View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0844_low_10 (Length: 499)

Name: NF0844_low_10
Description: NF0844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0844_low_10
NF0844_low_10
[»] chr1 (22 HSPs)
chr1 (27-384)||(26554426-26554793)
chr1 (383-491)||(48119626-48119734)
chr1 (379-491)||(35003288-35003400)
chr1 (380-491)||(44112672-44112783)
chr1 (383-491)||(38335916-38336024)
chr1 (385-491)||(38113189-38113295)
chr1 (385-491)||(46168383-46168489)
chr1 (385-491)||(41065153-41065259)
chr1 (385-491)||(45427739-45427845)
chr1 (385-491)||(45639726-45639832)
chr1 (385-491)||(45705825-45705931)
chr1 (385-491)||(26585462-26585568)
chr1 (381-491)||(35000107-35000217)
chr1 (385-442)||(14427347-14427404)
chr1 (384-484)||(43571087-43571187)
chr1 (385-484)||(37814778-37814877)
chr1 (385-484)||(5489776-5489875)
chr1 (387-471)||(2497576-2497660)
chr1 (385-484)||(23989524-23989624)
chr1 (385-484)||(48498963-48499062)
chr1 (387-484)||(7447828-7447924)
chr1 (385-484)||(750306-750405)
[»] chr4 (35 HSPs)
chr4 (377-491)||(17619146-17619260)
chr4 (384-491)||(55272370-55272477)
chr4 (385-491)||(32728357-32728463)
chr4 (385-491)||(711960-712066)
chr4 (385-491)||(46827700-46827806)
chr4 (387-491)||(38851515-38851619)
chr4 (387-490)||(3756242-3756344)
chr4 (385-491)||(48435573-48435679)
chr4 (387-491)||(35037007-35037111)
chr4 (380-491)||(960864-960975)
chr4 (385-465)||(49229684-49229764)
chr4 (385-484)||(28988473-28988572)
chr4 (418-491)||(19879987-19880060)
chr4 (385-484)||(41847971-41848070)
chr4 (385-484)||(23035980-23036079)
chr4 (385-484)||(33703141-33703240)
chr4 (385-471)||(1771280-1771366)
chr4 (385-471)||(27864564-27864650)
chr4 (385-471)||(28982836-28982922)
chr4 (385-471)||(55966360-55966446)
chr4 (387-484)||(27893843-27893940)
chr4 (387-484)||(41327544-41327641)
chr4 (382-484)||(27316714-27316816)
chr4 (386-484)||(41878407-41878505)
chr4 (385-470)||(25051693-25051778)
chr4 (427-491)||(36004110-36004174)
chr4 (385-484)||(27550309-27550408)
chr4 (382-484)||(35017730-35017831)
chr4 (385-479)||(48463456-48463550)
chr4 (383-484)||(45490314-45490415)
chr4 (381-421)||(36004168-36004208)
chr4 (387-471)||(43514700-43514784)
chr4 (384-470)||(12496955-12497041)
chr4 (387-484)||(43949802-43949900)
chr4 (271-300)||(1933743-1933772)
[»] chr8 (28 HSPs)
chr8 (385-491)||(34304788-34304894)
chr8 (385-491)||(35181516-35181622)
chr8 (385-491)||(16603620-16603726)
chr8 (387-491)||(33629987-33630091)
chr8 (386-491)||(16358827-16358933)
chr8 (385-491)||(18066712-18066818)
chr8 (385-491)||(19386559-19386670)
chr8 (384-484)||(1375541-1375641)
chr8 (427-491)||(10678146-10678210)
chr8 (381-484)||(11582762-11582865)
chr8 (383-484)||(29705360-29705461)
chr8 (385-484)||(36743484-36743583)
chr8 (387-484)||(29800951-29801048)
chr8 (387-484)||(42295197-42295294)
chr8 (387-484)||(26125637-26125734)
chr8 (387-471)||(20148762-20148846)
chr8 (387-471)||(30912576-30912660)
chr8 (387-471)||(42699259-42699343)
chr8 (385-484)||(5754903-5755002)
chr8 (385-484)||(30660743-30660842)
chr8 (393-484)||(31384672-31384763)
chr8 (385-484)||(42197436-42197535)
chr8 (386-471)||(45397317-45397402)
chr8 (385-484)||(40528635-40528735)
chr8 (385-484)||(2165964-2166063)
chr8 (385-484)||(2546996-2547095)
chr8 (384-424)||(9241563-9241603)
chr8 (385-421)||(10678204-10678240)
[»] chr2 (28 HSPs)
chr2 (385-491)||(966828-966934)
chr2 (385-491)||(43114557-43114663)
chr2 (381-491)||(12415454-12415564)
chr2 (381-491)||(12427514-12427624)
chr2 (385-491)||(18491705-18491811)
chr2 (387-491)||(11825648-11825752)
chr2 (387-491)||(41281968-41282072)
chr2 (385-491)||(16803968-16804074)
chr2 (385-491)||(16843250-16843356)
chr2 (387-491)||(4299414-4299518)
chr2 (385-491)||(34895735-34895841)
chr2 (387-470)||(6518484-6518566)
chr2 (401-491)||(4451944-4452034)
chr2 (405-491)||(12531657-12531742)
chr2 (386-484)||(34817777-34817875)
chr2 (385-491)||(14285676-14285782)
chr2 (383-484)||(1750412-1750513)
chr2 (385-484)||(4764727-4764826)
chr2 (385-484)||(30838632-30838731)
chr2 (385-484)||(43335764-43335863)
chr2 (383-484)||(13780736-13780837)
chr2 (383-484)||(16096745-16096846)
chr2 (385-484)||(12302254-12302353)
chr2 (386-484)||(19047158-19047256)
chr2 (385-481)||(42026767-42026865)
chr2 (387-484)||(43490402-43490499)
chr2 (387-470)||(8896598-8896681)
chr2 (382-471)||(7070413-7070502)
[»] chr7 (27 HSPs)
chr7 (384-491)||(31513286-31513393)
chr7 (385-491)||(40236919-40237025)
chr7 (386-491)||(31408627-31408732)
chr7 (385-491)||(27535225-27535331)
chr7 (385-491)||(33384870-33384977)
chr7 (387-484)||(10573751-10573848)
chr7 (382-484)||(24001013-24001115)
chr7 (387-484)||(4638200-4638297)
chr7 (387-484)||(43343625-43343722)
chr7 (387-484)||(44416935-44417032)
chr7 (384-484)||(42538432-42538532)
chr7 (385-484)||(24280597-24280696)
chr7 (385-471)||(42972852-42972938)
chr7 (385-470)||(5194246-5194331)
chr7 (385-484)||(35069721-35069820)
chr7 (385-471)||(9216302-9216387)
chr7 (384-442)||(39998407-39998465)
chr7 (379-484)||(5810925-5811030)
chr7 (385-470)||(43317443-43317528)
chr7 (387-471)||(44326180-44326264)
chr7 (385-484)||(5015395-5015494)
chr7 (388-471)||(26898416-26898499)
chr7 (415-484)||(32029818-32029887)
chr7 (385-442)||(41861674-41861731)
chr7 (401-484)||(38160580-38160663)
chr7 (383-470)||(45326018-45326105)
chr7 (387-484)||(16180358-16180454)
[»] chr5 (12 HSPs)
chr5 (385-491)||(17208074-17208180)
chr5 (385-491)||(30622713-30622818)
chr5 (384-491)||(32473388-32473495)
chr5 (385-484)||(7617133-7617232)
chr5 (382-484)||(2614650-2614752)
chr5 (380-470)||(38470574-38470664)
chr5 (383-484)||(22512303-22512404)
chr5 (385-484)||(33801469-33801568)
chr5 (385-484)||(41334664-41334763)
chr5 (387-484)||(5256997-5257094)
chr5 (380-484)||(18033977-18034081)
chr5 (385-457)||(33855071-33855143)
[»] chr3 (24 HSPs)
chr3 (385-491)||(9434124-9434230)
chr3 (385-491)||(10457886-10457992)
chr3 (379-491)||(51757587-51757699)
chr3 (385-491)||(25996268-25996374)
chr3 (385-491)||(4190259-4190365)
chr3 (385-490)||(52627972-52628077)
chr3 (383-491)||(34791827-34791935)
chr3 (382-471)||(42100685-42100774)
chr3 (383-471)||(45126942-45127030)
chr3 (380-484)||(40808860-40808964)
chr3 (385-484)||(46941053-46941152)
chr3 (379-485)||(53273684-53273790)
chr3 (386-484)||(54237097-54237195)
chr3 (384-484)||(36150129-36150229)
chr3 (385-484)||(24688403-24688502)
chr3 (385-484)||(25413681-25413780)
chr3 (150-258)||(41075636-41075746)
chr3 (385-484)||(54246149-54246248)
chr3 (386-484)||(40480750-40480848)
chr3 (386-484)||(42394420-42394518)
chr3 (387-484)||(27748565-27748662)
chr3 (427-484)||(51249350-51249407)
chr3 (387-484)||(53581859-53581956)
chr3 (385-484)||(47191027-47191125)
[»] chr6 (22 HSPs)
chr6 (385-491)||(33242403-33242509)
chr6 (387-491)||(27441544-27441648)
chr6 (382-485)||(33253910-33254013)
chr6 (385-484)||(3213400-3213499)
chr6 (383-484)||(13743222-13743323)
chr6 (383-484)||(13748722-13748823)
chr6 (385-491)||(31109216-31109322)
chr6 (385-470)||(7273350-7273435)
chr6 (387-471)||(24204001-24204085)
chr6 (385-484)||(9698334-9698433)
chr6 (385-484)||(26670010-26670109)
chr6 (150-258)||(31390301-31390411)
chr6 (385-471)||(7367549-7367635)
chr6 (384-484)||(30014342-30014442)
chr6 (385-484)||(21293678-21293777)
chr6 (385-484)||(26466799-26466898)
chr6 (385-484)||(7292747-7292846)
chr6 (385-484)||(21279929-21280028)
chr6 (387-470)||(30735984-30736067)
chr6 (271-300)||(12839252-12839281)
chr6 (271-300)||(25552812-25552841)
chr6 (271-300)||(25993978-25994007)
[»] scaffold0003 (1 HSPs)
scaffold0003 (387-491)||(45713-45817)
[»] scaffold0100 (1 HSPs)
scaffold0100 (384-491)||(35450-35557)
[»] scaffold0385 (1 HSPs)
scaffold0385 (385-484)||(11251-11350)
[»] scaffold0119 (1 HSPs)
scaffold0119 (385-484)||(685-784)
[»] scaffold0038 (1 HSPs)
scaffold0038 (386-484)||(112656-112754)
[»] scaffold0187 (2 HSPs)
scaffold0187 (385-484)||(14189-14288)
scaffold0187 (385-484)||(24517-24616)
[»] scaffold0157 (1 HSPs)
scaffold0157 (384-470)||(23436-23522)
[»] scaffold0006 (1 HSPs)
scaffold0006 (271-300)||(188215-188244)


Alignment Details
Target: chr1 (Bit Score: 256; Significance: 1e-142; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 27 - 384
Target Start/End: Original strand, 26554426 - 26554793
Alignment:
Q  27 ccacagactcactggcttgatggacaaccgtgtgtagatctgcctgatagacaaccacatgtagatctacccgttgatcctagtcttttctgacttcgat 126  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  26554426 ccacagactcaccggcctgatggacaaccgtgtgtagatctgcatgatagacaaccacatgtagatctacctgttgatcctagtcttt-ctgacttcgat 26554524  T
Q  127 tatacacctgaggaggacctgcatgatcttaatgtgcagatttttgttgatcgacatgaccgatatgtcatttgcacttttgctaatgcaagtgtttata 226  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26554525 tatacacctgagg---acctgcatgatcttaatgtgcagatttttgttgatcgacatgaccgatatgtcatttgcacttttgctaatgcgagtgtttata 26554621  T
Q  227 atgttggtcataatgtgttcatcctaatgtg-------------tcagtaagattttgggag--cacccaaggactgtttgtgtgtgctcaaacggtttt 311  Q
    || ||||||||||||||||||||||||||||             || |||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  26554622 atattggtcataatgtgttcatcctaatgtgtcggtaatgttgatccgtaagattttgggagcacacccaaggactgtttgtgtgtgctcaagcggtttt 26554721  T
Q  312 ttagtttactattatgggatgtgaatgggttcaaggtgtccagtgtttttaggcacctttgtatctcttttat 384  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26554722 ttagtttactattatgggatgtgaatgggttcaaggtgtcc-gtgtttttaggcacctttgtatctcttttat 26554793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 383 - 491
Target Start/End: Original strand, 48119626 - 48119734
Alignment:
Q  383 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 482  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  48119626 atggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctc 48119725  T
Q  483 tttcatctc 491  Q
    |||||||||    
T  48119726 tttcatctc 48119734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 379 - 491
Target Start/End: Original strand, 35003288 - 35003400
Alignment:
Q  379 ttttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactt 478  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||| ||||||    
T  35003288 ttttttggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcacaaccatactt 35003387  T
Q  479 tctctttcatctc 491  Q
    |||||||||||||    
T  35003388 tctctttcatctc 35003400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 380 - 491
Target Start/End: Original strand, 44112672 - 44112783
Alignment:
Q  380 tttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatacttt 479  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| |||||||    
T  44112672 tttaaggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatacttt 44112771  T
Q  480 ctctttcatctc 491  Q
    ||||||||||||    
T  44112772 ctctttcatctc 44112783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 383 - 491
Target Start/End: Original strand, 38335916 - 38336024
Alignment:
Q  383 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 482  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  38335916 atggaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcacaaccatactttctc 38336015  T
Q  483 tttcatctc 491  Q
    |||||||||    
T  38336016 tttcatctc 38336024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 38113295 - 38113189
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||| |||||    
T  38113295 ggaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcacaaccatacttactctt 38113196  T
Q  485 tcatctc 491  Q
    |||||||    
T  38113195 tcatctc 38113189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 46168383 - 46168489
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||||||||| | |||||||||||||| ||||||||||||  ||||||||||||||||||||||| ||||||||||||    
T  46168383 ggaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 46168482  T
Q  485 tcatctc 491  Q
    |||||||    
T  46168483 tcatctc 46168489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 41065153 - 41065259
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || | ||||||||| ||||||||||||| ||||||||||||    
T  41065153 ggaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcacaaccatactttctctt 41065252  T
Q  485 tcatctc 491  Q
    || ||||    
T  41065253 tcctctc 41065259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 45427845 - 45427739
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||| |||| ||||||||| ||||||||||||| ||||||||||||    
T  45427845 ggaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 45427746  T
Q  485 tcatctc 491  Q
    |||||||    
T  45427745 tcatctc 45427739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 45639832 - 45639726
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||||||||  ||||||||||||    
T  45639832 ggaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcacaatcatactttctctt 45639733  T
Q  485 tcatctc 491  Q
    |||||||    
T  45639732 tcatctc 45639726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 45705825 - 45705931
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||| ||||||| ||||||||||||||  ||||||||||| |||||||||| |||| ||||| ||||||||||||||||| ||||||||||||    
T  45705825 ggaaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctt 45705924  T
Q  485 tcatctc 491  Q
    |||||||    
T  45705925 tcatctc 45705931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 26585462 - 26585568
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||||  |||| ||||||||||||| |||  ||||||||||||    
T  26585462 ggaaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattttagtaaattcatctcgcaatcatactttctctt 26585561  T
Q  485 tcatctc 491  Q
    |||||||    
T  26585562 tcatctc 26585568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 381 - 491
Target Start/End: Complemental strand, 35000217 - 35000107
Alignment:
Q  381 ttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttc 480  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||| ||  |||| |||| |||| ||||| |||||| |||||||||| ||||||||    
T  35000217 ttatggaaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttgataaatttatctcacaaccatactttc 35000118  T
Q  481 tctttcatctc 491  Q
    |||||||||||    
T  35000117 tctttcatctc 35000107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 442
Target Start/End: Original strand, 14427347 - 14427404
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcatta 442  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  14427347 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcatta 14427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 384 - 484
Target Start/End: Complemental strand, 43571187 - 43571087
Alignment:
Q  384 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 483  Q
    |||||||||||||||||||| |||||| || ||||||  ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| |||    
T  43571187 tggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 43571088  T
Q  484 t 484  Q
    |    
T  43571087 t 43571087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 37814778 - 37814877
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||| |||| |||||| ||||||| |  ||||||||||||||| ||||||||  ||||||||||||||| ||||||| | ||||| ||||    
T  37814778 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 37814877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 5489776 - 5489875
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  5489776 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 5489875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 471
Target Start/End: Complemental strand, 2497660 - 2497576
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    |||||||||||| |||| | |||| |||||||  | ||||||||||||||  ||||||||  ||||||||| |||||||||||||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcacaac 2497576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 23989624 - 23989524
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaat-catacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 483  Q
    ||||||||||||||||||| ||||| || ||||||| | |||||| |||| ||| |||| |||  |||||||||||| |||||||||| | ||||| |||    
T  23989624 ggaaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctcacaaccacactttatct 23989525  T
Q  484 t 484  Q
    |    
T  23989524 t 23989524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 48499062 - 48498963
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||||  ||||| |  ||||| | |||||||||| |||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  48499062 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 48498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 484
Target Start/End: Original strand, 7447828 - 7447924
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||||||||| || |||| || |||||||| |||||| ||||  ||  ||||| ||| ||||||||||||| | ||||| ||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtaca-cccatgtattacagatattttgataagttcatctcacaaccacactttatctt 7447924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 750405 - 750306
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||| |||||| ||||   || ||||||| ||||||||||||||| || | |||  ||||| ||||||||||||| ||| | ||||| ||||    
T  750405 ggaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctcaaaaccacactttatctt 750306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 3e-46; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 377 - 491
Target Start/End: Complemental strand, 17619260 - 17619146
Alignment:
Q  377 tcttttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatac 476  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  17619260 tcttttatggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatac 17619161  T
Q  477 tttctctttcatctc 491  Q
    |||||||||||||||    
T  17619160 tttctctttcatctc 17619146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 384 - 491
Target Start/End: Complemental strand, 55272477 - 55272370
Alignment:
Q  384 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 483  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  55272477 tggaaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctct 55272378  T
Q  484 ttcatctc 491  Q
    ||||||||    
T  55272377 ttcatctc 55272370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 32728357 - 32728463
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||  ||||||||||||    
T  32728357 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcacaatcatactttctctt 32728456  T
Q  485 tcatctc 491  Q
    |||||||    
T  32728457 tcatctc 32728463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 711960 - 712066
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||  ||||||||||||    
T  711960 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcacaaacatactttctctt 712059  T
Q  485 tcatctc 491  Q
    |||||||    
T  712060 tcatctc 712066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 46827806 - 46827700
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||| |||||||||  ||| ||||||||    
T  46827806 ggaaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcattaagaacgttttggtaaatttatctcacaaacatattttctctt 46827707  T
Q  485 tcatctc 491  Q
    |||||||    
T  46827706 tcatctc 46827700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 387 - 491
Target Start/End: Original strand, 38851515 - 38851619
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 486  Q
    ||||||||||||||| |||||||||||||||| | || ||||||| |||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||    
T  38851515 aaaatgttacatgaatatcctttaatcatacatcataatgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctttc 38851614  T
Q  487 atctc 491  Q
    |||||    
T  38851615 atctc 38851619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 387 - 490
Target Start/End: Complemental strand, 3756344 - 3756242
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 486  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| ||||||| |||||||||  ||||||| ||||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcacaatcatacttt-tctttc 3756246  T
Q  487 atct 490  Q
    ||||    
T  3756245 atct 3756242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 48435679 - 48435573
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||| ||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||  ||||||| ||||    
T  48435679 ggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctt 48435580  T
Q  485 tcatctc 491  Q
    |||||||    
T  48435579 tcatctc 48435573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 387 - 491
Target Start/End: Original strand, 35037007 - 35037111
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 486  Q
    |||||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||| ||| ||||||    
T  35037007 aaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatattttttctttc 35037106  T
Q  487 atctc 491  Q
     ||||    
T  35037107 ttctc 35037111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 380 - 491
Target Start/End: Complemental strand, 960975 - 960864
Alignment:
Q  380 tttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatacttt 479  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||| || ||||| |||| ||||||||||||||||| | ||   ||||||    
T  960975 tttaaggaaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatcttataatcgtacttt 960876  T
Q  480 ctctttcatctc 491  Q
    ||||||||||||    
T  960875 ctctttcatctc 960864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 385 - 465
Target Start/End: Complemental strand, 49229764 - 49229684
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatct 465  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||  || ||||||||||||||    
T  49229764 ggaaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 28988473 - 28988572
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| |||||||||  ||||||||||||||||| || |||| ||||| ||||||||||||| ||| | ||||||||||    
T  28988473 ggaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctcataaccacactttctctt 28988572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 418 - 491
Target Start/End: Original strand, 19879987 - 19880060
Alignment:
Q  418 accctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttcatctc 491  Q
    |||||||||||||||||||  |||| |||| ||||||||||||||||||||||  |||||||||||||||||||    
T  19879987 accctattgtacaccccatatattatggacattttggtaaattcatctcacaatcatactttctctttcatctc 19880060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 41847971 - 41848070
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||| |||||||||||  ||| |||||  ||||||||||||||||||||  ||| |||||| ||||||||| |||||| | ||||||||||    
T  41847971 ggaaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacattttggcaaattcatcgcacaaccacactttctctt 41848070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 23035980 - 23036079
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||||| ||  |||| |||  |||| |||| ||||||||||||| | ||||| ||||    
T  23035980 ggaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatctt 23036079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 33703141 - 33703240
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| |  |||| | |||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  33703141 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 33703240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 471
Target Start/End: Complemental strand, 1771366 - 1771280
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    ||||||||||||||||||| |||||| || ||||||| ||||||||||||||| ||||  ||  ||||| ||| |||||||||||||    
T  1771366 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcacaac 1771280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 471
Target Start/End: Original strand, 27864564 - 27864650
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    |||||||||||||| |||| | |||| ||||||| || ||||||||||||||| |||| |||  ||||||||| |||||||||||||    
T  27864564 ggaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaac 27864650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 471
Target Start/End: Complemental strand, 28982922 - 28982836
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    ||||||||||||||||||| |||||| |  |||||||||||||||| |||||  |||| |||  ||||||||| |||||||||||||    
T  28982922 ggaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcacaac 28982836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 471
Target Start/End: Complemental strand, 55966446 - 55966360
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    |||||||||||||| |||| |||||| ||||||| || |||||||| |||||| |||| |||  ||||||||| |||||||||||||    
T  55966446 ggaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcacaac 55966360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 484
Target Start/End: Complemental strand, 27893940 - 27893843
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||| |||| | |||| ||||||| || ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatctt 27893843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 484
Target Start/End: Complemental strand, 41327641 - 41327544
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||  ||| |||||| ||| |||||| ||||||||||  ||||| || |||| ||||||||||||||||||||| | | ||||||||||    
T  41327641 aaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatctcacatccacactttctctt 41327544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 484
Target Start/End: Complemental strand, 27316816 - 27316714
Alignment:
Q  382 tatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttct 481  Q
    |||||||||||||| | ||||| |||||| || ||||||  ||| ||||||||||| ||||||||  ||||||||| ||||||||| ||| | ||||| |    
T  27316816 tatggaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctcataaccacactttat 27316717  T
Q  482 ctt 484  Q
    |||    
T  27316716 ctt 27316714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 386 - 484
Target Start/End: Original strand, 41878407 - 41878505
Alignment:
Q  386 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||  ||||| |||||||||  ||||||||||| || ||||| |||  ||||| ||| ||||||||||||| | || |||||||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcacaaccaaaccttctctt 41878505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 470
Target Start/End: Original strand, 25051693 - 25051778
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 470  Q
    ||||||||| |||||||||  ||||| || ||||||| ||||||||||| ||| |||| |||  ||||||||| ||||||||||||    
T  25051693 ggaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcacaa 25051778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 427 - 491
Target Start/End: Complemental strand, 36004174 - 36004110
Alignment:
Q  427 tacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttcatctc 491  Q
    ||||||||||  |||| |||| ||||| |||||| |||||||||| |||||||||||||||||||    
T  36004174 tacaccccatatattagggacattttgataaatttatctcacaaccatactttctctttcatctc 36004110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 27550309 - 27550408
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| |  ||||| | |||||||||| |||| |||| |||  ||||||||| ||||||| ||||| | ||||| ||||    
T  27550309 ggaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatcttacaaccacactttatctt 27550408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 484
Target Start/End: Original strand, 35017730 - 35017831
Alignment:
Q  382 tatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttct 481  Q
    |||||||||||||||||||||| |||||| || || | |  ||||||||||||||| | || |||  ||||||||| ||||||||||||| | ||||| |    
T  35017730 tatggaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatattttggtaagttcatctcacaaccacactttat 35017828  T
Q  482 ctt 484  Q
    |||    
T  35017829 ctt 35017831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 479
Target Start/End: Complemental strand, 48463550 - 48463456
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatacttt 479  Q
    |||||||||||||| |||| | |||| |||||||    |||||||| |||||| |||| |||  ||||||||| ||||||||||||| |||||||    
T  48463550 ggaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatacttt 48463456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 484
Target Start/End: Complemental strand, 45490415 - 45490314
Alignment:
Q  383 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 482  Q
    |||||||||||||||||||||   |||| | ||||| || |||||||||| |||| |||| |||   ||| |||||||||||||||||| | ||||| ||    
T  45490415 atggaaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcacaaccacactttatc 45490316  T
Q  483 tt 484  Q
    ||    
T  45490315 tt 45490314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 421
Target Start/End: Complemental strand, 36004208 - 36004168
Alignment:
Q  381 ttatggaaaatgttacatgaacatcctttaatcatacaccc 421  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  36004208 ttatggaaaatgttacatgaataccctttaatcatacaccc 36004168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 471
Target Start/End: Complemental strand, 43514784 - 43514700
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    ||||||||||||||||| |||||| || ||||| | |||||||||  |||| |||| ||   ||||||||| |||||||||||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcacaac 43514700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 470
Target Start/End: Original strand, 12496955 - 12497041
Alignment:
Q  384 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 470  Q
    |||||||||||| ||||||| |||||| || ||||| | |||||||| |||||| ||||  ||  ||||||||| ||||||| ||||    
T  12496955 tggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaa 12497041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 484
Target Start/End: Complemental strand, 43949900 - 43949802
Alignment:
Q  387 aaaatgttacatgaacatcctttaat-catacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||| |||||||||| ||||| || | | ||||  ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  43949900 aaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 43949802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 300
Target Start/End: Complemental strand, 1933772 - 1933743
Alignment:
Q  271 gggagcacccaaggactgtttgtgtgtgct 300  Q
    ||||||||||||||||||||||||||||||    
T  1933772 gggagcacccaaggactgtttgtgtgtgct 1933743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 7e-44; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 34304788 - 34304894
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||    
T  34304788 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 34304887  T
Q  485 tcatctc 491  Q
    |||||||    
T  34304888 tcatctc 34304894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 35181516 - 35181622
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||    
T  35181516 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 35181615  T
Q  485 tcatctc 491  Q
    |||||||    
T  35181616 tcatctc 35181622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 16603726 - 16603620
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||| ||| |||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||||||||||||| |||||| |||||    
T  16603726 ggaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcacaaccatacttactctt 16603627  T
Q  485 tcatctc 491  Q
    |||||||    
T  16603626 tcatctc 16603620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 387 - 491
Target Start/End: Complemental strand, 33630091 - 33629987
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 486  Q
    ||||||||||| ||||| ||||||||||||||||  ||||||||||| |||||||| |||| |||| |||| ||||||||||||||||||||||||||||    
T  33630091 aaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcacaactatactttctctttc 33629992  T
Q  487 atctc 491  Q
    |||||    
T  33629991 atctc 33629987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 386 - 491
Target Start/End: Complemental strand, 16358933 - 16358827
Alignment:
Q  386 gaaaatgttacat-gaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||| ||||||||||||| |  ||||| ||||||||||||||||| ||||||||| ||    
T  16358933 gaaaatgttacattgaagaccctttaatcatacaccctattgtacatcccatgcattaagaatattttgataaattcatctcacaaccatactttctttt 16358834  T
Q  485 tcatctc 491  Q
    |||||||    
T  16358833 tcatctc 16358827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 18066818 - 18066712
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||| |||||| |||| |||  |||| |||| ||||||||||||| ||||||||||||    
T  18066818 ggaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcacaaccatactttctctt 18066719  T
Q  485 tcatctc 491  Q
    |||||||    
T  18066718 tcatctc 18066712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 19386670 - 19386559
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccc-----catgcattaaggacgttttggtaaattcatctcacaactatacttt 479  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||   |     ||||||||||| | |||||| |||||||||||||||||||||||||    
T  19386670 ggaaaatgttacatgaacaccctttaatcatacaccctattatactttctctttcatgcattaagaatgttttgataaattcatctcacaactatacttt 19386571  T
Q  480 ctctttcatctc 491  Q
    ||||||||||||    
T  19386570 ctctttcatctc 19386559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 384 - 484
Target Start/End: Original strand, 1375541 - 1375641
Alignment:
Q  384 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 483  Q
    |||||||| ||||||||||| | |||| |||||||||| ||||||||||||||  |||| |||  |||||||||||| |||||||||||| ||||| |||    
T  1375541 tggaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcacaactacactttatct 1375640  T
Q  484 t 484  Q
    |    
T  1375641 t 1375641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 427 - 491
Target Start/End: Complemental strand, 10678210 - 10678146
Alignment:
Q  427 tacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttcatctc 491  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  10678210 tacaccccatatattaaggacattttggtaaattcatctcacaaccatactttctctttcatctc 10678146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 381 - 484
Target Start/End: Original strand, 11582762 - 11582865
Alignment:
Q  381 ttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttc 480  Q
    ||||||||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | |||||     
T  11582762 ttatggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacacttta 11582861  T
Q  481 tctt 484  Q
    ||||    
T  11582862 tctt 11582865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 484
Target Start/End: Original strand, 29705360 - 29705461
Alignment:
Q  383 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 482  Q
    ||||||||||||||||||||| |||||| |  ||||||| ||||||||||||||| |||| |||  ||||| ||| ||||||||||||| | ||||| ||    
T  29705360 atggaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatc 29705459  T
Q  483 tt 484  Q
    ||    
T  29705460 tt 29705461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 36743583 - 36743484
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  36743583 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 36743484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 484
Target Start/End: Complemental strand, 29801048 - 29800951
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||| |||| | |||| ||||||| || ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  29801048 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 29800951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 484
Target Start/End: Original strand, 42295197 - 42295294
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||| |||||| || ||||||  ||||||||| ||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42295294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 484
Target Start/End: Original strand, 26125637 - 26125734
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||| |||| |||||| |||||||  | ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 26125734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 471
Target Start/End: Original strand, 20148762 - 20148846
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    |||||||||||| |||| |||||| ||||||| || |||||||||| |||  |||| |||  ||||||||| |||||||||||||    
T  20148762 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaac 20148846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 471
Target Start/End: Complemental strand, 30912660 - 30912576
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    ||||||||||||||||| |||||| || ||||||| |||||||||  |||| |||| ||   ||||||||| |||||||||||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcacaac 30912576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 471
Target Start/End: Original strand, 42699259 - 42699343
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    ||||||||||||||||| |||||| || ||||||| ||||||||||  ||| |||| |||  |||| |||| |||||||||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcacaac 42699343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 5754903 - 5755002
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| | |||| || |||| || |||||||| |||||  |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  5754903 ggaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcacaaccacactttatctt 5755002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 30660842 - 30660743
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| |  |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||| ||||| | ||||| ||||    
T  30660842 ggaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatcttacaaccacactttatctt 30660743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 31384672 - 31384763
Alignment:
Q  393 ttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||| |||||| || ||||  ||||||||||||||||| |||| | |  ||||||||| ||||||||||||| | ||||| ||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcacaaccacactttatctt 31384763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 42197535 - 42197436
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| | |||| || ||||||| |||| |||| | ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  42197535 ggaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42197436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 471
Target Start/End: Original strand, 45397317 - 45397402
Alignment:
Q  386 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    ||||||||||| |||||| |||||| || ||||||| ||| ||||||| ||| |||| |||  |||| |||| |||||||||||||    
T  45397317 gaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcacaac 45397402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 40528735 - 40528635
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaat-catacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 483  Q
    |||||||  |||||||||| ||||| || || | |||| ||||||||||||||  |||| |||| ||||| |||||| |||||||||| | |||||||||    
T  40528735 ggaaaataatacatgaacacccttttattcacaaaccccattgtacaccccatatattagggacattttgataaatttatctcacaaccacactttctct 40528636  T
Q  484 t 484  Q
    |    
T  40528635 t 40528635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 2166063 - 2165964
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||| ||||||||||| | |||| || ||||||| |||||| |||||||| ||||  ||  ||||||||| ||||||||| ||| | ||||| ||||    
T  2166063 ggaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctcataaccacactttatctt 2165964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 2546996 - 2547095
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||||  ||||| |  ||||| | |||||||||| |||| |||| |||  |||| |||| ||||||||||||| | ||||| ||||    
T  2546996 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcacaaccacactttatctt 2547095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 424
Target Start/End: Original strand, 9241563 - 9241603
Alignment:
Q  384 tggaaaatgttacatgaacatcctttaatcatacaccctat 424  Q
    ||||||||||||||||||| ||||||| || ||||||||||    
T  9241563 tggaaaatgttacatgaacctcctttattcctacaccctat 9241603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 10678240 - 10678204
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccc 421  Q
    ||||||||||||||||| | |||||||||||||||||    
T  10678240 ggaaaatgttacatgaataccctttaatcatacaccc 10678204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 7e-44; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 966934 - 966828
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||    
T  966934 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcacaaacatactttctctt 966835  T
Q  485 tcatctc 491  Q
    |||||||    
T  966834 tcatctc 966828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 43114557 - 43114663
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||    
T  43114557 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 43114656  T
Q  485 tcatctc 491  Q
    |||||||    
T  43114657 tcatctc 43114663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 381 - 491
Target Start/End: Complemental strand, 12415564 - 12415454
Alignment:
Q  381 ttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttc 480  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||| ||||||||| || |||||||||| ||||||||    
T  12415564 ttatggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttc 12415465  T
Q  481 tctttcatctc 491  Q
    |||||||||||    
T  12415464 tctttcatctc 12415454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 381 - 491
Target Start/End: Complemental strand, 12427624 - 12427514
Alignment:
Q  381 ttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttc 480  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||| ||||||||| || |||||||||| ||||||||    
T  12427624 ttatggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttc 12427525  T
Q  481 tctttcatctc 491  Q
    |||||||||||    
T  12427524 tctttcatctc 12427514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 18491705 - 18491811
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| |||||| |||||    
T  18491705 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcacaaccatacttactctt 18491804  T
Q  485 tcatctc 491  Q
    |||||||    
T  18491805 tcatctc 18491811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 387 - 491
Target Start/End: Complemental strand, 11825752 - 11825648
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 486  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||  ||||||||||||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaatcatactttctctttc 11825653  T
Q  487 atctc 491  Q
    |||||    
T  11825652 atctc 11825648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 387 - 491
Target Start/End: Complemental strand, 41282072 - 41281968
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 486  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||| ||||||||||||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcacaaccatactttctctttc 41281973  T
Q  487 atctc 491  Q
    |||||    
T  41281972 atctc 41281968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 16803968 - 16804074
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| ||||| ||| ||||||||||||| ||||||||||||    
T  16803968 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctt 16804067  T
Q  485 tcatctc 491  Q
    |||||||    
T  16804068 tcatctc 16804074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 16843250 - 16843356
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| ||||| ||| ||||||||||||| ||||||||||||    
T  16843250 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctt 16843349  T
Q  485 tcatctc 491  Q
    |||||||    
T  16843350 tcatctc 16843356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 387 - 491
Target Start/End: Complemental strand, 4299518 - 4299414
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 486  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||  |||||| ||||||     
T  4299518 aaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcacaatcatacttactcttta 4299419  T
Q  487 atctc 491  Q
    |||||    
T  4299418 atctc 4299414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 34895841 - 34895735
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||| ||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||  ||||||| ||||    
T  34895841 ggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctt 34895742  T
Q  485 tcatctc 491  Q
    |||||||    
T  34895741 tcatctc 34895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 6518566 - 6518484
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 470  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  6518566 aaaatgttacatgaaca-cctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaa 6518484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 401 - 491
Target Start/End: Complemental strand, 4452034 - 4451944
Alignment:
Q  401 acatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttcatctc 491  Q
    ||||||| |||||||||| | |||||||||||  |||||||| |||  ||||||||||||||||||||||| |||||||||||||||||||    
T  4452034 acatcctataatcatacatcttattgtacaccatatgcattagggatattttggtaaattcatctcacaaccatactttctctttcatctc 4451944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 405 - 491
Target Start/End: Complemental strand, 12531742 - 12531657
Alignment:
Q  405 cctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttcatctc 491  Q
    ||||||||||||||||| |||||||||| || |||||| || | ||||||||||||||||||||||| |||||||||||||||||||    
T  12531742 cctttaatcatacacccaattgtacacctcaagcattatgggc-ttttggtaaattcatctcacaaccatactttctctttcatctc 12531657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 386 - 484
Target Start/End: Complemental strand, 34817875 - 34817777
Alignment:
Q  386 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||| |||||| ||| |||||  ||||||||||||||||| || | || ||||||||||||||||||||||| | ||||||||||    
T  34817875 gaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctcacaaccacactttctctt 34817777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 14285676 - 14285782
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||| |||||  |||| ||||||||||||||||||||||||||||| ||  ||||| ||  ||||||||||||||||||| |   ||||||||||||    
T  14285676 ggaaaatattacacaaacaccctttaatcatacaccctattgtacaccctatatattaaagatattttggtaaattcatctcagagtcatactttctctt 14285775  T
Q  485 tcatctc 491  Q
    |||||||    
T  14285776 tcatctc 14285782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 484
Target Start/End: Original strand, 1750412 - 1750513
Alignment:
Q  383 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 482  Q
    ||||||||||||||||||||| |||||| || ||||||| ||||||||||| ||| |||| |||  |||| |||| ||||||||||||| | ||||| ||    
T  1750412 atggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatc 1750511  T
Q  483 tt 484  Q
    ||    
T  1750512 tt 1750513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 4764826 - 4764727
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||| |||| | |||| || ||||||||||||||||||||||| ||||   |  ||||||||||||||||||||||| | ||||| ||||    
T  4764826 ggaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcacaaccacactttatctt 4764727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 30838632 - 30838731
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| |  |||| | |||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  30838632 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 30838731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 43335863 - 43335764
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||| ||||||||| |||| || ||||||  |||||||| |||||| |||| |||  ||||||||| ||||||||||||||| ||||| ||||    
T  43335863 ggaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaactacactttatctt 43335764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 484
Target Start/End: Complemental strand, 13780837 - 13780736
Alignment:
Q  383 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 482  Q
    |||||||||||||||| ||||   |||| ||| |||||  |||||||||||||| ||||| |||  ||||| ||||||||||||||||| | ||||||||    
T  13780837 atggaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctcacaaccacactttctc 13780738  T
Q  483 tt 484  Q
    ||    
T  13780737 tt 13780736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 484
Target Start/End: Original strand, 16096745 - 16096846
Alignment:
Q  383 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 482  Q
    ||||||||||||||||||||| |||||| || ||||||| ||| ||||||||||| |||| |||  ||||||| | || |||||||||| | ||||| ||    
T  16096745 atggaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcacaaccacactttatc 16096844  T
Q  483 tt 484  Q
    ||    
T  16096845 tt 16096846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 12302353 - 12302254
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| |  ||||||| ||||||||||| ||| |||| |||  |||| |||| ||||||||||||| | ||||| ||||    
T  12302353 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 12302254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 386 - 484
Target Start/End: Original strand, 19047158 - 19047256
Alignment:
Q  386 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||| |||||| || ||||  | ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  19047158 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 19047256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 481
Target Start/End: Original strand, 42026767 - 42026865
Alignment:
Q  385 ggaaaatgttacatgaacatcc--tttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttct 481  Q
    ||||||||||||||||||| ||  |||| |||||||  | |||||||| |||  |||||| |||  |||||| |||||||||||||||||| |||||||    
T  42026767 ggaaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttggcaaattcatctcacaactacactttct 42026865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 484
Target Start/End: Complemental strand, 43490499 - 43490402
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||| |||||| || |||| || ||||||||| | ||| |||| |||  ||||||||| ||||||||| ||| | ||||| ||||    
T  43490499 aaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctcataaccacactttatctt 43490402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 8896681 - 8896598
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 470  Q
    ||||||||||||||||| |||||| ||| |||  | ||||||||||| || || || | |  ||||||||||||||||||||||    
T  8896681 aaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcacaa 8896598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 471
Target Start/End: Original strand, 7070413 - 7070502
Alignment:
Q  382 tatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    |||| ||||||||||||||||| |||||| ||||||| || ||||||  | ||||  |||  |||| ||||| ||||||||||| |||||    
T  7070413 tatgaaaaatgttacatgaacaccctttattcatacatcccattgtaacctccatttattggggacattttgataaattcatcttacaac 7070502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 384 - 491
Target Start/End: Original strand, 31513286 - 31513393
Alignment:
Q  384 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 483  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  31513286 tggaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcacaaccatactttctct 31513385  T
Q  484 ttcatctc 491  Q
    ||||||||    
T  31513386 ttcatctc 31513393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 40236919 - 40237025
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||| ||||||||    
T  40236919 ggaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatattttctctt 40237018  T
Q  485 tcatctc 491  Q
    |||||||    
T  40237019 tcatctc 40237025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 386 - 491
Target Start/End: Complemental strand, 31408732 - 31408627
Alignment:
Q  386 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctcttt 485  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||  ||||||||||||||| ||||||| |||||||||||||    
T  31408732 gaaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcacaaccatactttctcttt 31408633  T
Q  486 catctc 491  Q
    ||||||    
T  31408632 catctc 31408627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 27535331 - 27535225
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| |||||  |||| ||| ||||||||| ||||||||||||||||||||||||||    
T  27535331 ggaaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcacaactatactttctctt 27535232  T
Q  485 tcatctc 491  Q
    |||||||    
T  27535231 tcatctc 27535225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 33384870 - 33384977
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccc-tattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 483  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||| || |||||||||| |||| ||||||||||||||||||||||  |||||||||||    
T  33384870 ggaaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcacaaacatactttctct 33384969  T
Q  484 ttcatctc 491  Q
    ||||||||    
T  33384970 ttcatctc 33384977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 484
Target Start/End: Original strand, 10573751 - 10573848
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||| |||| |||||| ||||||| |||||||||||||||||| |||| | |  ||||||||||||||||||||||| | ||||| ||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcacaaccacactttatctt 10573848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 484
Target Start/End: Complemental strand, 24001115 - 24001013
Alignment:
Q  382 tatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttct 481  Q
    |||||||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| |    
T  24001115 tatggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 24001016  T
Q  482 ctt 484  Q
    |||    
T  24001015 ctt 24001013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 484
Target Start/End: Complemental strand, 4638297 - 4638200
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||| | |||| |||||||| | ||||||||||||||  |||| |||  ||||||||| ||||||||||||| ||||||| ||||    
T  4638297 aaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcacaaccatactttatctt 4638200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 484
Target Start/End: Complemental strand, 43343722 - 43343625
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||| |  ||||||||||||||||||||||| |||| |||  ||||| ||| ||||||||||||| | ||||| ||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 43343625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 484
Target Start/End: Complemental strand, 44417032 - 44416935
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||| |  ||||||||||||||||||||||| |||| |||  ||||| ||| ||||||||||||| | ||||| ||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 44416935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 384 - 484
Target Start/End: Complemental strand, 42538532 - 42538432
Alignment:
Q  384 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 483  Q
    |||||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| |||    
T  42538532 tggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatct 42538433  T
Q  484 t 484  Q
    |    
T  42538432 t 42538432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 24280696 - 24280597
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||| |||||| |||||| |||||||||||||| |||| |||||||| ||   |  ||||||||||||||||||||||  | ||||||||||    
T  24280696 ggaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcacaatcacactttctctt 24280597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 471
Target Start/End: Original strand, 42972852 - 42972938
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    |||||||||||| ||||||||||||| || ||||| | |||||||||| |||| |||| |||  ||||||||| |||||||||||||    
T  42972852 ggaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaac 42972938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 470
Target Start/End: Complemental strand, 5194331 - 5194246
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 470  Q
    ||||||||||||||||||| | |||| |||||||||  ||||||||||| |||  |||||||  ||||| ||||||||||||||||    
T  5194331 ggaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcacaa 5194246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 35069721 - 35069820
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||||  ||||| || ||||||  |||||||||| |||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  35069721 ggaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 35069820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 385 - 471
Target Start/End: Original strand, 9216302 - 9216387
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    ||||||||||||||||||| |||||| || || | ||||||||||| |||||||||||  ||  ||||||||| |||||||||||||    
T  9216302 ggaaaatgttacatgaacaccctttattcctatatcctattgtaca-cccatgcattagagatattttggtaagttcatctcacaac 9216387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 384 - 442
Target Start/End: Original strand, 39998407 - 39998465
Alignment:
Q  384 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcatta 442  Q
    ||||||||||||||||||||   |||||||||||| |||||||||||||||||| ||||    
T  39998407 tggaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtatta 39998465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 484
Target Start/End: Complemental strand, 5811030 - 5810925
Alignment:
Q  379 ttttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactt 478  Q
    |||| ||||||||||||||||| || |||||| || ||||||| ||||||||||| ||  |||| |||  ||||| ||| ||||||||||||| | ||||    
T  5811030 ttttttggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcacaaccacactt 5810931  T
Q  479 tctctt 484  Q
    | ||||    
T  5810930 tatctt 5810925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 470
Target Start/End: Original strand, 43317443 - 43317528
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 470  Q
    ||||||||||||||||||| | |||| |||||||||  |||||||| || |||| ||| |||  ||||| ||||||||||||||||    
T  43317443 ggaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcacaa 43317528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 471
Target Start/End: Original strand, 44326180 - 44326264
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    |||||||||||| |||| |||||| ||||||| || |||||||||| |||  |||| |||  ||||||||| |||||||||||||    
T  44326180 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaac 44326264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 5015395 - 5015494
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||||  ||||| |  ||||| | |||||||||| |||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  5015395 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 5015494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 471
Target Start/End: Complemental strand, 26898499 - 26898416
Alignment:
Q  388 aaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    |||||||||||||||| | |||| |||||||||| ||||||||  ||||| |||| |||  ||||||||| ||||||| |||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatcttacaac 26898416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 32029887 - 32029818
Alignment:
Q  415 tacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||| ||||||||||||||| |||| |||  ||||||||||||||||| ||||| | ||||| ||||    
T  32029887 tacaccccattgtacaccccatgtattagggatattttggtaaattcatctaacaaccacactttatctt 32029818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 442
Target Start/End: Original strand, 41861674 - 41861731
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcatta 442  Q
    ||||||||||||||||||| |||||| |||||||||| ||| ||||||| ||| ||||    
T  41861674 ggaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtatta 41861731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 484
Target Start/End: Complemental strand, 38160663 - 38160580
Alignment:
Q  401 acatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||| ||| || ||||| | ||||||||||||||| |||| |||  |||| |||| ||||||||||||||| ||||| ||||    
T  38160663 acatcccttattcttacactccattgtacaccccatgtattagggatattttagtaacttcatctcacaactacactttatctt 38160580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 470
Target Start/End: Original strand, 45326018 - 45326105
Alignment:
Q  383 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 470  Q
    ||||||| |||||||| |||| | |||| ||||||| |  ||||||||||||||  |||| |||  ||||||||| ||||||||||||    
T  45326018 atggaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctcacaa 45326105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 484
Target Start/End: Complemental strand, 16180454 - 16180358
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||| |||| | |||| || ||||||| ||||||||||||| | ||||   |  ||||||||||||||||||||||| | ||||| ||||    
T  16180454 aaaatgttacatcaacaccatttattcctacaccc-attgtacaccccacgtattataaatattttggtaaattcatctcacaaccacactttatctt 16180358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 4e-39; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 17208074 - 17208180
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||| |||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  17208074 ggaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcacaaccatactttctctt 17208173  T
Q  485 tcatctc 491  Q
    |||||||    
T  17208174 tcatctc 17208180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 30622818 - 30622713
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||  |||||||||||| |||||||||| ||||||||||||    
T  30622818 ggaaaatgttacatgaacatcctttaatcatacaccctattgta-agcccatgcattaaggatattttggtaaatttatctcacaaccatactttctctt 30622720  T
Q  485 tcatctc 491  Q
    |||||||    
T  30622719 tcatctc 30622713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 384 - 491
Target Start/End: Complemental strand, 32473495 - 32473388
Alignment:
Q  384 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 483  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||| |||  ||||||||| ||||||||||||| |||||||||||    
T  32473495 tggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcacaaccatactttctct 32473396  T
Q  484 ttcatctc 491  Q
    ||||||||    
T  32473395 ttcatctc 32473388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 7617133 - 7617232
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| |||||||| | ||| ||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  7617133 ggaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 7617232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 484
Target Start/End: Complemental strand, 2614752 - 2614650
Alignment:
Q  382 tatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttct 481  Q
    |||||||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| |    
T  2614752 tatggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttat 2614653  T
Q  482 ctt 484  Q
    |||    
T  2614652 ctt 2614650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 380 - 470
Target Start/End: Original strand, 38470574 - 38470664
Alignment:
Q  380 tttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 470  Q
    |||| |||||||||||||| |||| |||||| |||||||  | ||||||||||||||| ||||||||  ||||||||||||||| ||||||    
T  38470574 tttaaggaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcacaa 38470664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 484
Target Start/End: Original strand, 22512303 - 22512404
Alignment:
Q  383 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 482  Q
    ||||||||||||||||||||| |||||| || ||||| | ||||||||| ||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||    
T  22512303 atggaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatc 22512402  T
Q  483 tt 484  Q
    ||    
T  22512403 tt 22512404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 33801469 - 33801568
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||||||||||| |  ||||||| ||||||||| ||||| |||| |||  |||| |||| ||||||||||||| | ||||| ||||    
T  33801469 ggaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 33801568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 41334763 - 41334664
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| |||||||||  ||| ||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  41334763 ggaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 41334664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 484
Target Start/End: Original strand, 5256997 - 5257094
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||| |||| | |||| ||||||| || ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  5256997 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatctt 5257094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 380 - 484
Target Start/End: Original strand, 18033977 - 18034081
Alignment:
Q  380 tttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatacttt 479  Q
    |||| ||||||||||||||||||| |||||| || ||||| | ||||||||||| ||| |||| |||  |||| |||| ||||||||||||| | |||||    
T  18033977 tttaaggaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacacttt 18034076  T
Q  480 ctctt 484  Q
     ||||    
T  18034077 atctt 18034081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 385 - 457
Target Start/End: Complemental strand, 33855143 - 33855071
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaa 457  Q
    ||||||||||||||||||| |||||| || ||||||| ||||||||||||||| |||| | || |||||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaa 33855071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 4e-39; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 9434124 - 9434230
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||    
T  9434124 ggaaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 9434223  T
Q  485 tcatctc 491  Q
    |||||||    
T  9434224 tcatctc 9434230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 10457992 - 10457886
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||||||    
T  10457992 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcacaaccatactttctctt 10457893  T
Q  485 tcatctc 491  Q
    |||||||    
T  10457892 tcatctc 10457886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 379 - 491
Target Start/End: Original strand, 51757587 - 51757699
Alignment:
Q  379 ttttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactt 478  Q
    ||||||||||||| |||||| |||| |||||||||||||||||||||||||||| ||||||||| |||| |||| |||| ||||||||||||| ||||||    
T  51757587 ttttatggaaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctcacaaccatactt 51757686  T
Q  479 tctctttcatctc 491  Q
    |||||||||||||    
T  51757687 tctctttcatctc 51757699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 25996268 - 25996374
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||||||||||| | |||||||||||||||  ||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  25996268 ggaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcacaaccatattttctctt 25996367  T
Q  485 tcatctc 491  Q
    |||||||    
T  25996368 tcatctc 25996374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 4190365 - 4190259
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  ||| ||||  ||  ||||||||||||||||||||||| ||||||||||||    
T  4190365 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcacaaccatactttctctt 4190266  T
Q  485 tcatctc 491  Q
    |||||||    
T  4190265 tcatctc 4190259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 385 - 490
Target Start/End: Complemental strand, 52628077 - 52627972
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||| |||||| |||||||||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||||||||  ||||||||||||    
T  52628077 ggaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcacaatcatactttctctt 52627978  T
Q  485 tcatct 490  Q
    ||||||    
T  52627977 tcatct 52627972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 383 - 491
Target Start/End: Original strand, 34791827 - 34791935
Alignment:
Q  383 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 482  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||| ||| ||||||||| |||| ||||  ||| ||||||||||||| ||||||||||    
T  34791827 atggaaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcacaaccatactttctc 34791926  T
Q  483 tttcatctc 491  Q
    |||||||||    
T  34791927 tttcatctc 34791935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 471
Target Start/End: Original strand, 42100685 - 42100774
Alignment:
Q  382 tatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    |||||||||||||||||||||| |||||| || ||||||  ||||||||||||||| |||| |||  ||||||||| |||||||||||||    
T  42100685 tatggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaac 42100774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 383 - 471
Target Start/End: Complemental strand, 45127030 - 45126942
Alignment:
Q  383 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    |||||||||||||||| |||| |||||| ||||||| || ||||||||||||||| |||| |||  ||||||||| |||||||||||||    
T  45127030 atggaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaac 45126942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 484
Target Start/End: Original strand, 40808860 - 40808964
Alignment:
Q  380 tttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatacttt 479  Q
    |||| |||||||||||||| |||| | |||| || ||||||| ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | |||||    
T  40808860 tttaaggaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttt 40808959  T
Q  480 ctctt 484  Q
     ||||    
T  40808960 atctt 40808964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 46941053 - 46941152
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| || |||| |  ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  46941053 ggaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 46941152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 485
Target Start/End: Complemental strand, 53273790 - 53273684
Alignment:
Q  379 ttttatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactt 478  Q
    ||||| ||||||||||| ||||||||| |||| || || |||  |||||||| |||||| |||| |||  ||||||||| ||||||||||||| ||||||    
T  53273790 ttttaaggaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactt 53273691  T
Q  479 tctcttt 485  Q
    | |||||    
T  53273690 tatcttt 53273684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 386 - 484
Target Start/End: Original strand, 54237097 - 54237195
Alignment:
Q  386 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 54237195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 384 - 484
Target Start/End: Original strand, 36150129 - 36150229
Alignment:
Q  384 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 483  Q
    |||||||||||||||||| | |||||| |||||||||| ||| ||||||| ||| || | |||  ||||||||| ||||||||||||| | ||||| |||    
T  36150129 tggaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcacaaccacactttatct 36150228  T
Q  484 t 484  Q
    |    
T  36150229 t 36150229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 24688502 - 24688403
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| |  ||||| | ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  24688502 ggaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 24688403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 25413681 - 25413780
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| || ||||||| ||||||||||  ||| |||| |||  |||| |||| ||||||||||||| | ||||| ||||    
T  25413681 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 25413780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 258
Target Start/End: Original strand, 41075636 - 41075746
Alignment:
Q  150 tgatcttaatgtgcagatttttgttgatcgacatgaccgatatgtcatttgcacttttgctaatgc--aagtgtttataatgttggtcataatgtgttca 247  Q
    ||||| ||||||| ||||||| ||||||||||||| ||||||||||||| |||| ||| ||   ||  |||||||||| ||||||||| |||| |||| |    
T  41075636 tgatcctaatgtgaagattttagttgatcgacatgcccgatatgtcattagcaccttttctggcgcgtaagtgtttattatgttggtcctaatatgttga 41075735  T
Q  248 tcctaatgtgt 258  Q
    | |||||||||    
T  41075736 ttctaatgtgt 41075746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 54246248 - 54246149
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| || ||||||| ||||||||||| ||| ||||  ||  |||| |||| ||||||||||||| | ||||| ||||    
T  54246248 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcacaaccacactttatctt 54246149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 386 - 484
Target Start/End: Original strand, 40480750 - 40480848
Alignment:
Q  386 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||| |||||| |||||  ||| |||||||| || ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  40480750 gaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 40480848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 386 - 484
Target Start/End: Complemental strand, 42394518 - 42394420
Alignment:
Q  386 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||| |||||| || ||||  | ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  42394518 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42394420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 484
Target Start/End: Original strand, 27748565 - 27748662
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||| | |||| |||||||||  ||| ||||||  ||| |||| |||  ||||||||| ||||||||||||| ||||||| ||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcacaacaatactttatctt 27748662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 427 - 484
Target Start/End: Original strand, 51249350 - 51249407
Alignment:
Q  427 tacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||| |||||||||||||  ||||||||||||||||||||||| | ||||||||||    
T  51249350 tacacctcatgcattaaggatattttggtaaattcatctcacaaccacactttctctt 51249407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 484
Target Start/End: Complemental strand, 53581956 - 53581859
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||  ||||| |||||||| | |||||||| || ||| |||| |||  ||||| ||| ||||||||||||| | ||||| ||||    
T  53581956 aaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcacaaccacactttatctt 53581859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 47191125 - 47191027
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| || ||||||  |||||||| |||||| ||||  ||  ||||| ||| ||||||||||||| | ||||| ||||    
T  47191125 ggaaaatgttacatgaacaccctttattcctacacctcattgtaca-cccatgtattagagatattttgataagttcatctcacaaccacactttatctt 47191027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 1e-36; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 385 - 491
Target Start/End: Original strand, 33242403 - 33242509
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| | |||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||  ||||||||||||    
T  33242403 ggaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcacaaacatactttctctt 33242502  T
Q  485 tcatctc 491  Q
    |||||||    
T  33242503 tcatctc 33242509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 387 - 491
Target Start/End: Original strand, 27441544 - 27441648
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 486  Q
    ||||||||||||||||| |||||||||||||||||||||||||| || ||| ||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctttc 27441643  T
Q  487 atctc 491  Q
    |||||    
T  27441644 atctc 27441648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 382 - 485
Target Start/End: Original strand, 33253910 - 33254013
Alignment:
Q  382 tatggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttct 481  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||  ||||||| |    
T  33253910 tatggaaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttat 33254009  T
Q  482 cttt 485  Q
    ||||    
T  33254010 cttt 33254013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 3213400 - 3213499
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||| |||| |||||| ||||||| |  ||||||||||||||| ||||||||  ||||||||||||||| ||||||| ||||||| ||||    
T  3213400 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccatactttatctt 3213499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 484
Target Start/End: Complemental strand, 13743323 - 13743222
Alignment:
Q  383 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 482  Q
    ||||||||||||||||||||| | |||| ||||||| || ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||    
T  13743323 atggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 13743224  T
Q  483 tt 484  Q
    ||    
T  13743223 tt 13743222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 484
Target Start/End: Complemental strand, 13748823 - 13748722
Alignment:
Q  383 atggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctc 482  Q
    ||||||||||||||||||||| | |||| ||||||| || ||||||||||||||| |||| |||  ||||||||| ||||||||||||| | ||||| ||    
T  13748823 atggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatc 13748724  T
Q  483 tt 484  Q
    ||    
T  13748723 tt 13748722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 31109322 - 31109216
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||||||||||| || ||| ||||||||||||| || |||  ||||| |||||||| || || || | | ||||||||    
T  31109322 ggaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttgataaattcaacttacgaccacattttctctt 31109223  T
Q  485 tcatctc 491  Q
    |||||||    
T  31109222 tcatctc 31109216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 385 - 470
Target Start/End: Complemental strand, 7273435 - 7273350
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 470  Q
    ||||||||||||||||||| |||||| || |||||| |||||||||||||||| ||||  ||  ||||||||| ||||||||||||    
T  7273435 ggaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcacaa 7273350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 387 - 471
Target Start/End: Complemental strand, 24204085 - 24204001
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    ||||||||||||||||| | |||| || ||||||||||||||||| ||||| |||| |||  ||||||||| |||||||||||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcacaac 24204001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 9698433 - 9698334
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| || |||| || ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  9698433 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 9698334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 26670109 - 26670010
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| || ||||||  |||||||||| |||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  26670109 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 26670010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 150 - 258
Target Start/End: Complemental strand, 31390411 - 31390301
Alignment:
Q  150 tgatcttaatgtgcagatttttgttgatcgacatgaccgatatgtcatttgcacttttgctaatgc--aagtgtttataatgttggtcataatgtgttca 247  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||||| |||| ||| ||   ||  |||||||||| ||||||||| |||| |||| |    
T  31390411 tgatcctaatgtgaagattttagttgatcgacatgaccgatatgtcattagcaccttttctggcgcgtaagtgtttattatgttggtcctaatatgttga 31390312  T
Q  248 tcctaatgtgt 258  Q
    | |||||||||    
T  31390311 ttctaatgtgt 31390301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 471
Target Start/End: Original strand, 7367549 - 7367635
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaac 471  Q
    ||||||||||| ||||||||| |||| |||||||||  |||||||| |||||| |||| |||  ||||||||| |||||||||||||    
T  7367549 ggaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaac 7367635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 384 - 484
Target Start/End: Original strand, 30014342 - 30014442
Alignment:
Q  384 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 483  Q
    |||||||||||||||||||| |||||| || |||| || ||| |||| |||||| |||| | |  ||||||||| ||||||||||||| ||||||| |||    
T  30014342 tggaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcacaaccatactttatct 30014441  T
Q  484 t 484  Q
    |    
T  30014442 t 30014442  T

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Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 21293777 - 21293678
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||| |||| |||||| |||||||    | ||||||||||||| ||||||||  ||||||||||||||| ||||||| | ||||| ||||    
T  21293777 ggaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 21293678  T

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Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 26466799 - 26466898
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||| |||| |||||| || ||||||| ||||||||| ||||| |||| ||   ||||||||| ||||||||||||| | ||||| ||||    
T  26466799 ggaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcacaaccacactttatctt 26466898  T

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Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 7292747 - 7292846
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||| ||||| | |||| |||||||||  ||| ||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  7292747 ggaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 7292846  T

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Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 21279929 - 21280028
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| |  ||||  | |||| ||| |||||| |||| |||  ||||||||||||||||||||||| | ||||| ||||    
T  21279929 ggaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcacaaccacactttatctt 21280028  T

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Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 30735984 - 30736067
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 470  Q
    |||||||||||||||||   |||| || ||||||| |||||||||| |||| ||||  ||  ||||||||| ||||||||||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcacaa 30736067  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 300
Target Start/End: Complemental strand, 12839281 - 12839252
Alignment:
Q  271 gggagcacccaaggactgtttgtgtgtgct 300  Q
    ||||||||||||||||||||||||||||||    
T  12839281 gggagcacccaaggactgtttgtgtgtgct 12839252  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 300
Target Start/End: Complemental strand, 25552841 - 25552812
Alignment:
Q  271 gggagcacccaaggactgtttgtgtgtgct 300  Q
    ||||||||||||||||||||||||||||||    
T  25552841 gggagcacccaaggactgtttgtgtgtgct 25552812  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 300
Target Start/End: Complemental strand, 25994007 - 25993978
Alignment:
Q  271 gggagcacccaaggactgtttgtgtgtgct 300  Q
    ||||||||||||||||||||||||||||||    
T  25994007 gggagcacccaaggactgtttgtgtgtgct 25993978  T

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Target: scaffold0003 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 387 - 491
Target Start/End: Complemental strand, 45817 - 45713
Alignment:
Q  387 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctttc 486  Q
    ||||||||||||||||| |||||||||||||||||||||||||| || ||| ||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctttc 45718  T
Q  487 atctc 491  Q
    |||||    
T  45717 atctc 45713  T

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Target: scaffold0100 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 384 - 491
Target Start/End: Complemental strand, 35557 - 35450
Alignment:
Q  384 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctct 483  Q
    ||||||||||||||| |||| | |||||||||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||    
T  35557 tggaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcacaaccatactttctct 35458  T
Q  484 ttcatctc 491  Q
    ||||||||    
T  35457 ttcatctc 35450  T

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Target: scaffold0385 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 11251 - 11350
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||| |||||||||  ||||| |||||||||| ||||||||||||||  |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  11251 ggaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcacaaccacactttatctt 11350  T

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Target: scaffold0119 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 685 - 784
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| || ||||||  |||||||||| |||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  685 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 784  T

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Target: scaffold0038 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 386 - 484
Target Start/End: Original strand, 112656 - 112754
Alignment:
Q  386 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    |||||||||||||||||| |||||| || ||||  | ||||||||||| ||| |||| |||  ||||||||| ||||||||||||| | ||||| ||||    
T  112656 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 112754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 14288 - 14189
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| |  ||||||| |||||||| || ||| |||| |||  |||| |||| ||||||||||||| | ||||| ||||    
T  14288 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 14189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 24616 - 24517
Alignment:
Q  385 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaactatactttctctt 484  Q
    ||||||||||||||||||| |||||| |  ||||||| |||||||| || ||| |||| |||  |||| |||| ||||||||||||| | ||||| ||||    
T  24616 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 24517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 470
Target Start/End: Complemental strand, 23522 - 23436
Alignment:
Q  384 tggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacgttttggtaaattcatctcacaa 470  Q
    |||||||||||| ||||||| |||||| || ||||| | |||||||| |||||| ||||  ||  ||||||||| ||||||| ||||    
T  23522 tggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaa 23436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 300
Target Start/End: Complemental strand, 188244 - 188215
Alignment:
Q  271 gggagcacccaaggactgtttgtgtgtgct 300  Q
    ||||||||||||||||||||||||||||||    
T  188244 gggagcacccaaggactgtttgtgtgtgct 188215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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