| |||||||| || || ||||| | ||||| ||||||||||||||||||||||  ||||| ||||||||||| |||||||||||||    
T  40163599 gttcttcgtcgtcttgtgcaacattctttgattatgcgttttgttgcggtgtttgtttggtttctattggaagatcagcttcagtcaatcacagt 40163505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 260 - 541
Target Start/End: Original strand, 1742062 - 1742346
Alignment:
Q  260 tagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca 358  Q
    ||||||| |||||||||||| || ||||||||| |||  || ||||||||||   |  | |||||  ||||||||||||||||||| |||| ||||||||    
T  1742062 tagttttctagtgagagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggtggttttaggtcattttttgacctagaatca 1742161  T
Q  359 ----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgt-gtttttcgtgattttgtcgtctga 453  Q
        ||| |||  |||  |  |||||| |||||||||||||||| ||| |||||||||||||| || ||||||||  ||||| ||||||| ||||||| |    
T  1742162 cccctctccatcttttcccccttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtatttttttgtgatttcgtcgtctaa 1742261  T
Q  454 gtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||| ||||||||||| |||| |||||||||||   |||||| || ||||||||| | |||||| ||||  ||| ||||||||||||    
T  1742262 gtgcggcgttgtgttgttcgtcgtcttgtgcgac---gtttgatttcgcgtcttgtcgtggtgttcgtttatttcctattgaaagatc 1742346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 368 - 554
Target Start/End: Complemental strand, 23291840 - 23291656
Alignment:
Q  368 tttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgt-ttttcgtgattttgtcgtctgagtgcgacgttgtg 466  Q
    ||||||| |||||| |||||||||||||||| ||| |||||||||||||| || |||||||||| |||| ||||||| ||||||| ||| || |||||||    
T  23291840 tttttctcttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgtttttttgtgatttcgtcgtctaagtacggcgttgtg 23291741  T
Q  467 ttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
    |||| | | ||||||||||||   |||||| || || |||||| |||||||| ||||  ||| |||||||||||| || | |||||||    
T  23291740 ttgttcattatcttgtgcgac---gtttgatttcgcttcttgtcgcggtgttcgtttatttcctattgaaagatcggcatcagtcaat 23291656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 298 - 484
Target Start/End: Original strand, 15836013 - 15836203
Alignment:
Q  298 tttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatcatctgcattc---tttttctg-ttttctatcaatctaaat 393  Q
    ||||||||||||| | |  | |||||| ||||||||||||||||||| |||| |||||||| |   || |   |||||||  |||||||||||| |||||    
T  15836013 tttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcaccgctatacatatttttctccttttctatcaatttaaat 15836112  T
Q  394 aagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgc 484  Q
    ||||| ||| |||||| ||||||||||   |||||||||||||||||||||||||||| |||| ||| ||||||||| |||| ||||||||    
T  15836113 aagtggttttcacatacatcaagtgtttcgttttgtgtttttcgtgattttgtcgtctaagtgtgacattgtgttgttcgtcgtcttgtgc 15836203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 21947807 - 21947645
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| || |||||||||||||| ||||||| ||||||| |||||  || |||||||| ||||    
T  21947807 ttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttttgtgatttcgtcgtctaagtgcagcgctgtgttgttcgtc 21947708  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||| |   ||||  |||||| || ||||||||| ||||||||||||| |||| ||||||||||||    
T  21947707 gtctcg---gacggcgtttgatttcgcgtcttgtcgcggtgtttgtttagttcttattgaaagatc 21947645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 437 - 559
Target Start/End: Original strand, 24582912 - 24583033
Alignment:
Q  437 gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaa 536  Q
    ||||||||||||||| |||| ||| ||||||||| | ||  |||||||| |||||||||| || || ||||||||||||||| | |||||||||||||||    
T  24582912 gtgattttgtcgtctaagtgtgaccttgtgttgttcatcgccttgtgcggcgttgtttgatttggcatcttgttgcggtgttcg-ttggttcatattgaa 24583010  T
Q  537 agatcagctttagtcaatcacag 559  Q
    |||||||||| ||||||||||||    
T  24583011 agatcagcttcagtcaatcacag 24583033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 320 - 541
Target Start/End: Original strand, 32394841 - 32395063
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatcatc----tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaa 415  Q
    ||||||||||||||||||||||||| |||||||||||||||    |||||  |||| |  |||||| ||||||||||| |||| ||| ||||| ||||||    
T  32394841 aggaggggtggttttaggtcattttttgacttagaatcatccctctgcatctttttccccttttctttcaatctaaatgagtggttttcacatctatcaa 32394940  T
Q  416 gtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggt 515  Q
    || ||  ||||||||||||| ||||||| |||||   |||||| ||||||||||  | || |||||||| ||   |||||| ||  ||| || | |||||    
T  32394941 gtttttccttttgtgttttttgtgatttcgtcgttcaagtgcggcgttgtgttgctcatcgtcttgtgcaac---gtttgatttcccgttttatcgcggt 32395037  T
Q  516 gtttgtttggttcatattgaaagatc 541  Q
    |||||||  |||| ||||||||||||    
T  32395038 gtttgttcagttcctattgaaagatc 32395063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 389 - 559
Target Start/End: Original strand, 19060817 - 19060992
Alignment:
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtgtttttc------gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgt 482  Q
    |||||||| ||||| |||| |||||||| ||| |||||| |||||||       ||||||| ||||||| |||||||| ||||||||| |||| ||||||    
T  19060817 taaataagcgattttcacaaatatcaagcgttttcttttatgttttttttttttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttgt 19060916  T
Q  483 gcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    | | |||||||||| ||  | ||||||||| ||||| ||| ||||||||||||||||| ||||| ||||||||||||    
T  19060917 gtggcgttgtttgatttgacatcttgttgcagtgttcgtt-ggttcatattgaaagattagcttcagtcaatcacag 19060992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 260 - 541
Target Start/End: Original strand, 45415340 - 45415623
Alignment:
Q  260 tagttttttagtgagagaaattccaacttct-tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca 358  Q
    ||||||| |||||||||||| | |||||||| |||||  |||||||||  ||   || |  ||||||||||||||||||||||||| |||  ||||||||    
T  45415340 tagttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcgtttatcgaggaggggtggttttaggtcattttttgatctagaatca 45415439  T
Q  359 ----tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctga 453  Q
        ||| |||  ||||||   |||||| ||||| |||||||||| ||| ||||| |||||||| || |||| ||| ||||| ||||||| ||||||| |    
T  45415440 cccctctacatcttttttccccttttctttcaatttaaataagtggttttcacatctatcaagttttttcttgtgttttttt-gtgatttcgtcgtctaa 45415538  T
Q  454 gtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||| |||| |||||| |||| ||||||||  ||||   ||| || ||||||||| ||||||||||||  |||| ||||||||||||    
T  45415539 gtgcggcgttttgttgttcgtcgtcttgtgcatcgtt---tgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatc 45415623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 376 - 541
Target Start/End: Original strand, 5983740 - 5983901
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| || |||||||||| || ||| ||||| |||||||| ||  ||||||||||||| ||||||| ||||||| |||||| |||| |||||| ||||    
T  5983740 ttttctttcgatctaaataaatggttttcacatctatcaagtttttgcttttgtgttttt-gtgatttcgtcgtctaagtgcggcgttttgttgttcgtc 5983838  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||||| ||||   ||| || | ||||||| ||||||||||||| |||| ||||||||||||    
T  5983839 gtcttgtgcggcgtt---tgatttcgtgtcttgtcgcggtgtttgtttagttcctattgaaagatc 5983901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 376 - 490
Target Start/End: Complemental strand, 8212099 - 8211985
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| | |||||||||||||| ||| |||||||||||||| ||| ||||||||||||| ||||||| ||||||| | |||| ||||||||||| | ||    
T  8212099 ttttctttaaatctaaataagtggttttcacatatatcaagttttcccttttgtgttttttgtgatttcgtcgtctaaatgcggcgttgtgttgttcatc 8212000  T
Q  476 atcttgtgcgacgtt 490  Q
     ||||||||| ||||    
T  8211999 gtcttgtgcggcgtt 8211985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 558
Target Start/End: Complemental strand, 34413399 - 34413100
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca--- 358  Q
    ||||||||||||||||| ||   ||||| | |||||||| ||||||||| |||| |  || ||||||| |||||||||| ||| | |  ||||||||       
T  34413399 ttttttagtgagagaaactctgccttctctctaagttttttttctctttcacttatcgagtaggggtgattttaggtcaattttttatctagaatcaccc 34413300  T
Q  359 -tctgcat-tctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagt 455  Q
     ||||||| | ||||||   ||||| |||||||||||||||||||| |||||| ||       | ||||| |||||||| |||||||||||||||| |||    
T  34413299 ctctgcatctttttttcccctttctttcaatctaaataagtgattttcacatacat-------tttctttcgtgttttttcgtgattttgtcgtcttagt 34413207  T
Q  456 gcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtc 551  Q
    ||||| ||||||||| |||| ||||||||| |||||||||| || || |||| |    ||||||||| ||||| ||  ||||||||||||||||  || |    
T  34413206 gcgacattgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgatttgtattgaaagatcagctccagac 34413107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 259 - 554
Target Start/End: Complemental strand, 34878583 - 34878292
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttct-tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaa-- 355  Q
    |||||||| |||||||||||| |||||||||| |||||  |||||||||||||   |  |  ||||||||||||||||||||||||| |||| |||||      
T  34878583 ctagttttctagtgagagaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatc 34878484  T
Q  356 --tcatctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctga 453  Q
      |||||| |||  ||||||  |||||| ||||| |||||||||| ||| |||| ||||||||     | |||||| ||||| |||| || ||||| | |    
T  34878483 actcatctacatcttttttccattttctttcaatttaaataagtggttttcacacatatcaag-----ttttttgt-ttttttgtgacttcgtcgtttaa 34878390  T
Q  454 gtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaa 553  Q
    || || ||||||||||| |||| |||||||   || ||||||| || |||| |||| ||||||||||||   ||| |||||||||||| || | ||||||    
T  34878389 gtacggcgttgtgttgttcgtcgtcttgtg---cggtgtttgatttcgcgttttgtcgcggtgtttgttaatttcctattgaaagatcggcatcagtcaa 34878293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 377 - 558
Target Start/End: Original strand, 48750092 - 48750267
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtca 476  Q
    ||||| |||||||||||||||||||| |||||| ||||||| ||          | ||||||||||| |  |||| |||||||||||||||||| ||||     
T  48750092 tttctttcaatctaaataagtgattttcacatacatcaagtttt----------tctttcgtgatttcgctgtcttagtgcgacgttgtgttgttcgtcg 48750181  T
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||||||||||||||||||| || || |||| |    ||||||||| ||||| ||| ||||||||||||||||| || ||||||||    
T  48750182 tcttgtgcgacgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgattcgtattgaaagatcagcttcagacaatcaca 48750267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 376 - 541
Target Start/End: Original strand, 27456444 - 27456605
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| | ||||||| ||||  |  ||||||||||||| |||||||  |||||| | |||| |||||||||||  |||    
T  27456444 ttttctttcaatctaaataagtggttttcgcatatattaagttcttccttttgtgttttt-gtgatttcatcgtctaattgcggcgttgtgttgttagtc 27456542  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||||| |||||   ||| || ||||||||| |||||||| |||| |||| ||||||||||||    
T  27456543 atcttgtgcaacgtt---tgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagatc 27456605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 376 - 541
Target Start/End: Original strand, 31918892 - 31919053
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    ||||||||||||||||||||||| ||| |||||||||||||| || |||||||| ||||| ||||||| ||||||| | |||| || ||||||||  | |    
T  31918892 ttttctatcaatctaaataagtggttttcacatatatcaagttttttcttttgtattttt-gtgatttcgtcgtctaattgcggcgatgtgttgttagcc 31918990  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    || ||||||| |   |||||| || ||||||||| || ||||| |||| |||| | ||||||||||    
T  31918991 attttgtgcggc---gtttgatttcgcgtcttgtcgcagtgttcgtttagttcctgttgaaagatc 31919053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 35484580 - 35484418
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| || ||  |||||||||| ||| ||| ||||||| |||||| ||||||||||| ||||    
T  35484580 ttttctttcaatctaaataagtggttttcacatctatcaagttttttcaattgtgttttttgtggtttcgtcgtctaagtgcggcgttgtgttgttcgtc 35484481  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     |||||||   |||  ||||  || ||||||||| ||||||||||||   ||| ||||||||||||    
T  35484480 gtcttgtg---cgtcatttgctttcgcgtcttgtcgcggtgtttgttcaattcctattgaaagatc 35484418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 389 - 556
Target Start/End: Original strand, 41994337 - 41994507
Alignment:
Q  389 taaataagtgatttc-cacatatatcaagtgttctcttttgtgtttttc--gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcg 485  Q
    ||||||||||||||  |||||||||||||| || |||| ||| |||||   |||||||   ||||||| |||| ||||||||||| | || ||||||||     
T  41994337 taaataagtgatttttcacatatatcaagttttttcttgtgttttttttttgtgatttcaacgtctgaatgcggcgttgtgttgttcatcgtcttgtgca 41994436  T
Q  486 acgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
     |||||||||| || |  |||||||| |||||| |||| ||||||||||||||||||| || |||||||||    
T  41994437 gcgttgtttgatttcggatcttgttgtggtgttcgtttcgttcatattgaaagatcagtttcagtcaatca 41994507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 260 - 541
Target Start/End: Original strand, 14872420 - 14872704
Alignment:
Q  260 tagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca 358  Q
    |||||||||||||||||||| |||||||||||| | |  |||||||||  || | |  |  || ||| |||||||| ||||||||| |||||||||||||    
T  14872420 tagttttttagtgagagaaactccaacttctttctgaactttctttcttcttcattcatcgagaaggtgtggttttcggtcattttttgacttagaatca 14872519  T
Q  359 ----tctgcattcttttt--ctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctg 452  Q
        ||| |||  |||||  |  |||||| ||||| |||||||||| |||  ||| ||||||||| ||  | ||||||||||| ||||||||||||||      
T  14872520 ctcctctacatctttttttccctttttctttcaatgtaaataagtggtttttacaaatatcaagtttttccatttgtgttttttgtgattttgtcgtcca 14872619  T
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| | ||||||||| |||| ||||||||| |   |||||| || ||||||||| ||||||||  ||| |||| ||||||||||||    
T  14872620 agtgcggcattgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtgttcatttagttc-tattgaaagatc 14872704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 383 - 558
Target Start/End: Original strand, 16262770 - 16262943
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttc-gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttg 481  Q
    |||||||||||||||||||| || ||||| |   | || | ||||||||||||  |||||||||||||||||||| | || || |||||  ||  | |||    
T  16262770 tcaatctaaataagtgattttcagatataac---tttttttttttgtgtttttttgtgattttgtcgtctgagtgtggcgatgcgttgttggttgttttg 16262866  T
Q  482 tgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||| |||||||||| || ||||||||||| |||||| ||||| |||||||||||| |||| ||  |||||||||||    
T  16262867 tgcggcgttgtttgatttcgcgtcttgttgtggtgttcgtttgattcatattgaaaaatcaactgcagtcaatcaca 16262943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 386 - 558
Target Start/End: Complemental strand, 6218007 - 6217837
Alignment:
Q  386 atctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcg 485  Q
    |||||| || |||||||||||| ||||||| | || ||||  ||||||||| |||||| |||||| | | | | | |||| || | |||  |||||||||    
T  6218007 atctaattacgtgatttccacacatatcaaattttttctt--gtgtttttcttgatttcgtcgtcggcgcgtggcattgtattattcgttgtcttgtgcg 6217910  T
Q  486 acgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    ||||||||||| |||||||||||||  | |||| |||||||  |||||||||||||| ||| |||||||||||    
T  6217909 acgttgtttgattttgcgtcttgttatgttgttcgtttggtatatattgaaagatcaacttcagtcaatcaca 6217837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 251 - 509
Target Start/End: Complemental strand, 15435192 - 15434934
Alignment:
Q  251 agccgactctagttttttagtgagagaaattccaacttcttttaagtt-ttctttctcttttacttgttaaggaggggtggttttaggtcattttctgac 349  Q
    ||||| ||||||||||||| ||||||||| |||||||||| | ||    ||||||||  || | |  | ||||||||| |||||||||||||||| |||     
T  15435192 agccggctctagttttttattgagagaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggcggttttaggtcattttttgat 15435093  T
Q  350 ttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttg 445  Q
     ||||||||    ||| |||  ||||||  |||||| |||||||||||||||| ||| |||||| ||||||| ||  ||||  ||||||| ||||||| |    
T  15435092 ctagaatcaaccctctacatcttttttcccttttctttcaatctaaataagtgtttttcacataaatcaagtttttccttt--tgtttttagtgatttcg 15434995  T
Q  446 tcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgt 509  Q
    |||||| |||||| |||| |||||| |||  ||||||||| |   |||||| ||||||||||||    
T  15434994 tcgtctaagtgcggcgttctgttgttcgttgtcttgtgcggc---gtttgattttgcgtcttgt 15434934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 259 - 470
Target Start/End: Original strand, 31983960 - 31984175
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||| |||||||||||||||| |||||||||| | |||  |||||||||  |||  |  | |||||| ||||||||||||||||||| |||| ||||| |    
T  31983960 ctagatttttagtgagagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggtggttttaggtcattttttgacctagaagc 31984059  T
Q  358 a----tctgcat-tctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctg 452  Q
    |    ||| ||| | ||||||  |||||| || ||||||||||||| ||| |||||||||||||| ||  |||  |||||||| ||||||| |||||||     
T  31984060 acctctctacatctttttttcccttttctttcgatctaaataagtggttttcacatatatcaagtttttcctt--gtgttttttgtgatttcgtcgtcta 31984157  T
Q  453 agtgcgacgttgtgttgt 470  Q
    |||||| |||||||||||    
T  31984158 agtgcggcgttgtgttgt 31984175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 446 - 559
Target Start/End: Original strand, 34528700 - 34528813
Alignment:
Q  446 tcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagct 545  Q
    |||||| |||||| | ||||||||| |||| ||||| |||  ||||||||| || || ||||||| |||||||| ||||||| |||||||||||||| ||    
T  34528700 tcgtctaagtgcggcattgtgttgttcgtcgtcttgcgcggtgttgtttgatttcgcatcttgtttcggtgtttctttggtttatattgaaagatcaact 34528799  T
Q  546 ttagtcaatcacag 559  Q
    | ||||||||||||    
T  34528800 tcagtcaatcacag 34528813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 377 - 558
Target Start/End: Complemental strand, 36775905 - 36775720
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    ||||| ||||||||||||| |||||| |||||| ||||||| || ||||| |||||||| ||||||||  || | | |||||||||||||||||| ||||    
T  36775905 tttctttcaatctaaataaatgattttcacatacatcaagtttt-tctttcgtgttttttcgtgatttcttcattttagtgcgacgttgtgttgttcgtc 36775807  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
     ||||||||   ||||||||| || || |||| |    |||||| || ||||||||| |||||||||||| |||| || ||||||||    
T  36775806 gtcttgtgcagtgttgtttgatttcgcatcttttgttgtgcggtattcgtttggttcgtattgaaagatcggcttcagacaatcaca 36775720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 438 - 542
Target Start/End: Original strand, 5855885 - 5855989
Alignment:
Q  438 tgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
    |||||||||||||| ||| |||||||||||||   ||||||||||||||| |||||||| ||| |||||||||| ||||||| ||| |||  |||| |||    
T  5855885 tgattttgtcgtctaagtacgacgttgtgttgcttgtcatcttgtgcgacattgtttgattttacgtcttgttgtggtgtttattttgtttttattaaaa 5855984  T
Q  538 gatca 542  Q
    |||||    
T  5855985 gatca 5855989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 376 - 484
Target Start/End: Complemental strand, 35462226 - 35462118
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| ||||| |||||||||| ||| ||||| |||||||| ||  ||||||||||||| ||||||| ||||| | |||||| ||||||||||| ||||    
T  35462226 ttttctttcaatttaaataagtggttttcacatctatcaagtttttccttttgtgttttttgtgatttcgtcgtgtaagtgcggcgttgtgttgttcgtc 35462127  T
Q  476 atcttgtgc 484  Q
     ||||||||    
T  35462126 gtcttgtgc 35462118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 259 - 541
Target Start/End: Complemental strand, 10776772 - 10776488
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||||||||||| |||||||| ||||| |||| | |||  |||||||||| || | |  |  |||| |||||||||||| ||||||| |||| |||||||    
T  10776772 ctagttttttagggagagaaactccaatttctctctaaactttctttctccttcattcatcgaggaagggtggttttagatcattttttgacctagaatc 10776673  T
Q  358 a----tctgcattcttttt---ctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtc 450  Q
    |    ||| |||  |||||   || |||||| |||||||||||||||| |||  |||||||   ||||||  |||||||| |||| ||||||| ||||||    
T  10776672 acccatctacatcttttttttcctattttctttcaatctaaataagtggtttttacatata---agtgtttccttttgtgctttttgtgatttagtcgtc 10776576  T
Q  451 tgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    | |||||| ||||||||||| |||| |||| |||| |   |||||| | |||||||||| |||||||| ||||  ||| | ||||||||||    
T  10776575 taagtgcggcgttgtgttgttcgtcgtcttatgcggc---gtttgattgtgcgtcttgtcgcggtgttcgtttacttccttttgaaagatc 10776488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 11462636 - 11462475
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| ||||||||||||||||  || ||||| |||||||| || |||||||||||||| ||||||| ||| ||| ||| || | || |||||| ||||    
T  11462636 ttttctttcaatctaaataagtgggtttcacatctatcaagttttttcttttgtgttttt-gtgatttcgtcatctaagtccggcattttgttgttcgtc 11462538  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||||| |   |||||| ||  |||||||| ||||||||||||| |||| ||||| ||||||    
T  11462537 gtcttgtgcggc---gtttgatttcacgtcttgtcgcggtgtttgtttagttcctattggaagatc 11462475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 266 - 468
Target Start/End: Original strand, 18939109 - 18939315
Alignment:
Q  266 tttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca----tc 360  Q
    |||||||||||||| | || ||||| | ||||||||||||||| || | |  |  ||||| ||||||||||||||||||| |||  ||||||||    ||    
T  18939109 tttagtgagagaaacttcaccttctctctaagttttctttctccttcattaatcgaggagaggtggttttaggtcattttttgatctagaatcacctctc 18939208  T
Q  361 tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgac 460  Q
    ||||| |||||||   ||||| ||||| |||||||||  ||| |||| ||||||||| ||   |||||||||||| ||||||| |||||||||||| | |    
T  18939209 tgcat-ctttttcccctttctttcaatttaaataagtagttttcacacatatcaagtttttcattttgtgttttttgtgatttcgtcgtctgagtgaggc 18939307  T
Q  461 gttgtgtt 468  Q
    ||||||||    
T  18939308 gttgtgtt 18939315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 357 - 510
Target Start/End: Complemental strand, 13075844 - 13075691
Alignment:
Q  357 catctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatc-aagtgttctcttttgtg-tttttcgtgattttgtcgtctgag 454  Q
    |||||||||  |||||||  ||||| |||||||||||||||||||  |||||||||| |||| || ||||||||| |||||||||||||  |||||||||    
T  13075844 catctgcatcttttttctcatttctttcaatctaaataagtgatt--cacatatatctaagtattttcttttgtgttttttcgtgatttcatcgtctgag 13075747  T
Q  455 tgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgtt 510  Q
    ||||   || |||||| |||  ||||||||  |||||||||| | ||| |||||||    
T  13075746 tgcgtatttatgttgttcgttgtcttgtgcagcgttgtttgattctgcatcttgtt 13075691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 546
Target Start/End: Complemental strand, 30506353 - 30506194
Alignment:
Q  387 tctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt-tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcg 485  Q
    |||||||| ||||||| |||||||||||||| || || | ||| |||| |||| ||||  ||||||||||| ||| |||||||||  ||| |||||||      
T  30506353 tctaaataggtgattttcacatatatcaagttttttcctatgttttttctcgtaatttcatcgtctgagtgtgactttgtgttgttagtcgtcttgtgta 30506254  T
Q  486 acgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctt 546  Q
    || ||| |||| ||||||||  ||||||||||| ||||| ||| |||||||||||| ||||    
T  30506253 acattgattgattttgcgtcc-gttgcggtgttcgtttgcttcctattgaaagatcggctt 30506194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 376 - 537
Target Start/End: Original strand, 940267 - 940424
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| | ||| |||||||||| ||| |||||||||||||| || || || |||||||| ||||||  ||||||| ||||||  ||||||||||  |||    
T  940267 ttttcttttaatttaaataagtggttttcacatatatcaagttttttcctt-gtgttttttgtgattccgtcgtctaagtgcggtgttgtgttgtttgtc 940365  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
     |||||||||||   |||||| || ||||||||| |||||||| ||||  ||| ||||||||    
T  940366 gtcttgtgcgac---gtttgatttcgcgtcttgtcgcggtgttcgtttaattcctattgaaa 940424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 434 - 541
Target Start/End: Complemental strand, 48365867 - 48365760
Alignment:
Q  434 ttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatatt 533  Q
    |||||||||| ||| |||||||| |  | |||||||| ||||||||||||| ||||||||||| |||  ||||||| ||||||||  |||| ||||||||    
T  48365867 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcatcttgtgcaacgttgtttgattttttgtcttgtagcggtgttcatttgattcatatt 48365768  T
Q  534 gaaagatc 541  Q
    ||| ||||    
T  48365767 gaaggatc 48365760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 368 - 444
Target Start/End: Complemental strand, 37720318 - 37720242
Alignment:
Q  368 tttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgatttt 444  Q
    |||||||  ||||| ||||||||||||||||||||||||||| ||||||| || ||||||||| ||||||||||||||    
T  37720318 tttttctcctttctttcaatctaaataagtgatttccacatacatcaagt-ttttcttttgtgttttttcgtgatttt 37720242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 377 - 539
Target Start/End: Complemental strand, 13145000 - 13144841
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtca 476  Q
    ||||| |||||||||||||||| ||| || ||||||||| | ||  |||||||||||||  |||||| ||||||| | |||| |||||||||||| ||      
T  13145000 tttctttcaatctaaataagtggttttcatatatatcaactttttccttttgtgttttttttgatttcgtcgtctaaatgcggcgttgtgttgtctgttg 13144901  T
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaaga 539  Q
    |||||||| ||    ||||| || ||||||||| |  |||||  |||| ||||||||||||||    
T  13144900 tcttgtgcaac---atttgatttcgcgtcttgtcgtagtgttcatttgattcatattgaaaga 13144841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 263 - 540
Target Start/End: Original strand, 21686657 - 21686937
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca--- 358  Q
    ||||||||||||||||| | |||||| ||| ||| ||||||||||||||   |  |  ||||| | || |||||||||||||| |||  ||||||||       
T  21686657 ttttttagtgagagaaactgcaacttttttctaaattttctttctctttcgttcatcgaggagagatgattttaggtcattttttgatctagaatcactc 21686756  T
Q  359 tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttc--gtgattttgtcgtctgagtg 456  Q
    ||| |||  ||||||  |||||| ||||| |||||||||| ||| |||  || |||||| || | |||| | |||||   ||||||| ||||||| |||     
T  21686757 tctacatcttttttccattttctttcaatttaaataagtggttttcacccatttcaagttttttttttttttttttttttgtgatttcgtcgtctaagta 21686856  T
Q  457 cgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    || ||||||||||| |||| ||||||||| |   |||||| ||||||| |||| ||||||||||||   ||| |||||||||||    
T  21686857 cggcgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgcgttttgtcgcggtgtttgttaatttcctattgaaagat 21686937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 377 - 558
Target Start/End: Complemental strand, 568972 - 568790
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtt-tttcgtgattttgtcgtctgagtgcgacgttgtgttgtc-cgt 474  Q
    ||||| |||||||||||||||||||| ||| ||||||  |  || |||||||  || ||| ||||||||||||| |||||| | | |||| ||||  |||    
T  568972 tttctttcaatctaaataagtgattttcacgtatatcgtgctttttcttttgcattctttggtgattttgtcgtatgagtgtggcattgtattgtttcgt 568873  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    | ||||||||   ||||||||| ||| || |||||| ||||||| |||| || ||| ||||||||||| | |||||||||||||    
T  568872 cgtcttgtgcagtgttgtttgattttacgacttgttacggtgttcgtttagtacatgttgaaagatcaac-ttagtcaatcaca 568790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 434 - 541
Target Start/End: Complemental strand, 39927656 - 39927549
Alignment:
Q  434 ttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatatt 533  Q
    |||||||||| ||| || ||||| |  | |||||||| |||| ||||||| | |||||||||| ||  |||||||||||||||||  |||| ||||||||    
T  39927656 ttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttgttgcggtgttcatttgtttcatatt 39927557  T
Q  534 gaaagatc 541  Q
    ||||||||    
T  39927556 gaaagatc 39927549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 537
Target Start/End: Original strand, 43412285 - 43412435
Alignment:
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtgttttt--cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcga 486  Q
    |||||||||||||| ||  ||||||||  |   ||||||||||||||  |||||||||||||||||||||    | |||||||| | || |||| |||||    
T  43412285 taaataagtgattttcatttatatcaaaagaattcttttgtgtttttttcgtgattttgtcgtctgagtgatgtgctgtgttgttcatcgtcttttgcga 43412384  T
Q  487 cgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
    |||| ||||| || | ||||  |||| ||||||||||| ||||||||||||    
T  43412385 cgttatttgagttcgtgtctaattgcagtgtttgtttgattcatattgaaa 43412435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 433 - 495
Target Start/End: Original strand, 52839625 - 52839688
Alignment:
Q  433 tttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatc-ttgtgcgacgttgtttg 495  Q
    ||||||||||||||||||| ||||||||||||| |||| ||||||| ||||| |||||||||||    
T  52839625 tttcgtgattttgtcgtcttagtgcgacgttgttttgttcgtcatctttgtgagacgttgtttg 52839688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 328 - 475
Target Start/End: Original strand, 50377177 - 50377330
Alignment:
Q  328 tggttttaggtcattttctgacttagaatcatctg---cattctttttctgttttctatcaatctaaataagtgatttccacatatat---caagtgttc 421  Q
    ||||||||||||||||| |||| ||||||||||     |||| |||| |  |||||| ||||| |||||||||| ||| |||||||||   || |||||     
T  50377177 tggttttaggtcattttttgacctagaatcatccctctcatttttttcccattttctttcaatttaaataagtggttttcacatatattatcacgtgttt 50377276  T
Q  422 tcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
     ||||||| ||||| ||||||| ||||||| ||| || ||||||||||| ||||    
T  50377277 ccttttgtattttttgtgatttcgtcgtctaagtacggcgttgtgttgttcgtc 50377330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 541
Target Start/End: Complemental strand, 799881 - 799813
Alignment:
Q  473 gtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||||||||   |||||||||||||  ||||| ||||||||||  |||||||||||||||||||||    
T  799881 gtcatcttgtgcagtgttgtttgaatttttgtcttattgcggtgttcatttggttcatattgaaagatc 799813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 9687275 - 9687199
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||||||||||||| |||||||||| ||  | |||| ||||||||||  |||| ||||||||||||||||    
T  9687275 tgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcttgcggtgttcatttgattcatattgaaagatc 9687199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 27580309 - 27580155
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgt 482  Q
    |||||||| ||||||| ||| |||||||||||||| ||  ||||||| ||||| ||||||| ||||| | | |||| ||||||||||| |||| | | ||    
T  27580309 tcaatctatataagtggttttcacatatatcaagtttttccttttgtattttt-gtgatttcgtcgtttaaatgcggcgttgtgttgttcgtcgtatcgt 27580211  T
Q  483 gcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    | | |    ||||| |||||||||||| ||||||||  ||| |||| ||||||||||||    
T  27580210 gtggc---atttgattttgcgtcttgtcgcggtgttcatttagttcctattgaaagatc 27580155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 35584689 - 35584613
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||| ||||||  |||||||||  |||| ||||||||||||||||    
T  35584689 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 35584613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 376 - 435
Target Start/End: Complemental strand, 29738825 - 29738766
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt 435  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| || ||||||||||||||    
T  29738825 ttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttt 29738766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 547
Target Start/End: Original strand, 31317655 - 31317821
Alignment:
Q  378 ttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcat 477  Q
    |||| ||||| |||||||||| ||| |||| ||||||||| ||   |||||||||||| || |||| ||||| ||||||||  |||||||| | |||| |    
T  31317655 ttctttcaatttaaataagtggttttcacacatatcaagtttttcattttgtgttttttgtaatttcgtcgtgtgagtgcggtgttgtgttattcgtcgt 31317754  T
Q  478 cttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagcttt 547  Q
    ||||||  |   ||||||| ||  ||||||||| ||||  | ||||| ||| ||||||||||||| ||||    
T  31317755 cttgtgaaa---tgtttgatttcacgtcttgtttcggttctcgtttgattcctattgaaagatcaacttt 31317821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 542
Target Start/End: Original strand, 44637429 - 44637508
Alignment:
Q  463 tgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    |||||||| |||  |||||||||||||||||||  ||  ||||||||| |||||||  |||| |||||||||||||||||    
T  44637429 tgtgttgttcgtagtcttgtgcgacgttgtttggtttcccgtcttgttacggtgttcatttgattcatattgaaagatca 44637508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 541
Target Start/End: Original strand, 39987401 - 39987475
Alignment:
Q  467 ttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||| |||| ||||||||| |||||||||| ||| ||| ||| |||||||||  |||| ||||||||||||||||    
T  39987401 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattgctgcggtgttcatttgattcatattgaaagatc 39987475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 472 - 541
Target Start/End: Original strand, 1602086 - 1602155
Alignment:
Q  472 cgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||| |||| ||||||||||||||| ||||| ||||||||||| ||| ||||| ||  ||||||||||||    
T  1602086 cgtcgtcttctgcgacgttgtttgattttgcatcttgttgcggcgttcgtttgatttctattgaaagatc 1602155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 488 - 541
Target Start/End: Complemental strand, 7312153 - 7312100
Alignment:
Q  488 gttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||||| ||| |||||||||||||||||  |||| ||||||||||||||||    
T  7312153 gttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatc 7312100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 30879086 - 30879161
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||| ||||||  |||||||||  |||| ||||||||||||||||    
T  30879086 tgttgttcgtcgtcttgtgcg-cgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 30879161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 51871873 - 51871949
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| |||||||||||||||||||  ||| |||||| ||||||||||  |||  ||| ||||||||||||    
T  51871873 tgttgttcgtcgtcttgtgcgacgttgtttgcttttccgtcttcttgcggtgttcattttattcttattgaaagatc 51871949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 434 - 541
Target Start/End: Complemental strand, 18569412 - 18569305
Alignment:
Q  434 ttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatatt 533  Q
    |||||||||| ||| | |||||| |  | |||||||| ||||||||||| ||  |||||| || ||  |||||||||||||||||  |||  ||||||||    
T  18569412 ttcgtgatttcgtcatttgagtgtggtggtgtgttgttcgtcatcttgtccggtgttgttagatttcccgtcttgttgcggtgttcatttaattcatatt 18569313  T
Q  534 gaaagatc 541  Q
    ||||||||    
T  18569312 gaaagatc 18569305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 443
Target Start/End: Original strand, 26535297 - 26535364
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattt 443  Q
    |||||| |||||||||||||||| ||| ||||||||| |||| ||  |||||||||| || |||||||    
T  26535297 ttttctttcaatctaaataagtggttttcacatatattaagtttttccttttgtgttatttgtgattt 26535364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 480
Target Start/End: Original strand, 34479407 - 34479498
Alignment:
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatctt 480  Q
    |||||||||| ||| |||| ||||||||| || | |||||||||||| |||||||  ||||||||||  | |||||| |||| |||| ||||    
T  34479407 taaataagtggttttcacacatatcaagttttttattttgtgttttttgtgatttcctcgtctgagtatggcgttgtattgttcgtcgtctt 34479498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 541
Target Start/End: Complemental strand, 7836924 - 7836823
Alignment:
Q  437 gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaa 536  Q
    |||||||  |||||| |||||| ||||||||||| |||| |||||||||||   |||||| || ||||||||| |||| ||| ||||  ||| ||| |||    
T  7836924 gtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgac---gtttgatttcgcgtcttgtcgcggcgttcgtttatttcctatcgaa 7836828  T
Q  537 agatc 541  Q
    |||||    
T  7836827 agatc 7836823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 459 - 557
Target Start/End: Original strand, 25563951 - 25564049
Alignment:
Q  459 acgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcac 557  Q
    |||||||||||| |||  |||||  ||||||||||||| ||| | || ||| ||||  || ||||||||| |||| |||||||| |||||||| |||||    
T  25563951 acgttgtgttgttcgttgtcttgcacgacgttgtttgattttacatcctgtggcggaattcgtttggttcttattaaaagatcaactttagtccatcac 25564049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 492 - 542
Target Start/End: Original strand, 44915655 - 44915705
Alignment:
Q  492 tttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    ||||| ||||||| |||| |||||||| |||| ||||||||||||||||||    
T  44915655 tttgattttgcgttttgtcgcggtgttcgtttagttcatattgaaagatca 44915705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 559
Target Start/End: Original strand, 45789558 - 45789624
Alignment:
Q  493 ttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    |||| ||| ||| |||||||| |||||||||||||| |||||||| |||| ||||| ||||| ||||    
T  45789558 ttgattttacgtgttgttgcgatgtttgtttggttcctattgaaatatcaactttaatcaattacag 45789624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 537
Target Start/End: Original strand, 5701269 - 5701341
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
    |||||| |||| ||||||||| |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||    
T  5701269 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa 5701341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 19715966 - 19715890
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||  |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  19715966 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 19715890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 433 - 477
Target Start/End: Complemental strand, 23039769 - 23039725
Alignment:
Q  433 tttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcat 477  Q
    |||||||||||||| |||| ||||||||||||| |||| ||||||    
T  23039769 tttcgtgattttgtggtcttagtgcgacgttgttttgttcgtcat 23039725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 480
Target Start/End: Complemental strand, 24597499 - 24597411
Alignment:
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatctt 480  Q
    ||||||| |||||| |||||||||||||| || ||||  || ||||| |||||| | ||||||||||| || |||||||||| |||| ||||    
T  24597499 taaataaatgattttcacatatatcaagt-ttatctt--gtattttttgtgattatatcgtctgagtgtgatgttgtgttgtacgtcgtctt 24597411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 28035149 - 28035225
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||  ||||||  | |||||||  |||| ||||||||||||||||    
T  28035149 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtacggtgttcatttgattcatattgaaagatc 28035225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 34519142 - 34519218
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| | ||||||| |||||||||| ||  |||||| ||| ||||||  |||| ||||||||||||||||    
T  34519142 tgttgttcgtcgttttgtgcggcgttgtttgatttctcgtcttcttgtggtgttcatttgattcatattgaaagatc 34519218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 541
Target Start/End: Original strand, 50148392 - 50148456
Alignment:
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||||||| |||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  50148392 tcttgtgcgacattgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 50148456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 3e-71; HSPs: 87)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 259 - 518
Target Start/End: Complemental strand, 12648236 - 12647971
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttct-tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||| |||||||    
T  12648236 ctagtttttaagtgagagaaactccaacttctctttaagttttctttctcttttactcgttgaggaggggtggttttaggtcattttttgacctagaatc 12648137  T
Q  358 a----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgt-ttttcgtgattttgtcgtctg 452  Q
    |    ||  |||  ||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||  ||||||     
T  12648136 acccctccacatcttttttctcttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgtattttcgtgatttcatcgtcta 12648037  T
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtt 518  Q
    ||||||  |||||||||| |||| ||||||||| |||||||||| ||  |||||||||||||||||    
T  12648036 agtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtcttgttgcggtgtt 12647971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 251 - 559
Target Start/End: Complemental strand, 29574951 - 29574638
Alignment:
Q  251 agccgactctagttttttagtgagagaaattccaacttcttttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgact 350  Q
    ||||||| ||||||||||||||||||||| || ||||||||| ||||||| ||||||||| ||| ||  ||||||||||||||||| ||||||| ||||     
T  29574951 agccgaccctagttttttagtgagagaaactctaacttcttt-aagttttatttctctttcactcgtcgaggaggggtggttttagatcattttttgacc 29574853  T
Q  351 tagaatcatc---tgcattcttttt-ctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt---tcgtgattt 443  Q
    |||||||| |   ||||| |||||| |  |||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||   |||||||||    
T  29574852 tagaatcaccctgtgcatccttttttccattttctttcaatctaaataagtgatttccacatatatcaagtgtttt-ttttgtgttttgtttcgtgattt 29574754  T
Q  444 tgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcag 543  Q
     |||||| ||||||| ||||||||||| |||| ||||||||| | |||||||| ||  | | ||||||| ||||||||||| ||||||||||||||| ||    
T  29574753 cgtcgtccgagtgcggcgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtttgtttgattcatattgaaagattag 29574654  T
Q  544 ctttagtcaatcacag 559  Q
    ||| ||||||||||||    
T  29574653 cttcagtcaatcacag 29574638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 271 - 559
Target Start/End: Original strand, 24461238 - 24461533
Alignment:
Q  271 tgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca----tctgcat 365  Q
    |||| |||| |||||||||| | ||||||||  |||||||| |||  |||||||||||||||||||||||||||| |||| ||||||||    |||||||    
T  24461238 tgagtgaaactccaacttctctctaagtttttattctctttcactcattaaggaggggtggttttaggtcattttttgacctagaatcactcctctgcat 24461337  T
Q  366 tctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttg 464  Q
     | |||||| |||  | |||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||  |||||| |||||   |||||    
T  24461338 ccgttttctcttt--tttcaatctaaataagtgatttccacatatatcaagtgtttttttttgtgtttttacgtgattccgtcgtccgagtgttgcgttg 24461435  T
Q  465 tgttgtccgtcatcttgtgcgacgttgtttg---aatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    |||||| |||  | ||||||| |||||||||   | |||||| |||||||||||||| ||||||||||||||||||||||| ||| |||||| |||||    
T  24461436 tgttgttcgttgttttgtgcggcgttgtttgattattttgcgccttgttgcggtgttcgtttggttcatattgaaagatcaacttcagtcaaccacag 24461533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 263 - 559
Target Start/End: Complemental strand, 32448929 - 32448629
Alignment:
Q  263 ttttttagtgagagaaattccaacttct-tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca--- 358  Q
    ||||||||||||||||| || ||||||| ||||| ||||  || ||||| |||  |  ||||||||||||||||||||||| | |||| || |||||       
T  32448929 ttttttagtgagagaaactctaacttctctttaaatttttcttttctttcactcatcgaggaggggtggttttaggtcattatttgacctaaaatcaccc 32448830  T
Q  359 -tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttc-gtgattttgtcgtctgagtg 456  Q
     ||||||| |||||||   ||||| || ||||||||||||||||| |||  |||||||| ||| | ||||||||||||  ||||||| ||||||| ||||    
T  32448829 ctctgcat-ctttttcccctttctttcgatctaaataagtgattttcaccaatatcaagcgttttattttgtgtttttttgtgatttcgtcgtctaagtg 32448731  T
Q  457 cgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    |||| ||||||||| |||| ||||||||| |||||||||| || || ||||||||||||||| | ||||||||||||||||||||||||| |||||||||    
T  32448730 cgaccttgtgttgttcgtcgtcttgtgcgccgttgtttgatttggcatcttgttgcggtgttcg-ttggttcatattgaaagatcagcttcagtcaatca 32448632  T
Q  557 cag 559  Q
    |||    
T  32448631 cag 32448629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 4904328 - 4904173
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgt 482  Q
    |||||||||||||||| ||| |||||||||||||| || |||||||||||||| ||||||| ||||||  |||| | ||||||||||| |||| ||||||    
T  4904328 tcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttttgtgatttcgtcgtcaaagtgtggcgttgtgttgttcgtcgtcttgt 4904229  T
Q  483 gcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||   |||||| |||| |||||||||||||||| ||||||||||||||||||||||    
T  4904228 gcgac---gtttgattttgtgtcttgttgcggtgttcgtttggttcatattgaaagatc 4904173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 377 - 542
Target Start/End: Complemental strand, 6359066 - 6358898
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    ||||| ||||| |||||||||| |||| ||||||||||||| || || ||||||||||| ||||||||||||||||||||| | ||||||||||| ||||    
T  6359066 tttctttcaatttaaataagtgttttctacatatatcaagttttttcctttgtgttttttcgtgattttgtcgtctgagtgtgtcgttgtgttgttcgtc 6358967  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttg--cggtgtttgtttggttcatattgaaagatca 542  Q
     ||||||||  |||||||||| || || ||||||||  ||||||||||||||||| |||||||||||||    
T  6358966 gtcttgtgcagcgttgtttgatttcgcatcttgttgtacggtgtttgtttggttcttattgaaagatca 6358898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 259 - 542
Target Start/End: Original strand, 14955310 - 14955602
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttttaa-gttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    ||||||||||||| ||| ||| || | ||||| |||| |||||||| |||||| |||  |  |||||||||| ||||| |||| ||| |||| |||||||    
T  14955310 ctagttttttagtaagataaactctatcttctcttaaagttttcttcctctttcactcatcgaggaggggtgattttaagtcaatttttgacctagaatc 14955409  T
Q  358 atc----tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctga 453  Q
    |||    |||||  ||||||   ||||| ||||||||||||||||||||||||||| ||||||| || |||||  | ||||| ||||||||||||||| |    
T  14955410 atccctctgcatcttttttcctctttctttcaatctaaataagtgatttccacatacatcaagttttttctttcttattttttgtgattttgtcgtctta 14955509  T
Q  454 gtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtc--ttgt--tgcggtgtttgtttggttcatattgaaagatca 542  Q
     |||||||||||||||| | |||| ||||||| |||||||||| || || ||  ||||  ||||||||| |||||||||||||||||| ||||    
T  14955510 atgcgacgttgtgttgttcatcattttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcatattgaaatatca 14955602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 278 - 558
Target Start/End: Original strand, 37994081 - 37994368
Alignment:
Q  278 aattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca----tctgcattcttttt 372  Q
    ||||||||||||| | || ||||||||||||||| | |  |  |||| |||||||||||||||||||| |||| ||||||||    |||||||| | |||    
T  37994081 aattccaacttctctctaggttttctttctctttcaatcatcgaggaagggtggttttaggtcatttt-tgacctagaatcacccctctgcattttgttt 37994179  T
Q  373 ctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttt---ttcgtgattttgtcgtctgagtgcgacgttgtgttg 469  Q
    |   ||||| || || |||||||||||||| |||||| |||||||||| |||| ||| |||   |||||||||| || ||||||||||| ||||||||||    
T  37994180 cccctttctttcgatttaaataagtgattttcacatagatcaagtgttttcttgtgtttttatcttcgtgatttcgttgtctgagtgcggcgttgtgttg 37994279  T
Q  470 tccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    | |||| || ||| || | |||||||| ||||| ||||||||| |||||  |||| |||||||||||| |||||||| |||||||||||    
T  37994280 ttcgtcttcctgtacggcattgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaaaatcagcttcagtcaatcaca 37994368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 323 - 541
Target Start/End: Complemental strand, 43397366 - 43397147
Alignment:
Q  323 aggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtg 418  Q
    |||||||||||||||||||||| |||| ||||||||    ||| ||| |||||||  |||||| |||||||||||||||| ||| ||||||||||||||     
T  43397366 aggggtggttttaggtcattttttgacctagaatcacctctctacat-ctttttcccttttctttcaatctaaataagtggttttcacatatatcaagtt 43397268  T
Q  419 ttctcttttgtgt-ttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgt 517  Q
    || |||||||||| |||||||||||| ||||||| |||| | ||||||||||| |||| ||||||| | |   |||||| || ||||||||| |||||||    
T  43397267 ttttcttttgtgttttttcgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggc---gtttgatttcgcgtcttgtcgcggtgt 43397171  T
Q  518 ttgtttggttcatattgaaagatc 541  Q
    | ||||  ||||||||||||||||    
T  43397170 tcgtttatttcatattgaaagatc 43397147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 383 - 559
Target Start/End: Complemental strand, 23933804 - 23933629
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgt 482  Q
    ||||||||||||||||| || |||||||||||| | || |||| ||| |||||||||||||| |||| |||| ||||| ||||||||   ||  ||||||    
T  23933804 tcaatctaaataagtgactttcacatatatcaatttttttcttgtgt-tttttcgtgattttttcgtttgagcgcgacattgtgttggttgttgtcttgt 23933706  T
Q  483 gcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    |||  ||||||||||||||| ||||||||||||||| ||||||||| ||||||||| ||| ||| ||||||||||||    
T  23933705 gcggtgttgtttgaatttgcatcttgttgcggtgttcgtttggttcttattgaaagttcaacttcagtcaatcacag 23933629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 431 - 559
Target Start/End: Original strand, 10929626 - 10929755
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaattt-gcgtcttgttgcggtgtttgtttggttca 529  Q
    ||||||||||||| ||||||||||||||  |||||||||| |||| |||||| |||||||||||  |||| |||||||||||||||||| ||||||||||    
T  10929626 tttttcgtgatttcgtcgtctgagtgcggtgttgtgttgttcgtcgtcttgtacgacgttgttttgatttagcgtcttgttgcggtgttcgtttggttca 10929725  T
Q  530 tattgaaagatcagctttagtcaatcacag 559  Q
    | |||||| |||||||| ||||||||||||    
T  10929726 tgttgaaaaatcagcttcagtcaatcacag 10929755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 388 - 559
Target Start/End: Complemental strand, 12554359 - 12554191
Alignment:
Q  388 ctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgac 487  Q
    ||||||||| | ||| |||| ||||||||| ||   |||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  12554359 ctaaataagaggttttcacacatatcaagtttttaattttgtgttttttgtgattttgtcgtctgagtgcggcgttgtgttgtccgtcaccttgtgcgac 12554260  T
Q  488 gttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
        ||| | |||| |||| ||||||||||| ||||| |||||||||||| |||| ||| ||||||| ||||    
T  12554259 ---atttaattttgtgtctagttgcggtgttcgtttgattcatattgaaatatcaacttcagtcaattacag 12554191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 259 - 541
Target Start/End: Original strand, 4098890 - 4099175
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||||||||||||| |||||| |||||||||| | |||  |||||||||||||   |  |  |||| |||||| ||||||||||||| |||| |||||||    
T  4098890 ctagttttttagtgggagaaactccaacttctctctaaactttctttctctttccttcatcgaggaagggtggctttaggtcattttttgacctagaatc 4098989  T
Q  358 a----tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctg 452  Q
    |    ||| |||  ||||||   |||||| |||||||||||||||| ||| ||||| |||||||| ||  ||||||||||||| || |||| |||||||     
T  4098990 acccatctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttgtaatttcgtcgtcta 4099089  T
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| ||||||||||| |||  ||||||||| |   |||||| ||||||| |||| | ||||||||||  |||| ||||||||||||    
T  4099090 agtgcggcgttgtgttgttcgttgtcttgtgcggc---gtttgattttgcgttttgtcgtggtgtttgttcagttcctattgaaagatc 4099175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 431 - 551
Target Start/End: Complemental strand, 34128822 - 34128702
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcat 530  Q
    |||||||| |||| ||||||||||||||  ||| |||||| |||| |||||||||||||||||||| | |||||||||||| |||||||||||||||| |    
T  34128822 tttttcgttatttcgtcgtctgagtgcggtgttatgttgttcgtcgtcttgtgcgacgttgtttgattgtgcgtcttgttgtggtgtttgtttggttcct 34128723  T
Q  531 attgaaagatcagctttagtc 551  Q
    ||| |||||||  ||||||||    
T  34128722 attaaaagatcgactttagtc 34128702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 317 - 556
Target Start/End: Original strand, 6436454 - 6436694
Alignment:
Q  317 ttaaggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatat 412  Q
    |||| |||||||| |||||||||||||| |||| ||||||||    ||||||   |||| ||  ||||| || ||||||||||||||||| |||| ||||    
T  6436454 ttaaagaggggtgattttaggtcattttttgacatagaatcacccctctgcacatttttcctcatttctttcgatctaaataagtgattttcacacatat 6436553  T
Q  413 caagtgttctcttttg-tgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttg 511  Q
     |||| || ||||||  | |||||||||||||  | ||||||||| |  ||||||| || |||| ||||||||||||||   ||| ||||| |||||||     
T  6436554 aaagttttttctttttatctttttcgtgatttcatggtctgagtgtggtgttgtgt-gttcgtcgtcttgtgcgacgtt---tgattttgcatcttgtta 6436649  T
Q  512 cggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    ||||||| || ||||||||| |||||||||||||| |||||||||    
T  6436650 cggtgttcgtctggttcataatgaaagatcagcttcagtcaatca 6436694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 320 - 558
Target Start/End: Original strand, 3308788 - 3309034
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatcatc----tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaa 415  Q
    |||||||||| |||||||||| ||| |||| |||||||| |    |||||  ||||||   ||| | |||||||||||||||||||| |||||| |||||    
T  3308788 aggaggggtgattttaggtcaatttttgacctagaatcacccctttgcatcttttttcccctttatttcaatctaaataagtgattttcacatacatcaa 3308887  T
Q  416 gtgttctcttttgtgtttt-tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtc--ttgt--t 510  Q
    || || ||||| ||||||| ||||||||| ||||||| |||||||||||||||| |  ||| ||||||||| |||||||||| || || ||  ||||  |    
T  3308888 gtttt-tctttcgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttatttgtcgtcttgtgcggcgttgtttgatttagcatcctttgttgt 3308986  T
Q  511 gcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||||||| ||||||||  |||||||| |||| ||| || ||||||||    
T  3308987 gcggtgttcgtttggtttgtattgaaatatcaacttcagacaatcaca 3309034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 389 - 559
Target Start/End: Original strand, 4264395 - 4264562
Alignment:
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacg 488  Q
    |||||||||| ||| |||||||||||||| ||   |||||||||||| ||||||| |||||| ||||| || |||| ||||| |||| |||||||   ||    
T  4264395 taaataagtggttttcacatatatcaagtttttcattttgtgttttttgtgatttcgtcgtcggagtgagatgttgcgttgttcgtcgtcttgtg---cg 4264491  T
Q  489 ttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
     ||||||| || ||||||| ||||||||||  |||||||| ||||||||||||| ||| ||||||| ||||    
T  4264492 gtgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaaagatcaacttcagtcaattacag 4264562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 376 - 541
Target Start/End: Original strand, 38445076 - 38445238
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| ||||| |||||||||| ||| ||||| |||||||| || |||||||||||||| ||||||| ||||||| |||||  ||||||||||| ||||    
T  38445076 ttttctttcaatataaataagtggttttcacatctatcaagttttttcttttgtgttttttgtgatttcgtcgtctaagtgcagcgttgtgttgttcgtc 38445175  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||||| |   |||||| || |||| || | ||||||||||||  |||| ||||||||||||    
T  38445176 gtcttgtgcggc---gtttgatttcgcgttttatcgcggtgtttgttcagttcctattgaaagatc 38445238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 320 - 490
Target Start/End: Complemental strand, 9169507 - 9169334
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattcttttt-ctgttttctatcaatctaaataagtgatttccacatatatca 414  Q
    ||||||||||||||||||||||||| |||| ||||||||    ||| |||| ||||| |  |||||| |||||||||||||||| ||| ||||| |||||    
T  9169507 aggaggggtggttttaggtcatttt-tgacctagaatcacccctctacatttttttttcccttttctttcaatctaaataagtggttttcacatctatca 9169409  T
Q  415 agtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgtt 490  Q
    ||| ||  ||||||||||||| ||||||| ||||||| |||||| ||||||||||| |||  ||||||||| ||||    
T  9169408 agtttttccttttgtgttttt-gtgatttcgtcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcgtcgtt 9169334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 259 - 539
Target Start/End: Complemental strand, 11985542 - 11985260
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||||||| || ||||||||| |||||||||| | |||  ||||||||||||| | |  |  ||||| |||||||||| |||||||| | || |||||||    
T  11985542 ctagttttctaatgagagaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggtggttttaagtcattttttaacctagaatc 11985443  T
Q  358 a----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctga 453  Q
    |    ||| ||   |||| |  |||||| ||||| |||||||||| ||| |||||||||||||| || |||||||||| ||| ||||||| ||||||| |    
T  11985442 acccctctacaactttttccccttttctttcaatttaaataagtggttttcacatatatcaagttttttcttttgtgtgttttgtgatttcgtcgtctaa 11985343  T
Q  454 gtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaaga 539  Q
    ||||| | |||||||||  ||  ||||||||| |   |||||| |||||||||||| ||||||||  ||| |||| ||||||||||    
T  11985342 gtgcggctttgtgttgtttgttgtcttgtgcggc---gtttgattttgcgtcttgtcgcggtgttcatttagttcctattgaaaga 11985260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 320 - 541
Target Start/End: Complemental strand, 36943374 - 36943149
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttc-tgttttctatcaatctaaataagtgatttccacatatatca 414  Q
    ||||||||||||||||||||||||| |||| ||||||||    ||| |||  |||||| | |||||| |||||||||||||||  ||| ||||| |||||    
T  36943374 aggaggggtggttttaggtcattttttgacctagaatcaccactctacatcttttttcctcttttctttcaatctaaataagtagttttcacatctatca 36943275  T
Q  415 agtgttctcttt--tgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgc 512  Q
    ||| || | |||  | | ||||| ||||||| ||||||| |||||| ||||||||||| |||| ||||||||| |   |||||| || |||| |||| ||    
T  36943274 agttttttttttgtttttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtattgtcgc 36943178  T
Q  513 ggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||||||| ||||  |||||||||||    
T  36943177 ggtgtttgtttagttccaattgaaagatc 36943149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 377 - 540
Target Start/End: Complemental strand, 4041783 - 4041623
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtca 476  Q
    ||||| |||||||||||||||| ||| ||||| |||||||| ||  ||||||||||||| ||||||| ||| ||| |||||| ||||||||||| ||||     
T  4041783 tttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttgtgatttcgtcttctaagtgcgtcgttgtgttgttcgtcg 4041684  T
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    ||||||   |||  |||||| ||||| ||||||   |||||||||| ||||| |||||||||||    
T  4041683 tcttgt---acggcgtttgattttgcatcttgtcatggtgtttgttcggttcctattgaaagat 4041623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 320 - 490
Target Start/End: Original strand, 7448097 - 7448271
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaa 415  Q
    ||||||||||||||||||||||||| || | ||||||||    ||| |||  |||| |  |||||| ||||||||||||| || ||| ||||| ||||||    
T  7448097 aggaggggtggttttaggtcattttttgtcctagaatcacccctctacatctttttccccttttctttcaatctaaataaatggttttcacatctatcaa 7448196  T
Q  416 gtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgtt 490  Q
    || ||  ||||||||||||| ||||||| || |||| |||||| ||||||||||| |||| ||||||||| ||||    
T  7448197 gtttttccttttgtgttttttgtgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 7448271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 559
Target Start/End: Original strand, 37416660 - 37416800
Alignment:
Q  419 ttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtt 518  Q
    |||| ||||||||||||||||||| |||||||| |||||   |||||||||| |||| |||||||||||||||||||| ||  | ||||||||   ||||    
T  37416660 ttcttttttgtgtttttcgtgattctgtcgtctaagtgccgtgttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcacatcttgttgtaatgtt 37416759  T
Q  519 tgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
     | |||||||||||||||| |||| ||  ||||||||||||    
T  37416760 cggttggttcatattgaaatatcaactcgagtcaatcacag 37416800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 250 - 484
Target Start/End: Original strand, 4778531 - 4778771
Alignment:
Q  250 tagccgactctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctga 348  Q
    |||||| | |||||||||||||| |||||| |||||||||||| |||  |||||||||| ||   |  |  ||||||||||||||||||||||||| |||    
T  4778531 tagccggccctagttttttagtgggagaaactccaacttctttctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttga 4778630  T
Q  349 cttagaatca----tctgcat-tctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattt 443  Q
    | ||||||||    ||| ||| | ||||||  |||||| ||||| |||||||||| ||| ||||| |||||||| ||  | |||||||||||  ||||||    
T  4778631 cctagaatcacccctctacatctttttttcccttttctttcaatttaaataagtggttttcacatctatcaagtttttccctttgtgttttttttgattt 4778730  T
Q  444 tgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgc 484  Q
     ||||| | |||||| ||||||||| | |||| ||||||||    
T  4778731 cgtcgtttaagtgcggcgttgtgttattcgtcgtcttgtgc 4778771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 5428056 - 5427896
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||  |||| |||| |||||||| || |||||||||||||| ||||||| ||||||  |||||| |||| |||||| ||||    
T  5428056 ttttctttcaatctaaataagttttttc-acatctatcaagttttttcttttgtgttttt-gtgatttcgtcgtccaagtgcggcgttttgttgttcgtc 5427959  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||| | ||||   ||| || ||||||||| ||||||||||||| |||||||||| ||||||    
T  5427958 gtcttgtgtggcgtt---tgatttcgcgtcttgtcgcggtgtttgtttagttcatattggaagatc 5427896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 448 - 559
Target Start/End: Complemental strand, 17249267 - 17249157
Alignment:
Q  448 gtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagcttt 547  Q
    |||| |||||||| ||||||||| |||| ||||||||| ||| |||| | || || ||||||||||||||||| |||||||||||||||||||||| ||     
T  17249267 gtctaagtgcgaccttgtgttgttcgtcgtcttgtgcggcgtagttttatttggcatcttgttgcggtgtttg-ttggttcatattgaaagatcagtttc 17249169  T
Q  548 agtcaatcacag 559  Q
    ||||||||||||    
T  17249168 agtcaatcacag 17249157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 320 - 541
Target Start/End: Original strand, 18763317 - 18763540
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaa 415  Q
    ||||| |||||||||| |||||||| |||| ||||||||    ||| |||  ||||||  |||||| |||||||||||||||| ||| |||||  |||||    
T  18763317 aggagaggtggttttatgtcattttttgacctagaatcacccctctacatcttttttcccttttctttcaatctaaataagtggttttcacat-gatcaa 18763415  T
Q  416 gtgttctcttttgtg--tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcg 513  Q
    || ||||||||||||  ||||| |||||||  |||||| ||||||  |||||||||| |||| ||||||||| |   |||||| || ||||||| |  ||    
T  18763416 gttttctcttttgtgttttttttgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttatcacg 18763512  T
Q  514 gtgtttgtttggttcatattgaaagatc 541  Q
    ||||| |||| |||| ||||||||||||    
T  18763513 gtgttcgtttagttcctattgaaagatc 18763540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 376 - 541
Target Start/End: Original strand, 31788366 - 31788528
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaag-tgttctcttttgtg-tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccg 473  Q
    |||||| |||||||||||||||||||| ||||| ||||||| ||||| |||||||| ||||| || |||| ||||||| ||||||||||| |||||| ||    
T  31788366 ttttctttcaatctaaataagtgattttcacatctatcaagttgttc-cttttgtgtttttttgtaatttcgtcgtctaagtgcgacgttttgttgttcg 31788464  T
Q  474 tcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |  ||||||||| |   ||||| |||||| |||||| ||||||||||||  |||| ||||||||||||    
T  31788465 ttgtcttgtgcggc---gtttg-atttgcatcttgtcgcggtgtttgttcagttcctattgaaagatc 31788528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 325 - 485
Target Start/End: Complemental strand, 19062597 - 19062433
Alignment:
Q  325 gggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgtt 420  Q
    |||||||||||||| ||||| |||  ||||||||    ||| ||| |||||||  |||||| |||||||||||||||| ||| ||||| |||||||| ||    
T  19062597 gggtggttttaggttattttttgaactagaatcacccctctacatcctttttcccttttctttcaatctaaataagtggttttcacatctatcaagtttt 19062498  T
Q  421 ctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcg 485  Q
      ||||| ||||||| ||||| | ||||||| |||||  ||||||||||| |||| |||||||||    
T  19062497 tccttttatgttttttgtgatatcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcg 19062433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 291 - 558
Target Start/End: Complemental strand, 10237492 - 10237227
Alignment:
Q  291 tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaa 386  Q
    ||||||||||||| |||||| |||  |  || || |||| |||||||||| ||| |||| ||||||||    ||| |||  ||||||   ||||| ||||    
T  10237492 tttaagttttcttcctctttcactcatcgagtagaggtgattttaggtcaatttttgacctagaatcacccctctacatcttttttcccctttctttcaa 10237393  T
Q  387 tctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcga 486  Q
    |||||||||||||||| |||||| ||||||| ||          | ||||||||||| ||||||| |||||||||||||||||| |||| ||||||||      
T  10237392 tctaaataagtgattttcacatacatcaagtttt----------tctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcag 10237303  T
Q  487 cgttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||| ||||| || || |||| |    ||| ||||| ||||||||| ||||||||||||||||| || ||||||||    
T  10237302 cgttctttgatttcgcatcttttgttgtgcagtgttcgtttggttcgtattgaaagatcagcttcagacaatcaca 10237227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 376 - 469
Target Start/End: Complemental strand, 29279760 - 29279667
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttg 469  Q
    |||||| |||||||||||||||| ||| |||||||||||||| ||  ||||||||||||| ||||||| ||||||| | |||| ||||||||||    
T  29279760 ttttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgttttttgtgatttcgtcgtctaattgcggcgttgtgttg 29279667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 320 - 490
Target Start/End: Original strand, 7646321 - 7646497
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattcttttt--ctgttttctatcaatctaaataagtgatttccacatatatc 413  Q
    ||||||||||||||||||||||||| |||| ||||||||    ||| |||  |||||  |  |||||| || ||||||||||||| ||| ||||| || |    
T  7646321 aggaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttttccccttttctttcgatctaaataagtggttttcacatctacc 7646420  T
Q  414 aagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgtt 490  Q
    |||| ||  ||||||||||||  ||||||| ||||||| |||||| |||| |||||| |||| ||||||||| ||||    
T  7646421 aagtttttccttttgtgttttctgtgatttcgtcgtctaagtgcggcgttatgttgttcgtcgtcttgtgcggcgtt 7646497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 7678061 - 7677901
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||||| |||  ||| ||  |||||| |||||| ||||||| ||||||| |||||| ||||||||||| ||||    
T  7678061 ttttctttcaatctaaataagtggttttcacatctat--agtttttccttttgagttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtc 7677964  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||||| |   |||||| || ||||||| |  |||||||||||  |||| ||||||||||||    
T  7677963 gtcttgtgcggc---gtttgatttcgcgtcttatctcggtgtttgttcagttcctattgaaagatc 7677901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 368 - 559
Target Start/End: Original strand, 14423224 - 14423415
Alignment:
Q  368 tttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtg 466  Q
    |||||||  ||||| ||||||||||||||||  ||||||||||||||||| || |||| ||| ||||| | |||||| ||| ||| | || |||  | ||    
T  14423224 tttttctcatttctttcaatctaaataagtgggttccacatatatcaagtttt-tcttgtgttttttttcttgatttcgtcatcttaatgtgacaatatg 14423322  T
Q  467 ttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    || | |||| ||||||||  |||||||||| ||  | | || |||||||||||||||||||| ||||||||||||  ||||||||||| ||||    
T  14423323 ttattcgtcgtcttgtgcatcgttgtttgatttcacattttattgcggtgtttgtttggttcttattgaaagatcgactttagtcaattacag 14423415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 320 - 485
Target Start/End: Complemental strand, 27097655 - 27097487
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca---tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaa 415  Q
    |||||||||| |||||||||||||| |||| ||||||||   ||| |||  ||||||   |||||| |  |||||||||||||||||| |||  ||||||    
T  27097655 aggaggggtgattttaggtcattttttgacctagaatcaccctctacatcttttttccccttttcttttgatctaaataagtgatttc-acaactatcaa 27097557  T
Q  416 gtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcg 485  Q
    || ||  |||||||||||||  |||||| ||||||| |||||| ||||||||||| |||| |||||||||    
T  27097556 gtttttccttttgtgttttttctgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcg 27097487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 376 - 470
Target Start/End: Original strand, 36691784 - 36691878
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctgagtgcgacgttgtgttgt 470  Q
    |||||| |||||||||||||||| |||| ||||||||||||| || ||||||||| ||||||||||||| ||||||| |||||| |||| ||||||    
T  36691784 ttttctttcaatctaaataagtggtttc-acatatatcaagttttttcttttgtgttttttcgtgatttcgtcgtctaagtgcggcgttttgttgt 36691878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 434 - 541
Target Start/End: Complemental strand, 459376 - 459269
Alignment:
Q  434 ttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatatt 533  Q
    |||||||||| ||| ||||||||    | |||| ||| |||| |||||| ||||||||||||| ||| |||||||||||||||||  |||| ||||||||    
T  459376 ttcgtgatttcgtcatctgagtgtcgtggtgtgctgttcgtcgtcttgtacgacgttgtttgattttccgtcttgttgcggtgttcatttgattcatatt 459277  T
Q  534 gaaagatc 541  Q
    ||||||||    
T  459276 gaaagatc 459269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 392 - 541
Target Start/End: Complemental strand, 31210781 - 31210635
Alignment:
Q  392 ataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttg 491  Q
    ||||||| ||| ||||| |||||||| || ||||||||||||||  |||||| ||||||| |||||| |||||||||||  ||  ||||||||| |   |    
T  31210781 ataagtggttttcacatctatcaagttttttcttttgtgttttttatgatttcgtcgtctaagtgcggcgttgtgttgtttgttgtcttgtgcggc---g 31210685  T
Q  492 tttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||| || ||||||| | | ||||||||||  |||| ||||||||||||    
T  31210684 tttgatttcgcgtcttatcgtggtgtttgttcagttcctattgaaagatc 31210635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 481 - 551
Target Start/End: Original strand, 11812695 - 11812765
Alignment:
Q  481 gtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtc 551  Q
    |||||||||||||||| |||| ||||||||||||||||| |||| ||| ||| ||||||||||||| ||||    
T  11812695 gtgcgacgttgtttgattttgtgtcttgttgcggtgtttatttgattcctatagaaagatcagcttcagtc 11812765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 376 - 470
Target Start/End: Complemental strand, 29173909 - 29173815
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgt 470  Q
    |||||| |||||| ||||||||| ||| ||||||| ||| || ||  ||||||||||||| ||||||| ||||||| |||||| |||||||||||    
T  29173909 ttttctttcaatccaaataagtggttttcacatatttcaggtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgt 29173815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 262 - 359
Target Start/End: Complemental strand, 28718255 - 28718159
Alignment:
Q  262 gttttttagtgagagaaattccaacttcttttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatcat 359  Q
    |||||| ||||||||||| |||||||   |||||||||||||| ||||| |||  || || |||||||||||||||||||||| |||| |||||||||    
T  28718255 gtttttaagtgagagaaactccaactctctttaagttttctttatctttaactcattgagaaggggtggttttaggtcatttt-tgacatagaatcat 28718159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 463 - 540
Target Start/End: Complemental strand, 37614198 - 37614121
Alignment:
Q  463 tgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    |||||||| | || ||||||||| |||||||||| ||| |||||||||||||||||  |||| |||||||||||||||    
T  37614198 tgtgttgttcttcgtcttgtgcgtcgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagat 37614121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 325 - 554
Target Start/End: Original strand, 1415419 - 1415642
Alignment:
Q  325 gggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgtt 420  Q
    |||||||||||||| ||||| |||  ||||||||    ||| |||  ||||||  |||||| ||||| |||||||||||||| |||| ||||||||        
T  1415419 gggtggttttaggttattttttgatctagaatcacccctctacatcttttttcccttttctttcaatttaaataagtgattttcacacatatcaaga--- 1415515  T
Q  421 ctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttg 520  Q
        ||| | ||||| ||||||| ||||||| ||| |||||||||||||| | || ||||||||| |   |||||| || |||| |||| ||||||||||    
T  1415516 ----ttttttttttttgtgatttcgtcgtctaagtacgacgttgtgttgttcttcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttg 1415608  T
Q  521 tttggttcatattgaaagatcagctttagtcaat 554  Q
    |||  ||| |||||||||||| || | |||||||    
T  1415609 tttatttcctattgaaagatcggcatcagtcaat 1415642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 376 - 521
Target Start/End: Original strand, 1421585 - 1421728
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgt-tctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    |||||| |||||||||||||||| ||| ||||| |||||| | | | | |||||||||||| ||||||| ||||||| ||||||  ||| |||||| |||    
T  1421585 ttttctttcaatctaaataagtggttttcacatctatcaattttattttttttgtgttttttgtgatttcgtcgtctaagtgcggtgttatgttgttcgt 1421684  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgt 521  Q
    | ||||||||  |   |||||| || ||||||||| |||||||||||    
T  1421685 cgtcttgtgcagc---gtttgatttcgcgtcttgtcgcggtgtttgt 1421728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 425 - 559
Target Start/End: Complemental strand, 28534099 - 28533964
Alignment:
Q  425 tttgtgtttttcgtgattttgt-cgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgttt 523  Q
    ||||||||||||||||||| || | || || |||  | ||||||||| || | |||||||||||||||||||| ||    ||||||||||||||| ||||    
T  28534099 tttgtgtttttcgtgatttcgttcatccgaatgctgcattgtgttgttcgccgtcttgtgcgacgttgtttgatttcaaatcttgttgcggtgttcgttt 28534000  T
Q  524 ggttcatattgaaagatcagctttagtcaatcacag 559  Q
    | ||| ||||||||||  ||||| | ||||||||||    
T  28533999 gattcctattgaaagacaagcttcactcaatcacag 28533964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 376 - 483
Target Start/End: Complemental strand, 31128969 - 31128863
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| |||||||||||||| ||  ||||||||||||| ||||||| ||| | | | |||| |||||||||||  |||    
T  31128969 ttttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgttttt-gtgatttcgtcatttaattgcggcgttgtgttgttagtc 31128871  T
Q  476 atcttgtg 483  Q
     |||||||    
T  31128870 gtcttgtg 31128863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 385 - 542
Target Start/End: Original strand, 35220245 - 35220398
Alignment:
Q  385 aatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgc 484  Q
    |||||||||||||| ||| |||||| ||||||| || | | |||||||||| ||||||| ||||||| |||||| | || |||||| | || ||||||||    
T  35220245 aatctaaataagtggttttcacataaatcaagt-ttttttcttgtgttttttgtgatttcgtcgtctaagtgcggcattatgttgttcatcgtcttgtgc 35220343  T
Q  485 gacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    | |   |||||| ||||||| ||||  |||||||  ||| |||| |||||||||||||    
T  35220344 ggc---gtttgattttgcgttttgtcacggtgttcatttagttcctattgaaagatca 35220398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 498 - 556
Target Start/End: Complemental strand, 19595974 - 19595916
Alignment:
Q  498 tttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    |||| ||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||    
T  19595974 tttgtgtcttgttgcgatgtttgtttagttcttattgaaagatcagctttaatcaatca 19595916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 9986413 - 9986337
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||| ||||||  |||||||||  |||| ||||||||||||||||    
T  9986413 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9986337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 293 - 540
Target Start/End: Complemental strand, 18108013 - 18107776
Alignment:
Q  293 taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatc 388  Q
    |||||||||||||||||| | |  || ||||  ||||||||||||||||||| |||| ||||||||    | |||| |||||| |   ||||| ||||      
T  18108013 taagttttctttctctttcattcattgaggaatggtggttttaggtcattttttgacctagaatcacctctttgca-tcttttacccctttctttcaaat 18107915  T
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacg 488  Q
    |||||||||| ||| |||| ||||||| | |||    |||||||||| ||||||| |||||||||||||       |||||| |||| ||||||||| |     
T  18107914 taaataagtggttttcacacatatcaatttttc---attgtgttttttgtgatttcgtcgtctgagtgc-------tgttgttcgtcgtcttgtgcggc- 18107826  T
Q  489 ttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
      |||||| || ||||| || ||||||||| |||||||||||||||| ||||    
T  18107825 --gtttgatttcgcgtcatgctgcggtgttcgtttggttcatattgagagat 18107776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 431 - 511
Target Start/End: Complemental strand, 20145865 - 20145786
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttg 511  Q
    |||||| ||||||| ||||||||||| | |||||||||||  ||  ||||||||| |||||||| ||||||||||||||||    
T  20145865 tttttcatgattttatcgtctgagtgtggcgttgtgttgttggttgtcttgtgcggcgttgttt-aatttgcgtcttgttg 20145786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 491 - 559
Target Start/End: Complemental strand, 28871866 - 28871798
Alignment:
Q  491 gtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    |||||| || ||||||||| |||||||| ||||||||| ||||||||||||| ||| ||||||| ||||    
T  28871866 gtttgatttcgcgtcttgtcgcggtgttcgtttggttcctattgaaagatcaacttcagtcaattacag 28871798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 495
Target Start/End: Original strand, 13268667 - 13268730
Alignment:
Q  433 tttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatc-ttgtgcgacgttgtttg 495  Q
    ||||||| ||||||||||| ||||||||||||| |||| |||| || |||||||||||||||||    
T  13268667 tttcgtggttttgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttg 13268730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 495
Target Start/End: Complemental strand, 19581021 - 19580958
Alignment:
Q  433 tttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatc-ttgtgcgacgttgtttg 495  Q
    ||||||||||||||||||| |||||||| |||| |||| |||| || |||||||||||||||||    
T  19581021 tttcgtgattttgtcgtcttagtgcgacattgttttgttcgtcgtctttgtgcgacgttgtttg 19580958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 465 - 540
Target Start/End: Original strand, 30420688 - 30420763
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    |||||| |||| ||||||||| |||||||||| ||| ||||||  |||||||||  |||| |||||||||||||||    
T  30420688 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagat 30420763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 477 - 543
Target Start/End: Original strand, 18113891 - 18113957
Alignment:
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcag 543  Q
    ||||||||| |||||||||| ||| |||||| ||||||||||  | ||||||||||||||| |||||    
T  18113891 tcttgtgcggcgttgtttgattttccgtcttattgcggtgttaatatggttcatattgaaatatcag 18113957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 541
Target Start/End: Complemental strand, 42698854 - 42698729
Alignment:
Q  410 tatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgt 509  Q
    |||||||| ||  ||||||||||||  |||||||  |||||| |||||||||||||||||| |||| ||||||| | ||||   ||| ||||||||||||    
T  42698854 tatcaagtttttccttttgtgtttt--gtgatttcatcgtct-agtgcgacgttgtgttgttcgtcgtcttgtgtggcgtt---tgattttgcgtcttgt 42698761  T
Q  510 tgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||  ||||||||| |||  ||||||||||||    
T  42698760 cgcaatgtttgtttagtttctattgaaagatc 42698729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 485
Target Start/End: Original strand, 8809191 - 8809299
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||| |||||||||  || ||||||||| |||| ||  ||||||||||||| || |||| ||||||| | |||||||| |||||||  |||    
T  8809191 ttttctttcaatcaaaataagtggcttgcacatatattaagtttttccttttgtgttttt-gtaatttcgtcgtctaattgcgacgtcgtgttgttagtc 8809289  T
Q  476 atcttgtgcg 485  Q
     |||||||||    
T  8809290 gtcttgtgcg 8809299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 434
Target Start/End: Complemental strand, 19596065 - 19596008
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt 434  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||| | |||||| ||||    
T  19596065 tttctttcaatgtaaataagtgattttcacatatatcaagtgttttattttgtatttt 19596008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 537
Target Start/End: Complemental strand, 7015782 - 7015710
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
    |||||| |||| ||||||||| |||||||||| ||| ||||||  |||||||||  |||| ||||||||||||    
T  7015782 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaa 7015710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 8805876 - 8805952
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| |||||||||||||||||||| ||  ||||||  || ||||||  |||| ||||||||||||||||    
T  8805876 tgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgtggtgttcatttgattcatattgaaagatc 8805952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 539
Target Start/End: Complemental strand, 9374629 - 9374553
Alignment:
Q  463 tgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaaga 539  Q
    |||||||| |||||||||||||| | |||||||  ||| |||||||||| ||||||  |||| ||||| ||||||||    
T  9374629 tgtgttgttcgtcatcttgtgcgtcattgtttgtttttccgtcttgttgtggtgttcatttgattcattttgaaaga 9374553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 428 - 496
Target Start/End: Original strand, 14416130 - 14416198
Alignment:
Q  428 gtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttga 496  Q
    |||||||| ||||||||||||| ||| |||| |||||| |||| |||| ||||||| | ||||||||||    
T  14416130 gtgttttttgtgattttgtcgtttgaatgcggcgttgtattgttcgtcgtcttgtgtggcgttgtttga 14416198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 27249222 - 27249146
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  27249222 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 27249146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 33760260 - 33760208
Alignment:
Q  502 cgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
    ||||||||||| ||||| ||||| ||||||||||||||||| ||| |||||||    
T  33760260 cgtcttgttgcagtgttcgtttgattcatattgaaagatcaacttcagtcaat 33760208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 495
Target Start/End: Complemental strand, 7443585 - 7443522
Alignment:
Q  433 tttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatc-ttgtgcgacgttgtttg 495  Q
    ||||||||||| | ||||| ||||||||||||| |||| |||| || |||||||||||||||||    
T  7443585 tttcgtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttg 7443522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 559
Target Start/End: Complemental strand, 12647158 - 12647119
Alignment:
Q  520 gtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  12647158 gttttgttcatattgaaagatcagcttcagtcaatcacag 12647119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 463
Target Start/End: Complemental strand, 28871951 - 28871864
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgtt 463  Q
    ||||| ||||| |||||||||||||| |||| ||||||||| ||   ||||||||||||  ||||||| || ||||||||||| ||||    
T  28871951 tttctttcaatttaaataagtgattttcacacatatcaagtttttcattttgtgtttttatgtgatttcgttgtctgagtgcggcgtt 28871864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 37826490 - 37826541
Alignment:
Q  46 gataaaacacaatcttgccattgaacaagatttctagttaaaacataaacat 97  Q
    ||||||||||||||||||  |||||||||||||  | |||||||||||||||    
T  37826490 gataaaacacaatcttgcatttgaacaagattttcaattaaaacataaacat 37826541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 542
Target Start/End: Complemental strand, 39641927 - 39641852
Alignment:
Q  467 ttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    |||| |||||||||||||| | |||||||| ||  |||||||||||||| ||  |||  |||||||||||||||||    
T  39641927 ttgttcgtcatcttgtgcgtcattgtttgatttcccgtcttgttgcggtattcatttaattcatattgaaagatca 39641852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 470
Target Start/End: Original strand, 16375872 - 16375951
Alignment:
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgt 470  Q
    ||||||| |||||| |||||||||||||| || ||  |||||||||| |||||||  |||||||| |||| | |||||||||    
T  16375872 taaataaatgattttcacatatatcaagttttttc--ttgtgttttttgtgatttcatcgtctgaatgcggcattgtgttgt 16375951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 467 - 541
Target Start/End: Original strand, 36234020 - 36234094
Alignment:
Q  467 ttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||| |||| ||||||||| |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  36234020 ttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 36234094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 507
Target Start/End: Original strand, 10548208 - 10548276
Alignment:
Q  438 tgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtctt 507  Q
    |||||||||||||||| || | ||||||||| |  ||| |||||||||||||||||||| ||| ||||||    
T  10548208 tgattttgtcgtctga-tgtgtcgttgtgttatttgtcgtcttgtgcgacgttgtttgatttttcgtctt 10548276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 417
Target Start/End: Complemental strand, 28227875 - 28227834
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagt 417  Q
    |||||| |||||||||||||||||||| |||| |||||||||    
T  28227875 ttttctttcaatctaaataagtgattttcacaaatatcaagt 28227834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 495
Target Start/End: Complemental strand, 31269116 - 31269051
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatc-ttgtgcgacgttgtttg 495  Q
    ||||||||||||| ||||||| |||||||| |||| |||| |||| || |||||||| ||||||||    
T  31269116 tttttcgtgatttcgtcgtcttagtgcgacattgttttgttcgtcttctttgtgcgatgttgtttg 31269051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 542
Target Start/End: Complemental strand, 36175564 - 36175523
Alignment:
Q  501 gcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    |||||||||||||||||| ||||||||  |||||||||||||    
T  36175564 gcgtcttgttgcggtgttcgtttggtttctattgaaagatca 36175523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 2808543 - 2808467
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||| ||| || ||||| ||||  | || ||||||||||||||||    
T  2808543 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttgcgatgttcatctgattcatattgaaagatc 2808467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 3269182 - 3269106
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| | ||||| | |||||||||| ||| ||||||  |||||||||  |||| ||||||||||||||||    
T  3269182 tgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 3269106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 3269741 - 3269665
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| | ||||| | |||||||||| ||| ||||||  |||||||||  |||| ||||||||||||||||    
T  3269741 tgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 3269665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 3270300 - 3270224
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| | ||||| | |||||||||| ||| ||||||  |||||||||  |||| ||||||||||||||||    
T  3270300 tgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 3270224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 344
Target Start/End: Complemental strand, 6359189 - 6359109
Alignment:
Q  265 ttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcatttt 344  Q
    ||||||||||||||||| || ||||||| ||||||  |||||||||| |||  |  ||| | |||||||||||||||||||    
T  6359189 ttttagtgagagaaatttcaccttctttctaagttcgctttctctttcactcatcgaggtgaggtggttttaggtcatttt 6359109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 322 - 358
Target Start/End: Complemental strand, 7678126 - 7678090
Alignment:
Q  322 gaggggtggttttaggtcattttctgacttagaatca 358  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  7678126 gaggggtggttttaggtcattttttgacctagaatca 7678090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 440 - 480
Target Start/End: Complemental strand, 17074924 - 17074884
Alignment:
Q  440 attttgtcgtctgagtgcgacgttgtgttgtccgtcatctt 480  Q
    |||||||||||| ||||||||||||| ||||||||| ||||    
T  17074924 attttgtcgtcttagtgcgacgttgttttgtccgtcgtctt 17074884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 20146016 - 20145916
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttct-tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    ||||||||||||||||||||| | ||  |||| |||||||| |||||||  || |||  | |||||||||  ||||||||||||||  |||| |||||||    
T  20146016 ctagttttttagtgagagaaacttcacattctctttaagttatctttcttcttcactcatcaaggaggggcagttttaggtcatttattgacatagaatc 20145917  T
Q  358 a 358  Q
    |    
T  20145916 a 20145916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 536
Target Start/End: Complemental strand, 32092422 - 32092350
Alignment:
Q  464 gtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaa 536  Q
    ||||||| ||| |||||||||| || ||||| | || ||||||||  ||| |||||||||| |||||||||||    
T  32092422 gtgttgttcgttatcttgtgcgccgatgttttatttagcgtcttgccgcgatgtttgtttgtttcatattgaa 32092350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 541
Target Start/End: Original strand, 34599009 - 34599073
Alignment:
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||||| |||||||||| ||| | ||||  |||||||||  |||| ||||||||||||||||    
T  34599009 tcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatc 34599073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 1e-70; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 259 - 559
Target Start/End: Original strand, 22300642 - 22300949
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||||||||||| |||||||| |||||||||| | ||| |||| ||||||||| ||| ||  |||||| |||||||||||||||||| |||| || ||||    
T  22300642 ctagttttttagagagagaaactccaacttctctctaaattttatttctctttcactcgtcgaggaggagtggttttaggtcattttttgacctaaaatc 22300741  T
Q  358 atc----tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg--tttttcgtgattttgtcgtct 451  Q
    | |    ||||| |||||||| |||||| ||||| |||||||||||||| ||| ||||||||||| | ||||||||   ||||||||||||| |||||||    
T  22300742 acccctttgcatcctttttctcttttctttcaatttaaataagtgattttcacgtatatcaagtgctttcttttgtacttttttcgtgatttcgtcgtct 22300841  T
Q  452 gagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtc 551  Q
    | ||||||||||||||||| |||| ||||||||| |||||||||| || ||||| ||||||||||||||||| | |||| ||||||||||||||||||||    
T  22300842 gtgtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtcctgttgcggtgtttgtttagctcatcttgaaagatcagctttagtc 22300941  T
Q  552 aatcacag 559  Q
    ||||||||    
T  22300942 aatcacag 22300949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 259 - 558
Target Start/End: Complemental strand, 51888528 - 51888221
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    ||||||||||| ||||||||| | |||||| | | || ||||||||||||||| |||  |  ||||||||||||||||||||||||| |||| | |||||    
T  51888528 ctagttttttattgagagaaacttcaacttttctctacgttttctttctctttcactcatcgaggaggggtggttttaggtcattttttgacattgaatc 51888429  T
Q  358 a----tctgcattctttt-tctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt---cgtgattttgtcgt 449  Q
    |    ||| || |||||| ||   |||||  | ||||||| ||||||||| ||||||||||||||||| ||||||||||||||   |||||||| || ||    
T  51888428 acccctct-caatcttttatcccctttcttccgatctaaacaagtgattttcacatatatcaagtgttttcttttgtgttttttttcgtgatttcgttgt 51888330  T
Q  450 ctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttag 549  Q
    ||||||||| ||||||||||| | || |||| ||||||||||||||| || || ||||||||||||||| ||||||||||||||||||||||| ||| |     
T  51888329 ctgagtgcggcgttgtgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggttcatattgaaagatcaacttcaa 51888230  T
Q  550 tcaatcaca 558  Q
    |||||||||    
T  51888229 tcaatcaca 51888221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 261 - 558
Target Start/End: Original strand, 9643176 - 9643487
Alignment:
Q  261 agttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggagggg-tggttttaggtcattttctgacttagaatca 358  Q
    ||||||||||||||||||| |||||||||| | |||||||||||| |||||| ||  |  | |||||| |||||||| |||||||| |||| ||||||||    
T  9643176 agttttttagtgagagaaactccaacttctctctaagttttctttatcttttgctcatcgaagagggggtggttttatgtcattttttgacctagaatca 9643275  T
Q  359 ----tctgcat---tctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-----cgtgattttgt 446  Q
        |||||||   | ||||||   ||||| || ||||||||||||||||| ||||||||||| ||||| ||||||||||||||     ||| |||| ||    
T  9643276 ctcatctgcatctttttttttcccatttctttcgatctaaataagtgattttcacatatatcatgtgttttcttttgtgtttttgttcccgtaatttcgt 9643375  T
Q  447 cgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctt 546  Q
    |||| ||||||||||||||||||| |||| ||||| |||||||||||||| ||  | ||||||||| ||||| |||||||||||||| |||||||| |||    
T  9643376 cgtccgagtgcgacgttgtgttgttcgtcgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttcgtttggttcatattaaaagatcaactt 9643475  T
Q  547 tagtcaatcaca 558  Q
     |||||||||||    
T  9643476 cagtcaatcaca 9643487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 376 - 559
Target Start/End: Original strand, 52944231 - 52944411
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    |||||| |||||||||||||||||||| ||||||||    ||||| ||||||||| ||||||||||||| || ||||||||||| ||||||||||| |||    
T  52944231 ttttctttcaatctaaataagtgattttcacatata----gtgttttcttttgtgctttttcgtgatttcgtagtctgagtgcggcgttgtgttgttcgt 52944326  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    | | ||||||| |||||||| | ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||    
T  52944327 cgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatattgaaagatcagcttcagtcaatcacag 52944411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 259 - 541
Target Start/End: Complemental strand, 26633982 - 26633698
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    ||||||||||||||||||||| |||||||||| | |||  |||||||||  ||   |  || |||||||||||| |||||||||||| |||| |||||||    
T  26633982 ctagttttttagtgagagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggtggtcttaggtcattttttgacctagaatc 26633883  T
Q  358 atc----tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctga 453  Q
    | |    | |||  |||| || |||||| |||||||||||||||| ||| ||||| |||||||| || |||||||||||||| ||||||| ||||||| |    
T  26633882 acccctatacatctttttcctcttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttttgtgatttcgtcgtctaa 26633783  T
Q  454 gtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||| ||||||||||| |||| ||||||||| | |||   || || ||||||||| || |||||||||  |||| ||||||||||||    
T  26633782 gtgcggcgttgtgttgttcgtcgtcttgtgcggcattg---gacttcgcgtcttgtcgcagtgtttgttcagttcctattgaaagatc 26633698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 395 - 558
Target Start/End: Original strand, 28857339 - 28857501
Alignment:
Q  395 agtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgttt 494  Q
    |||||||| ||||||||||||||||| |||| ||| ||||| |||||||  |||||| |||||| ||||||||||| |||  ||||||||| ||||||||    
T  28857339 agtgattttcacatatatcaagtgttttcttgtgttttttt-gtgatttcatcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgttgttt 28857437  T
Q  495 gaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    || |  |||||| ||||||||||| ||||| ||||||||||||||||||||| |||||||||||    
T  28857438 gattccgcgtctagttgcggtgttcgtttgtttcatattgaaagatcagcttcagtcaatcaca 28857501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 259 - 541
Target Start/End: Original strand, 22610981 - 22611265
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||||||||||||| |||||| |||||||||| | |||  |||||||||| ||   | ||  ||||||||||||||||||||||||| |||| |||||||    
T  22610981 ctagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcgtcgaggaggggtggttttaggtcatttt-tgacctagaatc 22611079  T
Q  358 a----tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctg 452  Q
    |    ||| |||  ||||||   |||||| |||||||||||||||| ||| ||||| |||||||| |   ||||||||||||| ||||||| |||||||     
T  22611080 acccatctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttatccttttgtgttttttgtgatttcgtcgtcta 22611179  T
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| ||||||||||| |||| ||||||||| |   |||||| ||||||| |||| ||||||||||||  |||| ||||||||||||    
T  22611180 agtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgcgttttgtcgcggtgtttgttcagttcctattgaaagatc 22611265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 251 - 522
Target Start/End: Complemental strand, 4143074 - 4142798
Alignment:
Q  251 agccgactctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgac 349  Q
    ||||||| |||||||||||||| |||||| |||||||||| | |||  |||||||||| |||  |  |  ||||||||||||||||||||||||| ||||    
T  4143074 agccgaccctagttttttagtgggagaaactccaacttctctataaactttctttctcctttgttcatcgaggaggggtggttttaggtcattttttgac 4142975  T
Q  350 ttagaatca----tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgatttt 444  Q
     ||||||||    ||| |||  ||||||   |||||| |||||||||||||||| |||| |||| |||||||| ||  ||||||||||||| |||||||     
T  4142974 ctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtgttttc-acatctatcaagtttttccttttgtgttttttgtgatttc 4142876  T
Q  445 gtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtt 522  Q
    ||||||| |||||| ||||||||||| |||| ||||||||| ||  |||||| || | || |||| ||||||||||||    
T  4142875 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcggcgtttgatttcgtgttttgtcgcggtgtttgtt 4142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 263 - 558
Target Start/End: Complemental strand, 36204688 - 36204394
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca--- 358  Q
    |||||||||||||| || |||| ||||| | || ||||||||||||||| | |  | ||||| || ||||||||||||||||| | || ||||||||       
T  36204688 ttttttagtgagaggaactccaccttctctctaggttttctttctctttcaatcatcaaggatggatggttttaggtcatttttt-acctagaatcaccc 36204590  T
Q  359 -tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgc 457  Q
     |||||||| | ||||  |||||| || || ||||||||||||||||||||| ||||||||||   ||||   || |||||||||| ||||||| |||||    
T  36204589 ctctgcattttgtttcctttttctttcgatttaaataagtgatttccacatagatcaagtgtt---tttt---ttcttcgtgatttcgtcgtctaagtgc 36204496  T
Q  458 gacgttgtgttgtccgtcatcttgtgcga-cgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    | ||||||||||| |||| || ||| ||  |||||||||| || || | |||||||||||||  ||||||||||||||||| |||||||| |||||||||    
T  36204495 ggcgttgtgttgttcgtcgtcctgtacgggcgttgtttgatttcgcatattgttgcggtgttcatttggttcatattgaaaaatcagcttcagtcaatca 36204396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 423 - 558
Target Start/End: Complemental strand, 6155370 - 6155236
Alignment:
Q  423 cttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtt 522  Q
    ||||||||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||| |||||||||| || | || |||| || ||||| |||    
T  6155370 cttttgtgtttttcgtgatttcgtcgtctgagtgcggtgttgtgttgtc-gtcatcttgtgcgtcgttgtttgatttcgtgttttgtcgcagtgttcgtt 6155272  T
Q  523 tggttcatattgaaagatcagctttagtcaatcaca 558  Q
    || |||||||||||||||||| || |||||||||||    
T  6155271 tgattcatattgaaagatcagtttcagtcaatcaca 6155236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 376 - 541
Target Start/End: Original strand, 13634035 - 13634197
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| || |||||||||||||| ||||||| ||||||| |||||| ||||||||||| ||||    
T  13634035 ttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtc 13634134  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||||||    ||| || || ||||||||| ||||||||||||  |||| ||||||||||||    
T  13634135 gtcttgtgcga---ggttagatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatc 13634197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 320 - 558
Target Start/End: Original strand, 36161573 - 36161810
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaa 415  Q
    ||||| ||||||||||||||||||| |||| ||||||||    ||||||||  |||||   ||||| ||||||||||||||||||||  |||||||||||    
T  36161573 aggagaggtggttttaggtcattttttgacctagaatcacccatctgcatt--ttttcccatttctttcaatctaaataagtgatttttacatatatcaa 36161670  T
Q  416 gtgttctcttttgtgtttttc-gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcgg 514  Q
     | ||   ||||||||||||  |||||||  |||||||||||||  ||||| |||| |||  ||||||||| |||||||||| ||| ||| |||||||||    
T  36161671 ttttt---ttttgtgtttttttgtgatttcttcgtctgagtgcgg-gttgttttgttcgttgtcttgtgcgtcgttgtttgattttacgttttgttgcgg 36161766  T
Q  515 tgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||| |||| |||||||| ||||||| || || |||||||||||    
T  36161767 tgttcgttttgttcatatcgaaagattagtttcagtcaatcaca 36161810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 377 - 558
Target Start/End: Complemental strand, 22038989 - 22038812
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt--tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    ||||| || ||||||||||||||||| ||||| |||||||| || |||||||||||||  ||||||||||||||| ||||||     ||||||||| |||    
T  22038989 tttctttctatctaaataagtgattttcacatctatcaagttttttcttttgtgttttattcgtgattttgtcgt-tgagtg-----ttgtgttgttcgt 22038896  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    | | ||||| | |||||||||| || ||||||||||| |||| | ||||||||||||||||||||||  ||| |||||||||||    
T  22038895 ccttttgtgtggcgttgtttgatttcgcgtcttgttgtggtgctcgtttggttcatattgaaagatctacttcagtcaatcaca 22038812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 18048807 - 18048980
Alignment:
Q  378 ttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcat 477  Q
    |||| ||||| |||||||||||||||||||||     |||||| ||||||||| |||| | ||||| ||| || || ||||  ||||||||||  ||| |    
T  18048807 ttctttcaatttaaataagtgatttccacata-----agtgttttcttttgtgctttttgagatttcgtcatccgaatgcggtgttgtgttgtttgtcgt 18048901  T
Q  478 cttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    |||||| | |||||||||| |||||| |||||||||||||| ||||| ||||||||||||||| ||||| |||||||||    
T  18048902 cttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtcaatca 18048980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 250 - 558
Target Start/End: Original strand, 27651736 - 27652043
Alignment:
Q  250 tagccgactctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctga 348  Q
    |||||| | ||| ||||||||||||||||||||   ||||| | ||| ||||||| |||||| |||  |  |||||||||| | |||||||| ||| |||    
T  27651736 tagccgcccctaattttttagtgagagaaattctgtcttctctctaaattttcttcctctttcactcatcgaggaggggtgatgttaggtcaatttttga 27651835  T
Q  349 cttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgatttt 444  Q
    | ||| ||||    |||||||  ||||||   ||||| |||||||||||||||||||| |||||| ||||||| ||          | |||||||||||     
T  27651836 cctaggatcacccatctgcatcttttttcccatttctttcaatctaaataagtgattttcacatacatcaagtttt----------tctttcgtgatttc 27651925  T
Q  445 gtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtc--ttgt--tgcggtgtttgtttggttcatattgaaagat 540  Q
    ||||||| ||||| |||||||||||| |||| |||||||||  ||||||||| || || ||  ||||  ||||||||| ||||||||| |||||||||||    
T  27651926 gtcgtcttagtgcaacgttgtgttgttcgtcgtcttgtgcggtgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtattgaaagat 27652025  T
Q  541 cagctttagtcaatcaca 558  Q
    ||||||||| ||||||||    
T  27652026 cagctttagacaatcaca 27652043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 376 - 559
Target Start/End: Complemental strand, 31359942 - 31359756
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt---tcgtgattttgtcgtctgagtgcgacgttgtgttgtcc 472  Q
    |||||| ||||||||||||| | |||||||||| |||||||| || |||| ||| ||||   |||  |||| ||  |||||||| |  |||||||| | |    
T  31359942 ttttctttcaatctaaataaattatttccacatttatcaagttttttcttgtgttttttctctcgcaatttcgtaatctgagtgtggtgttgtgttattc 31359843  T
Q  473 gtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    ||| |||||||||||||||| ||| ||  ||||||||||| ||||||| ||||||| |||| |||||||| ||||||||||||||||    
T  31359842 gtcgtcttgtgcgacgttgtatgatttcacgtcttgttgcagtgtttgcttggttcctatttaaagatcaactttagtcaatcacag 31359756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 21686430 - 21686269
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| ||  ||||||||||||| ||||||| ||||||| |||||| || |||||||| ||||    
T  21686430 ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcg-tgtgttgttcgtc 21686332  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||||| |   |||||| || ||||||||  ||||||||||||  |||| ||||||||||||    
T  21686331 gtcttgtgcggc---gtttgatttcgcgtcttgccgcggtgtttgttcagttcctattgaaagatc 21686269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 321 - 554
Target Start/End: Original strand, 35348166 - 35348402
Alignment:
Q  321 ggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaag 416  Q
    ||||||||| |||||||||||||| |||| ||||||||    ||| |||  ||||||  |||||| |||||||||||||||| ||| |||| ||||||||    
T  35348166 ggaggggtgattttaggtcattttttgacctagaatcacctctctacatcttttttcccttttctttcaatctaaataagtggttttcacaaatatcaag 35348265  T
Q  417 tgttctcttttgtgtttttc---gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcg 513  Q
    | || ||||||||||||||    ||||||| ||||||| |||||| ||||||||||| |||| ||||||||| |   |||||| || |  |||||||| |    
T  35348266 tttt-tcttttgtgtttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgtttcttgttgtg 35348361  T
Q  514 gtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
    ||||| |||| |||  |||||||||||| ||  ||||||||    
T  35348362 gtgttcgtttagttactattgaaagatcggcgatagtcaat 35348402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 389 - 541
Target Start/End: Original strand, 33920984 - 33921133
Alignment:
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacg 488  Q
    |||||||||||||| |||||||||||||| || ||||||||| |||| ||||||| ||||||| |||||| ||||||||||| || | |||| ||||||     
T  33920984 taaataagtgattttcacatatatcaagttttttcttttgtgctttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgccgtcttatgcgac- 33921082  T
Q  489 ttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
      |||||| ||  |||||||| || ||||| |||| |||| ||||||||||||    
T  33921083 --gtttgatttcacgtcttgtcgcagtgttcgtttagttcctattgaaagatc 33921133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 383 - 558
Target Start/End: Complemental strand, 48351366 - 48351196
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgt 482  Q
    |||||| ||||||||||||||||  |  ||||||| || |||| ||| ||||||||||||  ||||||||||||||| ||||||||||   || ||||||    
T  48351366 tcaatccaaataagtgatttcca--tgcatcaagttttttcttgtgtttttttcgtgattc-gtcgtctgagtgcgatgttgtgttgtttatcgtcttgt 48351270  T
Q  483 gcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    | |   |||||||| || |||||||||  ||||||| |||||||| |||||||||||||||||| |||||||||||    
T  48351269 gggc--ttgtttgatttcgcgtcttgtcacggtgttcgtttggtttatattgaaagatcagcttcagtcaatcaca 48351196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 263 - 496
Target Start/End: Complemental strand, 47320709 - 47320463
Alignment:
Q  263 ttttttagtgagagaaattccaacttct-tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca--- 358  Q
    ||||||||||||||||| | |||||||| ||||||||||| ||||||||  ||  |  || |||||||||||||||||||| | ||||||| |||||       
T  47320709 ttttttagtgagagaaacttcaacttctctttaagttttccttctctttcgctcatcgagaaggggtggttttaggtcattctttgacttaaaatcacaa 47320610  T
Q  359 -tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgt--------ttttcgtgattttgtcgt 449  Q
     |||||||  ||||||   ||||  || ||||||||||||||||| |||| |||||||| ||| ||||||||||        |||| ||||||| |||||    
T  47320609 ctctgcatcttttttcccctttcgttcgatctaaataagtgattttcacaaatatcaagcgttttcttttgtgttttttttttttttgtgatttcgtcgt 47320510  T
Q  450 ctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttga 496  Q
    || |||  ||| ||||||||| |||| ||||||||| ||||||||||    
T  47320509 ctaagtaagaccttgtgttgttcgtcgtcttgtgcggcgttgtttga 47320463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 427 - 546
Target Start/End: Complemental strand, 52934085 - 52933965
Alignment:
Q  427 tgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtg-tttgtttgg 525  Q
    |||||||||||| ||||  ||||||||||||| ||||||||||| |||||| ||||||  |||||||||| || || ||||||||||||| ||  ||||     
T  52934085 tgtgtttttcgttatttcatcgtctgagtgcggcgttgtgttgttcgtcattttgtgcagcgttgtttgatttcgcatcttgttgcggtgcttattttga 52933986  T
Q  526 ttcatattgaaagatcagctt 546  Q
    |||||||||||||||||||||    
T  52933985 ttcatattgaaagatcagctt 52933965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 260 - 541
Target Start/End: Original strand, 2520575 - 2520861
Alignment:
Q  260 tagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca 358  Q
    ||||||| |||||||||||| |||||||||| | |||  |||||||||| ||   |  |  ||||||||||||||||||||||||| |||| ||||||||    
T  2520575 tagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatca 2520674  T
Q  359 ----tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctga 453  Q
        ||| |||  ||||||   |||||  |||||||||||||||| ||| ||||| |||||||| || |||||||||||||| ||||||| ||||||| |    
T  2520675 cccctctacatcttttttccccttttcgttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttttgtgatttcgtcgtctaa 2520774  T
Q  454 gtgcgacgt--tgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||  ||  |||||||| |||| ||||||||| |   |||||| || |||| |||| ||| ||||||||   ||| ||||||||||||    
T  2520775 gtgcggtgttgtgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcgatgtttgttcaattcctattgaaagatc 2520861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 377 - 546
Target Start/End: Original strand, 9713828 - 9713999
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctc-ttttgtg-tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    ||||| ||||||||||||||||||||||||||||||||||| || || ||||||| |||||| | |||| |||||||||||  |   ||||||||| ||     
T  9713828 tttctttcaatctaaataagtgatttccacatatatcaagttttttctttttgtgttttttctttatttcgtcgtctgagtaaggttttgtgttgttcgc 9713927  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctt 546  Q
    | || ||||||||||||||||| ||  | | ||||||||| ||| ||||  ||||||||| |||||||||||    
T  9713928 cgtcatgtgcgacgttgtttgatttcacatattgttgcggagttcgtttctttcatattggaagatcagctt 9713999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 274 - 542
Target Start/End: Complemental strand, 35395965 - 35395696
Alignment:
Q  274 gagaaattccaacttct-tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatcatctgcattcttttt 372  Q
    |||||| |||||||||| ||||| |||||||||| ||| ||| ||  |  | ||||| |||||||||||||| |||| |  ||||   |||||  |||||    
T  35395965 gagaaactccaacttctctttaaattttctttctttttcactagtcgatcatgggtgattttaggtcattttttgaccttaaatc---tgcatctttttt 35395869  T
Q  373 ctgttttctatcaatctaaataagtgatttccacatatatcaa-gtgttctcttttgtgtttttcgtg--attttgtcgtctgagtgcgacgttgtgttg 469  Q
    || |||||| | ||| |||||||||||||| ||  || ||||| |||||||||| |||  ||||  ||  |||| |||||||||||||| ||||||||||    
T  35395868 ctcttttcttttaatgtaaataagtgattttcatgtacatcaaagtgttctcttatgttattttgttgtaatttcgtcgtctgagtgcggcgttgtgttg 35395769  T
Q  470 tccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    | |||| |||||| |||||||||||||  | | ||||||| |||| ||| ||||| ||| |||||||||||||    
T  35395768 ttcgtcgtcttgttcgacgttgtttgatctagtgtcttgtcgcggcgttcgtttgtttcttattgaaagatca 35395696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 546
Target Start/End: Original strand, 36194514 - 36194796
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatcatc- 360  Q
    |||||||||||||||||||    ||||| | ||||||||||| |||||| |||| |  |||| ||||| |||||| ||| ||| |||| || || ||||     
T  36194514 ttttttagtgagagaaattttgtcttctctctaagttttcttcctctttcacttatcgaggatgggtgattttagatcaatttttgacctaaaaacatcc 36194613  T
Q  361 ---tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgc 457  Q
       |||||  |||||||  ||||| ||||| |||||||||||||| |||||| ||||||| ||          | ||||||||||| || |||| |||||    
T  36194614 ctctgcatcttttttctcctttctttcaatttaaataagtgattttcacatacatcaagtttt----------tctttcgtgatttcgttgtcttagtgc 36194703  T
Q  458 gacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtc--ttgt--tgcggtgtttgtttggttcatattgaaagatcagctt 546  Q
    ||||||||||||| |||| ||||||||| |||||||||| || || ||  ||||  ||||||||| ||||||||| |||||||||||||||||    
T  36194704 gacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtattgaaagatcagctt 36194796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 377 - 552
Target Start/End: Complemental strand, 12199881 - 12199709
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtca 476  Q
    ||||| ||||| || ||| ||| ||| |||| ||| ||||| |||| |||||||||||| ||||||| |||||||||||| | ||||||||||| | ||     
T  12199881 tttctttcaatttacatatgtggttttcacacatagcaagttttctattttgtgttttttgtgatttcgtcgtctgagtgtggcgttgtgttgttcatcg 12199782  T
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtca 552  Q
    | ||||||  |    ||||| ||||||||||||||||||||| |||| ||||||||||||| |||| ||| |||||    
T  12199781 ttttgtgcagc---ttttgattttgcgtcttgttgcggtgttcgtttagttcatattgaaatatcaacttcagtca 12199709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 422 - 559
Target Start/End: Complemental strand, 33332718 - 33332578
Alignment:
Q  422 tcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgt--tgcggtgtt 518  Q
    |||||||||||||| |||||||| |||||||| ||||| |||||||||||  |||  ||||||||||||||||||| || || ||||||  |||||||||    
T  33332718 tcttttgtgttttttcgtgatttcgtcgtctgtgtgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgtt 33332619  T
Q  519 tgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
     |||| |||  ||||||||||||| ||| || |||||||||    
T  33332618 cgtttcgtttttattgaaagatcaacttcagacaatcacag 33332578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 383 - 551
Target Start/End: Original strand, 4937758 - 4937925
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgt 482  Q
    |||||||||||||||||||| || |||||| |||| || |||||| ||||||  |||||||  |||||||||| ||||||||| ||||  ||| | | ||    
T  4937758 tcaatctaaataagtgattttcatatatattaagttttttcttttttgttttgtgtgatttcttcgtctgagtacgacgttgtcttgtatgtcgt-tagt 4937856  T
Q  483 gcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtc 551  Q
    ||| |||||||||| ||| | ||||||||||| ||| ||||| ||  ||||||||||||| ||| ||||    
T  4937857 gcggcgttgtttgattttacatcttgttgcggagttcgtttgatttttattgaaagatcaacttcagtc 4937925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 320 - 480
Target Start/End: Complemental strand, 19853761 - 19853597
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatca 414  Q
    ||||||||||||||||||||||||| |||| ||||||||    ||| |||  ||||||   ||||||  ||||||||||||||| ||| ||||| |||||    
T  19853761 aggaggggtggttttaggtcatttt-tgacctagaatcacccctctacatcttttttccccttttcttccaatctaaataagtggttttcacatctatca 19853663  T
Q  415 agtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatctt 480  Q
    ||| || |||||| ||||||| ||||||| ||||||| |||||| ||||||||||| |||| ||||    
T  19853662 agttttttcttttttgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtctt 19853597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 383 - 556
Target Start/End: Complemental strand, 2069761 - 2069592
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgt 482  Q
    ||||||||||||||||||||||||| ||||||| | ||   |  ||| ||||| |||||||  |  ||| |||| | |||| ||| || ||||||| |||    
T  2069761 tcaatctaaataagtgatttccacacatatcaattttt---tggtgttttttttgtgatttctttatctaagtgtggcgttatgt-gttcgtcatcctgt 2069666  T
Q  483 gcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    |||||||||||||| || || |||||||||||| ||  ||||||||||||||||| ||||| ||||||||||||    
T  2069665 gcgacgttgtttgatttcgcatcttgttgcggtattcatttggttcatattgaaatatcagttttagtcaatca 2069592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 324 - 541
Target Start/End: Original strand, 32766377 - 32766596
Alignment:
Q  324 ggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtg 418  Q
    ||||||||||||||||||||| |||| ||||||||    ||| |||  ||||||   |||||| ||||||||| |||||| ||| ||||| ||||||||     
T  32766377 ggggtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaagtaagtgtttttcacatctatcaagtt 32766476  T
Q  419 ttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtt 518  Q
    ||  |||||  |||||| ||||||| ||||||| ||||||  |||||||||| |||| ||||||||| ||||   ||| || |||| |||| ||||||||    
T  32766477 tttcctttttggttttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtt 32766573  T
Q  519 tgtttggttcatattgaaagatc 541  Q
    ||||  |||| |||| |||||||    
T  32766574 tgttcagttcctattaaaagatc 32766596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 320 - 484
Target Start/End: Complemental strand, 22558715 - 22558546
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctg--ttttctatcaatctaaataagtgatttccacatatatc 413  Q
    ||||||||||||||||||||||||| |||| ||||||||    ||| |||  ||||||    |||||| |||||||||||||||| ||| ||||| ||||    
T  22558715 aggaggggtggttttaggtcattttttgacatagaatcacctctctacatcttttttcccctttttctttcaatctaaataagtggttttcacatctatc 22558616  T
Q  414 aagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgc 484  Q
    |||| || |||||||||||||| |||||||| |||||| |||||| | || |||||| | || ||||||||    
T  22558615 aagttttttcttttgtgttttt-gtgattttatcgtctaagtgcggcattttgttgttcatcgtcttgtgc 22558546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 378 - 541
Target Start/End: Original strand, 5119261 - 5119421
Alignment:
Q  378 ttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcat 477  Q
    |||| |||||||||||||||| ||| |||||||||||||| ||  ||||||||||||  ||||||| ||||||| ||||||   ||||||||| |||  |    
T  5119261 ttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgttttgtgtgatttcgtcgtctaagtgcggtattgtgttgttcgttgt 5119360  T
Q  478 cttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||| |||| |   |||||| |||| ||||| | |||||||| |||| |||| ||||||||||||    
T  5119361 cttttgcggc---gtttgattttgtgtcttatcgcggtgttcgtttagttcctattgaaagatc 5119421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 390 - 541
Target Start/End: Complemental strand, 17949499 - 17949351
Alignment:
Q  390 aaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgt 489  Q
    ||||||||| ||| |||| ||||||||| ||  ||||||||||||| ||||||| ||||||| |||||| |||||||||||  ||| | ||||||| |      
T  17949499 aaataagtggttttcacacatatcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggc-- 17949402  T
Q  490 tgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     |||||| ||||||| |||| |||||||| ||||  ||| ||||||||||||    
T  17949401 -gtttgattttgcgttttgtcgcggtgttcgtttaattcctattgaaagatc 17949351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 390 - 541
Target Start/End: Complemental strand, 17953351 - 17953203
Alignment:
Q  390 aaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgt 489  Q
    ||||||||| ||| |||| ||||||||| ||  ||||||||||||| ||||||| ||||||| |||||| |||||||||||  ||| | ||||||| |      
T  17953351 aaataagtggttttcacacatatcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggc-- 17953254  T
Q  490 tgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     |||||| ||||||| |||| |||||||| ||||  ||| ||||||||||||    
T  17953253 -gtttgattttgcgttttgtcgcggtgttcgtttaattcctattgaaagatc 17953203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 319 - 541
Target Start/End: Original strand, 9178215 - 9178435
Alignment:
Q  319 aaggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctg--ttttctatcaatctaaataagtgatttccacatatat 412  Q
    ||||||||||||| |||||||||||| |||| ||||||||    ||| ||| ||||||||   |||||| ||||||||||||| || ||| ||||||||     
T  9178215 aaggaggggtggtcttaggtcattttttgacctagaatcacccttctacat-ctttttctcccttttctttcaatctaaataaatggttttcacatata- 9178312  T
Q  413 caagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgc 512  Q
      |||||| | ||||||| |||| |||||||  || ||| ||||||||||||| |||| |||||||||||| | |   |||||| || ||||||||| ||    
T  9178313 --agtgtt-tattttgtgctttttgtgatttcatcatctaagtgcgacgttgtattgttcgtcatcttgtgtggc---gtttgatttcgcgtcttgtcgc 9178406  T
Q  513 ggtgtttgtttggttcatattgaaagatc 541  Q
    | |||| |||| |||| ||||||||||||    
T  9178407 gttgttcgtttagttcctattgaaagatc 9178435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 327 - 541
Target Start/End: Original strand, 54021727 - 54021942
Alignment:
Q  327 gtggttttaggtcattttctgacttagaatcatc----tgcattctttttc-tgttttctatcaatctaaataagtgatttccacatatatcaagtgttc 421  Q
    |||||||||||||||||| |||| || |||||||    | |||  |||||| | |||||| |||||||||||||||| ||| |||||||||| ||| ||     
T  54021727 gtggttttaggtcattttttgacataaaatcatccctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatccagttttt 54021826  T
Q  422 tcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgt 521  Q
     ||||||||||||| ||||||| || |||| | |||| | |||||||||  ||| ||||||||| |   |||||| || | ||||||| |||||||| ||    
T  54021827 ccttttgtgttttt-gtgatttcgttgtctaattgcggcattgtgttgttagtcgtcttgtgcggc---gtttgatttcgtgtcttgtcgcggtgttcgt 54021922  T
Q  522 ttggttcatattgaaagatc 541  Q
    || |||| ||||||||||||    
T  54021923 ttagttcctattgaaagatc 54021942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 377 - 456
Target Start/End: Original strand, 47158148 - 47158227
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtg 456  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||| ||||||| ||| ||| ||||    
T  47158148 tttctttcaatttaaataagtgatttccacatatatcaagttttttcttttgtgttttttgtgatttcgtcatctaagtg 47158227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 430 - 524
Target Start/End: Complemental strand, 52204469 - 52204375
Alignment:
Q  430 gtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttg 524  Q
    |||||||||||||| ||| | |||||| ||||||| ||||| |||| ||||||| ||| |||||||| ||||||||||||| ||||||| |||||    
T  52204469 gtttttcgtgatttcgtcatttgagtgtgacgttgagttgttcgtcgtcttgtgtgacattgtttgattttgcgtcttgttacggtgttcgtttg 52204375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 431 - 558
Target Start/End: Complemental strand, 31891428 - 31891297
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtc--ttgt--tgcggtgtttgtttggt 526  Q
    ||||||||||||| ||||||| |||||||||||||||||| |||| |||||||   |||||||||| || || ||  ||||  ||||||||| |||||||    
T  31891428 tttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgtagcgttgtttgatttcgcatccgttgttgtgcggtgttcgtttggt 31891329  T
Q  527 tcatattgaaagatcagctttagtcaatcaca 558  Q
    || |||||||| ||||| || || ||||||||    
T  31891328 tcgtattgaaaaatcagtttcagacaatcaca 31891297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 453 - 538
Target Start/End: Original strand, 43853436 - 43853521
Alignment:
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaag 538  Q
    |||||||| ||||||||| | |||||||||||| |||||||||| || |||| ||||||||||| |  ||||||||||||||||||    
T  43853436 agtgcgacattgtgttgttcatcatcttgtgcggcgttgtttgatttcgcgtattgttgcggtgctcatttggttcatattgaaag 43853521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 320 - 541
Target Start/End: Original strand, 53810887 - 53811110
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctg--ttttctatcaatctaaataagtgatttccacatatatc 413  Q
    ||||||||||||||||||||||||| |||| || |||||    ||| ||| |||||||    |||||| ||||| |||||||||||||| ||||| ||||    
T  53810887 aggaggggtggttttaggtcattttttgacctataatcacccctctacat-ctttttcccccttttctttcaatttaaataagtgattttcacatctatc 53810985  T
Q  414 aagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcg 513  Q
    ||||  |  ||||||||||||| || |||| ||| ||| | |||| |||| |||||| |||| ||||||||| |   |||||| || |||| |||| |||    
T  53810986 aagttattccttttgtgttttttgtcatttcgtcatctaaatgcggcgttttgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcg 53811082  T
Q  514 gtgtttgtttggttcatattgaaagatc 541  Q
    | |||||||  |||| ||||||||||||    
T  53811083 gggtttgttcagttcctattgaaagatc 53811110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 378 - 541
Target Start/End: Complemental strand, 56040831 - 56040673
Alignment:
Q  378 ttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcat 477  Q
    |||| |||||||||||||||| ||| ||||| |||||||| || | | |||||||||| ||||||| ||||| | |||||| |||| |||||| |||| |    
T  56040831 ttctttcaatctaaataagtggttttcacatctatcaagtttttt-tcttgtgttttt-gtgatttcgtcgtttaagtgcggcgttttgttgttcgtcgt 56040734  T
Q  478 cttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||||| ||||   | | |||||||||||| || |||||||||| |||| ||||| ||||||    
T  56040733 cttgtgcggcgtt---taattttgcgtcttgtcgcagtgtttgtttagttcctattggaagatc 56040673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 391 - 542
Target Start/End: Complemental strand, 7009148 - 7008999
Alignment:
Q  391 aataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgtt 490  Q
    ||||| ||||||||||||| |||||||  | | | |||||||||||||||||| ||| | |||||||  |||||||||||  ||| | || |  || |||    
T  7009148 aataactgatttccacatacatcaagt--tatttattgtgtttttcgtgatttcgtcatttgagtgcagcgttgtgttgtttgtcgttttttatgatgtt 7009051  T
Q  491 gtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    |||||| |||||| ||| |||| ||||||||||| |||||||||||| ||||    
T  7009050 gtttgattttgcgccttattgcagtgtttgtttgattcatattgaaacatca 7008999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 434 - 540
Target Start/End: Complemental strand, 3336259 - 3336152
Alignment:
Q  434 ttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcg-acgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatat 532  Q
    |||||||||||||| |||||||| |  | |||||||| |||| || |||||| ||||||||||| ||| | |||||||||||||||  |||| |||||||    
T  3336259 ttcgtgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcctgtgcggacgttgtttgattttccatcttgttgcggtgttcatttgattcatat 3336160  T
Q  533 tgaaagat 540  Q
    ||||||||    
T  3336159 tgaaagat 3336152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 383 - 470
Target Start/End: Original strand, 52978751 - 52978837
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgt 470  Q
    |||||||||||||||||||| |||||||||||||| || || |||| |||||| ||||||| | ||||| |||||| |||||||||||    
T  52978751 tcaatctaaataagtgattttcacatatatcaagt-ttttcctttgggttttttgtgatttcggcgtctaagtgcggcgttgtgttgt 52978837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 546
Target Start/End: Complemental strand, 1621640 - 1621526
Alignment:
Q  433 tttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtc--ttgt--tgcggtgtttgtttggttc 528  Q
    ||||||||||||||| | | ||||||||||||||||||||||| |||||||   |||||||||| || || ||  ||||  || |||||| |||||||||    
T  1621640 tttcgtgattttgtcattttagtgcgacgttgtgttgtccgtcgtcttgtg---cgttgtttgatttcgcatcctttgttgtgtggtgttcgtttggttc 1621544  T
Q  529 atattgaaagatcagctt 546  Q
     |||||||||||||||||    
T  1621543 gtattgaaagatcagctt 1621526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 463 - 540
Target Start/End: Original strand, 2624512 - 2624589
Alignment:
Q  463 tgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    |||||||| |||| ||||||||| ||| |||||| ||  |||||||||||||||||| |||| |||||||||||||||    
T  2624512 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttcccgtcttgttgcggtgtttatttgattcatattgaaagat 2624589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 322 - 451
Target Start/End: Original strand, 45418387 - 45418521
Alignment:
Q  322 gaggggtggttttaggtcattttctgacttagaatcatc----tgcat-tctttttctgttttctatcaatctaaataagtgatttccacatatatcaag 416  Q
    |||| |||||||||||||||||| |||| ||||||||||    | ||  |||||| || |||||| ||||| |||||||| | ||| |||||||||||||    
T  45418387 gaggagtggttttaggtcattttttgacctagaatcatccctctacacctcttttcctcttttctctcaatataaataagaggttttcacatatatcaag 45418486  T
Q  417 tgttctcttttgtgtttttcgtgattttgtcgtct 451  Q
    | ||  ||||||||||||| ||||||| |||||||    
T  45418487 tttttccttttgtgttttttgtgatttcgtcgtct 45418521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 438 - 558
Target Start/End: Original strand, 9048644 - 9048763
Alignment:
Q  438 tgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
    ||||||| ||||||||||||| |||| | ||||  ||| ||||||||| |||||| ||| || | |||||||||||||||| ||||||||  | ||||||    
T  9048644 tgattttttcgtctgagtgcggcgtt-tcttgtttgtcgtcttgtgcggcgttgtctgatttcgggtcttgttgcggtgttcgtttggtttcttttgaaa 9048742  T
Q  538 gatcagctttagtcaatcaca 558  Q
    ||| ||||| ||| |||||||    
T  9048743 gataagcttcagttaatcaca 9048763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 368 - 519
Target Start/End: Original strand, 9634586 - 9634742
Alignment:
Q  368 tttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-----cgtgattttgtcgtctgagtgcgacgt 462  Q
    |||||||  ||||| || ||||||||||||||||| ||||||||||| ||||| |||||| |||||||     ||| |||| ||| |||||||||||||     
T  9634586 tttttctcatttctttcgatctaaataagtgattttcacatatatcatgtgttttcttttatgtttttgttcccgtaatttcgtcttctgagtgcgacgc 9634685  T
Q  463 tgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgttt 519  Q
    |||||| |  ||| |||| |||||  |||||||| ||  | ||||||||| ||||||    
T  9634686 tgtgttatttgtcgtcttatgcgatattgtttgatttctcatcttgttgcagtgttt 9634742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 424 - 554
Target Start/End: Original strand, 53444086 - 53444213
Alignment:
Q  424 ttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgttt 523  Q
    |||||| ||||| ||||||| ||||||| ||| |||||||||||||| |||| |||||||||    | ||||| || |||| |||| |||||||||||||    
T  53444086 ttttgttttttttgtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcgg---tatttgatttcgcgttttgtcgcggtgtttgttt 53444182  T
Q  524 ggttcatattgaaagatcagctttagtcaat 554  Q
      ||| |||||||||||| || | |||||||    
T  53444183 atttcctattgaaagatcggcatcagtcaat 53444213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 399 - 512
Target Start/End: Complemental strand, 42032691 - 42032577
Alignment:
Q  399 atttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaa 497  Q
    ||||||| ||||||||||| || |||||||||||||| ||||||||  ||||  ||||||| |||| | ||||   || |||||||||| |||||||||     
T  42032691 atttccatatatatcaagtcttttcttttgtgttttttcgtgatttcttcgttcgagtgcggcgttattttgttaatcgtcttgtgcgatgttgtttgat 42032592  T
Q  498 tttgcgtcttgttgc 512  Q
    || ||||||||||||    
T  42032591 ttcgcgtcttgttgc 42032577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 325 - 490
Target Start/End: Original strand, 43510063 - 43510231
Alignment:
Q  325 gggtggttttaggtcattttctgacttagaatca----tctgcat-tctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgt 419  Q
    |||||||||||||||||||| |||| ||||||||    ||| ||| | ||||||  |||||| ||||||||||||||||  || ||||| |||||||| |    
T  43510063 gggtggttttaggtcattttttgacctagaatcactcctctacatctttttttcccttttctttcaatctaaataagtggctttcacatttatcaagttt 43510162  T
Q  420 tctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgtt 490  Q
    |  ||||   |||||| ||||||| ||||||| |||||| ||||||||| |  ||| ||||||||| ||||    
T  43510163 ttccttt--cgttttttgtgatttcgtcgtctaagtgcggcgttgtgttatttgtcgtcttgtgcggcgtt 43510231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 465 - 542
Target Start/End: Original strand, 868180 - 868257
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    |||||| |||| ||||||||| |||||||||| ||  |||||| ||||||||||  |||| |||||||||||||||||    
T  868180 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatca 868257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 431 - 554
Target Start/End: Original strand, 8670460 - 8670580
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcat 530  Q
    ||||| ||||||||||||| | |||||| |||||||||||  |||||||||||   || ||||||| || ||| ||||| |||||||| ||||  ||| |    
T  8670460 ttttttgtgattttgtcgtgtaagtgcggcgttgtgttgttagtcatcttgtg---cggtgtttgatttcgcgacttgtcgcggtgttcgtttatttcct 8670556  T
Q  531 attgaaagatcagctttagtcaat 554  Q
    ||||||||||| || | |||||||    
T  8670557 attgaaagatcggcatcagtcaat 8670580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 537
Target Start/End: Complemental strand, 10389825 - 10389753
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
    |||||| |||| ||||||||| |||||||||| ||| |||||| ||||||||||  |||| ||||||||||||    
T  10389825 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaaa 10389753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 24099259 - 24099094
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt---cgtgattttgtcgtctgagtgcgacgttgtgttgtcc 472  Q
    |||||| |||||||||||||||||||| ||||| ||||||||  ||  |||||| |||||     |||||| ||||||| |||||| | || |||||| |    
T  24099259 ttttctttcaatctaaataagtgattttcacatctatcaagttgtccattttgtatttttttgtatgatttcgtcgtctaagtgcggcattttgttgttc 24099160  T
Q  473 gtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||| ||||||||| |   | |||| || ||||||||| |||| |||||||  |||| ||||||||||||    
T  24099159 gtcgtcttgtgcggc---gattgatttcgcgtcttgtcgcggagtttgttcagttcctattgaaagatc 24099094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 490
Target Start/End: Complemental strand, 29120545 - 29120438
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatca-agtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttg 481  Q
    |||||||||||||||| ||| ||||||||||  | | |||| |||||||||||| ||||||| ||||||| |||||| || |||||||| | || |||||    
T  29120545 tcaatctaaataagtggttttcacatatatccgatttttct-ttttgtgttttttgtgatttcgtcgtctaagtgcggcgctgtgttgttcatcgtcttg 29120447  T
Q  482 tgcgacgtt 490  Q
    | |||||||    
T  29120446 tacgacgtt 29120438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 437 - 540
Target Start/End: Original strand, 37683868 - 37683972
Alignment:
Q  437 gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttg-tttggttcatattga 535  Q
    ||||||||  |||||||||||| ||||||||||| | || |||||||    ||||||||| || |||||||||||||||||| | |||||||  ||||||    
T  37683868 gtgatttttacgtctgagtgcggcgttgtgttgttcatcgtcttgtgtagagttgtttgatttcgcgtcttgttgcggtgttcgttttggtttctattga 37683967  T
Q  536 aagat 540  Q
    |||||    
T  37683968 aagat 37683972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 480
Target Start/End: Complemental strand, 40066244 - 40066140
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| ||||| |||||||||| ||| ||||||| | |||| ||  ||||||||||||  |||||||  |||||| |||||| ||||||||||| ||||    
T  40066244 ttttctttcaatataaataagtggttttcacatattttaagtttttccttttgtgttttatgtgatttcatcgtctaagtgcggcgttgtgttgttcgtc 40066145  T
Q  476 atctt 480  Q
     ||||    
T  40066144 gtctt 40066140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 404 - 553
Target Start/End: Original strand, 7393214 - 7393365
Alignment:
Q  404 cacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgtt-gtttgaatttg 501  Q
    ||||||||||||||  | |||||| ||||||| |||||||| |||||  ||||||   |||||||||  |||| |||||| |||| || |||||| ||      
T  7393214 cacatatatcaagttgtttcttttatgttttttcgtgatttcgtcgttcgagtgcagtgttgtgttgctcgtcgtcttgttcgacatttgtttgatttca 7393313  T
Q  502 cgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaa 553  Q
    | |||||||| |||||| ||||| ||| ||||||||||||| ||| ||||||    
T  7393314 catcttgttgtggtgttcgtttgattcctattgaaagatcaacttaagtcaa 7393365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 434 - 541
Target Start/End: Complemental strand, 27593929 - 27593822
Alignment:
Q  434 ttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatatt 533  Q
    |||||||||| ||  |||||||| |  | |||||||| |||||||||||||||| || ||||| ||  |||||| ||||| ||||| |||  ||||||||    
T  27593929 ttcgtgatttcgttatctgagtgtggtggtgtgttgttcgtcatcttgtgcgactttttttgatttcccgtctttttgcgatgtttatttaattcatatt 27593830  T
Q  534 gaaagatc 541  Q
    ||||||||    
T  27593829 gaaagatc 27593822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 445 - 488
Target Start/End: Complemental strand, 49072848 - 49072805
Alignment:
Q  445 gtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacg 488  Q
    |||||||||||||||||||||||||| |||| ||||||||||||    
T  49072848 gtcgtctgagtgcgacgttgtgttgttcgtcgtcttgtgcgacg 49072805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 480
Target Start/End: Complemental strand, 19896673 - 19896624
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatctt 480  Q
    ||||| ||||||||||||||| |||||| ||||||||||| |||||||||    
T  19896673 ttttttgtgattttgtcgtctaagtgcggcgttgtgttgttcgtcatctt 19896624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 542
Target Start/End: Complemental strand, 53616721 - 53616644
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    |||||| |||| ||||||||| |||||||||| ||  ||||||  |||||||||  |||| |||||||||||||||||    
T  53616721 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatca 53616644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 4643876 - 4643952
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  4643876 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatc 4643952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 376 - 554
Target Start/End: Original strand, 10496261 - 10496430
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| | |||||||||||||| ||| ||||   ||||||| ||  |||||||| |||| ||   || ||||| | |||||| || |||||||| ||||    
T  10496261 ttttcttttaatctaaataagtggttttcaca---atcaagtttttccttttgtgatttttgt---ttcgtcgtgtaagtgcggcgatgtgttgttcgtc 10496354  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
     ||||||| ||||||   ||| |||||||||||| || ||||| |||| |||| |||||||||||| || | |||||||    
T  10496355 gtcttgtgtgacgtt---tgattttgcgtcttgtcgcagtgttcgtttagttcctattgaaagatcggcatcagtcaat 10496430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 25273901 - 25273977
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  25273901 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 25273977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 435
Target Start/End: Complemental strand, 29961107 - 29961055
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt 435  Q
    |||||||||||||||||||| ||||| |||||||| ||  |||||||||||||    
T  29961107 tcaatctaaataagtgattttcacatctatcaagtttttccttttgtgttttt 29961055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 43444411 - 43444487
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||| |||||   |||||||||  |||| ||||||||||||||||    
T  43444411 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtctacgtgcggtgttcatttgattcatattgaaagatc 43444487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 47417680 - 47417756
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  47417680 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 47417756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 536
Target Start/End: Original strand, 21090170 - 21090241
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaa 536  Q
    |||||| |||| |||||| ||||||||||||| ||| ||| || ||||||||||  |||| |||||||||||    
T  21090170 tgttgttcgtcgtcttgtacgacgttgtttgatttttcgtttttttgcggtgttcatttgattcatattgaa 21090241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 540
Target Start/End: Original strand, 29965653 - 29965728
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    |||||| |||| ||||||||| |||||||||| ||  ||||||  |||||||||  |||| |||||||||||||||    
T  29965653 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagat 29965728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 540
Target Start/End: Original strand, 51318003 - 51318078
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    |||||| |||| ||||||||| | |||||||| ||  |||||| ||||||||||  |||| |||||||||||||||    
T  51318003 tgttgttcgtcgtcttgtgcggcattgtttgatttcccgtcttcttgcggtgttaatttgattcatattgaaagat 51318078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 540
Target Start/End: Complemental strand, 56156776 - 56156670
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcat 530  Q
    ||||| ||||||| ||||||| |||| | ||||||||||| |||| ||||||| | |   |||||| || ||||||||| |||||||| |||| |||| |    
T  56156776 ttttttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggc---gtttgatttcgcgtcttgtcgcggtgttcgtttagttcct 56156680  T
Q  531 attgaaagat 540  Q
     |||||||||    
T  56156679 cttgaaagat 56156670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 533
Target Start/End: Complemental strand, 9145992 - 9145917
Alignment:
Q  462 ttgtgttgtccgtcatcttgtgcgacgttgtttgaatttg----cgtcttgttgcggtgtttgtttggttcatatt 533  Q
    ||||||||| |||| ||||||||| | |||||||| || |    | ||||||||||||||||||||||||||||||    
T  9145992 ttgtgttgttcgtcgtcttgtgcggcattgtttgatttcgttttcatcttgttgcggtgtttgtttggttcatatt 9145917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 18138986 - 18138908
Alignment:
Q  463 tgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||||| |||| ||||||||| |||||||||| ||| | ||||||||| |||||  |||| ||  ||||||||||||    
T  18138986 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatc 18138908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 331 - 406
Target Start/End: Complemental strand, 22064019 - 22063940
Alignment:
Q  331 ttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccac 406  Q
    |||||||||||||| |||| ||||||||    |||||||  |||||||  ||||| |||||||||||||||| |||||||    
T  22064019 ttttaggtcattttttgacctagaatcacccctctgcatattttttctcctttctttcaatctaaataagtgttttccac 22063940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 22212644 - 22212698
Alignment:
Q  46 gataaaacacaatcttgccattgaacaagatttctagttaaa-acataaacataa 99  Q
    |||||||||| |||||||||||||||||| ||||||  |||| ||||||||||||    
T  22212644 gataaaacacgatcttgccattgaacaaggtttctaaataaagacataaacataa 22212698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 49126199 - 49126121
Alignment:
Q  463 tgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||||| |||| ||||||||| |||||||||| ||| | ||||||||| |||||  |||| ||  ||||||||||||    
T  49126199 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatc 49126121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 495
Target Start/End: Complemental strand, 15730002 - 15729937
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatctt-gtgcgacgttgtttg 495  Q
    ||||| ||||||| ||||||| |||||||| |||| |||| |||| |||| |||||||||||||||    
T  15730002 ttttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttg 15729937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 482
Target Start/End: Original strand, 37030184 - 37030287
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtca 476  Q
    ||||| ||||| ||||||| |||||| |||| ||||||||| || | || ||| ||||| ||||||| ||| ||||||| || ||||||||||| ||||     
T  37030184 tttctttcaatttaaataaatgattttcacacatatcaagtttt-tattgtgtcttttt-gtgatttcgtcatctgagtacggcgttgtgttgttcgtcg 37030281  T
Q  477 tcttgt 482  Q
    ||||||    
T  37030282 tcttgt 37030287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 9528948 - 9528872
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||  ||||||  |||| ||||  |||| ||||||||||||||||    
T  9528948 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcatattgaaagatc 9528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 20569273 - 20569349
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| |||| ||||  ||||||||| ||| ||||||  |||||||||  |||| ||||||||||||||||    
T  20569273 tgttgttcgtcgtcttctgcggggttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 20569349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 34024508 - 34024433
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||  |||||||||||| ||| | |||| |||||||| || |||| ||||||||||||||||    
T  34024508 tgttgttcgtcgtcttgtatgacgttgtttgattttccatcttcttgcggtg-ttctttgattcatattgaaagatc 34024433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 43154085 - 43154009
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||| | |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  43154085 tgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 43154009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 43853272 - 43853324
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttctt-ttaagttttctttctcttt 310  Q
    ||||||||||||||||||||| | |||||| || | |||||||||||||||||    
T  43853272 ctagttttttagtgagagaaacttcaactttttatcaagttttctttctcttt 43853324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 49410241 - 49410317
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||  |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  49410241 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 49410317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 541
Target Start/End: Complemental strand, 50766571 - 50766507
Alignment:
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||||| |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  50766571 tcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 50766507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 126; Significance: 1e-64; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 251 - 559
Target Start/End: Complemental strand, 58400 - 58097
Alignment:
Q  251 agccgactctagtttttt-agtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctga 348  Q
    ||||||| |||||||||| ||||||||||| |||||||||| | ||||||||| || ||||| ||| ||  ||||||||||||||||||||||||| |||    
T  58400 agccgaccctagtttttttagtgagagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtcattttttga 58301  T
Q  349 cttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattt 443  Q
    | || |||||    ||||||| ||||||   |||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  58300 cctaaaatcacccctctgcatccttttttccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgattt 58201  T
Q  444 tgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcag 543  Q
      ||||||||||||| ||||||||||| |||            |||| ||||| ||||||||||||||||||||||||||| |||||| |||||||||||    
T  58200 catcgtctgagtgcggcgttgtgttgttcgt------------cgttttttgattttgcgtcttgttgcggtgtttgtttgtttcatactgaaagatcag 58113  T
Q  544 ctttagtcaatcacag 559  Q
    ||| ||||||||||||    
T  58112 cttcagtcaatcacag 58097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 1e-64; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 250 - 555
Target Start/End: Original strand, 30493303 - 30493609
Alignment:
Q  250 tagccgactctagttttttagtgagagaaattccaacttct-tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctga 348  Q
    |||||||| ||||||||||||||||||||| |||||| ||| |||||||||||||| ||||| ||| ||  | ||||| ||||||| ||||||||| |||    
T  30493303 tagccgaccctagttttttagtgagagaaactccaacctctctttaagttttctttttctttcactcgtcgaagaggg-tggttttcggtcattttttga 30493401  T
Q  349 cttagaatcatc--tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgt 446  Q
    | |||||||| |  |||||  ||||||  ||| || |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |    
T  30493402 cctagaatcacccatgcatcttttttcccttt-ctttcaaactaaataagtgatttccacatatatcaagtgttttcttttgtgtttttcgtgatttcct 30493500  T
Q  447 cgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctt 546  Q
    ||||||||||||  |||||||||| |||| ||||||||  |||||||||| || |  |||||||  |||||| ||||||||||||||||||||||| |||    
T  30493501 cgtctgagtgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctggtgttcgtttggttcatattgaaagatcaactt 30493600  T
Q  547 tagtcaatc 555  Q
     ||||||||    
T  30493601 cagtcaatc 30493609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 377 - 559
Target Start/End: Original strand, 28981078 - 28981258
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtca 476  Q
    ||||| |||||||||||||||||||||||||||||||||||||| | |||| | ||||  |||||||| |||||||||| || ||||||||||| ||||     
T  28981078 tttctttcaatctaaataagtgatttccacatatatcaagtgtttttttttttttttt--gtgattttatcgtctgagtacggcgttgtgttgttcgtcg 28981175  T
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    |||| ||||  ||||||||| ||||  |||||||| |||||| |||||||||||||| |||||| || |||||||||||||||    
T  28981176 tcttctgcggtgttgtttgattttgtatcttgttgtggtgttcgtttggttcatattcaaagattagttttagtcaatcacag 28981258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 322 - 507
Target Start/End: Original strand, 30776508 - 30776697
Alignment:
Q  322 gaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagt 417  Q
    |||||||| |||||||||| ||| |||| ||||||||    |||||||  |||||||  ||||| ||||||||||||||| ||||||||||| |||||||    
T  30776508 gaggggtgattttaggtcaatttttgacctagaatcacccctctgcatattttttctcctttctttcaatctaaataagtaatttccacatacatcaagt 30776607  T
Q  418 gttctcttttgtgtttt-tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtctt 507  Q
     || ||||||||||||| ||||||||| ||||||| |||||||||||||||||| |||||||||||||| |||||||||| ||||| ||||    
T  30776608 ttt-tcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcatcttgtgcggcgttgtttgattttgcatctt 30776697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 293 - 555
Target Start/End: Original strand, 1523221 - 1523485
Alignment:
Q  293 taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca---tctgcattctttttctgttttctatcaatct 389  Q
    |||||||| ||||||||| ||   | ||||||||||| |||||||||| ||| |||| ||||||||   |||||||| ||||||| |||||| |||||||    
T  1523221 taagttttatttctctttcacacatgaaggaggggtgattttaggtcaatttttgacctagaatcaccctctgcatt-tttttctcttttctttcaatct 1523319  T
Q  390 aaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgt 489  Q
    |||||||||||||||||||| ||||||| || |||| |   ||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||| |    
T  1523320 aaataagtgatttccacatacatcaagt-ttttcttgt---tttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacat 1523415  T
Q  490 tgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatc 555  Q
    ||||||| ||  | | || |    ||||||||| ||||||||| |||||||| |||||||| || |||||    
T  1523416 tgtttgatttcacatattttattgtgcggtgttcgtttggttcgtattgaaatatcagcttgagacaatc 1523485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 368 - 558
Target Start/End: Original strand, 8102612 - 8102806
Alignment:
Q  368 tttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt-tcgtgattttgtcgtctgagtgcgacgttgtg 466  Q
    |||||||  ||||| |||||||||||||||||||| |||| | ||||||| || ||||||||||||| ||||||||| ||||||| ||||| ||||||||    
T  8102612 tttttctcctttctttcaatctaaataagtgattttcacaaacatcaagtttt-tcttttgtgttttttcgtgatttcgtcgtcttagtgcaacgttgtg 8102710  T
Q  467 ttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    || | |||| ||||||||| |||||||||| || || |||| |    ||||||||||||||||||| ||||||||||||||||| || ||||||||    
T  8102711 tttttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgtttgtttggttcgtattgaaagatcagcttcagacaatcaca 8102806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 391 - 542
Target Start/End: Complemental strand, 7976355 - 7976203
Alignment:
Q  391 aataagtgatttccacatatatcaagtgttctcttttgtgttttt--cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacg 488  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||  |||||||| ||||||||||||||  |||||||||| |||| ||||||||| ||    
T  7976355 aataagtgatttccacatatat-aagtgttttcttttgtgtttttttcgtgatttcgtcgtctgagtgcgttgttgtgttgttcgtcgtcttgtgcggcg 7976257  T
Q  489 ttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    || ||| | | |||||||||||| |||||| |||| ||||||||| ||||||||    
T  7976256 ttttttaattatgcgtcttgttgtggtgttcgtttagttcatattaaaagatca 7976203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 250 - 541
Target Start/End: Complemental strand, 33053489 - 33053195
Alignment:
Q  250 tagccgactctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctga 348  Q
    |||||||| |||||||| ||||| |||||| |||||||||| | |||  |||||||||| ||   |  |  ||||||||||||||||||||||||| |||    
T  33053489 tagccgaccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttga 33053390  T
Q  349 cttagaatcatc----tgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattt 443  Q
    | ||||||||||    | |||  ||||||   |||||| |||||||||||||||| ||| ||||| |||||||| ||  ||||||||||||| |||||||    
T  33053389 cctagaatcatccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttgtgattt 33053290  T
Q  444 tgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||| |||||| ||||||||||| |||| ||||||||| |   |||||| || |||| |||| ||||||||||||  |||| | ||||||||||    
T  33053289 cgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatc 33053195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 259 - 541
Target Start/End: Complemental strand, 3913885 - 3913601
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||||||| |||||||||||| |||||||||| | |||  |||||||||| |||  |  |  ||||||| ||||||||||||||||| |||| |||||||    
T  3913885 ctagttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggg-tggttttaggtcattttttgacctagaatc 3913787  T
Q  358 a----tctgcattctttttctgttt-tctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctg 452  Q
    |    || ||||  ||||||   || ||| |||||||||||||||| ||| ||||| |||||||| || |||||||||||||| || |||| |||||||     
T  3913786 acccctccgcatcttttttcccattctctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttttgttatttcgtcgtcta 3913687  T
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| ||||||||||| |||| |||||||| ||   |||||| || ||||||||| ||||||||||||  |||| ||||||||||||    
T  3913686 agtgcggcgttgtgttgttcgtcgtcttgtgcaac---gtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatc 3913601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 254 - 558
Target Start/End: Complemental strand, 32192048 - 32191740
Alignment:
Q  254 cgactctagttttttagtgagagaaattccaacttcttttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttag 353  Q
    |||| |||||||||||| |||||||| || || ||  | |||||||||||||||||| | |  | ||||||||||||||||||||| |||| |||  ||     
T  32192048 cgaccctagttttttagagagagaaactctaattttgtctaagttttctttctctttcattcatcaaggaggggtggttttaggtccttttttgatctac 32191949  T
Q  354 aatca----tctgcattctttttctg--ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgt-gtttttcgtgattttgt 446  Q
    |||||    ||||||| |||||||    |||| | || |||||||||||||||||| |||||||||||||||| ||||||||  ||||||||||||||||    
T  32191948 aatcacccttctgcat-ctttttcccccttttatttcgatctaaataagtgatttctacatatatcaagtgttttcttttgtattttttcgtgattttgt 32191850  T
Q  447 cgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctt 546  Q
    ||||| |||||| ||||||||||| |||   |||||| | |||||||||  || |  | ||||| |||||||  |||||||||| |||||| |  |||||    
T  32191849 cgtctaagtgcggcgttgtgttgttcgttgacttgtgtggcgttgtttggtttcgtatattgtttcggtgttcatttggttcatcttgaaaaa--agctt 32191752  T
Q  547 tagtcaatcaca 558  Q
     |||||||||||    
T  32191751 cagtcaatcaca 32191740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 386 - 559
Target Start/End: Complemental strand, 1933877 - 1933701
Alignment:
Q  386 atctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt--cgtgattttgtcgtctgagtgcga-cgttgtgttgtccgtcatcttgt 482  Q
    |||||||||||| |||| |||||||||||||| || ||||||||||||||  |||||||| |||||||||| | |  ||||||||||   ||| ||||||    
T  1933877 atctaaataagttattttcacatatatcaagttttttcttttgtgtttttttcgtgatttcgtcgtctgagagtgggcgttgtgttgctagtcgtcttgt 1933778  T
Q  483 gcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    ||| | |||||||| |||| |||| |||||||||||||||||||||||||  |||||||| ||| | ||||||||||    
T  1933777 gcggcattgtttgattttgtgtctggttgcggtgtttgtttggttcatatcaaaagatcaacttcaatcaatcacag 1933701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 290 - 558
Target Start/End: Original strand, 545835 - 546110
Alignment:
Q  290 ttttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatca 385  Q
    |||||||||||||| |||||| |||  |  |||||||||| ||||||| |||||| |||| ||||||||    ||| |||  ||||||   ||||| |||    
T  545835 ttttaagttttcttcctctttcactcatcgaggaggggtgattttaggccatttt-tgacctagaatcactcttctacatcttttttcccctttctttca 545933  T
Q  386 atctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt-tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgc 484  Q
    |||||||||||  |||| |||||| ||||||| || ||||| ||||||| |||||||||  |||||| |||||||||||| ||||| |||| ||||||||    
T  545934 atctaaataagcaattttcacatacatcaagtttt-tctttcgtgttttttcgtgatttcatcgtcttagtgcgacgttgcgttgttcgtcgtcttgtgc 546032  T
Q  485 gacgttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||||||||||| ||  | | || |    ||||||||| ||||||||| ||||||||||||||||| || ||||||||    
T  546033 gacgttgtttgatttcacattttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcaca 546110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 431 - 546
Target Start/End: Complemental strand, 528487 - 528372
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcat 530  Q
    ||||||||||||| ||||||  |||||||||||||||| |  ||||||||||||| |||||||||| |||| |||||||||| |||||||||| |||| |    
T  528487 tttttcgtgatttcgtcgtccaagtgcgacgttgtgttatttgtcatcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttcgttctt 528388  T
Q  531 attgaaagatcagctt 546  Q
    || |||||||||||||    
T  528387 atcgaaagatcagctt 528372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 385 - 558
Target Start/End: Complemental strand, 26588648 - 26588482
Alignment:
Q  385 aatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgc 484  Q
    |||||||||||||| |||||||||||||||||| || | ||||||||       || ||  |||| ||||||||  |||||||||   ||| ||||||||    
T  26588648 aatctaaataagtggtttccacatatatcaagtttttttttttgtgt-------gaattcatcgtttgagtgcggagttgtgttgattgtcgtcttgtgc 26588556  T
Q  485 gacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    | |||||||||| ||  ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||    
T  26588555 ggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattgaaagatcaacttcagtcaatcaca 26588482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 376 - 541
Target Start/End: Original strand, 34018461 - 34018623
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| ||||| |||||||||| ||| |||||||||||||| || |||||||||||||| ||||||| ||||||| |||| | ||||||||||| ||||    
T  34018461 ttttctttcaatttaaataagtggttttcacatatatcaagttttttcttttgtgttttttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtc 34018560  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||| ||||||   ||| ||   ||||||| |||||||| |||| |||| ||||||||||||    
T  34018561 gtcttgtgagacgtt---tgatttcatgtcttgtcgcggtgttcgtttagttcctattgaaagatc 34018623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 376 - 541
Target Start/End: Original strand, 606105 - 606267
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||||| |||||| | ||  |||||||||| || ||||||| ||||||| |||||| ||||||||||| ||||    
T  606105 ttttctttcaatctaaataagtggttttcacatctatcaaatttttccttttgtgttatttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtc 606204  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||||||| |   |||||| || || | |||| ||||||||||||  |||| ||||||||||||    
T  606205 atcttgtgcggc---gtttgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatc 606267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 384 - 534
Target Start/End: Complemental strand, 7515382 - 7515236
Alignment:
Q  384 caatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtg 483  Q
    ||||||||||||||| ||| ||||| |||||||| |  |||||||||||||| ||||||| ||||||| |||||| |||| |||||| |||| ||||| |    
T  7515382 caatctaaataagtggttttcacatctatcaagtttcttcttttgtgttttt-gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttggg 7515284  T
Q  484 cgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattg 534  Q
    ||||   |||||| || ||||||||| ||||||||||||| |||| |||||    
T  7515283 cgac---gtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattg 7515236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 390 - 558
Target Start/End: Original strand, 14801735 - 14801907
Alignment:
Q  390 aaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacg 488  Q
    ||||||| ||||| |||||| ||||||| || ||||| ||| ||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||||| ||    
T  14801735 aaataagggattttcacatacatcaagtttt-tctttcgtgctttttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcg 14801833  T
Q  489 ttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
     ||||||| ||||  |||| |    ||| ||||| ||||||||| ||||||||||| ||||| || ||||||||    
T  14801834 ctgtttgattttgtatcttttattgtgctgtgttcgtttggttcgtattgaaagattagcttcagacaatcaca 14801907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 451 - 555
Target Start/End: Original strand, 31296793 - 31296897
Alignment:
Q  451 tgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagt 550  Q
    |||||||| ||||||||||| | |||||||||||| |||||||||| ||||| ||||||||| |||||  |||| |||||||||||| ||||| || |||    
T  31296793 tgagtgcggcgttgtgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaaaatcagtttcagt 31296892  T
Q  551 caatc 555  Q
    |||||    
T  31296893 caatc 31296897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 376 - 519
Target Start/End: Complemental strand, 32327406 - 32327266
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| ||||| |||||||||| ||| ||||| |||||||| ||  ||||||||||||| |||||||  | |||| |||||| ||||||||||| ||||    
T  32327406 ttttctttcaatataaataagtggttttcacatctatcaagtttttccttttgtgttttttgtgatttcatagtctaagtgcggcgttgtgttgttcgtc 32327307  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgttt 519  Q
     ||||||||| |   |||||| || ||||||||| |||||||||    
T  32327306 gtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtgttt 32327266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 377 - 558
Target Start/End: Original strand, 679006 - 679189
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt--tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    ||||| |||||||||||||  ||||| |||||||||||||| || |||| | | ||||  ||||||||| |||||  ||||||  | | ||||||| |||    
T  679006 tttctttcaatctaaataaccgattttcacatatatcaagttttttcttgttttttttcttcgtgatttcgtcgttcgagtgcagcatagtgttgttcgt 679105  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||||| |||| ||| ||||   |||||||||||||| ||| || ||||||||  ||||||||| |||| || |||||||||||    
T  679106 catcttatgcggcgtagtttagttttgcgtcttgttgtggtattcgtttggtttttattgaaaggtcagtttcagtcaatcaca 679189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 376 - 542
Target Start/End: Original strand, 23128519 - 23128682
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| ||| |||||||||||| ||| ||||| |||||||| ||  ||||||| ||||| |||||||  |||||| |||||| ||||||||||| ||||    
T  23128519 ttttctttcattctaaataagtggttttcacatctatcaagtttttccttttgtattttttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtc 23128618  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
     ||||||| | |   |||||| || |||| |||| || |||||||||  |||| |||||||||||||    
T  23128619 gtcttgtgtggc---gtttgatttcgcgttttgtcgcagtgtttgttcagttcttattgaaagatca 23128682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 388 - 483
Target Start/End: Original strand, 127583 - 127678
Alignment:
Q  388 ctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtg 483  Q
    ||||||||||| ||| |||||||||||||| ||  ||||||||||||| ||||||| ||||||| |||||  ||||||||||| |||| |||||||    
T  127583 ctaaataagtggttttcacatatatcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtg 127678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 320 - 463
Target Start/End: Original strand, 12170335 - 12170483
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatca 414  Q
    ||||||||||||||||||||||||| |||| ||||||||    ||| |||  ||||||   |||||| |||||||||||||||| ||| ||||| |||||    
T  12170335 aggaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatca 12170434  T
Q  415 agtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgtt 463  Q
    ||| ||   |||||||||||| ||||||| ||||||| |||||| ||||    
T  12170435 agtttttcgttttgtgttttttgtgatttcgtcgtctaagtgcggcgtt 12170483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 431 - 542
Target Start/End: Complemental strand, 34185830 - 34185719
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcat 530  Q
    ||||| |||||||  |||| |||||||| | ||||| |||  ||| ||||||| |||||||||||| |||||||||||||| ||||||  ||| ||||||    
T  34185830 ttttttgtgatttcatcgtttgagtgcggcattgtgctgtttgtcgtcttgtgtgacgttgtttgattttgcgtcttgttgtggtgttcttttagttcat 34185731  T
Q  531 attgaaagatca 542  Q
    ||||||||||||    
T  34185730 attgaaagatca 34185719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 541
Target Start/End: Complemental strand, 29320034 - 29319905
Alignment:
Q  410 tatcaagtgttctcttttgtgtttttc-gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttg 508  Q
    |||||||| ||  |||||||||||||  ||||||||||||||| |||||| ||||||||||| |||| |||| |||| |   |||||| || ||||||||    
T  29320034 tatcaagtttttccttttgtgtttttttgtgattttgtcgtctaagtgcggcgttgtgttgttcgtcctcttatgcggc---gtttgatttcgcgtcttg 29319938  T
Q  509 ttgcggtgtttgtttggttcatattgaaagatc 541  Q
    | ||||||||||||   ||||||||||||||||    
T  29319937 tcgcggtgtttgttaacttcatattgaaagatc 29319905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 368 - 541
Target Start/End: Complemental strand, 11321666 - 11321496
Alignment:
Q  368 tttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgt 467  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||| |||| || ||||||||||  ||  |||||| ||||||| ||||||  |||||||    
T  11321666 tttttctattttctttcaatctaaataagtggttttcacatatattaagttttttcttttgtgtaatttatgatttcgtcgtcttagtgcggtgttgtgt 11321567  T
Q  468 tgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||| |||  || ||   |||   |||||| ||  |||||||||| |||||| |||| |||| ||||||||||||    
T  11321566 tgttcgtggtcctgcatgac---gtttgatttcacgtcttgttgtggtgttcgtttagttcctattgaaagatc 11321496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 431 - 539
Target Start/End: Original strand, 19164664 - 19164772
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcat 530  Q
    |||||| ||||||||||||||| ||||| |||||||||||  ||| ||||||||||  |||||||| |||| ||| ||||| |||| | ||||| |  ||    
T  19164664 tttttcctgattttgtcgtctgtgtgcggcgttgtgttgtttgtcgtcttgtgcgaaattgtttgattttgtgtcatgttgtggtgatcgtttgctctat 19164763  T
Q  531 attgaaaga 539  Q
    |||||||||    
T  19164764 attgaaaga 19164772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 30608703 - 30608542
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgag-tgcgacgttgtgttgtccgt 474  Q
    |||||| ||||||||||| |||| ||| |||||||||||||| |||  |||||| ||||| ||||||| ||||||| || | || ||||||||||| |||    
T  30608703 ttttctttcaatctaaattagtggttttcacatatatcaagttttc-attttgtattttttgtgatttcgtcgtctaagttacgtcgttgtgttgttcgt 30608605  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    | ||||||||| |   |||||| ||||||| |||| || |||||  ||| |||| ||||||||||||    
T  30608604 cgtcttgtgcggc---gtttgattttgcgt-ttgtcgctgtgttcatttagttcctattgaaagatc 30608542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 386 - 537
Target Start/End: Original strand, 22571399 - 22571533
Alignment:
Q  386 atctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcg 485  Q
    |||||||||||||||||||||||||||||||| || |||||||| |                 ||||||| ||| |||||||||| |||| |||||||||    
T  22571399 atctaaataagtgatttccacatatatcaagttttttcttttgtat-----------------tctgagtacgatgttgtgttgttcgtcgtcttgtgcg 22571481  T
Q  486 acgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
     |||||||||| ||||||| |||||  |||||| |||||||| |||||||||    
T  22571482 gcgttgtttgattttgcgttttgttatggtgttcgtttggttaatattgaaa 22571533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 434 - 541
Target Start/End: Original strand, 25337545 - 25337652
Alignment:
Q  434 ttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatatt 533  Q
    |||||||||| ||| || ||||| |  | |||||||| |||| ||||| |||  ||||||||| ||| |||||||||||||||||  |||| ||||||||    
T  25337545 ttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgcgcggtgttgtttgatttttcgtcttgttgcggtgttcatttgattcatatt 25337644  T
Q  534 gaaagatc 541  Q
    ||||||||    
T  25337645 gaaagatc 25337652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 426 - 542
Target Start/End: Complemental strand, 13546802 - 13546689
Alignment:
Q  426 ttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttgg 525  Q
    |||||||||| || |||| ||||| |||||||| ||||||||||| |||| |||| |||| |   |||||| |||||| |||||||  ||||| ||||||    
T  13546802 ttgtgttttttgtaatttcgtcgtttgagtgcggcgttgtgttgttcgtcgtcttatgcggc---gtttgattttgcgccttgttgtagtgttcgtttgg 13546706  T
Q  526 ttcatattgaaagatca 542  Q
     |||| |||||||||||    
T  13546705 atcattttgaaagatca 13546689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 263 - 490
Target Start/End: Original strand, 32059691 - 32059924
Alignment:
Q  263 ttttttagtgagagaaattccaacttct-tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatcatc- 360  Q
    |||| |||||||||||||||||| |||| |||||   |||||||||||| | |  |  ||||  |||||||||| |||||| | |||| ||||||||||     
T  32059691 ttttctagtgagagaaattccaagttctctttaaacattctttctctttcattcatcgaggataggtggttttaagtcattgtttgacctagaatcatcc 32059790  T
Q  361 ---tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctctt-ttgtg-tttttcgtgattttgtcgtctgagt 455  Q
       | ||| |||||||  |||||| |||||||||||||||  ||| ||||| |||||||| || | || || || ||||| |||||||  |||||| |||    
T  32059791 ttctacat-ctttttcccttttctttcaatctaaataagtagttttcacatgtatcaagtttttttttcttctgtttttttgtgatttcttcgtctaagt 32059889  T
Q  456 gcgacgttgtgttgtccgtcatcttgtgcgacgtt 490  Q
    | ||||||||||||| |||| ||||||||| ||||    
T  32059890 gtgacgttgtgttgttcgtcgtcttgtgcggcgtt 32059924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 456
Target Start/End: Complemental strand, 68190 - 68110
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtg 456  Q
    |||||| | |||||||||||||| ||| ||||| |||||||| ||  ||||||||||||| ||||||| ||||||| ||||    
T  68190 ttttcttttaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtg 68110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 8496973 - 8497049
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||||||||||||| |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  8496973 tgttgttcgtcatcttgtgcggcgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattgaaagatc 8497049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 430 - 494
Target Start/End: Complemental strand, 31852323 - 31852259
Alignment:
Q  430 gtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgttt 494  Q
    |||||| ||||||| |||||||||||||||||||||||||| |||| |||||  | |||||||||    
T  31852323 gttttttgtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcttgaacaacgttgttt 31852259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 440 - 528
Target Start/End: Complemental strand, 1704246 - 1704158
Alignment:
Q  440 attttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttc 528  Q
    ||||||||||||||||| |  |||||||||| ||| ||||||||| || || ||| | ||  |||||||||||||||||  ||||||||    
T  1704246 attttgtcgtctgagtgtggtgttgtgttgttcgtgatcttgtgcaacattatttaatttctcgtcttgttgcggtgttcatttggttc 1704158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 23947389 - 23947313
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||  | |||| ||||||||||  |||| ||||||||||||||||    
T  23947389 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccatctttttgcggtgttcatttgattcatattgaaagatc 23947313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 4010807 - 4010712
Alignment:
Q  264 tttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca 358  Q
    |||||||||||||||| | || ||||| | ||||||||||||||| |||| || || |||||| |||  ||||| ||||||| |||| ||||||||    
T  4010807 tttttagtgagagaaacttcatcttctctctaagttttctttctcctttatttattgaggaggagtgactttagatcattttttgacctagaatca 4010712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 518
Target Start/End: Complemental strand, 33543693 - 33543638
Alignment:
Q  463 tgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtt 518  Q
    |||||||| |||| ||||||||| |||||||||| |||  ||||||||||||||||    
T  33543693 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttctgtcttgttgcggtgtt 33543638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 446 - 538
Target Start/End: Original strand, 3355088 - 3355177
Alignment:
Q  446 tcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaag 538  Q
    |||||| ||||||  |||||||||| |||| ||||||| ||||||   ||| || ||||||||||| |||||| |||| |||| |||||||||    
T  3355088 tcgtctaagtgcggtgttgtgttgttcgtcctcttgtgtgacgtt---tgatttcgcgtcttgttgtggtgttcgtttagttcctattgaaag 3355177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 492 - 542
Target Start/End: Complemental strand, 4010587 - 4010537
Alignment:
Q  492 tttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    ||||| |||||||| ||||||| |||||||||| ||| |||||||||||||    
T  4010587 tttgattttgcgtcatgttgcgatgtttgtttgattcctattgaaagatca 4010537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 496
Target Start/End: Complemental strand, 27097921 - 27097685
Alignment:
Q  260 tagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtc-attttctgacttagaa-- 355  Q
    |||||||||||||||||||| | ||  |||| | |||||||||||||||||| |||  || |||| | |||||||||||||  |||| | |  |||||      
T  27097921 tagttttttagtgagagaaacttcacattctctctaagttttctttctctttcactcattcaggaagagtggttttaggtctttttttttatatagaatc 27097822  T
Q  356 --tcatctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctga 453  Q
      ||||||| ||  ||||||  |||||| || |||||||||||||||      ||||||||||| || |||| ||| ||||||||||||| | |||| ||    
T  27097821 actcatctgaatcatttttc-attttctttcgatctaaataagtgat-----gatatatcaagttttttcttgtgt-tttttcgtgatttcgccgtccga 27097729  T
Q  454 gtgcgacgttgtg-ttgtccgtcatcttgtgcgacgttgtttga 496  Q
    | ||| | ||||| |||| |||| ||||||||||||||||||||    
T  27097728 gagcggcattgtgtttgttcgtcgtcttgtgcgacgttgtttga 27097685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 431 - 537
Target Start/End: Complemental strand, 31575644 - 31575538
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcat 530  Q
    ||||| ||||||| ||| ||||| ||||  ||| |||||| | || || ||||||||||||||||| ||  |||||||||||| |||| || || ||| |    
T  31575644 tttttagtgatttcgtcatctgaatgcggtgttatgttgttcatcgtcatgtgcgacgttgtttgatttctcgtcttgttgcgatgttcgtctgattcct 31575545  T
Q  531 attgaaa 537  Q
    |||||||    
T  31575544 attgaaa 31575538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 495
Target Start/End: Original strand, 10744676 - 10744741
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatctt-gtgcgacgttgtttg 495  Q
    ||||| ||||||| ||||||| |||||||| |||| |||| |||| |||| |||||||||||||||    
T  10744676 ttttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttg 10744741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 536
Target Start/End: Original strand, 34489254 - 34489327
Alignment:
Q  463 tgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaa 536  Q
    |||||||| |||| |||||||||||||||||||| ||  | | |||||| ||||||  |||| |||||||||||    
T  34489254 tgtgttgttcgtcgtcttgtgcgacgttgtttgatttcccatattgttgtggtgttcatttgattcatattgaa 34489327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 7876115 - 7876039
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| |||||||||||||||||||| ||| | ||||  |||||||||   ||| |||||||| |||||||    
T  7876115 tgttgttcgtcgtcttgtgcgacgttgtttgattttccatcttcgtgcggtgttcaattgattcatattaaaagatc 7876039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 7881173 - 7881097
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||| | ||||  |||||||||   ||| ||||||||||||||||    
T  7881173 tgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttcatgcggtgttcaattgattcatattgaaagatc 7881097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 502 - 558
Target Start/End: Original strand, 9380047 - 9380103
Alignment:
Q  502 cgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||||||||||| || ||||||||| | |||||||||| ||  ||||||||||||||    
T  9380047 cgtcttgttgcgatgattgtttggtacttattgaaagaccaattttagtcaatcaca 9380103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 541
Target Start/End: Original strand, 12652962 - 12653026
Alignment:
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||||| |||||||||| ||| | ||||  |||||||||  |||| ||||||||||||||||    
T  12652962 tcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatc 12653026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 25064242 - 25064318
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||  ||| ||  |||||||||  |||| ||||||||||||||||    
T  25064242 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgttttcgtgcggtgttcatttgattcatattgaaagatc 25064318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 504 - 556
Target Start/End: Original strand, 29743019 - 29743071
Alignment:
Q  504 tcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    |||||||||||||||| ||| ||  |||||||||||||| ||||||| |||||    
T  29743019 tcttgttgcggtgtttattttgtagatattgaaagatcaactttagttaatca 29743071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 3e-56; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 275 - 558
Target Start/End: Complemental strand, 10332848 - 10332558
Alignment:
Q  275 agaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca----tctgcat--tc 367  Q
    |||||||||||||||| | |||||||||||||||||| ||| ||  |  |||| |||||||| |||||||| ||| |||||||||    |||||||  |     
T  10332848 agaaattccaacttctctataagttttctttctctttcactcgtcgaacaggg-tggttttaagtcattttttgatttagaatcacacctctgcatcttt 10332750  T
Q  368 tttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtg 466  Q
    ||||| | |||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||  ||||| ||||||||||    
T  10332749 tttttatcttttctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgttttttcgtgattttgtcgcatgagtacgacgttgtg 10332650  T
Q  467 ttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    ||||  ||| ||||||||| | |||||||| || |||||||||||| ||||||||||| ||||||||||||||| ||  | |||||||||||    
T  10332649 ttgtttgtcgtcttgtgcggcattgtttgatttcgcgtcttgttgcagtgtttgtttgattcatattgaaagattaggctcagtcaatcaca 10332558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 263 - 558
Target Start/End: Complemental strand, 28541214 - 28540916
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatcatct 361  Q
    ||||||||||||||||| ||   ||||| | ||||||||||| |||||| |||  |  ||| |||||| |||||||||| ||| |||| ||||  | |||    
T  28541214 ttttttagtgagagaaactctttcttctctctaagttttcttcctctttcactcatcgaggtggggtgattttaggtcaatttttgacctaga--cctct 28541117  T
Q  362 gcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgac 460  Q
    ||||  ||||||   ||||| |||||||||||||||||||| |||||| ||||||| || ||||| |||||||| ||||||||  |||||| ||||||||    
T  28541116 gcatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaagtttt-tctttcgtgttttttcgtgatttcatcgtcttagtgcgac 28541018  T
Q  461 gttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtc--ttgt--tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    |||||||||| |||| ||||||||| |||||||||| || || ||  ||||  || |||||| ||||||||| ||||||||||| ||||| || ||||||    
T  28541017 gttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcatttgttgtgtggtgttcgtttggttcgtattgaaagattagcttcagacaatca 28540918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 250 - 541
Target Start/End: Original strand, 38597565 - 38597858
Alignment:
Q  250 tagccgactctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctga 348  Q
    |||||| | |||||||| |||||||||||| |||||||||| | |||  |||||||||| ||   |  |  ||||||||||||||||||| ||||| |||    
T  38597565 tagccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggttattttttga 38597664  T
Q  349 cttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgatttt 444  Q
    | ||||||||    ||| |||  ||||||  | |||| ||||| |||||||||||||| ||||| |||||||| ||  |||||||| |||| |||||||     
T  38597665 cctagaatcacccctctacatcttttttccctattctttcaatttaaataagtgattttcacatctatcaagtttttccttttgtgctttttgtgatttc 38597764  T
Q  445 gtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||| |||||| ||||||||||| |||| ||||||||| |   |||||| || ||||||||| | ||||||||||  |||| ||||||||||||    
T  38597765 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaaagatc 38597858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 250 - 541
Target Start/End: Original strand, 13006996 - 13007290
Alignment:
Q  250 tagccgactctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctga 348  Q
    |||||| | |||||||||||||| |||||| |||||||||| | |||  |||||||||| ||   |  |  ||||| ||||||||||||||||||| |||    
T  13006996 tagccggccctagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagaggtggttttaggtcattttttga 13007095  T
Q  349 cttagaatca----tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattt 443  Q
    | ||||||||    ||| ||   ||||||   |||||| |||||||||||||||| ||| ||||| |||||||| ||  ||||||||||||| |||||||    
T  13007096 cctagaatcacccctctacaccttttttcccattttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttgtgattt 13007195  T
Q  444 tgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||| |||||| ||||||||||| |||| ||||||||| |   |||||| |||| || |||| ||||||||||||| |||| | ||||||||||    
T  13007196 cgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgtgttttgtcgcggtgtttgtttagttcctcttgaaagatc 13007290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 263 - 496
Target Start/End: Original strand, 39567076 - 39567314
Alignment:
Q  263 ttttttagtgagagaaattccaacttct-tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca--- 358  Q
    |||||||||||||||||  ||  ||||| ||||||||||||| |||||| |||  |  |||||||||| |||||||||| ||| |||| ||||||||       
T  39567076 ttttttagtgagagaaacaccgtcttctctttaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacgc 39567175  T
Q  359 -tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt-tcgtgattttgtcgtctgagtg 456  Q
     |||||||  |||| |   ||||| |||||||||||||||||||| |||||| ||||||| || ||||| ||||||| ||||||| | ||||||| ||||    
T  39567176 ctctgcatctttttccccctttctttcaatctaaataagtgattttcacatacatcaagtttt-tctttcgtgttttttcgtgatctcgtcgtcttagtg 39567274  T
Q  457 cgacgttgtgttgtccgtcatcttgtgcgacgttgtttga 496  Q
    |||||||||||||| |||  ||||||||| ||||||||||    
T  39567275 cgacgttgtgttgttcgttgtcttgtgcggcgttgtttga 39567314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 293 - 494
Target Start/End: Complemental strand, 2979589 - 2979384
Alignment:
Q  293 taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatc 388  Q
    ||||||||||| |||||| |||  |  |||||||||| |||||||||| ||| |||| || |||||    |||||||  ||||||   ||||| ||||||    
T  2979589 taagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctataatcacccctctgcatcttttttcctctttctttcaatc 2979490  T
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgac 487  Q
    |||||||||||||| |||||| ||||||| || ||||| |||||||| |||||||| ||||||| |||||||||||||||||| |||| ||||||||| |    
T  2979489 taaataagtgattttcacatacatcaagtttt-tctttcgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggc 2979391  T
Q  488 gttgttt 494  Q
    |||||||    
T  2979390 gttgttt 2979384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 250 - 435
Target Start/End: Complemental strand, 8985258 - 8985063
Alignment:
Q  250 tagccgactctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggt-----cattt 343  Q
    |||||| | |||| |||||||||||||||| |||||||||| | ||||||||| |||||||| ||| ||| |||||||||| ||||||||     |||||    
T  8985258 tagccggccctagctttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtttaggaggggtgattttaggttaggtcattt 8985159  T
Q  344 tctgacttagaatca---tctgcattctttttctgttttctatcaatctaaa-taagtgatttccacatatatcaagtgttctcttttgtgttttt 435  Q
    | |||  || |||||   ||||||| |||||||  |||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  8985158 tttgatctaaaatcaccctctgcatcctttttccattttctttcaatctaaaataagtgatttccacatatatcaagtgttttcttttgtgttttt 8985063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 261 - 541
Target Start/End: Complemental strand, 6012448 - 6012165
Alignment:
Q  261 agttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca- 358  Q
    |||||||||||| |||||| |||||||||| | |||  |||||||||| ||   |  || ||||||||||||||||||||||||| |||| ||||||||     
T  6012448 agttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcac 6012349  T
Q  359 ---tctgcat-tctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgag 454  Q
       ||| ||| | ||||||  |||||| |||||||||||||||| ||| ||| | |||||||| ||  ||||||||||||| |||||||  |||||| ||    
T  6012348 ccctctacatctttttttcccttttctttcaatctaaataagtgtttttcacgtctatcaagtttttccttttgtgttttttgtgatttcatcgtctaag 6012249  T
Q  455 tgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||  |||||||||| |||| ||||||||| |   |||||| || |||| |||| ||||||||||||  |||| |||| |||||||    
T  6012248 tgcggtgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctattaaaagatc 6012165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 377 - 559
Target Start/End: Complemental strand, 8088401 - 8088221
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttc--gtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    ||||| || ||||||||||||||||| |||| |||||||  ||| ||||||||||||||   |||||||   ||||| |||||||| |||||||||   |    
T  8088401 tttctttcgatctaaataagtgattttcacaaatatcaaacgttttcttttgtgttttttttgtgattt---cgtctaagtgcgaccttgtgttgtttat 8088305  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    | ||||||||| |||||||||| || || ||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  8088304 cgtcttgtgcggcgttgtttgatttggcatcttgttgcagtgttcgtt-ggttcatattgaaagatcagcttcagtcaatcacag 8088221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 24229974 - 24229811
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgt-ttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    |||||| |||||||||||||||||||| ||||| ||||||||  | |||||||||| |||| ||||||| ||| ||| |||||| |||| |||||| |||    
T  24229974 ttttctttcaatctaaataagtgattttcacatctatcaagttgtttcttttgtgtttttttgtgatttcgtcatctaagtgcggcgttttgttgttcgt 24229875  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    | ||||||| |||   |||||| || ||||||||| ||||||||||||| |||| ||||||||||||    
T  24229874 cgtcttgtgtgac---gtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatc 24229811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 558
Target Start/End: Original strand, 14211014 - 14211305
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca--- 358  Q
    ||||||||||||||||| ||   ||||| | ||||||||||| |||||| |||  |  ||||||| || |||||||||| ||| |||| ||||||||       
T  14211014 ttttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgaggaggg-tgattttaggtcaatttttgacctagaatcaccc 14211112  T
Q  359 -tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgc 457  Q
     ||||||| |||||||  ||| || |||||||||||||||||||| |||||| ||||||| ||          | ||||||||||| ||||||| |||||    
T  14211113 ctctgcat-ctttttcccttt-ctttcaatctaaataagtgattttcacatacatcaagtttt----------tatttcgtgatttcgtcgtcttagtgc 14211200  T
Q  458 gacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtc--ttgt--tgcggtgtttgtttggttcatattgaaagatcagctttagtcaa 553  Q
    ||| ||||||||| |||| ||||||||| |||||||||| || || ||  ||||  ||||||||| ||||||||| ||||||||||||||||| || |||    
T  14211201 gacattgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaa 14211300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 376 - 558
Target Start/End: Complemental strand, 14726651 - 14726471
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    |||||| ||||||||| |||||| ||| || ||||||||||| || |||| |||| ||||| ||||||| ||||||| ||||||  |||||||||| |||    
T  14726651 ttttctttcaatctaactaagtggttttcatatatatcaagttttttcttatgtgtttttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgt 14726552  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    | ||||||||||   ||||||| || |||||||||  ||||||| ||||  ||| |||||||||||| || | |||||||||||    
T  14726551 cgtcttgtgcga---tgtttgatttcgcgtcttgtcacggtgttagtttatttcttattgaaagatcggcatcagtcaatcaca 14726471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 376 - 523
Target Start/End: Complemental strand, 11977126 - 11976980
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgt--ttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccg 473  Q
    |||||| |||||||||||||||| ||| |||||||||||||| || ||||||||||  |||| ||||||| ||||||| |||| | |||||| |||| ||    
T  11977126 ttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttttttgtgatttcgtcgtctaagtgtggcgttgtattgttcg 11977027  T
Q  474 tcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgttt 523  Q
    || |||||| ||||   |||||| || ||||||||| |||||||||||||    
T  11977026 tcgtcttgtacgac---gtttgatttcgcgtcttgtcgcggtgtttgttt 11976980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 377 - 485
Target Start/End: Original strand, 6216799 - 6216907
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtca 476  Q
    ||||| |||||||||||||||| ||| |||||||||||||| ||  ||||||||||||| ||||||| ||||||| | |||| |||| |||||| ||||     
T  6216799 tttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgttttttgtgatttcgtcgtctaaatgcggcgttatgttgttcgtcg 6216898  T
Q  477 tcttgtgcg 485  Q
    |||||||||    
T  6216899 tcttgtgcg 6216907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 377 - 496
Target Start/End: Complemental strand, 19103662 - 19103543
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    ||||| || ||||||||||||||||| |||||| ||||||| || |||||  ||||||| |||||||| ||||||| ||||||||||||||||||  |||    
T  19103662 tttctttcgatctaaataagtgattttcacatacatcaagtttt-tctttcatgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttagtc 19103564  T
Q  476 atcttgtgcgacgttgtttga 496  Q
     ||||||||| ||||||||||    
T  19103563 gtcttgtgcggcgttgtttga 19103543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 431 - 559
Target Start/End: Complemental strand, 35921133 - 35921005
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcat 530  Q
    ||||||||||||| |||||||||||||||| || | |||| |||| |||| || |||||||||||| || ||||||||||||||||||  |||| ||| |    
T  35921133 tttttcgtgatttcgtcgtctgagtgcgacattatattgttcgtcgtcttatgagacgttgtttgatttcgcgtcttgttgcggtgttcatttgtttcct 35921034  T
Q  531 attgaaagatcagctttagtcaatcacag 559  Q
    ||| ||||||||  || | ||||||||||    
T  35921033 attaaaagatcaaattcaatcaatcacag 35921005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 376 - 540
Target Start/End: Complemental strand, 8096687 - 8096525
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    |||||| |||||||||||||||| ||| |||||||||||||| || ||||||||||||||  |||||||  |||||| |||||| ||||||||||| |||    
T  8096687 ttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgtttttgtgtgatttcatcgtctaagtgcggcgttgtgttgttcgt 8096588  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
      | ||| ||| |    ||||| || ||||||||| |||||||| |||| |||| |||||||||||    
T  8096587 tgttttgagcggc---atttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagat 8096525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 9113914 - 9113752
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| | |||||||||||||| ||| ||||| |||||||| ||  ||||||||||||| ||||||| ||||||| |||||| |||| |||||| ||||    
T  9113914 ttttcttttaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttctgttgttcgtc 9113815  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||||| |   |||||| ||  ||| |||| ||||||||||||  |||| | ||||||||||    
T  9113814 gtcttgtgcggc---gtttgatttcacgttttgtcgcggtgtttgttcagttcctcttgaaagatc 9113752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 376 - 541
Target Start/End: Original strand, 26825330 - 26825491
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||| | |||||||| ||  ||||||||||||| ||||||| ||| ||| |||||| ||||||||||| ||||    
T  26825330 ttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgttttt-gtgatttcgtcttctaagtgcggcgttgtgttgttcgtc 26825428  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||||| |   |||||| || |||| |||| ||||||||||||  |||| | ||||||||||    
T  26825429 ttcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatc 26825491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 320 - 554
Target Start/End: Complemental strand, 31392007 - 31391767
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctg---ttttctatcaatctaaataagtgatttccacatatat 412  Q
    ||||||||||||||||||||||||| |||| ||||||||    ||| ||| ||||||||    ||||| ||||||||||||||||| ||| ||||| |||    
T  31392007 aggaggggtggttttaggtcattttttgacctagaatcacccctctacat-ctttttctccccttttcgatcaatctaaataagtggttttcacatttat 31391909  T
Q  413 caagtgttctcttttgtgtttttc---gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgt 509  Q
    ||||| ||  ||| ||| |||||    ||||||| ||||||| |||||||||||||||||| | || ||||||||| |    ||||| || || ||||||    
T  31391908 caagtttttccttatgtatttttttttgtgatttcgtcgtctaagtgcgacgttgtgttgttcttcgtcttgtgcggc---atttgatttcgcatcttgt 31391812  T
Q  510 tgcggtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
     || |||||||||| |||  |||||||||||| || | |||||||    
T  31391811 cgcagtgtttgtttagtttttattgaaagatcggcatcagtcaat 31391767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 541
Target Start/End: Complemental strand, 7613156 - 7613053
Alignment:
Q  438 tgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
    |||||||||| |||||||| |  | |||||||| |||| |||||||| | ||||||||| ||  |||||||||||||||||  |||| ||||||||||||    
T  7613156 tgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcaatgttgtttgatttctcgtcttgttgcggtgttcatttgattcatattgaaa 7613057  T
Q  538 gatc 541  Q
    ||||    
T  7613056 gatc 7613053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 376 - 537
Target Start/End: Complemental strand, 11074089 - 11073931
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| | ||||||||||||||  || ||||| |||||||| ||  ||||||| ||||| ||||||| || |||| |||||  |||||| |||| ||||    
T  11074089 ttttcttttaatctaaataagtggctttcacatctatcaagtttttccttttgtattttttgtgatttcgttgtctaagtgcagcgttgttttgttcgtc 11073990  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
     ||||||||| |   |||||| || ||||||||| ||||||||||||  |||| ||||||||    
T  11073989 gtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaa 11073931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 443 - 554
Target Start/End: Original strand, 19120876 - 19120986
Alignment:
Q  443 ttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    ||||||| | |||||| ||||||||||| |||| |||| || | | |||||||| || |||||||||||||||||||||||| ||| | ||| |||||||    
T  19120876 ttgtcgtataagtgcggcgttgtgttgttcgtcgtcttatgaggcattgtttgatttcgcgtcttgttgcggtgtttgtttgtttccttttg-aagatca 19120974  T
Q  543 gctttagtcaat 554  Q
    |||| |||||||    
T  19120975 gcttcagtcaat 19120986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 477 - 556
Target Start/End: Complemental strand, 38111039 - 38110960
Alignment:
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||||||||||| |||||||| ||||  || |||||||||    
T  38111039 tcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttggttcctattgaaatatcaatttaagtcaatca 38110960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 250 - 430
Target Start/End: Original strand, 7035995 - 7036181
Alignment:
Q  250 tagccgactctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctga 348  Q
    |||||| | |||||||| |||||||||||| || ||||||| | |||  |||||||||| || | |  | |||| ||||||||||||||||||||| |||    
T  7035995 tagccggccctagttttctagtgagagaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggtggttttaggtcattttttga 7036094  T
Q  349 cttagaatca----tctgcattctttttc-tgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg 430  Q
    | || |||||    ||| |||  |||||| | |||||| |||||||||||||||| ||| |||||||||||| | || |||||||||    
T  7036095 cctaaaatcactcatctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatcaatttttttcttttgtg 7036181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 383 - 542
Target Start/End: Original strand, 25980064 - 25980220
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgt 482  Q
    |||| ||||||||||| |||  |||| |||| ||| ||  |||||||| |||| ||| ||| ||||||| ||||||   ||||||||| |||| ||||||    
T  25980064 tcaacctaaataagtggttttaacatctatcgagtttttccttttgtggtttttgtggtttcgtcgtctaagtgcggtattgtgttgttcgtcgtcttgt 25980163  T
Q  483 gcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    ||| ||||   | | || ||||||||| ||||||||||||| |||| |||||||||||||    
T  25980164 gcggcgtt---taatttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatca 25980220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 368 - 468
Target Start/End: Original strand, 15571377 - 15571477
Alignment:
Q  368 tttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgt 467  Q
    |||||||  ||||| |||||||||||||||| ||| |||||||||||||| ||  |||||||  |||| ||||||| ||||||| |||| | ||||||||    
T  15571377 tttttctcatttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtaatttttgtgatttcgtcgtctaagtgtggcgttgtgt 15571476  T
Q  468 t 468  Q
    |    
T  15571477 t 15571477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 506 - 558
Target Start/End: Original strand, 31364497 - 31364549
Alignment:
Q  506 ttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||||||    
T  31364497 ttgttgcggtgtttgtttggttcatattgaatgatcagctccagtcaatcaca 31364549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 377 - 540
Target Start/End: Original strand, 19349602 - 19349757
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtca 476  Q
    ||||| |||||||||| |||| |||| |||||||||||||  || |||||||| |||||        ||||||| ||||| ||  ||||||||| ||||     
T  19349602 tttctttcaatctaaacaagtaattttcacatatatcaagaattttcttttgtattttt--------tgtcgtccgagtgtgatattgtgttgttcgtcg 19349693  T
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    ||||||||| |||| ||||| ||  ||||| |||||  |||| ||||||||| |||||||||||    
T  19349694 tcttgtgcggcgttatttgatttcacgtctagttgcaatgttcgtttggttcctattgaaagat 19349757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 431 - 554
Target Start/End: Original strand, 35850753 - 35850873
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcat 530  Q
    ||||| ||||||| ||||||| ||| |||||||||||||| |||| ||||||||| |   |||||| || |||| || | |||||||||||||  ||| |    
T  35850753 ttttttgtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttatcgcggtgtttgtttatttcct 35850849  T
Q  531 attgaaagatcagctttagtcaat 554  Q
    ||||||||||| || | |||||||    
T  35850850 attgaaagatcggcatcagtcaat 35850873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 431 - 480
Target Start/End: Original strand, 40774853 - 40774902
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatctt 480  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  40774853 tttttcgtgattttgtcgtcttagtgcgacgttgttttgtccgtcgtctt 40774902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 512
Target Start/End: Complemental strand, 26510751 - 26510699
Alignment:
Q  460 cgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgc 512  Q
    ||||||||| | |||||||||||||| |||||||||| |||||||||||||||    
T  26510751 cgttgtgttattcgtcatcttgtgcgtcgttgtttgattttgcgtcttgttgc 26510699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 1582223 - 1582148
Alignment:
Q  436 cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttg 511  Q
    ||||||||  |||| ||||||||||||||||| ||  ||| ||||||||| |||||||||| ||| ||||||||||    
T  1582223 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 1582148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 1602592 - 1602667
Alignment:
Q  436 cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttg 511  Q
    ||||||||  |||| ||||||||||||||||| ||  ||| ||||||||| |||||||||| ||| ||||||||||    
T  1602592 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 1602667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 465 - 536
Target Start/End: Original strand, 30298216 - 30298287
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaa 536  Q
    |||||| |||| ||||||||| || ||||||| ||| |||||| ||||||||||| |||| |||||||||||    
T  30298216 tgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgtttatttgattcatattgaa 30298287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 383 - 542
Target Start/End: Original strand, 34881644 - 34881803
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgt 482  Q
    |||||||||||||||||||| |||||| ||| ||| || |  ||| | || || |||||||  || ||| |||| |  | | |||||| |||| ||||||    
T  34881644 tcaatctaaataagtgattttcacatagatctagtttttttcttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgt 34881743  T
Q  483 gcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    ||| |||||||||| ||  ||||||  |||||||||  |||| |||||||||||||||||    
T  34881744 gcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatca 34881803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 376 - 451
Target Start/End: Original strand, 34945321 - 34945395
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtct 451  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| ||  ||||||||||||| ||||||| |||||||    
T  34945321 ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt-gtgatttcgtcgtct 34945395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 465 - 540
Target Start/End: Complemental strand, 36344562 - 36344487
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    |||||| |||| ||||||||| |||||||||| ||| ||| || ||||||||||  |||| |||||||||||||||    
T  36344562 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtttttttgcggtgttcatttgattcatattgaaagat 36344487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 541
Target Start/End: Original strand, 31314735 - 31314789
Alignment:
Q  487 cgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||||| | || || ||||||||||||||||||||||||||||||||| ||||    
T  31314735 cgttgttttatttcgcttcttgttgcggtgtttgtttggttcatattgaatgatc 31314789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 504 - 546
Target Start/End: Original strand, 31315932 - 31315974
Alignment:
Q  504 tcttgttgcggtgtttgtttggttcatattgaaagatcagctt 546  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  31315932 tcttgttgtggtgtttgtttgattcatattgaaagatcagctt 31315974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 556
Target Start/End: Complemental strand, 41214720 - 41214646
Alignment:
Q  482 tgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    ||||| ||||||||| || ||||||| || | |||||| |||| || |||||||||||||||||||| |||||||    
T  41214720 tgcgatgttgtttgatttcgcgtcttatttccgtgtttctttgatttatattgaaagatcagctttaatcaatca 41214646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 472 - 558
Target Start/End: Complemental strand, 8985047 - 8984965
Alignment:
Q  472 cgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||| ||||||| ||| |||||||| |  ||||||||||||| |||| ||||| ||||||||    |||||||||||||||||||||    
T  8985047 cgtcgtcttgtgtgacattgtttgattccgcgtcttgttgcgctgttcgtttgtttcatatt----gatcagctttagtcaatcaca 8984965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 456
Target Start/End: Complemental strand, 26878268 - 26878190
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtg 456  Q
    |||||| |||||||||||||||| ||| |||||| ||||||| || |||||  ||||||| ||||||| ||||||| ||||    
T  26878268 ttttctttcaatctaaataagtggttttcacataaatcaagttttttcttt--tgttttttgtgatttcgtcgtctaagtg 26878190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 7887009 - 7886933
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| |||||| | || |||||||| ||| |||||| ||||||||||||| || |||||||| |||||||    
T  7887009 tgttgttcgtcgtcttgtacaacattgtttgattttccgtcttcttgcggtgtttgtctgattcatattaaaagatc 7886933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 16981298 - 16981374
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| | |||||| | ||| |||||| ||||||||||  |||| ||||||||||||||||    
T  16981298 tgttgttcgtcgtcttgtgcggcattgtttaattttccgtcttcttgcggtgttcctttgattcatattgaaagatc 16981374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 18677536 - 18677460
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||| |||||||||||| ||| ||||||  | |||||||  |||| ||||||||||||||||    
T  18677536 tgttgttcgtcgtcttgtgggacgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatc 18677460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 26578260 - 26578336
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| |||||||||||||||||||| ||  ||||||  ||| |||||  |||| ||||||||||||||||    
T  26578260 tgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaagatc 26578336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 41184511 - 41184435
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||  ||||||  || |||||| ||||| ||||||||||||||||    
T  41184511 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcgtttgattcatattgaaagatc 41184435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 537
Target Start/End: Complemental strand, 43261890 - 43261818
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
    |||||| |||| |||| ||||  ||||||||| ||| |||||| ||||||||||| |||| ||||||||||||    
T  43261890 tgttgttcgtcgtcttatgcggtgttgtttgattttccgtcttcttgcggtgtttatttgattcatattgaaa 43261818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 495
Target Start/End: Original strand, 20270813 - 20270872
Alignment:
Q  437 gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatc-ttgtgcgacgttgtttg 495  Q
    ||||||| ||||||| ||||||||||||| |||| |||| || |||||||||||||||||    
T  20270813 gtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttg 20270872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 541
Target Start/End: Complemental strand, 27576408 - 27576345
Alignment:
Q  478 cttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||||||||||||||| ||  |||||||||||||||||  |||  || |||||||||||||    
T  27576408 cttgtgcgacgttgtttgatttcccgtcttgttgcggtgttcatttattttatattgaaagatc 27576345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 451 - 552
Target Start/End: Complemental strand, 37986227 - 37986129
Alignment:
Q  451 tgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagt 550  Q
    |||||||| ||||||||||| | || ||||||||| ||||   ||| || || ||||||||||| ||| ||||| ||| ||||||||||||| |||| ||    
T  37986227 tgagtgcggcgttgtgttgttcatcgtcttgtgcggcgtt---tgatttcgcatcttgttgcggcgttcgtttgattcttattgaaagatcaacttttgt 37986131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 37425091 - 37425153
Alignment:
Q  433 tttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatc-ttgtgcgacgttgttt 494  Q
    |||||||||||||||||||  |||||||||||| ||||  ||| || ||||||||||||||||    
T  37425091 tttcgtgattttgtcgtctttgtgcgacgttgttttgtttgtcgtctttgtgcgacgttgttt 37425153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 541
Target Start/End: Complemental strand, 3271466 - 3271397
Alignment:
Q  472 cgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||| ||||||||  |||||||||| ||| ||||||  |||||||||  |||| ||||||||||||||||    
T  3271466 cgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 3271397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 539
Target Start/End: Original strand, 11192419 - 11192452
Alignment:
Q  506 ttgttgcggtgtttgtttggttcatattgaaaga 539  Q
    |||||||||||| |||||||||||||||||||||    
T  11192419 ttgttgcggtgtctgtttggttcatattgaaaga 11192452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 20146235 - 20146198
Alignment:
Q  433 tttcgtgattttgtcgtctgagtgcgacgttgtgttgt 470  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  20146235 tttcgtgattttgtcgtcttagtgcgacgttgttttgt 20146198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 542
Target Start/End: Original strand, 28235593 - 28235670
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    ||||||| ||| ||||||||| |||||||||| ||| | |||| ||||||||||  |||  ||| |||||||||||||    
T  28235593 tgttgtctgtcgtcttgtgcggcgttgtttgattttccatcttcttgcggtgttcattttattcttattgaaagatca 28235670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 475
Target Start/End: Original strand, 28386838 - 28386933
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||  ||||| |||| ||||||||||||| || | ||||   ||||| ||||||| ||||||| |||||| ||||||||||| ||||    
T  28386838 ttttctttcaatctaaccaagtggtttc-acatatatcaagttttttttttt---ttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtc 28386933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 495
Target Start/End: Complemental strand, 33486590 - 33486525
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatctt-gtgcgacgttgtttg 495  Q
    ||||| ||||||| ||||||| |||||||| |||| |||| |||| |||| |||||||||||||||    
T  33486590 ttttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttg 33486525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 2057909 - 2057833
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||| ||| |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  2057909 tgttgttcgtcgtcttgcgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 2057833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 19259882 - 19259807
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| |||||||||  ||||||||| ||  ||||||  |||||||||| |||| ||||||||||||||||    
T  19259882 tgttgttcgtcgtcttgtgcggtgttgtttga-ttcccgtcttcgtgcggtgtttatttgattcatattgaaagatc 19259807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 536
Target Start/End: Complemental strand, 20257766 - 20257695
Alignment:
Q  464 gtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaa 536  Q
    ||||||| |||| ||||||||||| || || || ||| |||||||||||||||||  |||| |||||||||||    
T  20257766 gtgttgttcgtcgtcttgtgcgacattatt-gattttccgtcttgttgcggtgttcatttgattcatattgaa 20257695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 30371734 - 30371810
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||||||||||||| |||||||||| ||  | ||||  |||||||||  |||  ||||||||||||||||    
T  30371734 tgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttaattcatattgaaagatc 30371810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 6e-51; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 377 - 558
Target Start/End: Complemental strand, 41553626 - 41553444
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||| |||| |||||||| |||||||||||| ||||    
T  41553626 tttctttcaatctaaataagggatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtc 41553527  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
     ||||||| |||||| ||||| || ||||||||||  |||||| |||||||||||||||||||||||  || |||||||||||    
T  41553526 gtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatcaca 41553444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 377 - 558
Target Start/End: Complemental strand, 41553971 - 41553789
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||| |||| |||||||| |||||||||||| ||||    
T  41553971 tttctttcaatctaaataagggatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtc 41553872  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
     ||||||| |||||| ||||| || ||||||||||  |||||| |||||||||||||||||||||||  || |||||||||||    
T  41553871 gtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatcaca 41553789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 377 - 558
Target Start/End: Complemental strand, 41554316 - 41554134
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||| |||| |||||||| |||||||||||| ||||    
T  41554316 tttctttcaatctaaataagggatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtc 41554217  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
     ||||||| |||||| ||||| || ||||||||||  |||||| |||||||||||||||||| ||||  || |||||||||||    
T  41554216 gtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaatatcaatttcagtcaatcaca 41554134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 293 - 558
Target Start/End: Original strand, 28476037 - 28476308
Alignment:
Q  293 taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatcatct-gcat-tctttttctgttttctatcaatcta 390  Q
    ||||||||||| |||||| || | |  |||||||||| |||||||||| ||| |||| |||||||| |  |||| | |||||||  ||||| ||||||||    
T  28476037 taagttttcttcctctttcacatatcgaggaggggtgattttaggtcaatttttgacctagaatcaccccgcatatttttttctcctttctttcaatcta 28476136  T
Q  391 aataagtgatttccacatatatcaagtgttctcttttgtgtttt-tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgt 489  Q
    |||||||||||| |||||| ||||||| || ||||||||||||| ||||||||| ||||||| |||||||||||||||||| |||| ||||||||| |||    
T  28476137 aataagtgattttcacatacatcaagtttt-tcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgt 28476235  T
Q  490 tgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    ||||||| || || |||| |    ||||||||| ||||||||| ||||||||||||||||| || ||||||||    
T  28476236 tgtttgatttcgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcaca 28476308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 387 - 558
Target Start/End: Complemental strand, 38880761 - 38880588
Alignment:
Q  387 tctaaataagtgatttccacatatatcaagtgttctc-ttttgtgtttt-tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgc 484  Q
    ||||||||||||| || ||  |||||||||| || || ||||||||||| ||||||||| ||||| ||||||||||||||||||||  | | |||||| |    
T  38880761 tctaaataagtgaatttcaggtatatcaagttttttccttttgtgttttctcgtgatttcgtcgtatgagtgcgacgttgtgttgtttgccgtcttgtac 38880662  T
Q  485 gacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||| ||||||| ||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  38880661 gacgctgtttgattttgcatcttgttgcggtgttcgtttggttcttattgaaagatcagcttcagtcaatcaca 38880588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 320 - 541
Target Start/End: Complemental strand, 37837708 - 37837485
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaa 415  Q
    ||||||||||||||||||||||||| |||| ||||||||    ||| |||  ||||||  |||||| |||||||||||||||| ||| ||||||||| ||    
T  37837708 aggaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttttcccttttctttcaatctaaataagtggtttacacatatattaa 37837609  T
Q  416 gtgttctcttttgtgt-ttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcgg 514  Q
    || || |||||||||| |||| |||||||  || ||| |||||| ||||||||||| |||| ||||||||| |   |||||| |||||||||||| ||||    
T  37837608 gttttttcttttgtgtttttttgtgatttcatcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgcgtcttgtcgcgg 37837512  T
Q  515 tgtttgtttggttcatattgaaagatc 541  Q
    |||| |||| |||| ||||||||||||    
T  37837511 tgttcgtttagttcctattgaaagatc 37837485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 261 - 541
Target Start/End: Original strand, 47590095 - 47590375
Alignment:
Q  261 agttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca- 358  Q
    |||||||||||||||||||||||||||||| | ||| ||||||||||| ||   |  |  |||||||||| |||||||||||||| |||  ||||||||     
T  47590095 agttttttagtgagagaaattccaacttctctctaaattttctttctcattcgttcatagaggaggggtgattttaggtcatttt-tgaactagaatcac 47590193  T
Q  359 ---tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagt 455  Q
       ||| |||| ||||||  | |||| |||||||||||||||| ||| |||||||||||||| ||  ||||||||||||| ||||||| || |||| |||    
T  47590194 ccctctacatt-tttttccctattctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgttttttgtgatttcgttgtctaagt 47590292  T
Q  456 gcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||| ||||||||||| |||| ||||||||| |   |||||| |||||||||||  ||||||||||| |  ||| ||||||||||||    
T  47590293 gcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgcgtcttgccgcggtgtttgtataattcctattgaaagatc 47590375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 245 - 546
Target Start/End: Complemental strand, 24351169 - 24350859
Alignment:
Q  245 acaagtagccgactctagttttttagtgagagaaattccaacttct-tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattt 343  Q
    |||| |||||||| ||| ||||||||||||||||| ||   ||||| ||||||||||||| |||| | |||  |  |||||||||| |||||||||| ||    
T  24351169 acaaatagccgaccctaattttttagtgagagaaactctgtcttctctttaagttttcttcctctctcactcatcgaggaggggtgattttaggtcaatt 24351070  T
Q  344 tctgacttagaatcatc----tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttc-gt 438  Q
    | |||| |||||||| |    ||||| ||||||    ||||| |||||||||||||||||||| |||||| ||||||| || ||||| ||||||||  ||    
T  24351069 tttgacctagaatcacccctgtgcatccttttttccctttctttcaatctaaataagtgattttcacatacatcaagtttt-tctttcgtgttttttagt 24350971  T
Q  439 gattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattg 534  Q
    ||||| ||||||| |||||||||||||||||| |||| ||||||||| |||||||||| ||  | | || |    ||| ||||| ||||||||| |||||    
T  24350970 gatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcacattttttgttgtgcagtgttcgtttggttcgtattg 24350871  T
Q  535 aaagatcagctt 546  Q
    ||||||||||||    
T  24350870 aaagatcagctt 24350859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 260 - 558
Target Start/End: Original strand, 3394253 - 3394557
Alignment:
Q  260 tagttttttagtgagagaaattccaactt-cttttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca 358  Q
    ||||||||||||||||||||||||||||| |   |||||| ||||||| ||| |||  || ||||| |||||||||| ||||||||  ||| || |||||    
T  3394253 tagttttttagtgagagaaattccaactttccactaagttctctttctttttcactctttgaggagtggtggttttacgtcatttttggacatataatca 3394352  T
Q  359 tctgcat---tctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagt 455  Q
     ||   |   ||||||||   ||||| || ||||||||||||||||| ||| ||||| |||| || |||| ||| || ||||||||||  ||||||||||    
T  3394353 cctatttgtatctttttcccctttctttcgatctaaataagtgattttcacgtatatgaagttttttcttgtgttttcttcgtgatttcatcgtctgagt 3394452  T
Q  456 gcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatt--tgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaa 553  Q
    |||  |||||||||| |||| ||||||| |  ||||||||| ||  || ||||| ||||||||||||||| | |||||||||| ||||| ||| ||||||    
T  3394453 gcggtgttgtgttgttcgtcgtcttgtgtggtgttgtttgatttcgtgtgtcttcttgcggtgtttgtttagatcatattgaatgatcaacttcagtcaa 3394552  T
Q  554 tcaca 558  Q
    |||||    
T  3394553 tcaca 3394557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 320 - 554
Target Start/End: Original strand, 48061263 - 48061499
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatcatc----tgcattctttttctg--ttttctatcaatctaaataagtgatttccacatatatc 413  Q
    ||||| ||||||||||||||||||| ||||||||||||| |    | |||  ||||||    |||||| |||||||||||||||| ||| ||||| ||||    
T  48061263 aggagaggtggttttaggtcattttttgacttagaatcaccccactacatattttttcccctttttctttcaatctaaataagtggttttcacatctatc 48061362  T
Q  414 aagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcg 513  Q
    |||| || |||||||||||||| ||||||| ||||||| |||||| | || |||||| |||| |||| ||||||   |||||| |||||||||||| |||    
T  48061363 aagttttttcttttgtgttttt-gtgatttcgtcgtctaagtgcggcattttgttgttcgtcgtcttatgcgac---gtttgattttgcgtcttgtcgcg 48061458  T
Q  514 gtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
    |||||||||| |||| ||||||||||||  | |||||||||    
T  48061459 gtgtttgtttagttcctattgaaagatctacattagtcaat 48061499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 377 - 559
Target Start/End: Complemental strand, 24069587 - 24069403
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgt--ttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    ||||| || ||||| ||||||||||||||||  ||| |||| || ||||||||||  ||||||||||||  ||||||||||||| ||||||||||| |||    
T  24069587 tttctttcgatctatataagtgatttccacacgtataaagttttttcttttgtgtctttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgt 24069488  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
      ||||||||| |||| ||||| || |||| ||||||||||||| ||||| |||||||||||| ||||||||   ||||||||||    
T  24069487 tgtcttgtgcggcgttttttgatttggcgtattgttgcggtgttcgtttgattcatattgaaatatcagcttcgatcaatcacag 24069403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 259 - 541
Target Start/End: Complemental strand, 30757131 - 30756846
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||||||||||||| |||||| | |||||||| | ||| ||||||||||||||   |  |  ||||||||||||||||||| ||||| |||| |||||||    
T  30757131 ctagttttttagtgggagaaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggtggttttaggtaattttttgacctagaatc 30757032  T
Q  358 a----tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctg 452  Q
    |    ||| |||  ||||||   |||||| |||||||||||||||||||| ||||| ||||| || ||  ||||||||||||| ||||||| |||||||     
T  30757031 acccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatcatgtttttccttttgtgttttttgtgatttcgtcgtcta 30756932  T
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| ||||||||||| |||| ||||||||| |   |||||| || |||| |||| ||||||||||||  |||  ||||||||||||    
T  30756931 agtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagtttctattgaaagatc 30756846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 389 - 554
Target Start/End: Complemental strand, 969630 - 969461
Alignment:
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtgttttt----cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgc 484  Q
    |||||||||||||| ||||||||  |||| || |||| ||| |||||    ||||||||  |||| ||| || | ||||||||||| |||| |||| |||    
T  969630 taaataagtgattttcacatataataagttttttcttgtgttttttttcttcgtgatttcatcgtttgaatgtggcgttgtgttgttcgtcgtcttttgc 969531  T
Q  485 gacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
    | |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||    
T  969530 ggcgttgtttgattttgcgtcttattgcggtgtttgtttggttcatattgaaaaatcatctttagtcaat 969461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 377 - 547
Target Start/End: Original strand, 27996991 - 27997161
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtca 476  Q
    ||||| |||||||||||||  ||||| ||||||||||||   |||| || | | ||||| || |||| |||||||||||||| | ||||||||| |||||    
T  27996991 tttctttcaatctaaataatagattttcacatatatcaaaacttcttttattttttttttgttatttcgtcgtctgagtgcggcattgtgttgttcgtca 27997090  T
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagcttt 547  Q
    |||||||| || |||||| | ||||| ||||||||| ||||| ||||| ||||||||||||||||| ||||    
T  27997091 tcttgtgcaacattgttttattttgcatcttgttgcagtgttcgtttgattcatattgaaagatcaacttt 27997161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 2242927 - 2242838
Alignment:
Q  45 ggataaaacacaatcttgccattgaacaagatttctagttaaaa-cataaacataattaagaacttcatttgaacaattgattaacctca 133  Q
    |||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| |||||| |||||||||||    
T  2242927 ggataaaacacaatcttgccattgaacaagatttttaattaaaaacataaacataattaagaacttcatttcaacaatggattaacctca 2242838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 327 - 541
Target Start/End: Complemental strand, 34899850 - 34899634
Alignment:
Q  327 gtggttttaggtcattttctgacttagaatca----tctgcat-tctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttc 421  Q
    |||||||||||||||||| |||| ||||||||    ||| ||| | ||||||  |||||| |||||||||||||||| ||| ||||| |||||||| ||     
T  34899850 gtggttttaggtcattttttgacctagaatcacccctctacatctttttttcccttttctttcaatctaaataagtggttttcacatctatcaagttttt 34899751  T
Q  422 tcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgt 521  Q
     ||||||||||||| ||||||| ||||||| |||||| ||||||||||| |||| ||||||||| |   |||||| || || | |||| |||||||||||    
T  34899750 ccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgctttttgtcgcggtgtttgt 34899654  T
Q  522 ttggttcatattgaaagatc 541  Q
    |  |||| | ||||||||||    
T  34899653 tcagttcctcttgaaagatc 34899634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 259 - 540
Target Start/End: Original strand, 25067865 - 25068147
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||| ||||| | || |  || | | ||||||||| ||||| || |||| | |||||    
T  25067865 ctagttttttagtgagagaaactccaccttctcactaagttttctttttctttcatttatcgagaatgagtggttttatgtcatcttttgaccttgaatc 25067964  T
Q  358 atc----tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctg 452  Q
    | |    ||||| |||||||| ||| || |||||||||||||||||||||||||||||  |||| || ||||||||| ||||| |||||||  || ||||    
T  25067965 acccatttgcatcctttttctattt-ctttcaatctaaataagtgatttccacatata--aagtctt-tcttttgtgcttttttgtgatttcatcatctg 25068060  T
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    |||||| ||||||||||| ||||  ||||||||  ||| ||| | ||||| ||||||||||||||| |||| |||| |||||||||||    
T  25068061 agtgcggcgttgtgttgttcgtc-gcttgtgcggtgtttttttattttgcatcttgttgcggtgttcgttttgttcctattgaaagat 25068147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 377 - 542
Target Start/End: Complemental strand, 26623978 - 26623816
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtca 476  Q
    ||||| ||||| |||||||||  ||| |||| ||||||||| ||   |||| ||||||| |||||||  ||||||||||||| ||||||||||| ||||     
T  26623978 tttctttcaatttaaataagttgtttacacacatatcaagtttttcattttatgttttttgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcg 26623879  T
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    |||||| || ||||   ||| ||||| ||||||||||||||||||||||||| |||||||||||||    
T  26623878 tcttgtacggcgtt---tgattttgcatcttgttgcggtgtttgtttggttcctattgaaagatca 26623816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 319 - 541
Target Start/End: Complemental strand, 48317063 - 48316839
Alignment:
Q  319 aaggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctg--ttttctatcaatctaaataagtgatttccacatatat 412  Q
    ||||||||||||||||||||||||||  ||| ||||||||    ||| ||| |||||||    |||||| ||||| |||||||||| ||| ||||| |||    
T  48317063 aaggaggggtggttttaggtcatttttggacctagaatcacccctctacat-ctttttcccccttttctttcaatttaaataagtggttttcacatctat 48316965  T
Q  413 caagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgc 512  Q
    ||| | || |||||||||||||| ||||||| ||||||| ||| || ||||||||||| |||| ||||||||  |   |||||| || ||||||||| ||    
T  48316964 caaattttttcttttgtgttttttgtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcagc---gtttgatttcgcgtcttgtcgc 48316868  T
Q  513 ggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||||||  |||| ||||||||||||    
T  48316867 ggtgtttgttcagttcctattgaaagatc 48316839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 376 - 485
Target Start/End: Original strand, 40993084 - 40993193
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| ||  ||||||||||||| ||||||| ||||||| |||||| ||||||||||| ||||    
T  40993084 ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtc 40993183  T
Q  476 atcttgtgcg 485  Q
    ||||||||||    
T  40993184 atcttgtgcg 40993193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 260 - 557
Target Start/End: Complemental strand, 3224728 - 3224421
Alignment:
Q  260 tagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca 358  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||||||||||| |||  |  | || |||||||||||||||||||| |  | ||||||||    
T  3224728 tagttttttagtgagagaaattccaacttttttctaaattttctttctctttcactcttcgaagatgggtggttttaggtcatttt-tatcatagaatca 3224630  T
Q  359 ----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgt------gattttgtcg 448  Q
        ||  |||  ||||||| |||||| |  || |||||||  |||| ||||  |||||||||||| | ||||||||||||| |      ||||| ||||    
T  3224629 ctcctcaacatcttttttctcttttcttttgatttaaataaccgattaccactgatatcaagtgttttgttttgtgtttttcttcttcatgatttcgtcg 3224530  T
Q  449 tctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagcttta 548  Q
    |||||| ||   |||||||||| |||  ||||||||||| || ||||| ||  ||| |||||||| |||| ||||||||||||||||| ||||| ||| |    
T  3224529 tctgagggctgtgttgtgttgttcgtagtcttgtgcgacattatttgatttcacgttttgttgcgatgttcgtttggttcatattgaaggatcaacttca 3224430  T
Q  549 gtcaatcac 557  Q
    |||||||||    
T  3224429 gtcaatcac 3224421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 377 - 558
Target Start/End: Original strand, 22742840 - 22743025
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt-tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    ||||| |||||||||||||||||||| |||||| ||||||| || ||||| || |||| ||||||||| ||||||| ||| |||||||||||||| ||||    
T  22742840 tttctttcaatctaaataagtgattttcacatacatcaagtttt-tctttcgttttttttcgtgatttcgtcgtcttagttcgacgttgtgttgttcgtc 22742938  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtctt--gt--tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
     ||||||||| |||||||||| ||  | | ||  ||  ||||| ||| ||||||||| ||||||||||||||||| || ||||||||    
T  22742939 gtcttgtgcggcgttgtttgatttcacatttttagttgtgcggcgttcgtttggttcgtattgaaagatcagcttcagccaatcaca 22743025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 320 - 541
Target Start/End: Original strand, 42978449 - 42978674
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctg---ttttctatcaatctaaataagtgatttccacatatat 412  Q
    ||||||||||||||||||||||||| |||| ||||||||    ||| ||| ||||||||    ||||| ||||||||||||||||| ||| |||||||||    
T  42978449 aggaggggtggttttaggtcattttttgacctagaatcaccactctacat-ctttttctccccttttcgatcaatctaaataagtggttttcacatatat 42978547  T
Q  413 caagtgttctcttttgtgtt-tttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttg 511  Q
     |||| ||  |||||||||| ||| ||||||| ||||||| |||||| ||||||||||| |||| ||||||||| |   |||||| ||  ||| || | |    
T  42978548 aaagtttttccttttgtgttcttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttctcgttttatcg 42978644  T
Q  512 cggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||| |||| |||| ||||||||||||    
T  42978645 cggtgttcgtttagttcttattgaaagatc 42978674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 293 - 558
Target Start/End: Complemental strand, 1749418 - 1749157
Alignment:
Q  293 taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatcatctgcat--tctttttctgttttctatcaatcta 390  Q
    ||||||||||| |||||| |||  |  |||||||||| |||||||||| ||| |||| |||||||| | || |  |||||||    ||||| ||||||||    
T  1749418 taagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacccgcttcatcttttttccctttctttcaatcta 1749319  T
Q  391 aataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgtt 490  Q
    |||||||||||| |||||| ||||||| ||          | ||||||||||| ||||||| |||||||||||||||||| |||| ||||||||| | ||    
T  1749318 aataagtgattttcacatacatcaagtttt----------tctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcatt 1749229  T
Q  491 gtttgaatttgcgtc--ttgttg--cggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||||| || || ||  ||||||  || |||| ||||||||| ||||||||||||||||| || ||||||||    
T  1749228 gtttgatttcgcatcctttgttgtacgatgttcgtttggttcgtattgaaagatcagcttcagacaatcaca 1749157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 322 - 541
Target Start/End: Complemental strand, 12141556 - 12141335
Alignment:
Q  322 gaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctat--caatctaaataagtgatttccacatatatcaa 415  Q
    ||||||||||||||||||||||| |||| ||||||||    ||| |||  ||||||  |||| |||  ||||||||||||||| ||| ||||| ||||||    
T  12141556 gaggggtggttttaggtcattttttgacatagaatcacccctctacatcttttttcccttttttatttcaatctaaataagtggttttcacatctatcaa 12141457  T
Q  416 gtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggt 515  Q
    || || |||||||||||||| ||||||| ||||||| |||||| |||| ||||||  ||| ||||||||| |    ||||| || |||||||||  ||||    
T  12141456 gttttttcttttgtgttttt-gtgatttcgtcgtctaagtgcggcgttttgttgtttgtcgtcttgtgcggc---atttgatttcgcgtcttgtcacggt 12141361  T
Q  516 gtttgtttggttcatattgaaagatc 541  Q
    |||||||| |||| ||||| ||||||    
T  12141360 gtttgtttagttcctattggaagatc 12141335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 541
Target Start/End: Complemental strand, 9450445 - 9450164
Alignment:
Q  263 ttttttagtgagagaaattccaacttctttt-aagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca--- 358  Q
    |||| |||||||||||| ||||||||||||| ||  |||||||||| ||   |  |  ||||||| ||||||||||||||||| |||| ||||||||       
T  9450445 ttttctagtgagagaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggatggttttaggtcattttttgacctagaatcaccc 9450346  T
Q  359 -tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtgttctc-ttttgtgtttttcgtgattttgtcgtctgagt 455  Q
     ||| |||  | ||||   |||||| |||||||||||||||||||| ||||| |||| ||| ||||| |||||||||||| ||||||| ||||||| |||    
T  9450345 atctacatcttgtttccccttttctttcaatctaaataagtgattttcacatctatctagt-ttctccttttgtgttttttgtgatttcgtcgtctaagt 9450247  T
Q  456 gcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    | | ||||||||||| |||| ||||||||| |   |||||| || || | |||| ||||||||||||  |||| ||||||||||||    
T  9450246 gtggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatc 9450164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 259 - 541
Target Start/End: Complemental strand, 13797243 - 13796956
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttct-tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||||||| |||||||||||| | |||||||| ||||| ||||||||||| ||   |  |  |||| || ||||||||||||||||| | || |||||||    
T  13797243 ctagttttctagtgagagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggatggttttaggtcattttttaacctagaatc 13797144  T
Q  358 a----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctga 453  Q
    |    ||| |||  |||| |  |||||| ||||| ||||||||||||||  |||| |||||||| ||  |||||||||||||  |||||| ||||||| |    
T  13797143 acccctctacatctttttccccttttctttcaatttaaataagtgattttaacatctatcaagtttttccttttgtgttttttatgatttcgtcgtctaa 13797044  T
Q  454 gtgcgacgttgtgttgtcc---gtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||| ||||||||||| |   || ||||||||||||   |||||| || | |||||||  ||||||| |||| |||||||||||||||||    
T  13797043 gtgcggcgttgtgttgttcgttgtgatcttgtgcgac---gtttgatttcgtgtcttgtctcggtgttcgtttagttcatattgaaagatc 13796956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 377 - 540
Target Start/End: Original strand, 11343700 - 11343873
Alignment:
Q  377 tttctatcaatctaaataagtgatttcca-catatatcaagtgttctcttttgtgtttt-tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    ||||| ||||||||||||||||||||  | ||| |||||| | || ||||||||||||| ||||||||| || ||||||||||| ||||||||||| |||    
T  11343700 tttctttcaatctaaataagtgatttttaacatctatcaaatattttcttttgtgttttttcgtgatttcgttgtctgagtgcggcgttgtgttgttcgt 11343799  T
Q  475 --------catcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
            | |||||| ||| |||||| ||  | ||||||||||||||||||||||||||||||||||||||||    
T  11343800 cgaatcgccgtcttgttcgatgttgttcgagctcgcgtcttgttgcggtgtttgtttggttcatattgaaagat 11343873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 260 - 540
Target Start/End: Complemental strand, 19405065 - 19404785
Alignment:
Q  260 tagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca 358  Q
    |||||||||||||||||||| |||||||||| | ||| | ||||||||| || | |  || || |||||||||||||||||||||| |||| ||||||||    
T  19405065 tagttttttagtgagagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggtggttttaggtcattttttgacctagaatca 19404966  T
Q  359 ----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgag 454  Q
        ||| |||  |||||   |||||| |||||||||||||||| ||| |||||| ||||||| ||  ||||  || |||| ||||||| ||||||| ||    
T  19404965 cccctctacatctttttttccttttctttcaatctaaataagtggttttcacataaatcaagtttttccttt--tgattttagtgatttcgtcgtctaag 19404868  T
Q  455 tgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    |||| |||| | |||| |||| |||||||   | | |||||| ||||| |||||| ||||||||  ||| |||| | |||||||||    
T  19404867 tgcggcgttctattgttcgtcgtcttgtg---catcgtttgattttgcatcttgtcgcggtgttcttttagttcctcttgaaagat 19404785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 377 - 556
Target Start/End: Complemental strand, 35665320 - 35665147
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtca 476  Q
    ||||| || |||||||||||||||||| | ||||||||| |||| ||||||||||       ||||||||||  ||||||||  |||||||| | ||||     
T  35665320 tttctttcgatctaaataagtgatttcgaaatatatcaaatgttttcttttgtgt-------gattttgtcgggtgagtgcgttgttgtgttattcgtcg 35665228  T
Q  477 tcttgtgcgacgttgtttgaatttgcgtc-ttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    | |||||||||||||||||| || ||||| |||||||||| || ||||| ||||||| ||||||||| ||| |||| ||||    
T  35665227 ttttgtgcgacgttgtttgatttggcgtctttgttgcggtattcgtttgattcatatcgaaagatcaacttcagtcgatca 35665147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 445 - 558
Target Start/End: Original strand, 5775174 - 5775286
Alignment:
Q  445 gtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagc 544  Q
    |||||||||||||| ||||||||||| | || |||| |||| | || ||||| || |||||||||||| ||| ||||||||||||||| ||||||||||     
T  5775174 gtcgtctgagtgcggcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtg-ttgtttggttcatatcgaaagatcaga 5775272  T
Q  545 tttagtcaatcaca 558  Q
    || |||||||||||    
T  5775273 ttcagtcaatcaca 5775286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 324 - 558
Target Start/End: Original strand, 24770100 - 24770327
Alignment:
Q  324 ggggtggttttaggtcattttctgacttagaatcatc----tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgt 419  Q
    |||||| |||||||||||||| |||||||||||||||    | |||  ||||| | |||||| |||||||||||||||| ||| |||||||||||| |      
T  24770100 ggggtgattttaggtcattttatgacttagaatcatccatctacatcttttttttcttttctttcaatctaaataagtggttttcacatatatcaaat-- 24770197  T
Q  420 tctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgttt 519  Q
        |||| | ||||  ||||||| ||||||| ||||||  |||||||||| |||| |||| ||||||   |||||| || | ||||||| ||||||||     
T  24770198 ----ttttttctttt--gtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgac---gtttgatttcgtgtcttgtcgcggtgttc 24770288  T
Q  520 gtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    ||||  ||| |||||||||||| || | |||||||||||    
T  24770289 gtttatttcttattgaaagatcggcatcagtcaatcaca 24770327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 263 - 435
Target Start/End: Complemental strand, 5078701 - 5078526
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca--- 358  Q
    ||||||||||||||||| | |||||||| | |||||| ||||| ||||| |||  ||||||| ||||| |||||||||||||| |||| ||||||||       
T  5078701 ttttttagtgagagaaacttcaacttctctctaagttctctttatctttcactcattaaggaagggtgattttaggtcattttttgacctagaatcaccc 5078602  T
Q  359 -tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt 435  Q
     |||||| ||||| |||   || | || |||||||||||||||||  ||||||||||||| || ||||||||||||||    
T  5078601 ctctgca-tctttctctccattatttcgatctaaataagtgatttttacatatatcaagt-ttttcttttgtgttttt 5078526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 357 - 554
Target Start/End: Complemental strand, 39329001 - 39328804
Alignment:
Q  357 catctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgt---ttttcgtgattttgtcgtctga 453  Q
    |||||||||  ||||||  |||||| ||||| |||||||||| ||| |||| ||||||||| || |||||| | |   |||| ||||||| ||||||| |    
T  39329001 catctgcatcttttttcccttttctttcaatttaaataagtggttttcacacatatcaagttttttcttttttttctttttttgtgatttcgtcgtctaa 39328902  T
Q  454 gtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaa 553  Q
    || || ||||||||||| |||| ||||||||| |   |||||| || |||| |||| |||||||||||||  ||| |||||||||||| || | ||||||    
T  39328901 gtacggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaa 39328805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 325 - 556
Target Start/End: Original strand, 11653726 - 11653962
Alignment:
Q  325 gggtggttttaggtcattttctgacttagaatcatc----tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgtt 420  Q
    |||||| ||||||| ||||| |||| ||||||||||    |||||| ||||| | |||| |   |||||||||||||||||| ||||||||  |||| ||    
T  11653726 gggtggctttaggttattttttgacctagaatcatccatctgcattttttttttatttttttaaaatctaaataagtgattttcacatata--aagtttt 11653823  T
Q  421 c-tcttttgtg-tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcga-cgttgtttgaatttgcgtcttgttgcggtgt 517  Q
      | ||||||| ||||||||||||| |||||||||||  ||||||||||||| |||| ||||| | || | || ||||| || ||||||||| | ||||     
T  11653824 tattttttgtgctttttcgtgatttcgtcgtctgagtatgacgttgtgttgttcgtcgtcttgcgagacctttttttgatttcgcgtcttgtagtggtgc 11653923  T
Q  518 ttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    | |||| |||  |||||||||||||  ||||||||||||    
T  11653924 tcgttttgtttctattgaaagatcaattttagtcaatca 11653962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 293 - 554
Target Start/End: Original strand, 22087131 - 22087394
Alignment:
Q  293 taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatcatctgcattctttttctgttttctatcaatctaaa 392  Q
    ||||||||||||||| || | || |  | ||||| ||||||| ||||||||| |||| ||||||||  ||||| |||||||   ||||| ||||| ||||    
T  22087131 taagttttctttctccttcatttatcgaagagggatggtttttggtcattttttgacctagaatcacgtgcat-ctttttcccctttctttcaatttaaa 22087229  T
Q  393 taagtgatttccacatatatcaagtgttctcttttgtgtttttc------gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcga 486  Q
    |||||| | | |||| ||||||| |  |   ||||||||||||       |||||||  ||||||| |||||||||||||||||||||  |||||| |||    
T  22087230 taagtggtgttcacacatatcaaattctacattttgtgttttttttgtttgtgatttcatcgtctgggtgcgacgttgtgttgtccgttgtcttgtacga 22087329  T
Q  487 cgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
       ||||||| || | |||||||||| ||||||||||| | | ||||||||||||| ||| |||||||    
T  22087330 ---tgtttgatttcgtgtcttgttgctgtgtttgtttgatacctattgaaagatcaacttcagtcaat 22087394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 389 - 458
Target Start/End: Complemental strand, 26610921 - 26610852
Alignment:
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcg 458  Q
    |||||||||| |||||||||||||||||| |||  |||||||||||| ||||||| ||||||||||||||    
T  26610921 taaataagtggtttccacatatatcaagttttccattttgtgttttttgtgatttcgtcgtctgagtgcg 26610852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 293 - 558
Target Start/End: Original strand, 35132765 - 35133028
Alignment:
Q  293 taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatc 388  Q
    ||||||||||| |||||| |||  |  |||||||||| |||||||||| ||| |||| ||||||||    ||| |||  ||||||   ||||| | ||||    
T  35132765 taagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacccctctacatcttttttcccctttcttttaatc 35132864  T
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacg 488  Q
    |||||||||||||| |||||| ||||||| ||          | ||||||||||| ||||||| |||||||||||||||||| |||| |||||| || ||    
T  35132865 taaataagtgattttcacatacatcaagtttt----------tctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgttcggcg 35132954  T
Q  489 ttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||||||| ||  | || | |    || |||||| ||||||||| ||||||||||||| ||| || ||||||||    
T  35132955 ttgtttgatttcacatcctttattgtgtggtgttcgtttggttcgtattgaaagatcaacttcagacaatcaca 35133028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 385 - 559
Target Start/End: Original strand, 39228926 - 39229096
Alignment:
Q  385 aatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgc 484  Q
    |||||||||||||| ||| |||| ||||||||  ||   |||||||||||| ||||||| || |||||||||||  |||||||||| |||| ||||||||    
T  39228926 aatctaaataagtggttttcacacatatcaagactttcattttgtgttttttgtgatttcgttgtctgagtgcgttgttgtgttgttcgtcgtcttgtgc 39229025  T
Q  485 gacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    | |   ||| || || ||||||||||| | || | ||||||||  ||||||||||||| ||| ||||||| ||||    
T  39229026 ggc---gttagatttcgcgtcttgttgtgatg-tcgtttggtttctattgaaagatcaacttcagtcaattacag 39229096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 404 - 541
Target Start/End: Original strand, 19296800 - 19296934
Alignment:
Q  404 cacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcg 503  Q
    ||||| |||||||| ||  ||||||||||||| ||||||| ||||||| |||||| ||||||||||| |||| ||||||||| |   |||||| || ||     
T  19296800 cacatctatcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgca 19296896  T
Q  504 tcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    | |||| ||||||||||||  |||| | ||||||||||    
T  19296897 ttttgtcgcggtgtttgttcagttcctcttgaaagatc 19296934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 376 - 487
Target Start/End: Complemental strand, 25287375 - 25287264
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| | |||||||||||||||||| ||| ||||| |||| ||   |||| ||||||| |||||||||| |||| |||| | ||||||||||| ||||    
T  25287375 ttttcttttaatctaaataagtgattttcacgtatattaagtttttctttttatgttttttgtgattttgttgtctaagtgtggcgttgtgttgttcgtc 25287276  T
Q  476 atcttgtgcgac 487  Q
     |||||||||||    
T  25287275 gtcttgtgcgac 25287264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 463 - 542
Target Start/End: Complemental strand, 32522000 - 32521921
Alignment:
Q  463 tgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    |||||||| |||||||||||||| |||||||||| ||| ||| |||||| ||||||  |||| |||||||||||||||||    
T  32522000 tgtgttgttcgtcatcttgtgcggcgttgtttgattttccgttttgttgtggtgttcatttgattcatattgaaagatca 32521921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 321 - 540
Target Start/End: Complemental strand, 45350051 - 45349827
Alignment:
Q  321 ggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaag 416  Q
    |||||| ||||||||||||||||| |||| ||||||||    ||| | |  ||||||  |||||| ||||| |||||||||| ||| ||| |||| || |    
T  45350051 ggagggttggttttaggtcattttttgacctagaatcacccatctacttcttttttcctttttctttcaatttaaataagtggttttcacgtataccagg 45349952  T
Q  417 tgttctcttttgtgtttttc----gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgc 512  Q
    | || ||||||||||||||     ||||||| ||||||| |||| | ||||||||||| |||| | ||||| | ||||   ||| || ||||||||| ||    
T  45349951 ttttttcttttgtgttttttttctgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgttttgtgtggcgtt---tgatttcgcgtcttgtcgc 45349855  T
Q  513 ggtgtttgtttggttcatattgaaagat 540  Q
    |||||| |||| |||| |||||||||||    
T  45349854 ggtgttcgtttagttcctattgaaagat 45349827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 259 - 542
Target Start/End: Complemental strand, 5348895 - 5348618
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttctttt-aagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    ||||||||||||||| ||||| | || |||||||| |||||||||||||| |||| |  |  ||||| |||| |||||||| | ||| |||| |||||||    
T  5348895 ctagttttttagtgaaagaaacttcatcttctttttaagttttctttctcctttattcatcgaggagaggtg-ttttaggtaagtttttgacctagaatc 5348797  T
Q  358 atctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgc 457  Q
    | |     |||||||   |||||| ||||| |||||||||||||| ||||  | |||||| || || || ||| |||| ||||||| |||||||||||||    
T  5348796 acccctcatcttttttccttttctttcaatttaaataagtgattttcacacgtttcaagtttt-tcatt-gtgctttt-gtgatttcgtcgtctgagtgc 5348700  T
Q  458 gacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
     || ||||||||| |||  | |||||||    ||||||| ||  |||||| |||||||||| ||||||||| |||||||||||||    
T  5348699 aacattgtgttgttcgttgttttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttggttcctattgaaagatca 5348618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 377 - 554
Target Start/End: Complemental strand, 44311985 - 44311806
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttc---gtgattttgtcgtctgagtgcgacgttgtgttgtccg 473  Q
    ||||| |||||||||||||||| |||||||||||| |||   || || | ||| ||||||   |||||||  ||||||||||||| |||||| |||| ||    
T  44311985 tttctttcaatctaaataagtggtttccacatataccaaactttttcctgtgtttttttcttcgtgatttcatcgtctgagtgcgtcgttgtattgttcg 44311886  T
Q  474 tcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
    || |||| ||||||||||||||| ||  | | ||||||  || |||||||||||  |||| ||||||| |||| |||||||    
T  44311885 tcgtcttctgcgacgttgtttgatttcacattttgttg-tgtatttgtttggtttctattaaaagatcggcttaagtcaat 44311806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 291 - 507
Target Start/End: Complemental strand, 38051345 - 38051125
Alignment:
Q  291 tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaa 386  Q
    |||||||| |||||||  || |||  ||||||||||||||||||||||||| || | || ||||||||    ||| ||| | |||||   ||||| | ||    
T  38051345 tttaagttctctttcttcttcactcattaaggaggggtggttttaggtcatattttaacctagaatcacccatctacat-cattttcccctttcttttaa 38051247  T
Q  387 tctaaataagtgatttccacatatatcaagtgttctcttttgtgtt-tttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcg 485  Q
    |||||||| ||| |||| | ||||||||||| || | ||||||||| |||| |||||| ||| | ||| ||||| |||||||||| |||| ||||||||     
T  38051246 tctaaatatgtggtttcaatatatatcaagtttttttttttgtgttatttcatgatttcgtcatttgaatgcgatgttgtgttgttcgtcgtcttgtgca 38051147  T
Q  486 acgttgtttgaatttgcgtctt 507  Q
    || ||| |||| ||| ||||||    
T  38051146 acattgcttgatttttcgtctt 38051125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 554
Target Start/End: Original strand, 38798747 - 38798858
Alignment:
Q  440 attttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaaga 539  Q
    |||||||||||| ||| |||||||||||||| |||| ||||||||| |   |||||| ||||||| |||| || ||||||||||  ||| ||||||||||    
T  38798747 attttgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgcgttttgtcgcagtgtttgtttatttcctattgaaaga 38798843  T
Q  540 tcagctttagtcaat 554  Q
    || || | |||||||    
T  38798844 tcggcatcagtcaat 38798858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 541
Target Start/End: Complemental strand, 3267383 - 3267239
Alignment:
Q  394 aagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtt 493  Q
    ||||||||| ||||| |||||||| || ||||||||| ||||  ||| || |||  || |||||| |||| |||||| |||| |||||||||||   |||    
T  3267383 aagtgattttcacatctatcaagttttttcttttgtggtttttttgacttcgtcacctaagtgcggcgttttgttgttcgtcgtcttgtgcgac---gtt 3267287  T
Q  494 tgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||| || ||||||| |  ||||||| ||||  ||||||||||||||||    
T  3267286 tgatttcgcgtcttatcacggtgttcgtttaattcatattgaaagatc 3267239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 431 - 496
Target Start/End: Original strand, 48930723 - 48930788
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttga 496  Q
    |||||| |||||| ||||||| |||||||||||||||| | |||| ||||||||| ||||||||||    
T  48930723 tttttcatgatttcgtcgtcttagtgcgacgttgtgttattcgtcgtcttgtgcggcgttgtttga 48930788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 20116588 - 20116664
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||  |||||| ||||||||||  |||| ||||||||||||||||    
T  20116588 tgttgttcgtcgtcttgtgcgtcgttgtttgatttaccgtcttcttgcggtgttcatttgattcatattgaaagatc 20116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 477
Target Start/End: Complemental strand, 21927921 - 21927821
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtca 476  Q
    ||||| ||||| |||||||||| |||  |||| ||| |||| ||   |||||||||||| |||||||  ||||||||||| ||||||||||||| |||||    
T  21927921 tttctttcaatttaaataagtggtttttacatgtattaagtttttcattttgtgttttttgtgatttcatcgtctgagtgtgacgttgtgttgttcgtca 21927822  T
Q  477 t 477  Q
    |    
T  21927821 t 21927821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 559
Target Start/End: Complemental strand, 29617781 - 29617709
Alignment:
Q  487 cgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    |||||||||| || |||||||||||  ||||||||||| ||| ||||||||||||| |||||| |||| ||||    
T  29617781 cgttgtttgatttcgcgtcttgttgtagtgtttgtttgattcgtattgaaagatcaactttagacaattacag 29617709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 35667303 - 35667227
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||| ||||| ||| |||||| ||||||||||  |||| ||||||||||||||||    
T  35667303 tgttgttcgtcgtcttgtgcggcgttttttgattttccgtcttcttgcggtgttcatttgattcatattgaaagatc 35667227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 368 - 541
Target Start/End: Original strand, 5792691 - 5792860
Alignment:
Q  368 tttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgt 467  Q
    ||||||| |||||| ||| |||||| || || ||| |||||||||  ||| || | | |||||||||| || |||||||||||| | |||   |||||||    
T  5792691 tttttctcttttctttcattctaaaaaaatggttttcacatatattgagttttttttgttgtgttttt-gttattttgtcgtctaattgcagtgttgtgt 5792789  T
Q  468 tgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||  |||||||||||||||   |||||| || |||||||||  | ||||| |||| |||| ||||||||||||    
T  5792790 tgttagtcatcttgtgcgac---gtttgatttcgcgtcttgtcacagtgttcgtttagttcctattgaaagatc 5792860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 320 - 484
Target Start/End: Complemental strand, 39171842 - 39171671
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcat--tctttttctgttttctatcaatctaaataagtgatttccacatatatc 413  Q
    ||||||||||||| ||||||||||| |||| ||||||||    ||| |||  | ||||||  |||||| || ||||||||||||| ||| || || ||||    
T  39171842 aggaggggtggttgtaggtcattttttgacctagaatcacccctctacatcttttttttcctttttctttcgatctaaataagtggttttcatatctatc 39171743  T
Q  414 aagtgttctcttttgtgt-ttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgc 484  Q
    |||| ||  ||||||||| |||| ||||||| ||| ||| |||||  |||| |||||| |||| ||||||||    
T  39171742 aagtttttccttttgtgtttttttgtgatttcgtcatctaagtgctgcgttttgttgttcgtcgtcttgtgc 39171671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 552
Target Start/End: Original strand, 2407170 - 2407240
Alignment:
Q  482 tgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtca 552  Q
    ||||| ||||||| | |||| || ||||||| |||||||||||||||||||| ||| |||| |||||||||    
T  2407170 tgcgatgttgtttaattttgtgttttgttgcagtgtttgtttggttcatattaaaatatcaactttagtca 2407240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 542
Target Start/End: Original strand, 6001998 - 6002104
Alignment:
Q  436 cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattga 535  Q
    |||||||| ||| |||||||| | || | |||||| |||| ||||||||| |||||||||| ||  ||| | || ||||||||  |||| ||||||||||    
T  6001998 cgtgatttcgtcatctgagtgtggcggtttgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtatcgtcgcggtgttcatttgattcatattga 6002097  T
Q  536 aagatca 542  Q
    |||||||    
T  6002098 aagatca 6002104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 541
Target Start/End: Complemental strand, 8001674 - 8001573
Alignment:
Q  437 gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaa 536  Q
    ||||||| ||||||| |||||| |||| |||||| |||| ||||||||| ||||   ||| || ||||||||| | ||||||||||  |||| |||||||    
T  8001674 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaa 8001578  T
Q  537 agatc 541  Q
    |||||    
T  8001577 agatc 8001573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 483
Target Start/End: Complemental strand, 32675565 - 32675472
Alignment:
Q  392 ataagtgatttccacatatatcaagtgttctcttttgtgttttt--cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtg 483  Q
    ||||||||||| || |||| ||| || || |||||||| |||||  | ||||| |||||| |||||||||||||||||||| |||||| |||||    
T  32675565 ataagtgattttcatatatttcatgttttttcttttgtatttttttcatgattctgtcgtttgagtgcgacgttgtgttgttcgtcattttgtg 32675472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 1448901 - 1448825
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| | ||||||| |||||||||| ||  |||||| ||||||||||  |||| ||||||||||||||||    
T  1448901 tgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatc 1448825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 23786581 - 23786657
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| |||| |||| |||||||||| ||  |||||| ||||||||||  |||| ||||||||||||||||    
T  23786581 tgttgttcgtcgtcttctgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatc 23786657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 46339060 - 46339136
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||| ||||||  | |||||||  |||| ||||||||||||||||    
T  46339060 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatc 46339136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 518
Target Start/End: Original strand, 4529982 - 4530117
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtca 476  Q
    ||||| ||||||||| |||||  ||| |||||||||||| | || ||||| |||||||| ||||||| ||||||| ||| ||  |||||||| | |||||    
T  4529982 tttctttcaatctaagtaagtatttttcacatatatcaaatttt-tcttt-gtgttttttgtgatttcgtcgtctaagtacggtgttgtgttattcgtca 4530079  T
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtt 518  Q
    | ||||| | |   |||||| |||||||||||||||||||||    
T  4530080 t-ttgtgtggc---gtttgattttgcgtcttgttgcggtgtt 4530117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 559
Target Start/End: Complemental strand, 24610238 - 24610179
Alignment:
Q  500 tgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    ||||||||||||||||||| |||| ||||||||| ||| ||||| || |||| |||||||    
T  24610238 tgcgtcttgttgcggtgttcgtttagttcatattaaaatatcagtttcagtcgatcacag 24610179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 480
Target Start/End: Complemental strand, 33530487 - 33530440
Alignment:
Q  433 tttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatctt 480  Q
    ||||||||||||||||||| ||| |||||||||||||| |||| ||||    
T  33530487 tttcgtgattttgtcgtcttagtacgacgttgtgttgttcgtcgtctt 33530440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 36479338 - 36479283
Alignment:
Q  45 ggataaaacacaatcttgccattgaacaagatttctagttaaa-acataaacataa 99  Q
    ||||||||||| ||||||||||||||||||||||| |  |||| ||||||||||||    
T  36479338 ggataaaacacgatcttgccattgaacaagatttccaaataaagacataaacataa 36479283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 434 - 540
Target Start/End: Original strand, 17611100 - 17611206
Alignment:
Q  434 ttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatatt 533  Q
    |||||||||| ||| || ||||| |  | |||||| | |||| |||||||||  ||||||||| |||  |||||||||| |||||  |||| ||||||||    
T  17611100 ttcgtgatttcgtcatccgagtgtggtggtgtgttattcgtcgtcttgtgcggagttgtttgattttctgtcttgttgcagtgttcatttgattcatatt 17611199  T
Q  534 gaaagat 540  Q
    |||||||    
T  17611200 gaaagat 17611206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 320 - 358
Target Start/End: Original strand, 19296719 - 19296757
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca 358  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  19296719 aggaggggtggttttaggtcattttttgacctagaatca 19296757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 436 - 542
Target Start/End: Complemental strand, 31235892 - 31235786
Alignment:
Q  436 cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattga 535  Q
    |||||||| ||| ||| |||| | || | |||||| |||| ||||||||  |||||||||| ||  ||| | |||||||||||  |||| ||||||||||    
T  31235892 cgtgatttcgtcatctaagtgtggcggtttgttgttcgtcgtcttgtgcagcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattga 31235793  T
Q  536 aagatca 542  Q
    |||||||    
T  31235792 aagatca 31235786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 413
Target Start/End: Complemental strand, 286720 - 286692
Alignment:
Q  385 aatctaaataagtgatttccacatatatc 413  Q
    |||||||||||||||||||||||||||||    
T  286720 aatctaaataagtgatttccacatatatc 286692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 417
Target Start/End: Original strand, 5775128 - 5775156
Alignment:
Q  389 taaataagtgatttccacatatatcaagt 417  Q
    |||||||||||||||||||||||||||||    
T  5775128 taaataagtgatttccacatatatcaagt 5775156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 14627950 - 14627874
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| | ||||||| |||||||||| ||  ||||||  | |||||||| |||| ||||||||||||||||    
T  14627950 tgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttagtacggtgtttatttgattcatattgaaagatc 14627874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 537
Target Start/End: Original strand, 32684674 - 32684746
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
    |||||| |||| ||||||||| |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||    
T  32684674 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaa 32684746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 42408368 - 42408444
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||  |||||||||| ||| ||||||  |||||| ||  |||| ||||||||||||||||    
T  42408368 tgttgttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtattcatttgattcatattgaaagatc 42408444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 417
Target Start/End: Original strand, 48930682 - 48930722
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagt 417  Q
    ||||| |||||||||||||||||||| |||||| |||||||    
T  48930682 tttctttcaatctaaataagtgattttcacatacatcaagt 48930722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 6e-51; HSPs: 95)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 293 - 558
Target Start/End: Original strand, 35175209 - 35175482
Alignment:
Q  293 taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttct-gacttagaatca-----tctgcattctttttctgttttctatcaa 386  Q
    |||||||||||||||||| ||| ||  | |||||||| |||||||||||||| | ||| ||||||||     |||| ||  |||||||  ||||  ||||    
T  35175209 taagttttctttctctttcactcgtctaagaggggtgcttttaggtcatttttttgacctagaatcaccccctctgaatattttttctcctttcattcaa 35175308  T
Q  387 tctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt--cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgc 484  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||  ||| |||| ||||||||||| |||| ||||||||| | || ||||||||    
T  35175309 tctaaacaagtgatttccacatatatcaagtgttttcttttgtgtttttttcgtaatttcgtcgtctgagtacgacattgtgttgttcatcgtcttgtgc 35175408  T
Q  485 gacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
      |||||||||| ||   |||||||||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  35175409 agcgttgtttgatttcatgtcttgttgcggtgttcgtttggtttatattgaaagatcagcttcagtcaatcaca 35175482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 383 - 556
Target Start/End: Complemental strand, 12947463 - 12947286
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt----cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatc 478  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    |||||||| ||||| |||||||| | ||||||||| |||| ||    
T  12947463 tcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgtttttttttcgtgatttcgtcgtttgagtgcggctttgtgttgttcgtcgtc 12947364  T
Q  479 ttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    ||||||| |||||||||| || || |||||||| |||||| |||||||||||||||||| |||| ||| |||||||||    
T  12947363 ttgtgcggcgttgtttgatttcgcatcttgttgtggtgttcgtttggttcatattgaaatatcaacttcagtcaatca 12947286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 251 - 458
Target Start/End: Complemental strand, 50194603 - 50194390
Alignment:
Q  251 agccgactctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgac 349  Q
    ||||||| ||||||||||||||||||||| |||||||||| | ||||||||| |||||||| ||| ||  || ||| |||||||||| ||||||| ||||    
T  50194603 agccgaccctagttttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtcgagaaggagtggttttagatcattttttgac 50194504  T
Q  350 ttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgt-ttttcgtgatttt 444  Q
     || |||||    ||||||| |||||||  || ||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||     
T  50194503 ctaaaatcacctctctgcatcctttttcccttctctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttc 50194404  T
Q  445 gtcgtctgagtgcg 458  Q
    ||||||||||||||    
T  50194403 gtcgtctgagtgcg 50194390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 293 - 542
Target Start/End: Original strand, 29921864 - 29922119
Alignment:
Q  293 taagttttctttctcttttacttgttaaggaggggtggtttt-aggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaat 387  Q
    |||||||||||||||||| | | ||  ||||||||||||||| |||||||||| |||  || |||||    ||| |||  ||||||   ||||| |||||    
T  29921864 taagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcacttctctccatcttttttcccctttctttcaat 29921963  T
Q  388 ctaaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcga 486  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||| | |||||||||||    | ||||||| ||    
T  29921964 ctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtga 29922063  T
Q  487 cgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    ||| |||||| || ||||||||||||||||| | ||| ||||||||||||||||||    
T  29922064 cgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatca 29922119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 293 - 542
Target Start/End: Original strand, 29971017 - 29971272
Alignment:
Q  293 taagttttctttctcttttacttgttaaggaggggtggtttt-aggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaat 387  Q
    |||||||||||||||||| | | ||  ||||||||||||||| |||||||||| |||  || |||||    ||| |||  ||||||   ||||| |||||    
T  29971017 taagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcacttctctccatcttttttcccctttctttcaat 29971116  T
Q  388 ctaaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcga 486  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||| | |||||||||||    | ||||||| ||    
T  29971117 ctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtga 29971216  T
Q  487 cgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    ||| |||||| || ||||||||||||||||| | ||| ||||||||||||||||||    
T  29971217 cgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatca 29971272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 386 - 559
Target Start/End: Original strand, 29239247 - 29239422
Alignment:
Q  386 atctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt--tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtg 483  Q
    |||||||||| |||||| |||||||||   ||||| |||||||||||||  |||||||||  ||||||||||||| ||||||||||| |||| |||||||    
T  29239247 atctaaataaatgattttcacatatattcggtgttttcttttgtgtttttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtg 29239346  T
Q  484 cgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    || || ||||||| ||  |||||||||| |||||| ||||||||| ||||| ||||||||||| ||||||||||||    
T  29239347 cggcgctgtttgatttcacgtcttgttgtggtgttcgtttggttcgtattggaagatcagcttcagtcaatcacag 29239422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 36461620 - 36461458
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||||||| ||||| |||||||| || |||||||||||||| ||||||| ||||||| |||||| ||||||||||| ||||    
T  36461620 ttttctttcaatctaaataagtgattttcacatctatcaagttttttcttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtc 36461521  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||||| |   |||||| || ||||||||| ||||||||||||  |||| ||||||||||||    
T  36461520 gtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtttgttctgttcctattgaaagatc 36461458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 297 - 558
Target Start/End: Original strand, 4821623 - 4821885
Alignment:
Q  297 ttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctg--ttttctatcaatcta 390  Q
    |||||||||||||| | | ||  || |||||||||||||||||||||| |||| || |||||    ||||||| | |||||    |||| | ||||||||    
T  4821623 ttttctttctctttcattcgtcgagaaggggtggttttaggtcattttttgacctataatcactcctctgcatccattttcctctttttttttcaatcta 4821722  T
Q  391 aataagtgatttccacatatatcaagtgttctcttttgtgtttt-tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgt 489  Q
    |||| || |||||||||||     |||||| ||||||||||||| || ||||||  |||||| ||||||  ||||| |||| |||| ||||||  ||| |    
T  4821723 aataggttatttccacata-----agtgttttcttttgtgttttctcatgatttcatcgtctaagtgcggtgttgtattgttcgtcgtcttgtt-gacat 4821816  T
Q  490 tgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  4821817 tgtttgattttgcgtcttgttgcggtgttcgtttggttcatattgaaagatcagcttgagtcaatcaca 4821885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 376 - 542
Target Start/End: Original strand, 53508120 - 53508288
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt-tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    |||||| ||||| |||||||||||||| |||||||||||||| || |||| |||||||| ||||||||| ||||||||| |||| ||||||||||| |||    
T  53508120 ttttctttcaatataaataagtgattttcacatatatcaagttttttcttctgtgttttttcgtgatttcgtcgtctgaatgcggcgttgtgttgttcgt 53508219  T
Q  475 catcttgtgcgacgttgtttgaatt-tgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    | |||||| ||| ||||||||| ||   ||| ||||||| ||||| ||||||||| |||||||||||||    
T  53508220 cgtcttgtacgatgttgtttgatttccccgttttgttgcagtgttcgtttggttcctattgaaagatca 53508288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 250 - 541
Target Start/End: Original strand, 10232838 - 10233131
Alignment:
Q  250 tagccgactctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctga 348  Q
    |||||||| |||||||| ||||| |||||| |||||||||| | |||  |||||||||| ||   |  | |||||||||||||||||||||||||| |||    
T  10232838 tagccgaccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggtggttttaggtcattttttga 10232937  T
Q  349 cttagaatca----tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattt 443  Q
    | ||||||||    ||| |||  ||||||   |||||| |||||||||||||||| ||| ||| | |||||||| ||  ||||||||||||| |||||||    
T  10232938 cctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgttttt-gtgattt 10233036  T
Q  444 tgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||| |||||| ||||||||||| |||| ||||||||| |   |||||| || |||| |||| ||||||||||||  |||| | ||||||||||    
T  10233037 cgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatc 10233131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 259 - 540
Target Start/End: Original strand, 47895928 - 47896212
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||||||| |||||||||||| |||||||||| | |||  |||||||||| ||   |  |  ||||||||||||| ||| ||||||| |||| |||||||    
T  47895928 ctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttatagatcattttttgacctagaatc 47896027  T
Q  358 a----tctgcattctttttctgtttt-ctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctg 452  Q
    |    ||| |||  ||||||| |||| || |||||||||||||||| ||| |||||||||||||| || |||||||||||||| ||||||| ||||||      
T  47896028 acccctctacatcttttttctctttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttttgtgatttcgtcgtcaa 47896127  T
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    |||| | ||||||||||| |||  ||||||||| |   |||||| ||  |||||||| ||||| ||||||| |||| |||||||||||    
T  47896128 agtgtggcgttgtgttgttcgttgtcttgtgcggc---gtttgatttcacgtcttgtcgcggtatttgtttagttcctattgaaagat 47896212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 263 - 558
Target Start/End: Complemental strand, 21290127 - 21289824
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca--- 358  Q
    ||||||||||||||||| ||   ||||| | ||||||||||| |||||| |||  |  ||||| |||| |||||||||| ||| |||| ||||||||       
T  21290127 ttttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatggaggagaggtgattttaggtcaatttttgacctagaatcaccc 21290028  T
Q  359 -tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttc-gtgattttgtcgtctgagtg 456  Q
     |||||||  ||||||   || || |||||| |||||||||||||  ||||| ||||||| || ||||| ||||||||  ||||||| ||||||| ||||    
T  21290027 ctctgcatcttttttcccctt-ctttcaatccaaataagtgattttaacatacatcaagtttt-tctttcgtgtttttttgtgatttcgtcgtcttagtg 21289930  T
Q  457 cgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtca 552  Q
    |||||||||| ||| |||  ||||||||| |||||||||| ||||| |||| |    ||||||||| ||||||||| ||||||||||||||||| || ||    
T  21289929 cgacgttgtggtgttcgttgtcttgtgcggcgttgtttgattttgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagaca 21289830  T
Q  553 atcaca 558  Q
    ||||||    
T  21289829 atcaca 21289824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 4396519 - 4396346
Alignment:
Q  378 ttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcat 477  Q
    |||| ||||| |||||||||||||||||||||     |||||| ||||||||| |||| | ||||| ||| || || ||||  ||||||||||  ||| |    
T  4396519 ttctttcaatttaaataagtgatttccacata-----agtgttttcttttgtgctttttgagatttcgtcatccgaatgcggtgttgtgttgtttgtcgt 4396425  T
Q  478 cttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    |||||| | |||||||||| |||||| |||||||||||||| ||||| ||||||||||||||| ||||| |||||||||    
T  4396424 cttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtcaatca 4396346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 386 - 558
Target Start/End: Original strand, 14859396 - 14859568
Alignment:
Q  386 atctaaataagtgatt-tc-cacatatatcaagtgttctcttttgtgt-ttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgt 482  Q
    |||||||||||||||| || |||||||||||||| || |||||||||  |||| ||||||| | ||||||||||||  |||||||||| |||||||||||    
T  14859396 atctaaataagtgattatcacacatatatcaagttttttcttttgtgactttttgtgatttcgccgtctgagtgcggtgttgtgttgttcgtcatcttgt 14859495  T
Q  483 gcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    | |||    ||| | ||||| |||||||||||||||  |||||||||||||||||||||||||| | |||||||||    
T  14859496 gtgac---atttaattttgcatcttgttgcggtgttcatttggttcatattgaaagatcagcttcaatcaatcaca 14859568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 320 - 541
Target Start/End: Original strand, 40487164 - 40487387
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaa 415  Q
    |||||||||| |||||||||||||| |||| ||||||||    ||| |||  |||| |  |||||| |||||||||||||||| ||| ||| | | ||||    
T  40487164 aggaggggtgattttaggtcattttttgacctagaatcactcttctacatctttttccccttttctttcaatctaaataagtggttttcacttctttcaa 40487263  T
Q  416 gtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggt 515  Q
    || ||   |||||| ||||| ||||||| ||||||| |||||| ||||||||||| |||| ||||||||| |||  ||||| || ||||||||| |||||    
T  40487264 gtttttctttttgtattttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgt--tttgatttcgcgtcttgtcgcggt 40487361  T
Q  516 gtttgtttggttcatattgaaagatc 541  Q
    |||||||  |||| ||||||||||||    
T  40487362 gtttgttcagttcctattgaaagatc 40487387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 376 - 522
Target Start/End: Complemental strand, 43488779 - 43488636
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| || || ||||||||||| ||||||| ||||||| |||| | ||||||||||| ||||    
T  43488779 ttttctttcaatctaaataagtggttttcacatctatcaagttttttcatttgtgttttttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtc 43488680  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtt 522  Q
     ||||||||| |   |||||| || ||||||||||||||||||||||    
T  43488679 gtcttgtgcggc---gtttgatttcgcgtcttgttgcggtgtttgtt 43488636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 386 - 559
Target Start/End: Complemental strand, 53808045 - 53807867
Alignment:
Q  386 atctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttc------gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatct 479  Q
    ||||||||||||||||| |||| |||||| | ||| ||||||||||||||       ||||||| ||||||| |||||||| ||||||||| |||| |||    
T  53808045 atctaaataagtgattttcacaaatatcaggcgttttcttttgtgttttttttttttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtct 53807946  T
Q  480 tgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    | |||| | |||||||| || || ||||||||| ||||| ||| ||||||||||||||||||| ||| ||||||||||||    
T  53807945 tctgcggcattgtttgatttggcatcttgttgctgtgttcgtt-ggttcatattgaaagatcaacttcagtcaatcacag 53807867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 326 - 541
Target Start/End: Complemental strand, 9797774 - 9797561
Alignment:
Q  326 ggtggttttaggtcattttctgacttagaatca----tctgcat--tctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgt 419  Q
    ||||||||||||||||||| |||| ||||||||    ||| |||  | ||||||| |||||| |||||||||||||||| ||| ||||| |||||||| |    
T  9797774 ggtggttttaggtcattttttgacctagaatcacccctctacatcttttttttctcttttctttcaatctaaataagtggttttcacatctatcaagt-t 9797676  T
Q  420 tct-cttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtt 518  Q
    ||| ||||||||||||| ||||||| ||||||| ||||||     | ||||| |||| ||||||||| |   |||||| |||||||||||| ||||||||    
T  9797675 tctacttttgtgttttttgtgatttcgtcgtctaagtgcg-----gcgttgttcgtcgtcttgtgcggc---gtttgattttgcgtcttgtcgcggtgtt 9797584  T
Q  519 tgtttggttcatattgaaagatc 541  Q
    ||||  |||| ||||||||||||    
T  9797583 tgttcagttcctattgaaagatc 9797561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 286 - 558
Target Start/End: Original strand, 16235224 - 16235504
Alignment:
Q  286 cttcttttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttct 381  Q
    |||||||||||||||||| |||||| |||  || |||| | ||| |||||||||| ||| |||| ||||||||    |||||||  ||||||  |||| |    
T  16235224 cttcttttaagttttcttcctctttcactcattgaggatgagtgattttaggtcaatttttgacctagaatcactcatctgcatcttttttccttttttt 16235323  T
Q  382 atcaatctaaataagtgatttc-cacatatatcaagtgttctcttttgtgtttt-tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatct 479  Q
     ||||||||||||||||||||  |||||| ||||||| || ||||| ||||||| |||||||||  |||||| |||||||||||||||||| || | |||    
T  16235324 -tcaatctaaataagtgatttttcacatacatcaagtttt-tctttcgtgttttttcgtgatttcatcgtcttagtgcgacgttgtgttgttcgccgtct 16235421  T
Q  480 tgtgcgacgttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||||| |||||||||| || || | || |    || |||| | ||||||||| ||||||||||| || ||||| ||||||||    
T  16235422 tgtgcggcgttgtttgatttcgcattttttgttgtgtggtgctcgtttggttcgtattgaaagattagttttagacaatcaca 16235504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 250 - 541
Target Start/End: Original strand, 9998234 - 9998528
Alignment:
Q  250 tagccgactctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttct-g 347  Q
    |||||||| |||||||| ||||| |||||| |||||||||| | |||  |||||||||| ||   |  |  ||||||||||||||||||||||||| | |    
T  9998234 tagccgaccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttg 9998333  T
Q  348 acttagaatca----tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgatt 442  Q
    || ||||||||    ||| |||  ||||||   |||||| |||||||||||||||| ||| ||| | |||||||| ||   |||||||||||| ||||||    
T  9998334 acctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttcattttgtgttttt-gtgatt 9998432  T
Q  443 ttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    | ||||||| |||||| ||||||||||| |||| ||||||||| |   |||||| || |||| |||| ||||||||||||| |||| | ||||||||||    
T  9998433 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgtttagttcctcttgaaagatc 9998528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 250 - 541
Target Start/End: Original strand, 10108006 - 10108297
Alignment:
Q  250 tagccgactctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctga 348  Q
    |||||||| |||||||| ||||| |||||| |||||||||| | |||  |||||||||| |||  |  |  |||||||||||||||||||||||||  ||    
T  10108006 tagccgaccctagttttctagtgggagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtggttttaggtcatttt--ga 10108103  T
Q  349 cttagaatca----tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattt 443  Q
    | ||||||||    ||| |||  ||||||   |||||| |||||||||||||||| ||| ||| | |||||||| ||  ||||||||||||| |||||||    
T  10108104 cctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgttttt-gtgattt 10108202  T
Q  444 tgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||| |||||| ||||||||||| |||| ||||||||| |   |||||| || |||| |||| |||||||||| |  |||| | ||||||||||    
T  10108203 cgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgctcagttcctcttgaaagatc 10108297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 269 - 558
Target Start/End: Original strand, 7546397 - 7546693
Alignment:
Q  269 agtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca----tctgc 363  Q
    |||||||||||||| | ||||| | |||||||||||||||| | |||  |  |||||||||| |||||||||| ||| |||  ||||||||    |||||    
T  7546397 agtgagagaaattcaatcttctctctaagttttctttctctctcactcatcgaggaggggtgattttaggtcaatttttgatctagaatcacccctctgc 7546496  T
Q  364 at--tctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacg 461  Q
    ||  | ||||||    |||| |||||||||||||||||||| |||||| |||||      |||| ||| ||||||||||||| ||||||| |||||||||    
T  7546497 atcttttttttcccccttctttcaatctaaataagtgattttcacatacatcaaag----tcttgtgt-tttttcgtgatttcgtcgtcttagtgcgacg 7546591  T
Q  462 ttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgc-gtc--ttgt--tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    ||||||||| |||| ||||||||| |||||||||| || ||  ||  ||||  ||||||||| ||||||||| |||||||||||||| || || ||||||    
T  7546592 ttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcaatcctttgttgtgcggtgttcgtttggttcgtattgaaagatcagtttcagacaatca 7546691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 376 - 496
Target Start/End: Original strand, 42460646 - 42460762
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| ||||||||||||||||||||||||||| ||||||| || ||||| |||||||||||||||| ||||||| ||||   ||||||||||| | ||    
T  42460646 ttttctttcaatctaaataagtgatttccacatacatcaagt-ttttctttcgtgtttttcgtgatttcgtcgtcttagtg---cgttgtgttgttcatc 42460741  T
Q  476 atcttgtgcgacgttgtttga 496  Q
     ||||||||| ||||||||||    
T  42460742 gtcttgtgcggcgttgtttga 42460762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 259 - 475
Target Start/End: Complemental strand, 7449213 - 7448992
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca 358  Q
    |||||||| || ||||||||| |||||||||| | ||  ||| |||||||||   |  |||||||||| ||||||||||||||||| |||| |||||||     
T  7449213 ctagttttctaatgagagaaactccaacttctctcaaactttttttctctttcgttcattaaggagggctggttttaggtcattttttgacatagaatcg 7449114  T
Q  359 tc----tgcattctttttc-tgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctga 453  Q
    ||    | |||  |||||| | |||||| |||||||||||||||| ||| | ||| |||||||| ||| |||||| |||||| ||||||||||||||| |    
T  7449113 tccctctacatcttttttcctcttttctttcaatctaaataagtggttttcgcatctatcaagttttcccttttgagttttttgtgattttgtcgtctaa 7449014  T
Q  454 gtgcgacgttgtgttgtccgtc 475  Q
    ||||  | ||||||||| ||||    
T  7449013 gtgctgcattgtgttgttcgtc 7448992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 259 - 475
Target Start/End: Complemental strand, 7457355 - 7457134
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca 358  Q
    |||||||| || ||||||||| |||||||||| | ||  ||| |||||||||   |  |||||||||| ||||||||||||||||| |||| |||||||     
T  7457355 ctagttttctaatgagagaaactccaacttctctcaaactttttttctctttcgttcattaaggagggctggttttaggtcattttttgacatagaatcg 7457256  T
Q  359 tc----tgcattctttttc-tgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctga 453  Q
    ||    | |||  |||||| | |||||| |||||||||||||||| ||| | ||| |||||||| ||| |||||| |||||| ||||||||||||||| |    
T  7457255 tccctctacatcttttttcctcttttctttcaatctaaataagtggttttcgcatctatcaagttttcccttttgagttttttgtgattttgtcgtctaa 7457156  T
Q  454 gtgcgacgttgtgttgtccgtc 475  Q
    ||||  | ||||||||| ||||    
T  7457155 gtgctgcattgtgttgttcgtc 7457134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 433 - 555
Target Start/End: Original strand, 51923676 - 51923802
Alignment:
Q  433 tttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtc--ttgt--tgcggtgtttgtttggttc 528  Q
    ||||||||||| ||||||| |||| ||||||||||||| |||||||||||||| |||| ||||| ||||| ||  ||||  ||||||||| |||||||||    
T  51923676 tttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcatcttgtgcggcgttatttgattttgcatcatttgttgtgcggtgttcgtttggttc 51923775  T
Q  529 atattgaaagatcagctttagtcaatc 555  Q
     ||||||||||||||||| || |||||    
T  51923776 gtattgaaagatcagcttcagacaatc 51923802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 320 - 541
Target Start/End: Complemental strand, 6954946 - 6954723
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatca 414  Q
    |||||||||| |||||||||||||| |||| ||||||||    ||| |||  ||||||   |||||| ||||||||||||||||  || ||||| |||||    
T  6954946 aggaggggtgattttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtgggtttcacatctatca 6954847  T
Q  415 agtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcgg 514  Q
    ||| ||   |||||||||||| ||||||| ||||||| |||||| |||||| |||| |||| ||||||||| |   |||||| || |||| ||||  |||    
T  6954846 agtttttcattttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtattgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcacgg 6954750  T
Q  515 tgtttgtttggttcatattgaaagatc 541  Q
    ||||||||  |||| ||||||||||||    
T  6954749 tgtttgttcagttcctattgaaagatc 6954723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 376 - 541
Target Start/End: Original strand, 10229376 - 10229537
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||| | |||||||| ||  ||||||||||||| ||||||| ||| ||| |||||| ||||||||||| ||||    
T  10229376 ttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgttttt-gtgatttcgtcttctaagtgcggcgttgtgttgttcgtc 10229474  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||||||| |   |||||| || |||| |||| ||||||||||||  |||| | ||||||||||    
T  10229475 atcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatc 10229537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 38860308 - 38860147
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||  ||||||||| ||| ||||| |||||||| || || ||||||||||| ||||||| ||||||| ||||||||||| |||||| ||||    
T  38860308 ttttctttcaattcaaataagtggttttcacatctatcaagttttttcctttgtgttttt-gtgatttcgtcgtctaagtgcgacgttttgttgttcgtc 38860210  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||||| |   | |||| || ||||||||| ||||||||||||| |||| ||||| ||||||    
T  38860209 gtcttgtgcggc---gattgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatc 38860147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 48650923 - 48650761
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||  ||||||| ||| ||||| |||||||| ||  ||||||||||||| ||||||||||||||| |||||| | ||||||||| |||     
T  48650923 ttttctttcaatctgtataagtggttttcacatctatcaagtttttccttttgtgttttttgtgattttgtcgtctaagtgcggcattgtgttgttcgtt 48650824  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||||| |    ||||| || ||||||||| ||||||||||||  |||| ||||||||||||    
T  48650823 gtcttgtgcggc---atttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatc 48650761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 389 - 547
Target Start/End: Complemental strand, 27706409 - 27706247
Alignment:
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgac 487  Q
    |||||||||||||| |||||| ||||  | || ||||| |||||||| |||||||| ||||||| |||| ||||||||||||| |||| ||||||||| |    
T  27706409 taaataagtgattttcacatacatcagatttt-tctttcgtgttttttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcgtcttgtgcggc 27706311  T
Q  488 gttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagcttt 547  Q
    ||||||| | || || |||| |    ||||||||| ||||||||| ||||||||||||||||||    
T  27706310 gttgtttaatttcgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttt 27706247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 387 - 558
Target Start/End: Original strand, 44804934 - 44805108
Alignment:
Q  387 tctaaataagtgatttccacatatatcaagtgttctcttttgtg----tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgt 482  Q
    |||||||||||||||||||||||||||||||||| |||| ||||    |||||||||||||||||||||  ||| | ||||||| |||      | ||||    
T  44804934 tctaaataagtgatttccacatatatcaagtgttttcttctgtgtttttttttcgtgattttgtcgtctaggtgtggcgttgtg-tgtttactgttttgt 44805032  T
Q  483 gcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    ||| |||||||| | ||  ||||||||||||||||| ||||||| |||||||||| |||| | | |||||||||||    
T  44805033 gcggcgttgtttaatttcacgtcttgttgcggtgttcgtttggtgcatattgaaatatcatcctcagtcaatcaca 44805108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 259 - 522
Target Start/End: Complemental strand, 45568756 - 45568491
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaat- 356  Q
    |||||||| |||||||||||| |||||||||| | |||  |||||||||| ||   |  |  ||||||||||||||||||||||||| |||  ||||||     
T  45568756 ctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgatctagaata 45568657  T
Q  357 ---catctgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctg 452  Q
       ||||| |||  ||||||   |||||| |||||||||||||||  ||| ||||| |||||||| || |||||| ||||||| ||||||| |||||||     
T  45568656 atccatctacatcttttttccccttttctttcaatctaaataagttgttttcacatctatcaagttttttcttttctgttttt-gtgatttcgtcgtcta 45568558  T
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtt 522  Q
    |||||| ||||||||||| |||| ||||||| | |   |||||| || |||||||||  |||||||||||    
T  45568557 agtgcggcgttgtgttgttcgtcgtcttgtgtggc---gtttgatttcgcgtcttgtcacggtgtttgtt 45568491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 390 - 558
Target Start/End: Original strand, 8914618 - 8914790
Alignment:
Q  390 aaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacg 488  Q
    ||||||| ||||| |||||| ||||||| || ||||| ||| ||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||||| ||    
T  8914618 aaataagggattttcacatacatcaagtttt-tctttcgtgctttttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcg 8914716  T
Q  489 ttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
     ||||||| ||||  |||| |    ||| ||||| ||||||||| ||||||||||| ||||| || ||||||||    
T  8914717 ctgtttgattttgtatcttttattgtgctgtgttcgtttggttcgtattgaaagattagcttcagacaatcaca 8914790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 259 - 490
Target Start/End: Original strand, 40556488 - 40556725
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||||||| ||||| |||||| |||||||||||| |||  |||||||||| ||   |  |  ||||||||||||||||||||||||| |||| |||||||    
T  40556488 ctagttttctagtgggagaaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggtggttttaggtcattttttgacctagaatc 40556587  T
Q  358 a----tctgcat-tctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctg 452  Q
    |    ||  ||| | ||||||  |||||| |  || |||||||||| ||| || || |||||||| ||| ||||||||||||  ||||||| |||||||     
T  40556588 acccctccacatctttttttcccttttcttttgatataaataagtggttttcatatctatcaagttttcccttttgtgttttatgtgatttcgtcgtcta 40556687  T
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgtt 490  Q
    |||||| ||||||||||| |||| ||||||||| ||||    
T  40556688 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 40556725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 52923306 - 52923144
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| ||  ||||||||| ||| | ||||||||||||| |||| | || |||||||| ||||    
T  52923306 ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtcttttgggattttgtcgtctaagtgtggcgctgtgttgttcgtc 52923207  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||||| |   |||||| || |||| |||| ||||||||||||  |||| | ||||||||||    
T  52923206 gtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatc 52923144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 320 - 541
Target Start/End: Original strand, 54148827 - 54149053
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttc-tgttttctatcaatctaaataagtgatttccacatatatca 414  Q
    ||||||||||||||||||||||||| |||| || |||||    ||| |||  |||||| | |||||| |||||||||||||||| ||| ||||| |||||    
T  54148827 aggaggggtggttttaggtcattttttgacctacaatcacccctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatctatca 54148926  T
Q  415 agtgttctcttttg--tgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatct-tgtgcgacgttgtttgaatttgcgtcttgttg 511  Q
    ||| || |||||||  | ||||| ||||||| ||||||| |||||| | ||||||||| |||| |||  ||||| |    ||||| || |||| |||| |    
T  54148927 agttttttcttttgtattttttttgtgatttcgtcgtctaagtgcggcattgtgttgttcgtcgtctaagtgcggc---atttgatttcgcgtattgtcg 54149023  T
Q  512 cggtgtttgtttggttcatattgaaagatc 541  Q
    |||||||||||| |||| ||||||||||||    
T  54149024 cggtgtttgtttagttcctattgaaagatc 54149053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 377 - 541
Target Start/End: Complemental strand, 31271995 - 31271834
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtca 476  Q
    ||||||||||||||||||| || ||| ||||| |||||||| || |||||||||||||| |||||||  |||||| ||||||   ||||||||| ||||     
T  31271995 tttctatcaatctaaataaatggttttcacatttatcaagttttttcttttgtgttttttgtgatttcttcgtctaagtgcggttttgtgttgttcgtcg 31271896  T
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||||| |    ||||| || ||||||||| ||||  || |||| |||||||| ||||||||    
T  31271895 tcttgtgcggc---atttgatttcgcgtcttgtcgcggcattcgtttagttcatatggaaagatc 31271834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 385 - 536
Target Start/End: Original strand, 22290846 - 22290998
Alignment:
Q  385 aatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtg 483  Q
    |||||||||||||||||| ||||||||| || | ||  ||||||||||||| | |||||| || ||| |||||   ||||||||||| |  | |||||||    
T  22290846 aatctaaataagtgattttcacatatattaaatttttccttttgtgttttttcatgatttcgtagtccgagtgtatcgttgtgttgttcaccgtcttgtg 22290945  T
Q  484 cgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaa 536  Q
      | ||||||||| ||||| ||||||||||||||| ||||||||| |||||||    
T  22290946 tcatgttgtttgattttgcatcttgttgcggtgttcgtttggttcttattgaa 22290998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 35865123 - 35864959
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt---tcgtgattttgtcgtctgagtgcgacgttgtgttgtcc 472  Q
    |||||| |||||||||||||||  ||| |||||||||||||| || |||||||||||||   | ||||||| ||||||| | |||| |||||||||||      
T  35865123 ttttctttcaatctaaataagtagttttcacatatatcaagtttt-tcttttgtgttttaatttgtgatttcgtcgtctaattgcggcgttgtgttgtta 35865025  T
Q  473 gtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||| ||||||| | ||||   ||| |||||||||| | |||||||| |||| |||| ||||||||||||    
T  35865024 gtcgtcttgtgtggcgtt---tgattttgcgtcttttcgcggtgttcgtttagttcctattgaaagatc 35864959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 20987988 - 20987826
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| ||||| |||||||||||||| || ||||||| ||| || |||||||||||||| ||||||| ||||||| | ||||  |||||||| |  |||    
T  20987988 ttttctttcaatttaaataagtgattttcaaatatatcgagttttttcttttgtgttttttgtgatttcgtcgtctaattgcggtgttgtgttcttagtc 20987889  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||| | |    ||||| || ||||||||| ||| ||||||||| |||| ||||||||||||    
T  20987888 gtcttgtgtggc---atttgatttcgcgtcttgtcgcgatgtttgtttagttcctattgaaagatc 20987826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 384 - 541
Target Start/End: Complemental strand, 21533990 - 21533836
Alignment:
Q  384 caatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtg 483  Q
    ||||||||||||||| ||| ||||| |||||||| || |||| | | ||||| ||||||| || ||||  ||||| ||||||||||| |||| ||||||     
T  21533990 caatctaaataagtggttttcacatctatcaagttttttcttgtattttttttgtgatttcgttgtctatgtgcggcgttgtgttgttcgtcgtcttgt- 21533892  T
Q  484 cgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
      |||  |||||  || ||||||||| ||||||||||||| |||| ||||||||||||    
T  21533891 --acggcgtttggtttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatc 21533836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 431 - 558
Target Start/End: Original strand, 32246398 - 32246525
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcat 530  Q
    |||||||||||||  ||||||||||||||  || ||||||  ||| | |||||||||||||||||| |  ||||||||||||| ||||   ||||||| |    
T  32246398 tttttcgtgatttcatcgtctgagtgcgaaattatgttgtttgtcgttttgtgcgacgttgtttgattccgcgtcttgttgcgctgttcacttggttcct 32246497  T
Q  531 attgaaagatcagctttagtcaatcaca 558  Q
    |||||||||||| ||| ||| |||||||    
T  32246498 attgaaagatcaacttcagttaatcaca 32246525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 320 - 490
Target Start/End: Complemental strand, 47042302 - 47042124
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcat-tctttttctgttttctatcaatctaaataagtgatttccacatatatca 414  Q
    ||||||||||||||||||||||||| | || || |||||    ||| ||| | ||||||  |||||| ||||| |||||||||||||| |||||||||||    
T  47042302 aggaggggtggttttaggtcattttttaacctataatcacccctctacatctttttttcccttttctttcaatttaaataagtgattttcacatatatca 47042203  T
Q  415 agtgttctctttt---gtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgtt 490  Q
     || || ||||||    | ||||| ||||||| ||||||| ||| |||||||||||||| |||| ||||||||| ||||    
T  47042202 tgttttttcttttttctttttttttgtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtt 47042124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 377 - 559
Target Start/End: Original strand, 51487001 - 51487189
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatc-aagtgttctcttttgtg-tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    ||||| ||||||||||||||||||||  | ||| ||| |||| || ||||  ||| ||||||||||||| ||| ||| |||| ||||||||||||| |||    
T  51487001 tttctttcaatctaaataagtgatttttatatacatcaaagttttttcttgcgtgttttttcgtgatttcgtcatcttagtgggacgttgtgttgttcgt 51487100  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    | ||||||||| |||||||||| || |  |||| |    || ||||||| |||||||||||||||||||||| |||  | |||||||||    
T  51487101 cgtcttgtgcggcgttgtttgatttcgtatcttttgttgtgtggtgtttttttggttcatattgaaagatcaacttcggacaatcacag 51487189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 376 - 490
Target Start/End: Original strand, 21431524 - 21431638
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| ||   |||||||||||| ||||||| | ||||| |||||| | ||||||||| ||||    
T  21431524 ttttctttcaatctaaataagtggttttcacatctatcaagtttttctttttgtgttttttgtgatttcgccgtctaagtgcggcattgtgttgttcgtc 21431623  T
Q  476 atcttgtgcgacgtt 490  Q
     ||||||||| ||||    
T  21431624 gtcttgtgcggcgtt 21431638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 423 - 554
Target Start/End: Original strand, 19339122 - 19339250
Alignment:
Q  423 cttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtt 522  Q
    ||||||||||||  ||||||||||||||| |||| ||||||||||||| ||||| |||||||| |   |||| | ||  |||||||| | || ||| |||    
T  19339122 cttttgtgttttatgtgattttgtcgtctaagtgtgacgttgtgttgttcgtcaacttgtgcggc---gtttaatttcacgtcttgtcgtggcgttcgtt 19339218  T
Q  523 tggttcatattgaaagatcagctttagtcaat 554  Q
    | |||| ||||||||||||| |||||||||||    
T  19339219 tagttcctattgaaagatcaactttagtcaat 19339250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 383 - 518
Target Start/End: Complemental strand, 20465152 - 20465020
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgt 482  Q
    ||||| ||||||||||||||  ||||||||||||| ||  ||||||||||||| |||||||  |||||| |||| |  |||||||||| |||| ||||||    
T  20465152 tcaatataaataagtgattttaacatatatcaagtttttccttttgtgttttttgtgatttcatcgtctaagtgaggtgttgtgttgttcgtcgtcttgt 20465053  T
Q  483 gcgacgttgtttgaatttgcgtcttgttgcggtgtt 518  Q
       |||  |||||| |||||||||||| ||||||||    
T  20465052 ---acggcgtttgattttgcgtcttgtcgcggtgtt 20465020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 325 - 435
Target Start/End: Original strand, 33579712 - 33579826
Alignment:
Q  325 gggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgtt 420  Q
    ||||||||||| |||||||| |||| ||||||||    ||| |||  ||||||  |||||| |||||||||||||||||||| |||||||||| ||| ||    
T  33579712 gggtggttttaagtcattttttgacctagaatcacccctctacatcttttttccattttctttcaatctaaataagtgattttcacatatatctagtttt 33579811  T
Q  421 ctcttttgtgttttt 435  Q
     ||||||||||||||    
T  33579812 ttcttttgtgttttt 33579826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 431 - 556
Target Start/End: Original strand, 41818163 - 41818287
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcat 530  Q
    |||||||||||||  |||| |||||||||| ||||||||| |||| |||||||||   |||||||| || ||||||||||| | |||| |||| |||| |    
T  41818163 tttttcgtgatttcatcgtatgagtgcgacattgtgttgttcgtcgtcttgtgcggtattgtttgatttcgcgtcttgttgtgatgttcgttt-gttcct 41818261  T
Q  531 attgaaagatcagctttagtcaatca 556  Q
    |||||||||||| ||| | |||||||    
T  41818262 attgaaagatcaacttcaatcaatca 41818287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 263 - 559
Target Start/End: Complemental strand, 629214 - 628932
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatcatc- 360  Q
    ||||||||||||||||| || ||||||| | ||||||||| ||| |||| |||  |  ||||||||||||||||||||||| | |||| || |||||||     
T  629214 ttttttagtgagagaaactctaacttctctctaagttttccttccctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcatcc 629115  T
Q  361 ---tgcattctttttctgtt-ttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtg 456  Q
       |||||  ||||| |    |||| || ||||||||||||||||| |||| |||||||| |||    ||| |||||   ||||||| ||||||| ||||    
T  629114 ttctgcatcttttttttccccttctttcgatctaaataagtgattttcacaaatatcaagcgtt----tttttgttt---gtgatttcgtcgtctaagtg 629022  T
Q  457 cgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    |||| |||||||||   |||||         ||||||||| || |  ||||||||||||||| ||| ||||||||||||||||||||||| |||||||||    
T  629021 cgaccttgtgttgt---tcatc---------gttgtttgatttggaatcttgttgcggtgttcgtt-ggttcatattgaaagatcagcttcagtcaatca 628935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 376 - 534
Target Start/End: Complemental strand, 12050836 - 12050682
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| | |||||| ||||||| ||| ||||| |||||||| || |||||||||||||| ||||||| ||||||| || ||| |||| |||||| ||||    
T  12050836 ttttctttaaatctagataagtggttttcacatctatcaagttttatcttttgtgttttt-gtgatttcgtcgtctaagcgcggcgttttgttgttcgtc 12050738  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattg 534  Q
     ||||||||| |   |||||| ||  | |||||| ||||||||||||| |||| |||||    
T  12050737 gtcttgtgcggc---gtttgatttctcctcttgtcgcggtgtttgtttagttcctattg 12050682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 376 - 490
Target Start/End: Original strand, 37040671 - 37040782
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||||||   ||||||||  ||||||||||||| ||||||||||||||| ||| | ||| |||||||  ||||    
T  37040671 ttttctttcaatctaaataagtggttttcacata---caagtgtttccttttgtgttttttgtgattttgtcgtctaagtacaacgctgtgttggtcgtc 37040767  T
Q  476 atcttgtgcgacgtt 490  Q
     ||||||||| ||||    
T  37040768 gtcttgtgcggcgtt 37040782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 450 - 556
Target Start/End: Complemental strand, 26716226 - 26716119
Alignment:
Q  450 ctgagtgcgacgttgtgttgtccgtcatctt-gtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagcttta 548  Q
    ||||||||||||||||||||| | | ||||| |||||| ||||||| | ||||  ||||||||||||||| ||||| ||  ||||||||||| ||||| |    
T  26716226 ctgagtgcgacgttgtgttgttcattatctttgtgcgatgttgtttaattttgtatcttgttgcggtgttcgtttgatttctattgaaagattagcttca 26716127  T
Q  549 gtcaatca 556  Q
    ||||||||    
T  26716126 gtcaatca 26716119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 368 - 552
Target Start/End: Complemental strand, 20609087 - 20608915
Alignment:
Q  368 tttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgt 467  Q
    ||||||| |||||| |||||||||||||||| |||  ||||||||||||| ||  ||||||||         |||| ||||||| | |||| ||||||||    
T  20609087 tttttctcttttctttcaatctaaataagtggttttaacatatatcaagtttttccttttgtg---------atttcgtcgtctaattgcggcgttgtgt 20608997  T
Q  468 tgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtca 552  Q
    |||  ||| ||||||||| |    ||||| |||||||||||| ||||||||||||| |||| |||||||| |||| | |||||||    
T  20608996 tgttagtcgtcttgtgcggc---atttgattttgcgtcttgtcgcggtgtttgtttagttcctattgaaatatcaacattagtca 20608915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 435 - 542
Target Start/End: Complemental strand, 25461134 - 25461025
Alignment:
Q  435 tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtct--tgttgcggtgtttgtttggttcatat 532  Q
    |||||| || ||||| |||||||| |||| |||||| |||| |||| ||||||||||||||| |||| ||||  |||||| ||||| ||||| |||| ||    
T  25461134 tcgtgacttcgtcgtttgagtgcggcgttatgttgttcgtcgtcttatgcgacgttgtttgattttgtgtcttgtgttgctgtgttcgtttgtttcacat 25461035  T
Q  533 tgaaagatca 542  Q
    ||||||||||    
T  25461034 tgaaagatca 25461025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 383 - 490
Target Start/End: Original strand, 9319963 - 9320070
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgt 482  Q
    |||||| ||||||||| ||| ||||| |||||||| ||  |||||||||||||  |||||| || |||| | |||| | ||||||||| |||| ||||||    
T  9319963 tcaatcaaaataagtggttttcacatctatcaagtttttccttttgtgttttttatgatttcgttgtctaaatgcggcattgtgttgttcgtcgtcttgt 9320062  T
Q  483 gcgacgtt 490  Q
    ||||||||    
T  9320063 gcgacgtt 9320070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 259 - 344
Target Start/End: Original strand, 14859274 - 14859360
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcatttt 344  Q
    |||||||||||| |||||||| | |||||||| | ||||||||| |||| ||| |||| || |||||||||| ||||||||||||||    
T  14859274 ctagttttttagcgagagaaacttcaacttctctctaagttttcattctttttcacttattgaggaggggtgattttaggtcatttt 14859360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 376 - 490
Target Start/End: Complemental strand, 23800098 - 23799985
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| |||  ||||||||||||| | | ||||| ||||||| ||||||| ||||||| | |||| ||||||||| |  |||    
T  23800098 ttttctttcaatctaaataagtggtttttacatatatcaagtttgcccttttttgttttt-gtgatttcgtcgtctaattgcggcgttgtgttcttagtc 23800000  T
Q  476 atcttgtgcgacgtt 490  Q
     ||||||||| ||||    
T  23799999 gtcttgtgcggcgtt 23799985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 25842634 - 25842724
Alignment:
Q  438 tgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttc 528  Q
    |||||||||||| |||||||||||||||||||| | ||||||| ||||   |||||||| ||  |||||||||| |||||| |||| ||||    
T  25842634 tgattttgtcgtttgagtgcgacgttgtgttgttcatcatcttctgcggtattgtttgatttctcgtcttgttgtggtgttcgtttagttc 25842724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 435 - 541
Target Start/End: Original strand, 31794044 - 31794150
Alignment:
Q  435 tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattg 534  Q
    ||||||||||||| ||||||||    | |||||||| |||| | ||||||| |||||||||| |||   |||||||||||||||  |||| |||||||||    
T  31794044 tcgtgattttgtcatctgagtgtagtggtgtgttgttcgtcgttttgtgcggcgttgtttgattttctatcttgttgcggtgttcatttgattcatattg 31794143  T
Q  535 aaagatc 541  Q
    |||||||    
T  31794144 aaagatc 31794150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 431 - 523
Target Start/End: Original strand, 38545753 - 38545842
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgttt 523  Q
    ||||| ||||||| ||||||| ||| |||||||||||||| |||| ||||||||| |   |||||| || ||||||||| |||||||||||||    
T  38545753 ttttttgtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtttgttt 38545842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 324 - 541
Target Start/End: Original strand, 32701341 - 32701552
Alignment:
Q  324 ggggtggttttaggtcattttctgacttagaatcatc----tgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtg 418  Q
    ||||||||||||||||||||| |||| ||||||||||    | |||  || ||||  |||||| ||||||||||||||||       ||| ||||||||     
T  32701341 ggggtggttttaggtcattttttgacctagaatcatccctctacatctttcttctccttttctttcaatctaaataagtgg------catctatcaagtt 32701434  T
Q  419 ttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtt 518  Q
    ||  ||||||||||||| ||| ||| ||||||| |||||| |||||| ||||  ||| ||||||||| |   |||||| || |||| |||||||| ||||    
T  32701435 tttccttttgtgttttttgtgctttcgtcgtctaagtgcggcgttgtattgt--gtcgtcttgtgcggc---gtttgatttcgcgttttgttgcgatgtt 32701529  T
Q  519 tgtttggttcatattgaaagatc 541  Q
    ||||  |||| ||||||||||||    
T  32701530 tgttcagttcctattgaaagatc 32701552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 559
Target Start/End: Original strand, 52496929 - 52497006
Alignment:
Q  482 tgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    ||||||||||||||| ||  ||| |||||| |||||| ||||| ||| ||||||||||||||||| | ||||||||||    
T  52496929 tgcgacgttgtttgatttcacgtattgttgaggtgttcgtttgattcttattgaaagatcagcttcaatcaatcacag 52497006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 367 - 541
Target Start/End: Complemental strand, 12149982 - 12149811
Alignment:
Q  367 ctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtg 466  Q
    |||||| | |||||| | || ||||||||||| |||  ||||||||| ||| ||  |||||||| |||| ||||||| ||| ||| |||||| ||||||     
T  12149982 ctttttttcttttcttttaagctaaataagtggtttttacatatatccagtttttgcttttgtgatttttgtgatttcgtcatctaagtgcggcgttgta 12149883  T
Q  467 ttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||| | || ||||||||  |   |||||| || ||||||||| ||| |||| |||| |||| ||||||||||||    
T  12149882 ttgttcatcgtcttgtgcagc---gtttgatttcgcgtcttgtcgcgatgttcgtttagttcctattgaaagatc 12149811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 554
Target Start/End: Original strand, 18010919 - 18011094
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaa-gtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    ||||| || ||||||| ||||| ||| |||||||||||| || ||  ||||||||||||| ||||||  ||  ||| |||| ||||||||||||| | ||    
T  18010919 tttctttcgatctaaaaaagtggttttcacatatatcaaagtttttccttttgtgttttttgtgattccgttatctaagtgtgacgttgtgttgttcatc 18011018  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
    |||||||||| |   |||||| ||  | ||||||  ||||||| |||| |||  ||||||||||||  |||||||||||    
T  18011019 atcttgtgcggc---gtttgatttcacatcttgtcacggtgttcgtttagtttctattgaaagatcgactttagtcaat 18011094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 448 - 540
Target Start/End: Complemental strand, 26739477 - 26739385
Alignment:
Q  448 gtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    |||||||||| ||| |||||||| | |  ||||||||| ||| |||||| ||||| |||||||| | ||| |||||||||| |||||||||||    
T  26739477 gtctgagtgcaacgctgtgttgttcattgtcttgtgcggcgtcgtttgattttgcatcttgttgtgatgtctgtttggttcctattgaaagat 26739385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 446 - 541
Target Start/End: Original strand, 27094436 - 27094532
Alignment:
Q  446 tcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaattt-gcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||||||| || ||||||||||  ||| ||||||||||| || |||  |||| |||||||||||||||||| | |||||||||| ||| |||||    
T  27094436 tcgtctgagtgtgatgttgtgttgtgtgtcgtcttgtgcgacattatttttatttcgcgtcttgttgcggtgttcgattggttcatactgacagatc 27094532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 540
Target Start/End: Complemental strand, 36910830 - 36910668
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| ||  ||| |||| ||||| ||||||| | | ||| |||||| |||| |||||| |||    
T  36910830 ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttctgtgtttttttgtgatttcg-cctctaagtgcggcgttttgttgttcgt 36910732  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgtt-gcggtgtttgtttggttcatattgaaagat 540  Q
    | ||||||||| |   |||||| || |||||||||| ||||||| ||||  |||| |||||||||||    
T  36910731 cgtcttgtgcggc---gtttgatttcgcgtcttgttcgcggtgtctgttcagttcctattgaaagat 36910668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 42719520 - 42719596
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||| ||||||  |||||||||  |||| ||||||||||||||||    
T  42719520 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 42719596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 554
Target Start/End: Original strand, 43016757 - 43016929
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtca 476  Q
    ||||| ||||| || |||||||||||| |||||||| |||| |   ||||||| | ||| ||||||| ||||||  |||||| ||||||||||| ||| |    
T  43016757 tttctttcaatttatataagtgatttc-acatatattaagtttatccttttgtctgttt-gtgatttcgtcgtccaagtgcggcgttgtgttgttcgtta 43016854  T
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
    ||||||| | ||||   ||| |||| ||||||| ||||||||||||| |||| |  |||||||||  | |||||||||    
T  43016855 tcttgtgtggcgtt---tgattttgtgtcttgtcgcggtgtttgtttagttccttgtgaaagatcgacgttagtcaat 43016929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 554
Target Start/End: Original strand, 53099723 - 53099864
Alignment:
Q  409 atatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttg 508  Q
    ||||||||| ||  ||||||||||||| ||||||| ||||||| | || |||||||||||||  ||||||||||||| ||||   ||| ||  |||||||    
T  53099723 atatcaagtttttacttttgtgttttt-gtgatttcgtcgtctaattgtgacgttgtgttgttagtcatcttgtgcggcgtt---tgatttcacgtcttg 53099818  T
Q  509 ttgcggtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
    | || || ||  ||| |||| ||||||||||||||| | |||||||    
T  53099819 tcgccgtattcatttagttcctattgaaagatcagcatgagtcaat 53099864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 470
Target Start/End: Original strand, 27856079 - 27856173
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaag-tgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgt 470  Q
    ||||| || ||| |||||| |||||| ||||||||||||  | | || || ||||||||| ||||||| |||||||||||||||| |||||||||    
T  27856079 tttctttccatcgaaataactgattttcacatatatcaaaatatccttttgtgtgttttttgtgatttcgtcgtctgagtgcgacattgtgttgt 27856173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 541
Target Start/End: Complemental strand, 44960128 - 44959979
Alignment:
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacg 488  Q
    |||||||||| ||| ||||| ||| |||| ||  ||||| ||||||| ||||||| ||||||| ||||||  ||||| || | |||| ||||||||| ||    
T  44960128 taaataagtggttttcacatctattaagtttttccttttatgttttttgtgatttcgtcgtctaagtgcggtgttgtattattcgtcgtcttgtgcggcg 44960029  T
Q  489 ttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||   ||| ||||||| |||| | ||||||||||  |||  ||||||||||||    
T  44960028 tt---tgattttgcgttttgtcgtggtgtttgttcagtttttattgaaagatc 44959979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 546
Target Start/End: Complemental strand, 51303915 - 51303665
Alignment:
Q  293 taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca---tctgcattctttttctgttttctatcaatct 389  Q
    ||||||||||| ||||||||||  |  ||||||| || ||||| |||| ||| |||| ||||||||   |||||||  ||||||   ||| | ||||||     
T  51303915 taagttttcttcctcttttactcatcgaggagggatgattttatgtcaatttttgacctagaatcaccctctgcatcttttttcccctttttttcaatcc 51303816  T
Q  390 aaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgt 489  Q
    ||||||||||||| |||||| ||||||| ||          | ||||||||||| ||||| | ||||||||||||||||||  ||| |||| || |  ||    
T  51303815 aaataagtgattttcacatacatcaagtttt----------tctttcgtgatttcgtcgttttagtgcgacgttgtgttgtttgtcgtcttatgaggtgt 51303726  T
Q  490 tgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctt 546  Q
    ||||||| || || |||| |    ||||||||| ||||||||  |||||||||||||||||    
T  51303725 tgtttgatttcgcatcttttgttgtgcggtgttcgtttggtttgtattgaaagatcagctt 51303665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 52116187 - 52116141
Alignment:
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtgttttt 435  Q
    |||||||||||||| |||||||||||||| || ||||||||||||||    
T  52116187 taaataagtgattttcacatatatcaagttttttcttttgtgttttt 52116141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 434 - 494
Target Start/End: Original strand, 4019691 - 4019752
Alignment:
Q  434 ttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatc-ttgtgcgacgttgttt 494  Q
    |||||||||| ||||||| |||||||||||||||||| |||| || ||||||| ||||||||    
T  4019691 ttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctttgtgcggcgttgttt 4019752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 559
Target Start/End: Complemental strand, 50194393 - 50194344
Alignment:
Q  510 tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    ||||||||| ||||| |||||||||||||| |||||| ||||||||||||    
T  50194393 tgcggtgttcgtttgtttcatattgaaagaccagcttcagtcaatcacag 50194344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 445 - 541
Target Start/End: Original strand, 3606741 - 3606837
Alignment:
Q  445 gtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||||||||||| | ||||||||| |||| ||||||| | |||||| |||  |  |||||||||| |||||| |||||||   ||||||||||||    
T  3606741 gtcgtctgagtgcggcattgtgttgttcgtcgtcttgtgtggcgttgtatgatatcccgtcttgttgtggtgttcgtttggtatctattgaaagatc 3606837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 537
Target Start/End: Original strand, 21488106 - 21488166
Alignment:
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
    ||||||||| |||||||||| ||  |||||| ||||||||||| |||| ||||||||||||    
T  21488106 tcttgtgcggcgttgtttgatttcccgtcttcttgcggtgtttatttgattcatattgaaa 21488166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 518
Target Start/End: Complemental strand, 24176209 - 24176141
Alignment:
Q  450 ctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtt 518  Q
    ||||||||| | |||| | || |||||||||||||||| |||||||| ||||  |||||||||||||||    
T  24176209 ctgagtgcggcattgtatagttcgtcatcttgtgcgacattgtttgattttgtatcttgttgcggtgtt 24176141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 35499269 - 35499193
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  35499269 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatc 35499193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 46934645 - 46934721
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| |||||||||  ||||||||| ||  |||||| ||||||||||  |||| ||||||||||||||||    
T  46934645 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatc 46934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 541
Target Start/End: Original strand, 33579863 - 33579941
Alignment:
Q  460 cgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||||||| |||| ||||||||  ||||   ||| |||||||||||| |||||||| ||||  ||||||||||||||||    
T  33579863 cgttgtgttgttcgtcgtcttgtgcatcgtt---tgattttgcgtcttgtcgcggtgttcgtttatttcatattgaaagatc 33579941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 38142349 - 38142400
Alignment:
Q  260 tagttttttagtgagagaaattccaacttc-ttttaagttttctttctcttt 310  Q
    |||||||||||||||||||| ||||  ||| |||||||||||||||||||||    
T  38142349 tagttttttagtgagagaaactccacattctttttaagttttctttctcttt 38142400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 433 - 495
Target Start/End: Complemental strand, 36540692 - 36540630
Alignment:
Q  433 tttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttg 495  Q
    ||||||||||| ||||||| ||||||||||||| |||  |||| ||||||| || ||||||||    
T  36540692 tttcgtgatttcgtcgtcttagtgcgacgttgttttgatcgtcgtcttgtgggatgttgtttg 36540630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 542
Target Start/End: Original strand, 22803025 - 22803102
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    |||||| |||| |||| |||| |||||||||| ||  ||| | |||||||||||  |||| |||||||||||||||||    
T  22803025 tgttgttcgtcgtcttatgcggcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatca 22803102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 537
Target Start/End: Complemental strand, 46322405 - 46322356
Alignment:
Q  488 gttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
    ||||||||  ||| |||||||||||||||||  |||||||||||||||||    
T  46322405 gttgtttgtttttccgtcttgttgcggtgttcatttggttcatattgaaa 46322356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 334 - 434
Target Start/End: Original strand, 3785706 - 3785810
Alignment:
Q  334 taggtcattttctgacttagaat----catctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatc-aagtgttctcttttg 428  Q
    ||||||||||| |||||||||||    |||||||||  |||||| | ||||| |||||  |||||||||||||  ||||||||| ||| ||| |||||||    
T  3785706 taggtcattttttgacttagaatcacacatctgcatcttttttccg-tttctttcaattcaaataagtgatttttacatatatctaagagttttcttttg 3785804  T
Q  429 tgtttt 434  Q
    ||||||    
T  3785805 tgtttt 3785810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 541
Target Start/End: Original strand, 12116113 - 12116177
Alignment:
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||||| |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  12116113 tcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 12116177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 20988076 - 20988036
Alignment:
Q  250 tagccgactctagttttttagtgagagaaattccaacttct 290  Q
    |||||| | ||||||||||||||||||||| ||||||||||    
T  20988076 tagccggccctagttttttagtgagagaaactccaacttct 20988036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 22290719 - 22290767
Alignment:
Q  263 ttttttagtgagagaaattccaacttctttt-aagttttctttctcttt 310  Q
    ||||||||||||||||| | ||| ||||||| |||||||||||||||||    
T  22290719 ttttttagtgagagaaacttcaatttctttttaagttttctttctcttt 22290767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 25162439 - 25162515
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||  | ||||  |||||||||  |||| ||||||||||||||||    
T  25162439 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttgtttcatattgaaagatc 25162515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 541
Target Start/End: Complemental strand, 39917456 - 39917393
Alignment:
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| ||||||||||||| ||| ||||||  |||||||||  |||| ||||||||||||||||    
T  39917456 tcttgtacgacgttgtttgatttt-cgtcttcgtgcggtgttcatttgattcatattgaaagatc 39917393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 53808170 - 53808122
Alignment:
Q  263 ttttttagtgagagaaattccaacttct-tttaagttttctttctcttt 310  Q
    ||||||||||||||||| |||||||||| | ||||||||| ||||||||    
T  53808170 ttttttagtgagagaaactccaacttctctctaagttttccttctcttt 53808122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 1e-49; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 383 - 558
Target Start/End: Original strand, 3240285 - 3240461
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt-tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttg 481  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||| || |  | ||||||||| |||| |||||    
T  3240285 tcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgtgtacatcattgtgttgttcgtcgtcttg 3240384  T
Q  482 tgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    | ||||||||||||| || |||| |||||| ||||||||||||||| ||||||||||||| |||| |||||||||||    
T  3240385 tacgacgttgtttgatttcgcgtgttgttgtggtgtttgtttggttaatattgaaagatcggcttcagtcaatcaca 3240461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 290 - 558
Target Start/End: Complemental strand, 18890983 - 18890707
Alignment:
Q  290 ttttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatca 385  Q
    |||||||||||||| |||||| |||| |  || ||||||| |||||||||| ||| |||| ||||||||    |||||||  ||||||   ||||| |||    
T  18890983 ttttaagttttcttcctctttcacttatcgagaaggggtgattttaggtcaatttttgacctagaatcactcatctgcatcttttttcccctttctttca 18890884  T
Q  386 atctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgc 484  Q
    ||||||||||||||||| |||||  ||||||| || |||||||||||||| |||||||| ||||||| |||||||||||||||||| |||| ||||||||    
T  18890883 atctaaataagtgattttcacatgcatcaagtttt-tcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgc 18890785  T
Q  485 gacgttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||||||||||| || || | || |    || |||||| ||||||||| ||||||||||||||||| || ||||||||    
T  18890784 gacgttgtttgatttcgcattttttgttgtgtggtgttcgtttggttcgtattgaaagatcagcttcagacaatcaca 18890707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 263 - 555
Target Start/End: Complemental strand, 24099566 - 24099266
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca--- 358  Q
    ||||||||||||||||| | |||||||| | || ||||||||||||||| | |  |  || |||| ||| ||||||||||||| |||| ||||||||       
T  24099566 ttttttagtgagagaaacttcaacttctctctaggttttctttctctttcaatcatcgagtaggg-tggctttaggtcatttt-tgacctagaatcaccc 24099469  T
Q  359 -tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt-----tcgtgattttgtcgtctg 452  Q
     |||||||| | ||||   ||||| || || ||||||||||||||||||||| |||||||||| |||||| ||||||     ||||||||| ||||||||    
T  24099468 ctctgcattttgtttcctctttctttcgatttaaataagtgatttccacatagatcaagtgttttcttttttgttttattcttcgtgatttcgtcgtctg 24099369  T
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtca 552  Q
    |||||||||||||||||| |||| || ||| |  |||||||||| || || |||||||||||||||  ||||||||||||||||| |||||||| |||||    
T  24099368 agtgcgacgttgtgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttcatttggttcatattgaaaaatcagcttcagtca 24099269  T
Q  553 atc 555  Q
    |||    
T  24099268 atc 24099266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 264 - 559
Target Start/End: Original strand, 15344090 - 15344390
Alignment:
Q  264 tttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca---- 358  Q
    |||||||||||||||| |||||||||| | ||||||||  |||||||| |||  |  ||||||||||||||||||||||| | |||| || ||| |        
T  15344090 tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc 15344189  T
Q  359 tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctgagtgc 457  Q
    |||||||  ||||||   ||| |||  ||||||||||||||||| |||| |||||||| ||| ||||||||| ||||| || |||||||||||| |||||    
T  15344190 tctgcatcttttttcccctttatatggatctaaataagtgattttcacaaatatcaagcgttttcttttgtgattttttgtaattttgtcgtctaagtgc 15344289  T
Q  458 gacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcac 557  Q
     || ||||||||| |||| ||||||||| ||| |||||| ||  | ||||||||||||||| | |||||||||||||||||||||  || ||||||||||    
T  15344290 aaccttgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcg-ttggttcatattgaaagatcaagttcagtcaatcac 15344388  T
Q  558 ag 559  Q
    ||    
T  15344389 ag 15344390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 264 - 559
Target Start/End: Original strand, 15433155 - 15433455
Alignment:
Q  264 tttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca---- 358  Q
    |||||||||||||||| |||||||||| | ||||||||  |||||||| |||  |  ||||||||||||||||||||||| | |||| || ||| |        
T  15433155 tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc 15433254  T
Q  359 tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctgagtgc 457  Q
    |||||||  ||||||   ||| |||  ||||||||||||||||| |||| |||||||| ||| ||||||||| ||||| || |||||||||||| |||||    
T  15433255 tctgcatcttttttcccctttatatggatctaaataagtgattttcacaaatatcaagcgttttcttttgtgattttttgtaattttgtcgtctaagtgc 15433354  T
Q  458 gacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcac 557  Q
     || ||||||||| |||| ||||||||| ||| |||||| ||  | ||||||||||||||| | |||||||||||||||||||||  || ||||||||||    
T  15433355 aaccttgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcg-ttggttcatattgaaagatcaagttcagtcaatcac 15433453  T
Q  558 ag 559  Q
    ||    
T  15433454 ag 15433455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 264 - 559
Target Start/End: Original strand, 15524459 - 15524759
Alignment:
Q  264 tttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca---- 358  Q
    |||||||||||||||| |||||||||| | ||||||||  |||||||| |||  |  ||||||||||||||||||||||| | |||| || ||| |        
T  15524459 tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc 15524558  T
Q  359 tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctgagtgc 457  Q
    |||||||  ||||||   ||| |||  ||||||||||||||||| |||| |||||||| ||| ||||||||| ||||| || |||||||||||| |||||    
T  15524559 tctgcatcttttttcccctttatatggatctaaataagtgattttcacaaatatcaagcgttttcttttgtgattttttgtaattttgtcgtctaagtgc 15524658  T
Q  458 gacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcac 557  Q
     || ||||||||| |||| ||||||||| ||| |||||| ||  | ||||||||||||||| | |||||||||||||||||||||  || ||||||||||    
T  15524659 aaccttgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcg-ttggttcatattgaaagatcaagttcagtcaatcac 15524757  T
Q  558 ag 559  Q
    ||    
T  15524758 ag 15524759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 263 - 558
Target Start/End: Complemental strand, 1239709 - 1239405
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca--- 358  Q
    ||||| ||||||||||| | |||||||| | ||||||||| |||||||   ||  |  |||||||||||||||||||| || | |||| || |||||       
T  1239709 tttttaagtgagagaaacttcaacttctctctaagttttccttctcttccgctcatcgaggaggggtggttttaggtccttctttgacctaaaatcaccc 1239610  T
Q  359 -tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttc-----gtgattttgtcgtctg 452  Q
     |||||||  ||||||   ||||  || ||||||||||||||||| |||| |||||| ||||| ||||||||||||||      ||||||| |||||||     
T  1239609 ctctgcatcttttttcccctttcgttcgatctaaataagtgattttcacaaatatcaggtgttttcttttgtgtttttttttttgtgatttcgtcgtcta 1239510  T
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtca 552  Q
    |||||||| ||||||||| | || ||||||||| |||||||||| || || ||||||||||||||| | ||||||||||||||||||||| ||| |||||    
T  1239509 agtgcgaccttgtgttgttcatcgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcg-ttggttcatattgaaagatcaacttcagtca 1239411  T
Q  553 atcaca 558  Q
    ||||||    
T  1239410 atcaca 1239405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 275 - 558
Target Start/End: Complemental strand, 8443814 - 8443519
Alignment:
Q  275 agaaattccaacttctttt-aagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca---tctgcattctt- 369  Q
    ||||||||||| ||||||| || |||||||||||||| | |  | ||| |||||||||||||||||||||| | |||||||||||   |||||||  ||     
T  8443814 agaaattccaatttctttttaaattttctttctctttcattcatcaag-aggggtggttttaggtcattttttaacttagaatcaccatctgcatctttc 8443716  T
Q  370 -tttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgt--------gattttgtcgtctgagtgcgac 460  Q
     ||||   ||||| || |||||||||||||||||||||||||||| || ||| ||||||||||||||  |        ||||| ||||||| ||||||      
T  8443715 ttttcccctttctttcgatctaaataagtgatttccacatatatccag-gttttcttttgtgttttttttttttttatgatttcgtcgtctaagtgcggt 8443617  T
Q  461 gttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    |||||||||| |||| ||||||||| |||||||||| |  |||||||||||| ||||| ||||||||||  ||||||||||| ||| |||||||||||    
T  8443616 gttgtgttgttcgtcgtcttgtgcggcgttgtttgattccgcgtcttgttgcagtgttcgtttggttcaatttgaaagatcaacttcagtcaatcaca 8443519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 386 - 542
Target Start/End: Original strand, 8826121 - 8826276
Alignment:
Q  386 atctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcg 485  Q
    |||||||||||||||||  ||| ||||||||| || |||||||| ||||||||||||| |||||||||||||  |||| |||||| |||| ||||||| |    
T  8826121 atctaaataagtgatttttacacatatcaagttttttcttttgtttttttcgtgatttcgtcgtctgagtgcagcgttatgttgttcgtcgtcttgtgtg 8826220  T
Q  486 acgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
     |||||| |||||| | |||||||||||||| || |||| |||||||||||| ||||    
T  8826221 gcgttgtgtgaattcgtgtcttgttgcggtg-ttctttgattcatattgaaatatca 8826276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 7883427 - 7883266
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| || |||||||||||||| ||||||| ||| ||| |||||| ||||||||||| ||||    
T  7883427 ttttctttcaatctaaataagtggttttcacatctatcaagtttt-tcttttgtgttttttgtgatttcgtcatctaagtgcggcgttgtgttgttcgtc 7883329  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||||| |   |||||| ||  |||||||| ||||||||||||  |||||||||||||||||    
T  7883328 gtcttgtgcggc---gtttgatttcacgtcttgtcgcggtgtttgttcagttcatattgaaagatc 7883266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 385 - 558
Target Start/End: Original strand, 5333337 - 5333510
Alignment:
Q  385 aatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtg 483  Q
    |||| ||| |||||||||  ||||||||||||| || | |||||| ||||| |  ||||| ||| ||||||||||  |||||||||| |||| |||||||    
T  5333337 aatcaaaacaagtgatttatacatatatcaagttttat-ttttgtattttttcaagatttcgtcatctgagtgcggtgttgtgttgttcgtcgtcttgtg 5333435  T
Q  484 cgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    ||  ||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||||| ||| |||||||||||    
T  5333436 cggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctattgaaagatcaacttcagtcaatcaca 5333510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 431 - 558
Target Start/End: Complemental strand, 1236831 - 1236705
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcat 530  Q
    ||||| ||||||| ||||||| |||||||| ||||||||| |||  ||||||||| |||||||||| || || ||||||||||||||| | |||||||||    
T  1236831 ttttttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcg-ttggttcat 1236733  T
Q  531 attgaaagatcagctttagtcaatcaca 558  Q
    |||||||||||| ||| |||||||||||    
T  1236732 attgaaagatcaacttcagtcaatcaca 1236705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 368 - 490
Target Start/End: Complemental strand, 40619268 - 40619146
Alignment:
Q  368 tttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgt 467  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||| ||   |||||||||||| |||||||  |||||| |||||| ||||||||    
T  40619268 tttttctcttttctatcaatctaaataagtgattttcacatatatcaagtttttctttttgtgttttttgtgatttcatcgtctaagtgcggcgttgtgt 40619169  T
Q  468 tgtccgtcatcttgtgcgacgtt 490  Q
    |||  ||| ||||||| ||||||    
T  40619168 tgtttgtcgtcttgtgtgacgtt 40619146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 376 - 541
Target Start/End: Original strand, 23230546 - 23230707
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| || || |||||||| || |||||||||||||| ||||||| ||||||| |||||| || | |||||| ||||    
T  23230546 ttttctttcaatctaaataagtggttttcatatctatcaagttttttcttttgtgttttt-gtgatttcgtcgtctaagtgcggcgatttgttgttcgtc 23230644  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||||| |   |||||| || ||||||||| ||||||||||||| |||| ||||| ||||||    
T  23230645 gtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatc 23230707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 368 - 493
Target Start/End: Original strand, 14585593 - 14585718
Alignment:
Q  368 tttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtg 466  Q
    ||||||| |||||| |||||||||||||||||||| |||||| ||||||| || ||||| |||||||| | |||||| ||||||| || |||||||||||    
T  14585593 tttttctcttttctttcaatctaaataagtgattttcacatacatcaagtttt-tctttcgtgttttttcttgatttcgtcgtcttagcgcgacgttgtg 14585691  T
Q  467 ttgtccgtcatcttgtgcgacgttgtt 493  Q
    |||| |||| ||||||||| |||||||    
T  14585692 ttgttcgtcgtcttgtgcggcgttgtt 14585718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 377 - 558
Target Start/End: Original strand, 41896413 - 41896598
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttt-tcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    ||||| |||||||||||||||||||| |||||  ||||||| || ||||| ||||||| |||||||||  |||||| ||| ||||||||||||||  |||    
T  41896413 tttctttcaatctaaataagtgattttcacatccatcaagtttt-tctttcgtgttttttcgtgatttcatcgtcttagtacgacgttgtgttgttggtc 41896511  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgt----tgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
     ||||||||| |||||||||| ||  | | || |    ||||||||| ||||||||| ||||||||||||||||| || ||||||||    
T  41896512 gtcttgtgcggcgttgtttgatttcacatattttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcaca 41896598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 260 - 463
Target Start/End: Original strand, 8980977 - 8981176
Alignment:
Q  260 tagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca 358  Q
    |||||||||||||||||||| |||||||||| | ||||||||| ||||| || ||| ||  ||||||||||||||||||||||||| |||| || |||||    
T  8980977 tagttttttagtgagagaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatca 8981076  T
Q  359 ----tctgcattcttttt-ctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctg 452  Q
        | ||||| |||||| |  |||||| ||||||||||||||||||||           ||||||| ||||||||| ||||||||||||| ||||||||    
T  8981077 cccctatgcatcctttttccccttttctttcaatctaaataagtgattt-----------aagtgttttcttttgtgctttttcgtgatttcgtcgtctg 8981165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 397 - 556
Target Start/End: Complemental strand, 471333 - 471176
Alignment:
Q  397 tgatttccacatatatcaagtgttctcttttgtgttttt-cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttg 495  Q
    |||||||| ||| |||||||| || |||||| ||||||| | |||||||||||||  |||||| || |||||||| |||| ||| ||||||||||   ||    
T  471333 tgatttcctcatgtatcaagttttttcttttatgttttttcatgattttgtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgcgacgtt---tg 471237  T
Q  496 aatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    | |||| |||||||||||||| | ||||||||| ||||||||||||| ||| | |||||||    
T  471236 attttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatca 471176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 461 - 559
Target Start/End: Complemental strand, 29617379 - 29617281
Alignment:
Q  461 gttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    |||||||||| |||| ||||||||| || ||||||| || |||||||||||||||||| ||||||||| |||||||||| || ||| ||||||||||||    
T  29617379 gttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaagaccaacttcagtcaatcacag 29617281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 431 - 556
Target Start/End: Original strand, 34609787 - 34609911
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcat 530  Q
    |||| |||||||| ||||||| |||||| ||||| ||||| | || |||||||||||||| ||||| |||| |||||||||||||||| ||||| |||      
T  34609787 ttttccgtgatttcgtcgtctaagtgcggcgttgggttgttcctcgtcttgtgcgacgttatttgattttgtgtcttgttgcggtgttcgtttgtttc-c 34609885  T
Q  531 attgaaagatcagctttagtcaatca 556  Q
    |||||||||||| ||| |||||||||    
T  34609886 attgaaagatcaacttcagtcaatca 34609911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 260 - 541
Target Start/End: Complemental strand, 17693922 - 17693639
Alignment:
Q  260 tagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca 358  Q
    |||||||||||||||||||| |||||||||| | |||  |||||||||| ||   |  || ||||||||| ||||||||||||||| |||| ||||||||    
T  17693922 tagttttttagtgagagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggttgttttaggtcatttt-tgacctagaatca 17693824  T
Q  359 tc----tgcattctttttctgt-tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctga 453  Q
    ||    | |||  |||||||   ||||| ||||||||||||| || |||  ||| ||||||||| ||  ||||||  ||||  ||||||| ||||||| |    
T  17693823 tccctctacatcttttttctcaatttctttcaatctaaataaatgttttgaacaaatatcaagtttttccttttgcattttatgtgatttcgtcgtctaa 17693724  T
Q  454 gtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||  ||||| |||| |||| ||||||||| |   |||||| ||||||| |||| ||||||||||||| |||| |||| |||||||    
T  17693723 gtgcggtgttgtattgttcgtcttcttgtgcggc---gtttgattttgcgttttgtcgcggtgtttgtttagttcctattaaaagatc 17693639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 430 - 558
Target Start/End: Complemental strand, 26469344 - 26469216
Alignment:
Q  430 gtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttca 529  Q
    |||||| |||||||||| |||  ||||||||||| |||||| | || |||||||| ||||||||||| ||   |||||||||| ||||| |||||||||     
T  26469344 gttttttgtgattttgttgtccaagtgcgacgttatgttgttcatcgtcttgtgcaacgttgtttgacttcatgtcttgttgcagtgttcgtttggttcc 26469245  T
Q  530 tattgaaagatcagctttagtcaatcaca 558  Q
    |||||||||||||  |||||| |||||||    
T  26469244 tattgaaagatcaaatttagttaatcaca 26469216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 387 - 539
Target Start/End: Original strand, 34492973 - 34493127
Alignment:
Q  387 tctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-cgtgatttt--gtcgtctgagtgcgacgttgtgttgtccgtcatcttgtg 483  Q
    ||||||||||||||||| |||| |||||||| || ||| |||| ||||| | ||||||   |||||| ||||||||||||||||||| |||  || ||||    
T  34492973 tctaaataagtgatttctacat-tatcaagttttttctattgtattttttcatgatttctggtcgtcagagtgcgacgttgtgttgttcgttgtcatgtg 34493071  T
Q  484 cgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaaga 539  Q
    ||  ||||||||||||||  ||||||||||||||| ||||||||| || |||||||    
T  34493072 cggtgttgtttgaatttgtctcttgttgcggtgttcgtttggttcctactgaaaga 34493127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 431 - 556
Target Start/End: Original strand, 39657404 - 39657533
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgt----tgcggtgtttgtttggt 526  Q
    ||||||||||||| ||||||| ||||||||||||| |||| |||| ||||||||| |||||||||| || || |||| |    ||||||||| |||||||    
T  39657404 tttttcgtgatttcgtcgtcttagtgcgacgttgtattgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggt 39657503  T
Q  527 tcatattgaaagatcagctttagtcaatca 556  Q
    || ||||||||||| ||||| || ||||||    
T  39657504 tcgtattgaaagattagcttcagacaatca 39657533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 320 - 541
Target Start/End: Complemental strand, 20553493 - 20553266
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatcatctg----cattctttttctgttttctatcaatctaaataagtgatttccacatatatcaa 415  Q
    ||||||||||||||||| |||||||  ||| |||||||| |      |||| ||||||  |||||| |||||||||||||||||||| ||||| ||| ||    
T  20553493 aggaggggtggttttagatcatttttggacctagaatcaccccacaacattttttttcccttttctttcaatctaaataagtgattttcacatctatgaa 20553394  T
Q  416 gtgttctcttttgtgtttttc-----gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgtt 510  Q
    || ||  |||||||||||||      ||||||| ||||||| |||||| |||| |||||| |||| |||| |||| ||||   ||| |||| |||||||     
T  20553393 gtttttccttttgtgtttttttttttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttatgcggcgtt---tgattttgtgtcttgtc 20553297  T
Q  511 gcggtgtttgtttggttcatattgaaagatc 541  Q
    ||||||||||||  |||| ||||||||||||    
T  20553296 gcggtgtttgttcagttcctattgaaagatc 20553266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 437 - 556
Target Start/End: Complemental strand, 14916316 - 14916197
Alignment:
Q  437 gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaa 536  Q
    ||||||| |||||||| ||||| ||||| |||||||||| | ||||||| |  ||||||| ||   |||||||||||||||| |||||||||||||||||    
T  14916316 gtgatttcgtcgtctgggtgcggcgttgcgttgtccgtccttttgtgcggcactgtttgatttcatgtcttgttgcggtgttcgtttggttcatattgaa 14916217  T
Q  537 agatcagctttagtcaatca 556  Q
    ||| || ||| | |||||||    
T  14916216 agaccaacttcaatcaatca 14916197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 322 - 541
Target Start/End: Complemental strand, 20559990 - 20559769
Alignment:
Q  322 gaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagt 417  Q
    ||||||||||||||| |||||||  ||| ||||||||    ||| |||| |||| |  |||||| |||||||||||||||||||| ||||| ||||||||    
T  20559990 gaggggtggttttagatcatttttggacctagaatcacccctctacatt-ttttccccttttctttcaatctaaataagtgattttcacatctatcaagt 20559892  T
Q  418 gttctcttttg--tgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggt 515  Q
     ||  ||||||  | ||||| ||||||| ||||||| |||||  |||| |||||| |||| ||||||||| |    ||||| |||| ||||||  |||||    
T  20559891 ttttccttttgtattttttttgtgatttcgtcgtctaagtgcatcgttttgttgttcgtcgtcttgtgcggc---ctttgattttgtgtcttggcgcggt 20559795  T
Q  516 gtttgtttggttcatattgaaagatc 541  Q
    |||||||  |||| ||||||||||||    
T  20559794 gtttgttcagttcctattgaaagatc 20559769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 322 - 541
Target Start/End: Complemental strand, 20571552 - 20571331
Alignment:
Q  322 gaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagt 417  Q
    ||||||||||||||| |||||||  ||| ||||||||    ||| |||| |||| |  |||||| |||||||||||||||||||| ||||| ||||||||    
T  20571552 gaggggtggttttagatcatttttggacctagaatcacccctctacatt-ttttccccttttctttcaatctaaataagtgattttcacatctatcaagt 20571454  T
Q  418 gttctcttttg--tgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggt 515  Q
     ||  ||||||  | ||||| ||||||| ||||||| |||||  |||| |||||| |||| ||||||||| |    ||||| |||| ||||||  |||||    
T  20571453 ttttccttttgtattttttttgtgatttcgtcgtctaagtgcatcgttttgttgttcgtcgtcttgtgcggc---ctttgattttgtgtcttggcgcggt 20571357  T
Q  516 gtttgtttggttcatattgaaagatc 541  Q
    |||||||  |||| ||||||||||||    
T  20571356 gtttgttcagttcctattgaaagatc 20571331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 383 - 539
Target Start/End: Original strand, 21237704 - 21237852
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgt 482  Q
    ||||||||||||||||||||||| |||||||||||||| || ||||||||       |||| ||||||| |||||    || |  | || ||||||||||    
T  21237704 tcaatctaaataagtgatttccaaatatatcaagtgttttcctttgtgtt-------atttcgtcgtctaagtgcagatttttcctatc-gtcatcttgt 21237795  T
Q  483 gcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaaga 539  Q
    | | |||||||||| || |||||||||||| ||||| ||||||||||||||||||||    
T  21237796 ggggcgttgtttgacttcgcgtcttgttgcagtgttcgtttggttcatattgaaaga 21237852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 376 - 470
Target Start/End: Complemental strand, 43834187 - 43834093
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgt 470  Q
    |||||| |||||||||||||||||| |||||||||||||||||| || || ||| |||||||| ||||  |||||| |||||  |||||||||||    
T  43834187 ttttctttcaatctaaataagtgatatccacatatatcaagtgtccttttgtgtttttttcgtaatttcatcgtctaagtgccgcgttgtgttgt 43834093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 341 - 546
Target Start/End: Original strand, 6831453 - 6831669
Alignment:
Q  341 ttttctgacttagaatcatc---tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt-- 435  Q
    |||| |||||||||||||||   ||||| |||||| |  ||||| || ||  |||||||||| || |||||||||||||| || ||||||||||||||      
T  6831453 ttttttgacttagaatcatcctctgcatcctttttttcctttctttcgattcaaataagtgaatttcacatatatcaagttttttcttttgtgttttttt 6831552  T
Q  436 ------cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttca 529  Q
          |||||||| |||||||||||||  |||| |||||    || ||||||| ||| |||| | | ||| | ||||||||| |||| |||||| ||||    
T  6831553 tttcttcgtgatttcgtcgtctgagtgcagcgttatgttgcttctcgtcttgtgtgacattgtcttattttacatcttgttgcagtgtctgtttgattca 6831652  T
Q  530 tattgaaagatcagctt 546  Q
    |||||||||||||||||    
T  6831653 tattgaaagatcagctt 6831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 540
Target Start/End: Complemental strand, 24419342 - 24419202
Alignment:
Q  400 tttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatt 499  Q
    |||||||||||||||| | || ||||||||||| || || ||||  ||||||||||||| ||||||||| | |||| | ||||| ||| |||||||| ||    
T  24419342 tttccacatatatcaaattttttcttttgtgttgtttgtaatttcttcgtctgagtgcggcgttgtgtttttcgtcgtattgtgagacattgtttgattt 24419243  T
Q  500 tgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
     | || | |||| | ||||  ||||||||||||||||||||    
T  24419242 cgtgtttggttgtgatgttcatttggttcatattgaaagat 24419202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 35580470 - 35580546
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| |||||||||||||||||||| ||| |||||| |||||||||| ||||| ||||||||||| ||||    
T  35580470 tgttgttcgtcgtcttgtgcgacgttgtttgattttccgtcttcttgcggtgttcgtttgattcatattgaatgatc 35580546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 481 - 559
Target Start/End: Original strand, 8981167 - 8981245
Alignment:
Q  481 gtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    ||||| |||| ||||| || |||||||||||||||||| ||||| || |||||||||||||||| | ||||||||||||    
T  8981167 gtgcggcgttttttgatttcgcgtcttgttgcggtgttcgtttgtttgatattgaaagatcagcgtcagtcaatcacag 8981245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 377 - 554
Target Start/End: Complemental strand, 20227472 - 20227293
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttc---gtgattttgtcgtctgagtgcgacgttgtgttgtccg 473  Q
    ||||| |||||||||||||||| |||||||||||| |||   || || | ||| ||||||   |||||||  ||||||||||||| |||||| |||| ||    
T  20227472 tttctttcaatctaaataagtggtttccacatataccaaactttttcctgtgtttttttcttcgtgatttcatcgtctgagtgcgtcgttgtattgttcg 20227373  T
Q  474 tcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
    || |||| ||||||||||||||| ||  | | ||||||  || |||||||||||  |||| ||||||| |||| |||||||    
T  20227372 tcgtcttctgcgacgttgtttgatttcacattttgttg-tgtatttgtttggtttctattaaaagatcggcttaagtcaat 20227293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 376 - 541
Target Start/End: Original strand, 3673346 - 3673505
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||  ||||||||   ||||||  |||||||  |||| ||||||| ||||||| ||||||  |||||||||| ||||    
T  3673346 ttttctttcaatctaaataagtggttatcacatata---agtgtttccttttgttctttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtc 3673442  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
     |||| ||||    ||||||| || | ||||||||||||||||  ||| |||| ||||||||||||    
T  3673443 gtcttatgcgg---tgtttgatttcgtgtcttgttgcggtgttcctttagttcctattgaaagatc 3673505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 320 - 559
Target Start/End: Complemental strand, 7677528 - 7677290
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcat-tctttttctgttttctatcaatctaaataagtgatttccacatatatca 414  Q
    ||||||||||||||||||||||||| |||| ||||||||    ||| ||| || ||  || |||||| || |||||||||| |  ||| |||||||||||    
T  7677528 aggaggggtggttttaggtcattttttgacctagaatcacccctctacatctcattcact-ttttctttcgatctaaataaattgttttcacatatatca 7677430  T
Q  415 agtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcgg 514  Q
    ||| || | |||||||||||| |||||||  |||||| | |||| ||||||||||| |||| ||||||||  |    ||||| || ||||||||| ||||    
T  7677429 agttttgt-ttttgtgttttt-gtgatttcatcgtctaattgcggcgttgtgttgttcgtcgtcttgtgctgc---atttgatttcgcgtcttgtcgcgg 7677335  T
Q  515 tgtttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    |||| ||||||||| || ||||| |||| | | ||||||| ||||    
T  7677334 tgttcgtttggttcctactgaaatatcaacatcagtcaattacag 7677290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 316 - 541
Target Start/End: Complemental strand, 14545155 - 14544928
Alignment:
Q  316 gttaaggaggggtggttttaggtcattttctgacttagaatca-----tctgcat-tctttttctgttttctatcaatctaaataagtgatttccacata 409  Q
    |||||||| | |||||||||||||||||| |||| || |||||     ||| ||| | ||||||| |||||| |||||||||||||||| ||| ||||||    
T  14545155 gttaaggatgagtggttttaggtcattttttgacctaaaatcaccctctctacatctttttttctcttttctttcaatctaaataagtggttttcacata 14545056  T
Q  410 tatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgt 509  Q
    ||||||   ||  ||||||| ||||| ||||||| ||||||| | |||| |||||| ||||  ||| ||||||| | |   |||||| ||  ||||||||    
T  14545055 tatcaaaattttccttttgtattttt-gtgatttcgtcgtctaattgcggcgttgttttgttagtcgtcttgtgtggc---gtttgatttcacgtcttgt 14544960  T
Q  510 tgcggtgtttgtttggttcatattgaaagatc 541  Q
     ||||||||  ||| |||| ||||||||||||    
T  14544959 cgcggtgttcatttagttcctattgaaagatc 14544928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 259 - 540
Target Start/End: Complemental strand, 27110774 - 27110491
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||||||| |||||||||||| |||||||||| | |||  |||||||||| || | |  |  | || |||||||||||||||||||| |||  || ||||    
T  27110774 ctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggtggttttaggtcattttttgatctaaaatc 27110675  T
Q  358 a----tctgcattcttttt-ctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctg 452  Q
    |    ||| |||  ||||| || |||||| |||||||||||||||| | | |||||||||||||| ||  ||||||||||||| || |||| ||| |||     
T  27110674 acacatctacatcttttttactcttttctttcaatctaaataagtggtcttcacatatatcaagtttttccttttgtgttttt-gtaatttcgtcatcta 27110576  T
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    | |||  ||||||||||   ||| ||||||| | |   |||||| |||||||||||| || ||||| |||| |||||| |||||||||    
T  27110575 attgcagcgttgtgttggtagtcgtcttgtgtggc---gtttgattttgcgtcttgtcgcagtgttcgtttagttcatgttgaaagat 27110491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 376 - 542
Target Start/End: Complemental strand, 27498551 - 27498388
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| ||||| ||||||||||||||  ||||||||||||| ||  ||||| ||| ||| || |||| ||||||| |||| | | ||||||||| ||||    
T  27498551 ttttctttcaatttaaataagtgatttttacatatatcaagtttttccttttatgtattttgtaatttcgtcgtctaagtgtgccattgtgttgttcgtc 27498452  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
     |||||||||||    ||||| || ||||||||| | ||||||  |||  ||| |||||||||||||    
T  27498451 gtcttgtgcgac---atttgatttcgcgtcttgtcgtggtgttcatttaattcctattgaaagatca 27498388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 40211492 - 40211327
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgt---ttttcgtgattttgtcgtctgagtgcgacgttgtgttgtcc 472  Q
    |||||| |||||||||||||| | ||| ||||| |||||||| || ||||||||||   |||| ||||||| ||||||| | || | ||||||||||| |    
T  40211492 ttttctttcaatctaaataagcggttttcacatctatcaagtattttcttttgtgtttttttttgtgatttcgtcgtctaaatgtggcgttgtgttgttc 40211393  T
Q  473 gtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||| |||| ||   |  ||||||| || |||| |||| ||||||||||||| |||  ||||||||||||    
T  40211392 gtcgtcttatg---cagtgtttgatttcgcgtattgtcgcggtgtttgtttagtttctattgaaagatc 40211327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 433 - 495
Target Start/End: Complemental strand, 5917761 - 5917698
Alignment:
Q  433 tttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatc-ttgtgcgacgttgtttg 495  Q
    ||||||||||| ||||||| |||||||||||||||||| |||| || |||||||||||||||||    
T  5917761 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctttgtgcgacgttgtttg 5917698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 258 - 554
Target Start/End: Complemental strand, 25191377 - 25191079
Alignment:
Q  258 tctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaat 356  Q
    |||||||||||||||||||||| |||||||||| | |||  |||||||||| |||  |  |  ||||| |||| |||||||||||||| |||| ||||||    
T  25191377 tctagttttttagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggtgattttaggtcattttttgacctagaat 25191278  T
Q  357 ca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg--tttttcgtgattttgtcgtc 450  Q
    ||    ||| |||  ||||||  |||||| ||||  |||||||||||||| |||| ||  ||||| || ||| || |   ||||| || |||| || |||    
T  25191277 cacccatctacatcttttttcccttttctttcaaattaaataagtgattttcacaaat--caagttttttctatttttctttttttgtaatttcgttgtc 25191180  T
Q  451 tgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagt 550  Q
    | ||| |  ||||||||||| |||| ||||||||| ||||   ||| || || | |||| |||||||||||||  ||| ||||||||||||||| | |||    
T  25191179 taagtacagcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgctttttgtcgcggtgtttgtttatttcctattgaaagatcagcatcagt 25191083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 259 - 554
Target Start/End: Complemental strand, 45446121 - 45445823
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||||||| |||||||||||| |||||||||| | |||  |||||||||| ||   |  |  |||| |||| |||||| |||||||| |||| |||||||    
T  45446121 ctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaagggtagttttatgtcattttttgacatagaatc 45446022  T
Q  358 atctg----cattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgt-ttttcgtgattttgtcgtctg 452  Q
    ||||     |||  ||||||  |||| | ||||| ||| |||||| ||| |||| ||||||||| || |||||| | | ||||  |||||| |||||||     
T  45446021 atctctctacatcttttttcccttttatttcaatttaattaagtggttttcacacatatcaagttttttcttttttttgtttttttgatttcgtcgtcta 45445922  T
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtca 552  Q
    ||| ||||||||| |||| |||| ||||||||| ||||   ||| || || | |||| |||||||||||||  ||| |||||||||||| || | |||||    
T  45445921 agtacgacgttgtattgttcgtcgtcttgtgcggcgtt---tgatttcgcattttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtca 45445825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 465 - 542
Target Start/End: Complemental strand, 44100005 - 44099928
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    |||||| |||| ||||||||| |||||||||| ||  |||||| ||||||||||  |||| |||||||||||||||||    
T  44100005 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaagatca 44099928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 342
Target Start/End: Complemental strand, 1236999 - 1236919
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcatt 342  Q
    ||||||||||||||||| | |||||||| | ||||||||| ||||||||  ||  || |||||||||||||||||||||||    
T  1236999 ttttttagtgagagaaacttcaacttctctctaagttttccttctctttcgctcattgaggaggggtggttttaggtcatt 1236919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 4808977 - 4809053
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||| ||||||  |||||||||  |||| ||||||||||||||||    
T  4808977 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 4809053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 259 - 435
Target Start/End: Complemental strand, 29617767 - 29617585
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttct-tttaagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaat- 356  Q
    ||||||||||||||||||||||| |||||||| | ||| |||| ||||||||| |||| |  | |||  || ||||||||||||||| |||| || |||     
T  29617767 ctagttttttagtgagagaaatttcaacttctctctaaattttgtttctctttcacttatcgaagagatgttgttttaggtcattttttgacctacaatc 29617668  T
Q  357 ---catctgca----ttctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt 435  Q
       ||||||||    |||||||||   ||||| || |||||||||| |||| | |||||||||||| |||| ||||||||||||||    
T  29617667 acccatctgcatattttctttttc--ctttctttc-atctaaataaatgatcttcacatatatcaaatgttttcttttgtgttttt 29617585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 465 - 536
Target Start/End: Original strand, 11196902 - 11196973
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaa 536  Q
    |||||| |||| ||||||||| |||||||||| ||| |||||| ||||||||||  |||| |||||||||||    
T  11196902 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaa 11196973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 542
Target Start/End: Complemental strand, 27747186 - 27747107
Alignment:
Q  463 tgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    |||||||| ||||||||||||||||  ||||||| ||   || |||||||||||||  |||| |||||||||||||||||    
T  27747186 tgtgttgttcgtcatcttgtgcgacagtgtttgatttcctgttttgttgcggtgttcatttgattcatattgaaagatca 27747107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 376 - 541
Target Start/End: Original strand, 28897613 - 28897773
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| ||| ||  |||||||||| ||| || |  ||||||| ||||||| || |||| | ||||||||||||||||  |||    
T  28897613 ttttctttcaatctaaataagtggttttcatgtatatcaagttttc-ctatgatgttttt-gtgatttcgttgtctaattgcgacgttgtgttgttagtc 28897710  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    ||| |||| | ||||   ||| || ||||||||| | |||||| |||| |||| ||||||||||||    
T  28897711 atcgtgtgtggcgtt---tgatttcgcgtcttgtcgtggtgttcgtttagttcctattgaaagatc 28897773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 425 - 541
Target Start/End: Original strand, 10377640 - 10377753
Alignment:
Q  425 tttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttg 524  Q
    ||||||||||| ||||||| || |||| |||||| ||||||||||| || | ||||||||| |   |||||| || |||| |||| | ||||||||||      
T  10377640 tttgtgttttttgtgatttcgttgtctaagtgcggcgttgtgttgttcgccgtcttgtgcggc---gtttgatttcgcgttttgtcgtggtgtttgttca 10377736  T
Q  525 gttcatattgaaagatc 541  Q
    |||| ||||||||||||    
T  10377737 gttcctattgaaagatc 10377753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 423 - 484
Target Start/End: Complemental strand, 28086953 - 28086892
Alignment:
Q  423 cttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgc 484  Q
    |||||||| |||| ||||||| ||||||| |||||  ||||||||||| |||||||||||||    
T  28086953 cttttgtgctttttgtgatttcgtcgtctaagtgctgcgttgtgttgttcgtcatcttgtgc 28086892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 554
Target Start/End: Original strand, 36033404 - 36033481
Alignment:
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
    |||||||||||||| ||||| ||| ||||||| || | |||||||||||||| |||||||| |  ||||||| |||||    
T  36033404 tcttgtgcgacgttatttgatttttcgtcttggtgtgatgtttgtttggttcctattgaaatactagctttaatcaat 36033481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 9619428 - 9619352
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  9619428 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9619352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 541
Target Start/End: Complemental strand, 23851553 - 23851489
Alignment:
Q  477 tcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||||||||||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  23851553 tcttgtgcgacgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 23851489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 31013881 - 31013781
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||||||| |||||||||||| |||||||||| | |||  |||||||||| ||   |  |  ||||||||||||||||||||||||| |||| |||||||    
T  31013881 ctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatc 31013782  T
Q  358 a 358  Q
    |    
T  31013781 a 31013781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 495
Target Start/End: Original strand, 2629007 - 2629070
Alignment:
Q  433 tttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatc-ttgtgcgacgttgtttg 495  Q
    ||||||||||| ||||| | ||||||||||| | |||||||||||| ||||||||| |||||||    
T  2629007 tttcgtgatttcgtcgttttagtgcgacgttattttgtccgtcatctttgtgcgacattgtttg 2629070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 540
Target Start/End: Original strand, 34611817 - 34611892
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    |||||| |||| ||||||||| |||||||||| ||| |||| |  |||||||||  |||| |||||||||||||||    
T  34611817 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattgaaagat 34611892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 541
Target Start/End: Complemental strand, 16247349 - 16247248
Alignment:
Q  437 gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaa 536  Q
    |||||||  |||||| |||||| ||||||||||| | || |||||||||||   |||||| ||  |||||||| |||||||| |||| |||| ||| |||    
T  16247349 gtgatttcttcgtctaagtgcggcgttgtgttgttcatcgtcttgtgcgac---gtttgatttcacgtcttgtcgcggtgttcgtttagttcctatggaa 16247253  T
Q  537 agatc 541  Q
    |||||    
T  16247252 agatc 16247248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 417
Target Start/End: Complemental strand, 26469377 - 26469343
Alignment:
Q  383 tcaatctaaataagtgatttccacatatatcaagt 417  Q
    |||||||||||||||||||| ||||||||||||||    
T  26469377 tcaatctaaataagtgattttcacatatatcaagt 26469343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 495
Target Start/End: Complemental strand, 12248735 - 12248670
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatctt-gtgcgacgttgtttg 495  Q
    ||||| ||||||| ||||||| |||||||| |||| |||| |||| |||| |||||||||||||||    
T  12248735 ttttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttg 12248670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 542
Target Start/End: Original strand, 16794305 - 16794382
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    |||||| |||| |||||||| |||| |||||| ||  ||| ||||| |||||||  |||| |||||||||||||||||    
T  16794305 tgttgttcgtcgtcttgtgcaacgtcgtttgatttcccgtattgttacggtgttcatttgattcatattgaaagatca 16794382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 542
Target Start/End: Original strand, 28239846 - 28239923
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatca 542  Q
    |||||| |||| ||||||||| |||||||||| |   ||| |||||||||||||  |||| || ||||||||||||||    
T  28239846 tgttgttcgtcgtcttgtgcggcgttgtttgattcctcgtattgttgcggtgttcatttgattaatattgaaagatca 28239923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 2655883 - 2655959
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||  |||||||||| ||  ||||||  |||||||||  |||| ||||||||||||||||    
T  2655883 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 2655959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 11464184 - 11464260
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| ||||||||| |||||||||| ||   |||||  |||||||||  |||| ||||||||||||||||    
T  11464184 tgttgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttcatttgattcatattgaaagatc 11464260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 540
Target Start/End: Original strand, 15889576 - 15889644
Alignment:
Q  472 cgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    |||| ||||||||| |||||||||| ||| | ||| |||||| ||||  |||| |||||||||||||||    
T  15889576 cgtcgtcttgtgcggcgttgtttgattttccttctggttgcgatgttcatttgattcatattgaaagat 15889644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 541
Target Start/End: Original strand, 36532906 - 36532986
Alignment:
Q  461 gttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||||||| |||| |||||||||  ||||||||| ||  | | |||||  ||||||| |||||||| ||||||||||||    
T  36532906 gttgtgttgttcgtcgtcttgtgcggtgttgtttgatttctcattttgttttggtgtttatttggttcctattgaaagatc 36532986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 482 - 546
Target Start/End: Complemental strand, 41060333 - 41060269
Alignment:
Q  482 tgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctt 546  Q
    |||||| |||||||| ||||| ||||||||||||||| |||||  | |||||||||  |||||||    
T  41060333 tgcgacattgtttgattttgcttcttgttgcggtgttcgtttgacttatattgaaaattcagctt 41060269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 537
Target Start/End: Complemental strand, 42448098 - 42448026
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaa 537  Q
    |||||| |||| ||||||||| | |||||||| ||| ||||||  |||||||||  |||| ||||||||||||    
T  42448098 tgttgttcgtcgtcttgtgcggcattgtttgatttttcgtcttcgtgcggtgttcatttgattcatattgaaa 42448026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 259 - 554
Target Start/End: Original strand, 1121 - 1419
Alignment:
Q  259 ctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatc 357  Q
    |||||||||||||||| |||| | |||||||| | ||| ||||||||||| ||   |  |  ||||| ||||||||||||||||||| |||| |||||||    
T  1121 ctagttttttagtgagtgaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatc 1220  T
Q  358 a----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctg 452  Q
    |    ||| | |  ||||||  |||||| ||| |||||||||||| ||| |||||||||||||| |||||||||||| ||||| |||||||  ||||||     
T  1221 acccctctacttcttttttcccttttctttcactctaaataagtggttttcacatatatcaagttttctcttttgtgtttttttgtgatttcttcgtcta 1320  T
Q  453 agtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtca 552  Q
    |||||| ||||||||||| |||| ||||||| | |   |||||| || |||||||||||||||||| |||| |||| |||||||||||| || | |||||    
T  1321 agtgcggcgttgtgttgttcgtcgtcttgtgtggc---gtttgatttcgcgtcttgttgcggtgttcgtttagttcctattgaaagatcggcatcagtca 1417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 320 - 558
Target Start/End: Original strand, 92939 - 93186
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatcatc----tgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaa 415  Q
    ||||||||||||||||||| ||||| |||| ||||||||||    |||||  |||||||  ||||| |||||||||||||||||||| | | ||||||||    
T  92939 aggaggggtggttttaggttattttttgacctagaatcatcctcgtgcatcttttttctcctttctttcaatctaaataagtgatttacgcttatatcaa 93038  T
Q  416 gtgttctcttttgtgttttt----cgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttga-atttgcgtcttgtt 510  Q
    || || ||||| || |||||    | |||||| |||||||||||||  |||||||||||  ||  ||||||||| |||||||||| ||| | ||||||||    
T  93039 gttttttctttcgttttttttcctcatgatttcgtcgtctgagtgctgcgttgtgttgtttgttgtcttgtgcggcgttgtttgatattcgtgtcttgtt 93138  T
Q  511 gcggtgtttgtttggttcatattgaaagatcagctttagtcaatcaca 558  Q
    | |||||| |||||||||||||||||||||| | || | |||||||||    
T  93139 gtggtgttcgtttggttcatattgaaagatcggtttcactcaatcaca 93186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 66; Significance: 8e-29; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 320 - 541
Target Start/End: Original strand, 15331 - 15554
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaa 415  Q
    ||||||||||||||||||||||||| |||| ||||||||    ||| |||  |||| |  |||||| |||||||||||||||| ||| || || | ||||    
T  15331 aggaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttccccttttctttcaatctaaataagtggttttcatatctttcaa 15430  T
Q  416 gtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggt 515  Q
    || ||  ||||||||||||| ||||||| ||| ||| ||||||  |||||||||| |||| ||||||||| |||  ||||| || ||||||||| |||||    
T  15431 gtttttccttttgtgttttttgtgatttcgtcatctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgt--tttgatttcgcgtcttgtcgcggt 15528  T
Q  516 gtttgtttggttcatattgaaagatc 541  Q
    |||||||   ||| ||||||||||||    
T  15529 gtttgttcatttcctattgaaagatc 15554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 250 - 470
Target Start/End: Original strand, 50554 - 50780
Alignment:
Q  250 tagccgactctagttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctga 348  Q
    |||||| | |||||||| ||||| |||||| |||||||||||| |||  |||||||||| ||   |  || |||||||||| |||||||||| ||| |||    
T  50554 tagccggccctagttttctagtgggagaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggtgattttaggtcactttttga 50653  T
Q  349 cttagaatcatc----tgcattctttttctg-ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattt 443  Q
    | ||||||||||    | |||  ||||||   |||||| |||||||||||||||| ||| ||||| |||||||| ||  |||||||||||||||||||||    
T  50654 cctagaatcatccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttcgtgattt 50753  T
Q  444 tgtcgtctgagtgcgacgttgtgttgt 470  Q
     ||||||| |||||| |||||||||||    
T  50754 cgtcgtctaagtgcggcgttgtgttgt 50780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 293 - 554
Target Start/End: Original strand, 7529 - 7791
Alignment:
Q  293 taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctgttttctatcaatc 388  Q
    ||||||||||||||| |||| |  |  ||||||| ||||||||||||||||| |||| ||||||||    ||||||| ||||| |   ||||| |||||     
T  7529 taagttttctttctcctttattcatcgaggagggatggttttaggtcattttttgacctagaatcactcatctgcat-cttttacccctttctttcaatt 7627  T
Q  389 taaataagtgatttccacatatatcaagtgttctcttttgtg-tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgac 487  Q
    |||||||||| ||| |||||||||||||| ||  |||||||| ||||| |||| |||||| |||||||||| |||||||||||  ||| ||||||| | |    
T  7628 taaataagtggttttcacatatatcaagtttttccttttgtgtttttttgtgaatttgtcatctgagtgcggcgttgtgttgtttgtcgtcttgtgtggc 7727  T
Q  488 gttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
       ||||||||| |||||||| ||| ||||| ||| | ||  ||||||||||||  ||| |||||||    
T  7728 ---gtttgaattcgcgtcttgatgcagtgttcgttagttttctattgaaagatccacttcagtcaat 7791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 376 - 541
Target Start/End: Complemental strand, 32937 - 32774
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgt-ttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| ||  ||||||||| |||| ||||||| ||||||| |||||| |||| |||||| |||    
T  32937 ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttttgtgatttcgtcgtctaagtgcggcgttttgttgttcgt 32838  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    | ||||||||| |   |||||| || ||||||||| ||||| ||||||  |||| ||||||||||||    
T  32837 cgtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtatttgttcagttcctattgaaagatc 32774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 558
Target Start/End: Complemental strand, 1982 - 1688
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttt-taagttttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatca--- 358  Q
    ||||||||||||||||| ||   ||||| | || |||||||| |||||| |||| |  |||||||||| | |||||||| ||| |||| ||||||||       
T  1982 ttttttagtgagagaaactctgtcttctctctacgttttcttcctctttcacttatcgaggaggggtgatattaggtcaatttttgacctagaatcacct 1883  T
Q  359 -tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgc 457  Q
     |||||||  ||||||   ||||| |||||||||||||||||||| |||||| ||||||| ||          | ||||||||||| ||||||| |||||    
T  1882 ctctgcatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaagtttt----------tctttcgtgatttcgtcgtcttagtgc 1793  T
Q  458 gacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtc--ttgttgcg--gtgtttgtttggttcatattgaaagatcagctttagtcaa 553  Q
    |||||| |||||| |||| |||||| || |||||||||| || || ||  |||||| |  ||||| ||||||||| ||||||||||||| ||| || |||    
T  1792 gacgttctgttgttcgtcgtcttgtccggcgttgtttgatttcgcatcttttgttgtgtagtgttcgtttggttcgtattgaaagatcaacttcagacaa 1693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 320 - 554
Target Start/End: Complemental strand, 72114 - 71878
Alignment:
Q  320 aggaggggtggttttaggtcattttctgacttagaatca----tctgcattctttttctg--ttttctatcaatctaaataagtgatttccacatatatc 413  Q
    ||||||||||||||||||||||||| |||| ||||||||    ||| ||| |||||||    |||||| |||||| ||||||||| ||| ||||| ||||    
T  72114 aggaggggtggttttaggtcattttttgacctagaatcaccattcttcat-ctttttcccccttttctttcaatccaaataagtggttttcacatctatc 72016  T
Q  414 aagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcg 513  Q
    |||| ||  | ||||||||||| ||||||| ||||||| |||||| ||||||||||| |||  |||||||   ||  |||||| ||  ||| |||| |||    
T  72015 aagtttttccatttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgttgtcttgtg---cggagtttgatttcacgttttgtcgcg 71919  T
Q  514 gtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
    |||||||||  |||| ||||||||||||  | |||||||||    
T  71918 gtgtttgttcagttcctattgaaagatctacattagtcaat 71878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 437 - 558
Target Start/End: Original strand, 5988 - 6109
Alignment:
Q  437 gtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaa 536  Q
    ||||||| ||||||||||||| | | |||||||| |||| ||||||||| |||||||||| || |||| |||||||||||||  ||||||||||||||||    
T  5988 gtgatttcgtcgtctgagtgcaatgatgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatattgaa 6087  T
Q  537 agatcagctttagtcaatcaca 558  Q
    |  | | ||| |||||||||||    
T  6088 atgttaacttcagtcaatcaca 6109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 412
Target Start/End: Original strand, 5895 - 5948
Alignment:
Q  359 tctgcattctttttctgttttctatcaatctaaataagtgatttccacatatat 412  Q
    |||||||  |||||||  ||||| ||||||||||||||||||||||||| ||||    
T  5895 tctgcatcttttttctcctttctttcaatctaaataagtgatttccacacatat 5948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 298 - 456
Target Start/End: Original strand, 12733 - 12895
Alignment:
Q  298 tttctttctcttttacttgttaaggaggggtggttttaggtcattttctgacttagaatcatctgcattc---tttttctg-ttttctatcaatctaaat 393  Q
    ||||||||||||| | |  | |||||| ||||||||||||||||||| |||| |||||||| |   || |   |||||||  |||||||||||| |||||    
T  12733 tttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcaccgctatacatatttttctccttttctatcaatttaaat 12832  T
Q  394 aagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtg 456  Q
    ||||| ||| |||||| ||||||||||   |||||||||||||||||||||||||||| ||||    
T  12833 aagtggttttcacatacatcaagtgtttcgttttgtgtttttcgtgattttgtcgtctaagtg 12895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 375 - 541
Target Start/End: Complemental strand, 10231 - 10069
Alignment:
Q  375 gttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgt 474  Q
    ||||||| || ||||||||||||| ||| |||||||||||||| ||  ||||||||||||| ||||||| ||||||| |||||| | |||| |||| |||    
T  10231 gttttctttccatctaaataagtggttttcacatatatcaagtttttccttttgtgttttt-gtgatttcgtcgtctaagtgcggctttgttttgttcgt 10133  T
Q  475 catcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    | ||||||||| |   |||||| || ||||||||| ||||||||  |||  ||| ||||||||||||    
T  10132 cgtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtgttcatttaattcctattgaaagatc 10069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 435
Target Start/End: Original strand, 37947 - 38005
Alignment:
Q  377 tttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgttttt 435  Q
    ||||| |||||||||||||||| ||| ||||||| |||||| ||  |||||||||||||    
T  37947 tttctttcaatctaaataagtggttttcacatatgtcaagtttttccttttgtgttttt 38005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 431 - 559
Target Start/End: Complemental strand, 92633 - 92505
Alignment:
Q  431 tttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcat 530  Q
    ||||| ||||||| |||||||||||| |  |||||||||  |  | |||||||||| ||||||||| ||  |||||||||| |||||| |||||||||||    
T  92633 ttttttgtgatttcgtcgtctgagtgtgttgttgtgttgctcaccgtcttgtgcgatgttgtttgatttcacgtcttgttgtggtgttcgtttggttcat 92534  T
Q  531 attgaaagatcagctttagtcaatcacag 559  Q
    ||||||||||||  |||||| ||||||||    
T  92533 attgaaagatcaattttagtaaatcacag 92505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 376 - 554
Target Start/End: Complemental strand, 2160 - 1987
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtgttgtccgtc 475  Q
    |||||| |||||||||||||||| |||| |||| |||||||| || |||||||||||||| |||||||  |||||| |||||| | || |||||| ||||    
T  2160 ttttctttcaatctaaataagtggtttc-acatctatcaagttttttcttttgtgttttt-gtgatttcatcgtctaagtgcggcattttgttgttcgtc 2063  T
Q  476 atcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaat 554  Q
     |||| || | |   |||||| || || |||||| ||||||||| ||| |||| ||||||||||||  | |||||||||    
T  2062 gtcttatgtggc---gtttgatttcgcatcttgtcgcggtgtttttttagttcctattgaaagatctacattagtcaat 1987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 2007 - 1926
Alignment:
Q  376 ttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcg 458  Q
    |||||| ||||| |||||||||| ||| |||||||||||||| ||  ||||||||||||| ||||||| ||||||||| ||||    
T  2007 ttttctttcaatttaaataagtggtttgcacatatatcaagtttttccttttgtgttttt-gtgatttcgtcgtctgaatgcg 1926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 367 - 541
Target Start/End: Original strand, 8403 - 8574
Alignment:
Q  367 ctttttctgttttctatcaatctaaataagtgatttccacatatatcaagtgttctcttttgtgtttttcgtgattttgtcgtctgagtgcgacgttgtg 466  Q
    |||||| | |||||| | || ||||||||||| |||  ||||||||| ||| ||  |||||||| |||| ||||||| ||| ||| |||||| ||||||     
T  8403 ctttttttcttttcttttaagctaaataagtggtttttacatatatccagtttttgcttttgtgatttttgtgatttcgtcatctaagtgcggcgttgta 8502  T
Q  467 ttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||| | || ||||||||  |   |||||| || ||||||||| ||| |||| |||| |||| ||||||||||||    
T  8503 ttgttcatcgtcttgtgcagc---gtttgatttcgcgtcttgtcgcgatgttcgtttagttcctattgaaagatc 8574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 541
Target Start/End: Original strand, 453936 - 454014
Alignment:
Q  463 tgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||||| |||| ||||| ||| |||||||||| |||  ||||||||||||||||  ||||  |||||||||||||||    
T  453936 tgtgttgttcgtcgtcttgggcggcgttgtttgattttcagtcttgttgcggtgttcatttgactcatattgaaagatc 454014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 344
Target Start/End: Complemental strand, 19343 - 19262
Alignment:
Q  263 ttttttagtgagagaaattccaacttcttttaagttttctttctcttttacttgttaaggaggggtggttttaggtcatttt 344  Q
    ||||||||||||||||| |||||||||| |  | |||||||||||||| |||  |  |||||||||||||||| ||| ||||    
T  19343 ttttttagtgagagaaactccaacttctctctaattttctttctctttcactcatcgaggaggggtggttttatgtcgtttt 19262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 559
Target Start/End: Complemental strand, 19124 - 19083
Alignment:
Q  518 ttgtttggttcatattgaaagatcagctttagtcaatcacag 559  Q
    ||||||||||||||||||||||| | ||| ||||||||||||    
T  19124 ttgtttggttcatattgaaagatgaacttcagtcaatcacag 19083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 461 - 540
Target Start/End: Complemental strand, 36762 - 36683
Alignment:
Q  461 gttgtgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagat 540  Q
    |||||||||| |||| |||||||||  ||||||||| ||    |||||||| |||| || ||||||||||||||||||||    
T  36762 gttgtgttgttcgtcgtcttgtgcggagttgtttgatttcttttcttgttgtggtgattatttggttcatattgaaagat 36683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 518
Target Start/End: Complemental strand, 20467 - 20414
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtt 518  Q
    |||||| |||| |||||||||||||||||||| ||| ||| || ||||||||||    
T  20467 tgttgttcgtcgtcttgtgcgacgttgtttgattttccgttttcttgcggtgtt 20414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 172678 - 172645
Alignment:
Q  45 ggataaaacacaatcttgccattgaacaagattt 78  Q
    |||||||| |||||||||||||||||||||||||    
T  172678 ggataaaatacaatcttgccattgaacaagattt 172645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 6311 - 6387
Alignment:
Q  465 tgttgtccgtcatcttgtgcgacgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatc 541  Q
    |||||| |||| |||||| || | |||||||| ||  |||||| ||||||||||  |||| ||||||||||||||||    
T  6311 tgttgttcgtcgtcttgtacggcattgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatc 6387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 504 - 556
Target Start/End: Original strand, 4193 - 4245
Alignment:
Q  504 tcttgttgcggtgtttgtttggttcatattgaaagatcagctttagtcaatca 556  Q
    |||||||||||||||  ||| || ||||||||||||||| ||||||| |||||    
T  4193 tcttgttgcggtgttcattttgtacatattgaaagatcaactttagttaatca 4245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 4134 - 4074
Alignment:
Q  486 acgttgtttgaatttgcgtcttgttgcggtgtttgtttggttcatattgaaagatcagctt 546  Q
    ||||||||||| || | ||||| ||| |||||| ||||| |||||||||||||| ||||||    
T  4134 acgttgtttgatttcgtgtcttattgtggtgttcgtttgattcatattgaaagaccagctt 4074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 701 times since January 2019
Visitors: 6130