View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0844_low_11 (Length: 498)

Name: NF0844_low_11
Description: NF0844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0844_low_11
NF0844_low_11
[»] chr7 (70 HSPs)
chr7 (95-289)||(5489045-5489239)
chr7 (285-465)||(20636614-20636795)
chr7 (285-461)||(20638486-20638663)
chr7 (288-461)||(21224484-21224658)
chr7 (275-461)||(42271318-42271504)
chr7 (288-461)||(27869327-27869501)
chr7 (291-461)||(2331015-2331185)
chr7 (290-465)||(17305764-17305940)
chr7 (281-461)||(3562565-3562745)
chr7 (303-465)||(35337650-35337812)
chr7 (290-461)||(24597647-24597819)
chr7 (284-460)||(19919736-19919911)
chr7 (288-465)||(48176091-48176268)
chr7 (289-461)||(31493910-31494082)
chr7 (290-461)||(19195345-19195517)
chr7 (303-465)||(41452377-41452540)
chr7 (288-472)||(18754387-18754572)
chr7 (285-461)||(8526791-8526967)
chr7 (284-465)||(36746631-36746812)
chr7 (287-461)||(11843310-11843484)
chr7 (358-464)||(21225677-21225782)
chr7 (288-453)||(13577926-13578090)
chr7 (287-467)||(26385260-26385439)
chr7 (374-463)||(44078000-44078090)
chr7 (289-461)||(14624607-14624774)
chr7 (367-461)||(10023916-10024010)
chr7 (358-472)||(10655399-10655512)
chr7 (292-461)||(39181939-39182106)
chr7 (360-461)||(5111512-5111611)
chr7 (359-464)||(3403180-3403286)
chr7 (283-460)||(9157183-9157357)
chr7 (358-465)||(23439662-23439770)
chr7 (386-465)||(39440248-39440328)
chr7 (374-432)||(6798075-6798133)
chr7 (374-462)||(3769489-3769578)
chr7 (358-461)||(24464646-24464748)
chr7 (374-461)||(26126339-26126426)
chr7 (359-461)||(4193621-4193722)
chr7 (289-348)||(8527040-8527099)
chr7 (291-465)||(25002712-25002883)
chr7 (358-458)||(4571478-4571577)
chr7 (360-464)||(23473060-23473165)
chr7 (374-465)||(43251349-43251441)
chr7 (281-348)||(31494156-31494223)
chr7 (404-465)||(9822227-9822289)
chr7 (404-465)||(10724152-10724214)
chr7 (384-449)||(24448187-24448253)
chr7 (286-348)||(26385507-26385569)
chr7 (285-339)||(33237411-33237465)
chr7 (292-348)||(13577789-13577845)
chr7 (285-348)||(48175957-48176021)
chr7 (412-462)||(5087118-5087169)
chr7 (289-348)||(11843177-11843236)
chr7 (387-461)||(15681727-15681802)
chr7 (289-348)||(20636864-20636923)
chr7 (285-348)||(24597512-24597575)
chr7 (289-348)||(27869195-27869254)
chr7 (318-348)||(3562461-3562491)
chr7 (412-461)||(6650632-6650682)
chr7 (302-348)||(19919616-19919662)
chr7 (374-460)||(29051704-29051789)
chr7 (370-399)||(5348139-5348168)
chr7 (303-348)||(19493562-19493607)
chr7 (369-465)||(23461149-23461246)
chr7 (283-348)||(24448038-24448103)
chr7 (394-461)||(6798014-6798082)
chr7 (288-348)||(10023784-10023844)
chr7 (374-422)||(15681682-15681730)
chr7 (290-346)||(15681878-15681934)
chr7 (302-346)||(42438034-42438078)
[»] chr3 (55 HSPs)
chr3 (289-461)||(48907424-48907596)
chr3 (287-461)||(26628157-26628332)
chr3 (288-461)||(27852883-27853057)
chr3 (288-461)||(25179576-25179750)
chr3 (285-461)||(3328945-3329122)
chr3 (290-461)||(13080894-13081066)
chr3 (286-460)||(4521950-4522125)
chr3 (290-461)||(22500727-22500898)
chr3 (289-461)||(8542609-8542782)
chr3 (290-461)||(8339072-8339244)
chr3 (293-465)||(23428747-23428920)
chr3 (287-461)||(30155277-30155450)
chr3 (289-465)||(10743408-10743583)
chr3 (286-461)||(22447872-22448052)
chr3 (318-465)||(28173857-28174005)
chr3 (302-465)||(25022791-25022952)
chr3 (368-461)||(28155014-28155107)
chr3 (360-462)||(48860773-48860875)
chr3 (302-465)||(46673175-46673338)
chr3 (313-465)||(3780906-3781054)
chr3 (286-461)||(26633491-26633663)
chr3 (358-465)||(22416401-22416510)
chr3 (358-461)||(26127038-26127139)
chr3 (302-465)||(33279713-33279876)
chr3 (358-465)||(9496344-9496450)
chr3 (368-461)||(34878661-34878754)
chr3 (284-461)||(40836310-40836488)
chr3 (358-461)||(26177088-26177189)
chr3 (358-422)||(20001778-20001842)
chr3 (290-460)||(25336358-25336527)
chr3 (412-465)||(6927593-6927646)
chr3 (412-461)||(32960774-32960823)
chr3 (286-470)||(36311148-36311332)
chr3 (286-392)||(32960811-32960914)
chr3 (292-461)||(4775852-4776023)
chr3 (313-460)||(33104965-33105112)
chr3 (285-348)||(34878524-34878587)
chr3 (412-465)||(3821004-3821058)
chr3 (283-348)||(26628018-26628083)
chr3 (289-457)||(1743254-1743417)
chr3 (288-348)||(22447738-22447798)
chr3 (289-348)||(20001954-20002012)
chr3 (281-348)||(28173720-28173787)
chr3 (290-348)||(28154882-28154940)
chr3 (287-348)||(1743495-1743556)
chr3 (287-348)||(13081140-13081201)
chr3 (358-422)||(46387745-46387808)
chr3 (289-348)||(3328812-3328871)
chr3 (289-348)||(26633360-26633418)
chr3 (302-348)||(8338952-8338998)
chr3 (285-343)||(32960640-32960698)
chr3 (303-348)||(4776064-4776109)
chr3 (358-457)||(35201131-35201229)
chr3 (288-348)||(22500594-22500654)
chr3 (288-348)||(25179821-25179881)
[»] chr6 (44 HSPs)
chr6 (287-464)||(24051006-24051183)
chr6 (287-461)||(18791355-18791529)
chr6 (289-465)||(32451725-32451902)
chr6 (289-460)||(31210793-31210965)
chr6 (290-461)||(26710439-26710611)
chr6 (288-461)||(4597537-4597711)
chr6 (290-461)||(24603361-24603533)
chr6 (304-461)||(15298500-15298657)
chr6 (290-465)||(25819685-25819860)
chr6 (287-465)||(22968283-22968460)
chr6 (287-465)||(23819933-23820110)
chr6 (287-461)||(14572310-14572483)
chr6 (286-465)||(8412754-8412934)
chr6 (302-465)||(3118693-3118855)
chr6 (285-461)||(34833920-34834097)
chr6 (289-452)||(32682419-32682581)
chr6 (368-461)||(35102623-35102716)
chr6 (290-422)||(18749299-18749432)
chr6 (359-465)||(19282339-19282445)
chr6 (290-453)||(22269410-22269570)
chr6 (291-461)||(4013798-4013968)
chr6 (358-456)||(4370967-4371065)
chr6 (384-461)||(18749228-18749305)
chr6 (359-467)||(16415456-16415564)
chr6 (378-470)||(24615817-24615908)
chr6 (358-467)||(12427300-12427411)
chr6 (404-465)||(2636891-2636953)
chr6 (359-465)||(26240025-26240133)
chr6 (368-461)||(9241732-9241824)
chr6 (289-344)||(35102713-35102768)
chr6 (416-465)||(23124848-23124898)
chr6 (303-422)||(2058993-2059111)
chr6 (283-347)||(6842327-6842391)
chr6 (284-399)||(23124883-23124996)
chr6 (303-348)||(15298730-15298775)
chr6 (404-463)||(12291547-12291607)
chr6 (425-461)||(20863860-20863896)
chr6 (288-348)||(35102489-35102549)
chr6 (302-348)||(4597417-4597463)
chr6 (303-348)||(12291430-12291475)
chr6 (358-399)||(20863891-20863932)
chr6 (286-346)||(8821869-8821929)
chr6 (360-461)||(14195631-14195732)
chr6 (288-348)||(18749095-18749155)
[»] chr1 (49 HSPs)
chr1 (288-461)||(24961951-24962125)
chr1 (287-461)||(4059654-4059829)
chr1 (289-461)||(3616798-3616971)
chr1 (281-461)||(29676070-29676251)
chr1 (289-465)||(19078053-19078228)
chr1 (289-465)||(19125943-19126118)
chr1 (302-467)||(24749809-24749976)
chr1 (302-465)||(46432344-46432508)
chr1 (288-461)||(24196259-24196433)
chr1 (287-461)||(28920789-28920958)
chr1 (290-465)||(43706782-43706957)
chr1 (287-465)||(51719250-51719427)
chr1 (290-461)||(48471995-48472165)
chr1 (290-472)||(2425225-2425407)
chr1 (287-465)||(2657640-2657818)
chr1 (359-461)||(4455174-4455277)
chr1 (358-460)||(28750346-28750448)
chr1 (287-465)||(18606811-18606990)
chr1 (359-467)||(29182126-29182234)
chr1 (358-461)||(16551775-16551879)
chr1 (359-422)||(21148048-21148111)
chr1 (375-461)||(27092984-27093070)
chr1 (374-464)||(47685186-47685276)
chr1 (404-465)||(31084740-31084801)
chr1 (358-453)||(22786099-22786194)
chr1 (302-348)||(16551656-16551702)
chr1 (286-348)||(51719119-51719181)
chr1 (287-348)||(16972096-16972157)
chr1 (284-348)||(2657507-2657571)
chr1 (284-348)||(3617044-3617108)
chr1 (288-463)||(9387693-9387868)
chr1 (285-348)||(2425469-2425532)
chr1 (289-348)||(4059521-4059580)
chr1 (293-348)||(21148193-21148248)
chr1 (302-348)||(28552317-28552363)
chr1 (285-347)||(51685809-51685871)
chr1 (278-343)||(27092841-27092906)
chr1 (291-348)||(43706655-43706712)
chr1 (291-348)||(50334719-50334776)
chr1 (359-465)||(2260506-2260611)
chr1 (374-462)||(26605408-26605494)
chr1 (288-348)||(46432214-46432274)
chr1 (360-465)||(21185278-21185380)
chr1 (289-348)||(24196507-24196566)
chr1 (303-460)||(10684807-10684965)
chr1 (318-348)||(48471891-48471921)
chr1 (374-470)||(16971935-16972032)
chr1 (292-348)||(16878931-16878987)
chr1 (284-348)||(24962199-24962263)
[»] chr2 (32 HSPs)
chr2 (289-461)||(11175906-11176079)
chr2 (288-461)||(9051159-9051333)
chr2 (284-461)||(38716188-38716365)
chr2 (293-461)||(2986689-2986858)
chr2 (287-461)||(18537960-18538135)
chr2 (288-461)||(30714406-30714580)
chr2 (288-461)||(25298933-25299106)
chr2 (284-465)||(4587854-4588037)
chr2 (289-459)||(6763851-6764022)
chr2 (288-461)||(15735062-15735236)
chr2 (283-465)||(15700740-15700923)
chr2 (303-461)||(9787573-9787731)
chr2 (286-465)||(22191042-22191222)
chr2 (387-461)||(17368314-17368388)
chr2 (358-470)||(331781-331894)
chr2 (359-470)||(2190605-2190714)
chr2 (377-465)||(4104952-4105040)
chr2 (394-465)||(21494555-21494626)
chr2 (374-461)||(22387200-22387287)
chr2 (359-465)||(28365581-28365686)
chr2 (384-465)||(33199547-33199630)
chr2 (303-457)||(36464289-36464441)
chr2 (286-348)||(25884174-25884236)
chr2 (358-460)||(25884310-25884412)
chr2 (285-348)||(30714270-30714333)
chr2 (384-458)||(1020485-1020559)
chr2 (288-348)||(2986932-2986992)
chr2 (290-348)||(9787803-9787861)
chr2 (358-399)||(15147814-15147854)
chr2 (384-463)||(2123469-2123549)
chr2 (374-461)||(26829221-26829308)
chr2 (412-467)||(28319132-28319188)
[»] chr4 (52 HSPs)
chr4 (285-465)||(41877156-41877333)
chr4 (289-461)||(13397807-13397980)
chr4 (287-467)||(5304473-5304652)
chr4 (290-461)||(4357252-4357424)
chr4 (281-465)||(9195792-9195975)
chr4 (288-465)||(43793759-43793936)
chr4 (285-465)||(35475286-35475465)
chr4 (358-460)||(15058951-15059053)
chr4 (290-461)||(52838231-52838399)
chr4 (284-465)||(55780381-55780562)
chr4 (284-465)||(55844561-55844742)
chr4 (290-462)||(25011735-25011908)
chr4 (290-465)||(4433311-4433485)
chr4 (284-460)||(41034629-41034807)
chr4 (290-458)||(2931321-2931490)
chr4 (289-461)||(6789090-6789263)
chr4 (358-460)||(13826552-13826653)
chr4 (360-460)||(1588546-1588645)
chr4 (283-465)||(19232471-19232655)
chr4 (302-461)||(27018229-27018386)
chr4 (383-467)||(15795411-15795495)
chr4 (287-465)||(45633435-45633613)
chr4 (288-348)||(18259357-18259417)
chr4 (356-465)||(23362500-23362607)
chr4 (359-459)||(4098726-4098827)
chr4 (379-467)||(2715843-2715930)
chr4 (284-453)||(15734394-15734562)
chr4 (289-399)||(25618790-25618901)
chr4 (358-464)||(9397260-9397367)
chr4 (374-461)||(51291301-51291389)
chr4 (376-467)||(24626346-24626438)
chr4 (288-348)||(43793629-43793689)
chr4 (284-348)||(45633682-45633746)
chr4 (302-348)||(4357497-4357543)
chr4 (289-343)||(24626221-24626275)
chr4 (412-461)||(25618759-25618809)
chr4 (374-424)||(48158681-48158731)
chr4 (377-458)||(43336075-43336156)
chr4 (284-348)||(4098902-4098966)
chr4 (288-348)||(4433181-4433241)
chr4 (415-465)||(33978856-33978908)
chr4 (289-344)||(3927665-3927720)
chr4 (284-339)||(4099044-4099099)
chr4 (288-339)||(20919333-20919384)
chr4 (289-348)||(25011980-25012039)
chr4 (302-348)||(2715731-2715777)
chr4 (289-347)||(3928902-3928960)
chr4 (290-348)||(9397435-9397493)
chr4 (303-348)||(47869899-47869944)
chr4 (288-348)||(13826418-13826478)
chr4 (285-337)||(17138540-17138592)
chr4 (282-346)||(25685867-25685931)
[»] chr8 (44 HSPs)
chr8 (289-461)||(17648242-17648415)
chr8 (289-461)||(4518999-4519172)
chr8 (290-461)||(30784396-30784568)
chr8 (290-461)||(8802532-8802703)
chr8 (288-465)||(38630053-38630231)
chr8 (285-461)||(12723393-12723570)
chr8 (285-465)||(19924260-19924441)
chr8 (289-465)||(44146971-44147146)
chr8 (293-461)||(5192403-5192572)
chr8 (287-461)||(4807732-4807908)
chr8 (290-461)||(33895375-33895546)
chr8 (288-429)||(21929967-21930107)
chr8 (288-456)||(22452310-22452479)
chr8 (358-461)||(19391519-19391622)
chr8 (318-461)||(21666406-21666549)
chr8 (283-465)||(18881631-18881812)
chr8 (284-454)||(3380193-3380363)
chr8 (358-465)||(32400450-32400557)
chr8 (287-348)||(19392812-19392873)
chr8 (359-467)||(3208050-3208158)
chr8 (362-465)||(4423157-4423262)
chr8 (414-461)||(23565214-23565261)
chr8 (289-348)||(5192271-5192330)
chr8 (302-348)||(15869349-15869395)
chr8 (358-461)||(1824676-1824777)
chr8 (358-461)||(1859121-1859222)
chr8 (358-461)||(7117246-7117348)
chr8 (283-348)||(33895619-33895684)
chr8 (278-348)||(4518857-4518927)
chr8 (313-461)||(18253018-18253164)
chr8 (279-348)||(44147216-44147285)
chr8 (288-348)||(4807598-4807658)
chr8 (382-461)||(41385622-41385702)
chr8 (425-467)||(41688236-41688278)
chr8 (287-348)||(18881501-18881562)
chr8 (287-344)||(32968453-32968510)
chr8 (287-348)||(38612216-38612277)
chr8 (287-348)||(38613417-38613478)
chr8 (279-344)||(38974784-38974849)
chr8 (279-344)||(39005882-39005947)
chr8 (286-338)||(2053145-2053197)
chr8 (414-461)||(16233581-16233629)
chr8 (288-348)||(19391386-19391445)
chr8 (284-348)||(30784259-30784323)
[»] chr5 (45 HSPs)
chr5 (285-461)||(245591-245766)
chr5 (290-461)||(18695004-18695175)
chr5 (288-461)||(25557007-25557180)
chr5 (289-461)||(26639169-26639342)
chr5 (284-461)||(23765522-23765699)
chr5 (284-461)||(23815370-23815547)
chr5 (288-472)||(38408627-38408811)
chr5 (286-465)||(10379279-10379457)
chr5 (318-461)||(16901129-16901271)
chr5 (288-462)||(36641141-36641316)
chr5 (284-465)||(40428767-40428947)
chr5 (292-467)||(19169346-19169521)
chr5 (358-465)||(31055442-31055549)
chr5 (288-464)||(10293216-10293391)
chr5 (302-465)||(16307604-16307769)
chr5 (289-427)||(8645796-8645935)
chr5 (289-453)||(17704727-17704887)
chr5 (360-465)||(38476597-38476703)
chr5 (292-461)||(7835722-7835881)
chr5 (358-465)||(7187260-7187365)
chr5 (360-467)||(34125130-34125238)
chr5 (289-399)||(31648055-31648165)
chr5 (292-461)||(15885297-15885465)
chr5 (359-465)||(23040076-23040182)
chr5 (359-465)||(2373215-2373321)
chr5 (284-461)||(35302046-35302223)
chr5 (356-461)||(37961380-37961486)
chr5 (374-464)||(462851-462941)
chr5 (283-348)||(20654040-20654105)
chr5 (412-467)||(8673982-8674038)
chr5 (374-461)||(17825629-17825716)
chr5 (359-428)||(41663689-41663756)
chr5 (287-348)||(31055312-31055373)
chr5 (288-348)||(18695248-18695308)
chr5 (285-341)||(31648237-31648293)
chr5 (289-348)||(16900996-16901055)
chr5 (288-343)||(23765418-23765473)
chr5 (288-343)||(23815266-23815321)
chr5 (305-348)||(24025036-24025079)
chr5 (286-348)||(2373391-2373453)
chr5 (424-465)||(38322335-38322377)
chr5 (302-348)||(40428651-40428697)
chr5 (374-456)||(20653905-20653987)
chr5 (284-348)||(31576487-31576551)
chr5 (284-348)||(38408873-38408937)
[»] scaffold0179 (2 HSPs)
scaffold0179 (289-461)||(5781-5954)
scaffold0179 (288-348)||(5648-5708)
[»] scaffold0025 (2 HSPs)
scaffold0025 (289-461)||(61813-61986)
scaffold0025 (284-461)||(19279-19454)
[»] scaffold0001 (1 HSPs)
scaffold0001 (286-467)||(142073-142254)
[»] scaffold0607 (2 HSPs)
scaffold0607 (288-465)||(2177-2353)
scaffold0607 (289-348)||(2047-2106)
[»] scaffold0419 (2 HSPs)
scaffold0419 (290-461)||(3092-3264)
scaffold0419 (302-348)||(2973-3019)
[»] scaffold1202 (1 HSPs)
scaffold1202 (287-465)||(1902-2080)
[»] scaffold0062 (2 HSPs)
scaffold0062 (283-465)||(49652-49835)
scaffold0062 (283-465)||(62191-62374)
[»] scaffold0060 (1 HSPs)
scaffold0060 (281-465)||(66174-66350)
[»] scaffold0087 (1 HSPs)
scaffold0087 (289-461)||(25096-25269)
[»] scaffold0406 (1 HSPs)
scaffold0406 (290-460)||(1997-2162)
[»] scaffold0267 (1 HSPs)
scaffold0267 (358-460)||(3701-3801)
[»] scaffold1875 (2 HSPs)
scaffold1875 (358-465)||(884-991)
scaffold1875 (288-348)||(754-814)
[»] scaffold0150 (1 HSPs)
scaffold0150 (369-464)||(5911-6007)
[»] scaffold0683 (1 HSPs)
scaffold0683 (288-413)||(5288-5413)
[»] scaffold0002 (4 HSPs)
scaffold0002 (365-467)||(455102-455205)
scaffold0002 (359-465)||(455000-455107)
scaffold0002 (291-348)||(455274-455331)
scaffold0002 (284-348)||(436354-436418)
[»] scaffold0103 (1 HSPs)
scaffold0103 (404-465)||(3056-3118)
[»] scaffold0024 (1 HSPs)
scaffold0024 (313-461)||(43956-44102)
[»] scaffold0007 (1 HSPs)
scaffold0007 (408-461)||(250650-250703)
[»] scaffold0174 (1 HSPs)
scaffold0174 (289-461)||(29718-29888)
[»] scaffold0291 (1 HSPs)
scaffold0291 (359-460)||(9992-10092)
[»] scaffold0064 (1 HSPs)
scaffold0064 (412-461)||(54492-54542)
[»] scaffold0014 (1 HSPs)
scaffold0014 (377-461)||(112214-112299)
[»] scaffold0171 (1 HSPs)
scaffold0171 (425-465)||(9168-9208)


Alignment Details
Target: chr7 (Bit Score: 166; Significance: 1e-88; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 5489239 - 5489045
Alignment:
Q  95 aggaagatgtgtttggtgtgaagatgtcttgatcgtcatcatcatcaaccaattcttcatcttgatggcctttagcagacctagccattttccttttctt 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5489239 aggaagatgtgtttggtgtgaagatgtcttgatcgtcatcatcatcgaccaattcttcatcttgatggcctttagcagacctagccattttccttttctt 5489140  T
Q  195 gaacaaattttctcgagaaaatccaaagttagagnnnnnnntaatagtgttagcttaggaatgtgtgcacatcatgatgcaattagttattttta 289  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5489139 gaacaaattttctcgagaaaatccaaagttagagaaaaaaataatagtgttagcttagtaatgtgtgcacatcatgatgcaattagttattttta 5489045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 285 - 465
Target Start/End: Original strand, 20636614 - 20636795
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttagga 383  Q
    |||||||||||||||| ||||| ||||||||| ||| |||||||||||||||||||||||||||        | |||||||||||||||||||||||||     
T  20636614 ttttaggctaaacttcactttttgccctctaagttttaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttaggg 20636713  T
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20636714 aaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 20636795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 285 - 461
Target Start/End: Original strand, 20638486 - 20638663
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttagga 383  Q
    |||||||||||||||| ||||| ||||||||| ||| |||||||||||||||||||||||||||        | |||||||||||||||||||||||||     
T  20638486 ttttaggctaaacttcactttttgccctctaagttttaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttaggg 20638585  T
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20638586 aaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 20638663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 288 - 461
Target Start/End: Complemental strand, 21224658 - 21224484
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntag-caaaagtgaccccctatgtttaggaaaa 386  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||        || |||||||||||||||||||||||| |||    
T  21224658 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctgttaaaaaaaaaggcaaaagtgaccccctatgtttagggaaa 21224559  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21224558 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 21224484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 275 - 461
Target Start/End: Original strand, 42271318 - 42271504
Alignment:
Q  275 aattagttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgacccccta 374  Q
    ||||| || ||||| ||||||| |||  |||||||||||||| |||||||||||||||||||||||| ||||||       | |||||||||||||||||    
T  42271318 aattaattcttttttggctaaatttcatttttcgccctctaagtttcaaaatgttgcgattttggcctcctattaaaaaaatggcaaaagtgacccccta 42271417  T
Q  375 tgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  42271418 tgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatgtttacaaaaagttgcgattatg 42271504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 288 - 461
Target Start/End: Complemental strand, 27869501 - 27869327
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaa 386  Q
    |||| |||||||| ||||||||||||||| ||||||||||||||||||||||  |||||||        | ||||||||||||||||||||||||| |||    
T  27869501 taggttaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggagccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaa 27869402  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27869401 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 27869327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 291 - 461
Target Start/End: Original strand, 2331015 - 2331185
Alignment:
Q  291 gctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatg 390  Q
    |||||||||| ||||||| ||||||| ||| |||||||||| ||||||||||| ||||       | ||||||||||||||||||||||||| |||||||    
T  2331015 gctaaacttcacttttcgtcctctaagttttaaaatgttgcaattttggccccttattaaaaaaatggcaaaagtgaccccctatgtttagggaaatatg 2331114  T
Q  391 ctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||| || ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  2331115 ctcttttgacctcctaacataagggaaatatgctttttgactccttatctttacaaaaagttgcgattatg 2331185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 290 - 465
Target Start/End: Original strand, 17305764 - 17305940
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnta--gcaaaagtgaccccctatgtttaggaaaat 387  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||        |  |||||||||||||| |||||||||||||||    
T  17305764 ggctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaaatggcaaaagtgacccc-tatgtttaggaaaat 17305862  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||    
T  17305863 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatttttacaaaaagttgtgattatgaccc 17305940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 281 - 461
Target Start/End: Complemental strand, 3562745 - 3562565
Alignment:
Q  281 ttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgttt 379  Q
    ||||| ||||| |||||||| ||||||| ||||||| |||||||||||| ||||||||||||||||||        | |||||||||||||| |||||||    
T  3562745 ttattcttaggttaaacttcacttttcgtcctctaagtttcaaaatgttacgattttggccccctattaaaaaaaatggcaaaagtgacccc-tatgttt 3562647  T
Q  380 aggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3562646 agggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 3562565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 303 - 465
Target Start/End: Complemental strand, 35337812 - 35337650
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagct 402  Q
    |||||||| | ||| |||||||||||| ||||||||| || |||||       | ||||||||||||||||||||||||| |||||||||||||||| ||    
T  35337812 ttttcgccttttaagtttcaaaatgttacgattttggtcctctattaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttgacct 35337713  T
Q  403 tctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35337712 cctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 35337650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 290 - 461
Target Start/End: Complemental strand, 24597819 - 24597647
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||||||| |||||||||        | |||||||| |||||||||||||||| |||||    
T  24597819 ggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgtccccctattaaaaaaaatggcaaaagtaaccccctatgtttagggaaata 24597720  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||| || ||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  24597719 tgctcttttgacctcctaacataagggaaatatgttttttgaccccttctctttacaaaaagttgcgattatg 24597647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 284 - 460
Target Start/End: Complemental strand, 19919911 - 19919736
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntag-caaaagtgaccccctatgtttagg 382  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||        || |||||||||||||| |||||||||    
T  19919911 tttttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctattaaaaaaaaaggcaaaagtgaccccc-atgtttagg 19919813  T
Q  383 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattat 460  Q
    ||| ||||||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||||||| ||||||    
T  19919812 aaa-tatgctcttttgacctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgtgattat 19919736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 288 - 465
Target Start/End: Complemental strand, 48176268 - 48176091
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaa 386  Q
    |||||||||||   |||||||||| |||| |||||||||||||||||||||||||||||||        | |||||||| || ||||||||||||| |||    
T  48176268 taggctaaactctacttttcgccccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtaactccctatgtttagggaaa 48176169  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  48176168 tatgctcttttgaccc-ctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 48176091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 289 - 461
Target Start/End: Original strand, 31493910 - 31494082
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||| | ||||||| || |||| |||||||||||| ||||||||||||||||||        | |||||||||||||| |||||||||| ||||    
T  31493910 aggctaaactccacttttcggcccctaagtttcaaaatgttacgattttggccccctattaacaaaaatggcaaaagtgacccc-tatgtttagggaaat 31494008  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||| | |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  31494009 atgctcttttgaccctctaacataaggaaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 31494082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 290 - 461
Target Start/End: Complemental strand, 19195517 - 19195345
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||||| |||||| |||||||| ||| |||||||||| |||||| |||||||||        | ||||||||||||||||||||||||| |||||    
T  19195517 ggctaaacttcacttttcaccctctaagttttaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 19195418  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
     |||||||||| || ||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  19195417 cgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgtgattatg 19195345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 303 - 465
Target Start/End: Complemental strand, 41452540 - 41452377
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagc 401  Q
    |||||| ||||||| |||||||||||||  ||||||||||||||||        | |||||||||||||| |||||||||| |||||| ||||| ||| |    
T  41452540 ttttcgtcctctaagtttcaaaatgttgtaattttggccccctattaaaaaaaatggcaaaagtgaccccttatgtttagggaaatatactcttctgacc 41452441  T
Q  402 ttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41452440 tcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 41452377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 288 - 472
Target Start/End: Complemental strand, 18754572 - 18754387
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaa 386  Q
    |||| |||||| | |||||||||| |||| |||||||||||||||||||||| ||||||||        | |||||||||| || ||||||||||| |||    
T  18754572 taggttaaactccacttttcgccccctaagtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaaaagtgatcctctatgtttagggaaa 18754473  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccatattct 472  Q
    ||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||| ||| ||||    
T  18754472 tatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaatgttgcgattatgacacattttct 18754387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 285 - 461
Target Start/End: Original strand, 8526791 - 8526967
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttagga 383  Q
    |||||||||||| ||| |||||| |||||||| ||||||||| |||| |||||| |||||||||        | |||||| |||||||||||||||||||    
T  8526791 ttttaggctaaatttcacttttcaccctctaagtttcaaaattttgcaattttgaccccctattaataaaaatggcaaaaatgaccccctatgtttagga 8526890  T
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||| ||||| || ||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||||    
T  8526891 aaatatgctcatttgacctcctaacataagggaaatatgctttttgacc-cctatttttacaaaaagttgcaattatg 8526967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 284 - 465
Target Start/End: Complemental strand, 36746812 - 36746631
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntag-caaaagtgaccccctatgtttagg 382  Q
    ||||| ||||||||| | |||||||||| |||  ||| |||||||||| ||||||||||||||||        || ||||||| |||| |||||||||||    
T  36746812 ttttttggctaaactacacttttcgccc-ctatgttttaaaatgttgcaattttggccccctattaaaaaaaaaggcaaaagtaacccactatgtttagg 36746714  T
Q  383 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
     |||||||||||||||| || |||||||||| ||||||||| |||| ||| ||||||||||||||||||||||||||||||||    
T  36746713 gaaatatgctcttttgacctcctaacataagagaaatatgccttttaaccccttatctttacaaaaagttgcgattatgaccc 36746631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 287 - 461
Target Start/End: Complemental strand, 11843484 - 11843310
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaa 385  Q
    ||||||||||||   |||||||| |  ||| ||||||||||||||||||||| |||||||||        | |||||||||||| |||||||||||| ||    
T  11843484 ttaggctaaactctacttttcgctccttaagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgacctcctatgtttagggaa 11843385  T
Q  386 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||||| |  ||||||||||| ||||||||||||||||| |||||| |||||||||||||| ||||||    
T  11843384 atatgctcttttgaccc-ctaacataaggaaaatatgctttttgaccccttatccttacaaaaagttgcaattatg 11843310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 358 - 464
Target Start/End: Complemental strand, 21225782 - 21225677
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||| ||||| ||||||||||| |||||||||||||||| |  ||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||    
T  21225782 gcaaaagcgaccctctatgtttagggaaatatgctcttttgaccc-ctaacataagggaaatatgctatttgacccctcgtctttacaaaaagttgcgat 21225684  T
Q  458 tatgacc 464  Q
    |||||||    
T  21225683 tatgacc 21225677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 288 - 453
Target Start/End: Complemental strand, 13578090 - 13577926
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaa 386  Q
    |||||||||||   |||||||||| |||| ||||||||||||||||||||| ||| |||||        | |||||||||||||| |||||||| | |||    
T  13578090 taggctaaactctacttttcgccccctaagtttcaaaatgttgcgattttgaccctctattaaaaaaaatggcaaaagtgacccc-tatgtttaaggaaa 13577992  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttg 453  Q
    ||||||||||||| |  |||||||||||||||||||||||||||||  |||||| ||||||||||||    
T  13577991 tatgctcttttgaccc-ctaacataagggaaatatgctttttgaccctttatctatacaaaaagttg 13577926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 467
Target Start/End: Original strand, 26385260 - 26385439
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 386  Q
    |||||||||||| | ||||||| || |||||||||||||| ||||| |||||| ||||||||       | |||||||||||||   ||||||||| |||    
T  26385260 ttaggctaaactgcacttttcgtcccctaaatttcaaaatattgcgtttttggtcccctattaaaaaa-tggcaaaagtgacccatcatgtttagggaaa 26385358  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgacccat 467  Q
    |||||| |||||| |  |||||||||| |||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  26385359 tatgctattttgaccc-ctaacataagagaaatatgatattttgacctcttatcttctcaaaaagttgcgattatggcccat 26385439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 374 - 463
Target Start/End: Complemental strand, 44078090 - 44078000
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttaca-aaaagttgcgattatgac 463  Q
    ||||||||| |||||||||||||||| || |||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  44078090 atgtttagggaaatatgctcttttgacctcctaacataagagaaatatgttttttgaccccttatctttacaaaaaagttgcgattatgac 44078000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 289 - 461
Target Start/End: Original strand, 14624607 - 14624774
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 388  Q
    |||||||||| | ||||||| || |||| ||||||||| |||||||||||||||| ||||       | |||||||| ||||   |||||||||||||||    
T  14624607 aggctaaactacacttttcgtcccctaagtttcaaaatattgcgattttggcccc-tattaaaaaa-tggcaaaagtaaccca--atgtttaggaaaata 14624702  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||| |   ||||||||||||||||| ||||||||||  |||||||||||||||||||| ||||||    
T  14624703 tgctcttttgaccca-taacataagggaaatatactttttgaccctttatctttacaaaaagttgcaattatg 14624774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 367 - 461
Target Start/End: Complemental strand, 10024010 - 10023916
Alignment:
Q  367 accccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||||||| |||||||||||||||| |  || |||||||| ||||||  ||||||||| ||||||||||||||||||||||| ||||    
T  10024010 accccctatgtttagggaaatatgctcttttgacccccttacataaggaaaatattttttttgaccccttatctttacaaaaagttgcgaatatg 10023916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 472
Target Start/End: Original strand, 10655399 - 10655512
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 457  Q
    |||||| ||| |||||||||||||| |||||||||||||| | |  |||| ||||| |||||||  ||||| ||| ||||||||||||||||||||||||    
T  10655399 gcaaaaatgatcccctatgtttagggaaatatgctcttttaatcccctaatataagagaaatatt-tttttaaccccttatctttacaaaaagttgcgat 10655497  T
Q  458 tatgacccatattct 472  Q
    |||||||||| ||||    
T  10655498 tatgacccattttct 10655512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 292 - 461
Target Start/End: Original strand, 39181939 - 39182106
Alignment:
Q  292 ctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaatatg 390  Q
    ||||||| | ||||| |||||| || ||| |||||||||||||||||||| ||||||        | |||||| |||||||  ||||||||| |||||||    
T  39181939 ctaaactgcacttttggccctccaagttttaaaatgttgcgattttggcctcctattaaaaaaaatggcaaaaatgacccc--atgtttagggaaatatg 39182036  T
Q  391 ctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||| | |  ||||||||||||||||| | |||||||| ||||||||  ||||||||||||||||||    
T  39182037 ctcttttgaccat--aacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatg 39182106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 461
Target Start/End: Original strand, 5111512 - 5111611
Alignment:
Q  360 aaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgatt 458  Q
    ||||||||||||  ||||||||||||||||| |||||||| |  ||||||||||||||||||| | |||||||| ||||||||  |||||||||||||||    
T  5111512 aaaagtgacccc--atgtttaggaaaatatgttcttttgaccc-ctaacataagggaaatatgatattttgaccccttatcttctcaaaaagttgcgatt 5111608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 464
Target Start/End: Complemental strand, 3403286 - 3403180
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 457  Q
    |||||||||||||  |||| ||||||||||||||||||||| |  ||||||||||||||||||| | |||||| | ||||| ||  |||||| |||||||    
T  3403286 caaaagtgacccctcatgtataggaaaatatgctcttttgaccccctaacataagggaaatatgatcttttgatcccttatgttctcaaaaacttgcgat 3403187  T
Q  458 tatgacc 464  Q
    |||||||    
T  3403186 tatgacc 3403180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 460
Target Start/End: Complemental strand, 9157357 - 9157183
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttagg 382  Q
    |||| ||||||||||| |  |||||| || |||||||||||||||||| |||||||  ||| ||||       | ||||||||||||    |||||||||    
T  9157357 atttctaggctaaactgcatttttcgtcccctaaatttcaaaatgttgtgattttgatccc-tattaaaaaaatggcaaaagtgaccaa--atgtttagg 9157261  T
Q  383 aaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattat 460  Q
    ||||||||||||||||| |  |||||||||| |||||||| | |||||||| ||||||||  |||||||||||||||||    
T  9157260 aaaatatgctcttttga-cccctaacataagtgaaatatgatcttttgaccacttatcttctcaaaaagttgcgattat 9157183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 465
Target Start/End: Original strand, 23439662 - 23439770
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 456  Q
    ||||||||||| ||| ||||||| | ||||||| | ||||||   |||||| ||||||||||||||| |||||| | |||||||||  ||||||||||||    
T  23439662 gcaaaagtgactccccatgtttaaggaaatatgatattttgactctctaacttaagggaaatatgctcttttgatcccttatcttttaaaaaagttgcga 23439761  T
Q  457 ttatgaccc 465  Q
    |||||||||    
T  23439762 ttatgaccc 23439770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 39440328 - 39440248
Alignment:
Q  386 atatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||| |||||||| || ||||||||||||||||||| | |||||| | ||||||||| ||||||||||||||||||||||    
T  39440328 atatgatcttttgacctcctaacataagggaaatatgatcttttgatcccttatcttttcaaaaagttgcgattatgaccc 39440248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 432
Target Start/End: Complemental strand, 6798133 - 6798075
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacc 432  Q
    ||||||||| |||||||||||||||| | |||||||||||||||||||| |||||||||    
T  6798133 atgtttagggaaatatgctcttttgaccctctaacataagggaaatatgatttttgacc 6798075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 462
Target Start/End: Original strand, 3769489 - 3769578
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttac-aaaaagttgcgattatga 462  Q
    ||||||||  ||||||||| |||||| |   ||||||| | |||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  3769489 atgtttagagaaatatgcttttttgaccccttaacatatgagaaatatgctttttgatctcttatctttacaaaaaagttgcgattatga 3769578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 461
Target Start/End: Original strand, 24464646 - 24464748
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 456  Q
    |||| |||||||||  ||||||||| ||||||| |||||||| |  ||||||||||||||||||| | |||||||| ||||||||  ||||| |||||||    
T  24464646 gcaagagtgacccc--atgtttagggaaatatgttcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaatgttgcga 24464743  T
Q  457 ttatg 461  Q
    |||||    
T  24464744 ttatg 24464748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 461
Target Start/End: Original strand, 26126339 - 26126426
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||| ||||||||| |||||| |  ||||||||||||||||||| | |||||||| ||||||||  ||||||||||||||||||    
T  26126339 atgtttagggaaatatgcttttttgaccc-ctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatg 26126426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 461
Target Start/End: Original strand, 4193621 - 4193722
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||||||||| |  ||||||| |||||||||||||||| | | ||||||||| |||||||| | |||||||| ||||||||| ||||||||||| ||    
T  4193621 caaaagtgacccc-tgcgtttagggaaatatgctcttttgaccct-taacataagagaaatatgatcttttgaccccttatcttttcaaaaagttgcaat 4193718  T
Q  458 tatg 461  Q
    ||||    
T  4193719 tatg 4193722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 8527099 - 8527040
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||| | | |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  8527099 aggctaaagtgcacttttcgccccctatatttcaaaatgttgcgattttggccccctatt 8527040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 465
Target Start/End: Original strand, 25002712 - 25002883
Alignment:
Q  291 gctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatg 390  Q
    |||||||| | |||||||  | |||| ||||||||||||| |||||||||||| ||||       | |||||| |||||||  ||||||||| ||| |||    
T  25002712 gctaaactgcacttttcgtgccctaagtttcaaaatgttgtgattttggcccc-tattaaataaatggcaaaaatgacccc--atgtttagggaaacatg 25002808  T
Q  391 ctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||| |  ||||||||| ||||||||| | |||||||| ||||||||  || ||| |||||||||||||||    
T  25002809 ctcttttgaccc-ctaacataaaggaaatatgatcttttgaccccttatcttctcataaatttgcgattatgaccc 25002883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 458
Target Start/End: Complemental strand, 4571577 - 4571478
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 456  Q
    |||||||||||||   ||||||||| |||||||||||||| | |   |||||||||||||||||| | |||||||| ||||||||  |||||||||||||    
T  4571577 gcaaaagtgaccca--atgtttagggaaatatgctctttttaccccataacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcga 4571480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 464
Target Start/End: Original strand, 23473060 - 23473165
Alignment:
Q  360 aaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgatt 458  Q
    ||||||||| ||| ||||||| | |||| || | |||||| | |||||| ||||||||||||||| |||||   |||||||||| |||||||||| ||||    
T  23473060 aaaagtgactccccatgtttaaggaaatgtgttattttgaccctctaacttaagggaaatatgctcttttggtatcttatcttttcaaaaagttgtgatt 23473159  T
Q  459 atgacc 464  Q
    ||||||    
T  23473160 atgacc 23473165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 465
Target Start/End: Original strand, 43251349 - 43251441
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||||||||||| | ||||||||| | |||||||||||||||||||| | |||||||   |||||||  ||||||||| |||||| |||||    
T  43251349 atgtttaggaaaatgtactcttttgaccctctaacataagggaaatatgatcttttgactctttatcttctcaaaaagttacgattaagaccc 43251441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 348
Target Start/End: Complemental strand, 31494223 - 31494156
Alignment:
Q  281 ttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||| | ||||||||| |  ||||||| |||||  |||||||||||||||||||||||||||||||    
T  31494223 ttatttattggctaaactgcatttttcgcactctatgtttcaaaatgttgcgattttggccccctatt 31494156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 465
Target Start/End: Complemental strand, 9822289 - 9822227
Alignment:
Q  404 ctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||||||||| | | |||||||| ||||||||  ||||||||||||||||||||||    
T  9822289 ctaacataagggaaatacgatcttttgaccccttatcttctcaaaaagttgcgattatgaccc 9822227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 465
Target Start/End: Complemental strand, 10724214 - 10724152
Alignment:
Q  404 ctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||||||||| | | |||||||| ||||||||  ||||||||||||||||||||||    
T  10724214 ctaacataagggaaatacgatcttttgaccccttatcttctcaaaaagttgcgattatgaccc 10724152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 449
Target Start/End: Complemental strand, 24448253 - 24448187
Alignment:
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgctttt-tgacctcttatctttacaaaaa 449  Q
    ||||||||| |||||| |  ||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  24448253 aaatatgcttttttgaccccctaacataagggaaatatgtttttatgaccccttatctttacaaaaa 24448187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 26385569 - 26385507
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||| |||||| | ||||  |||| |||| |||||||||||||||||||||||||||||||    
T  26385569 tttaggataaactgcactttctgccccctaagtttcaaaatgttgcgattttggccccctatt 26385507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 339
Target Start/End: Original strand, 33237411 - 33237465
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttgg 339  Q
    ||||||||||||||   |||||| |||||||||||| ||||||||||||||||||    
T  33237411 ttttaggctaaactgtacttttcaccctctaaattttaaaatgttgcgattttgg 33237465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 348
Target Start/End: Original strand, 13577789 - 13577845
Alignment:
Q  292 ctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||| | ||| |||| |||||  |||||||||||||||||||||||||||||||    
T  13577789 ctaaactgcacttctcgctctctatgtttcaaaatgttgcgattttggccccctatt 13577845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 48175957 - 48176021
Alignment:
Q  285 ttttaggctaaacttccctttt-cgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||| | ||||| ||||| |||  ||||| |||||||||||||||||||||||||    
T  48175957 ttttaggctaaactgcactttttcgccccctatgtttcataatgttgcgattttggccccctatt 48176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 5087118 - 5087169
Alignment:
Q  412 agggaaatatgcttttt-gacctcttatctttacaaaaagttgcgattatga 462  Q
    ||||||||||| ||||| |||| ||||||||| |||||||||||||||||||    
T  5087118 agggaaatatgattttttgaccccttatcttttcaaaaagttgcgattatga 5087169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 11843177 - 11843236
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | ||| |||||| |||  ||||||||||||||||||||||| |||||||    
T  11843177 aggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggctccctatt 11843236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 15681727 - 15681802
Alignment:
Q  387 tatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||| |||||||| |  |||||||||||||| |||| | |||||||| ||||||||  ||||||||||||||||||    
T  15681727 tatgatcttttgaccccctaacataagggaactatgatcttttgaccccttatcttgtcaaaaagttgcgattatg 15681802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 20636923 - 20636864
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||| | | |||||||||| |||  ||||||||||||||||||||| |||||||||    
T  20636923 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctatt 20636864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 24597512 - 24597575
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| | | |||||||||  |||  ||||||||||||| |||||||||||||||||    
T  24597512 ttttaggctaaagtgcacttttcgcctcctatgtttcaaaatgttgtgattttggccccctatt 24597575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 27869195 - 27869254
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||| | | |||||||||| |||  ||||||||||||||||||||| |||||||||    
T  27869195 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctatt 27869254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 348
Target Start/End: Original strand, 3562461 - 3562491
Alignment:
Q  318 tttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||||||||||||||||||||    
T  3562461 tttcaaaatgttgcgattttggccccctatt 3562491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 461
Target Start/End: Original strand, 6650632 - 6650682
Alignment:
Q  412 agggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| |||||||| ||||||||  ||||||||||||||||||    
T  6650632 agggaaatatgctcttttgaccccttatcttctcaaaaagttgcgattatg 6650682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 19919616 - 19919662
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| ||| |||| |||||||||||||||||||||| ||||    
T  19919616 cttttcgccccctatattttaaaatgttgcgattttggccccttatt 19919662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 460
Target Start/End: Original strand, 29051704 - 29051789
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattat 460  Q
    |||||||| ||||||||||| ||||| |   ||| ||||| |||| ||| ||||||||| ||||||||  |||||||||||||||||    
T  29051704 atgtttagaaaaatatgctcctttgaccca-taatataagagaaaaatgatttttgaccccttatcttctcaaaaagttgcgattat 29051789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 399
Target Start/End: Original strand, 5348139 - 5348168
Alignment:
Q  370 ccctatgtttaggaaaatatgctcttttga 399  Q
    ||||||||||||||||||||||||||||||    
T  5348139 ccctatgtttaggaaaatatgctcttttga 5348168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 19493607 - 19493562
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| ||| ||| ||||||||||||||||| |||||||||    
T  19493607 ttttcgccctttaagttttaaaatgttgcgattttgaccccctatt 19493562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 465
Target Start/End: Complemental strand, 23461246 - 23461149
Alignment:
Q  369 cccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||| ||||||| | ||||||| | |||||| | |||||| |||| ||||||| || |||||| |  ||||| || ||||||||||||||||||||||    
T  23461246 cccccatgtttaaggaaatatgttattttgaccctctaacttaagagaaatattctcttttgatcctttatcatttcaaaaagttgcgattatgaccc 23461149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 24448038 - 24448103
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||| ||||||||||| | |||||||||| | || ||| |||||||||||||||||  ||||||||    
T  24448038 atttataggctaaactgcacttttcgccccccaagttttaaaatgttgcgattttgatcccctatt 24448103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 461
Target Start/End: Complemental strand, 6798082 - 6798014
Alignment:
Q  394 ttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||| | |||||||||||| ||||||| | |||||||| ||||||||   |||||||||||||||||    
T  6798082 ttttgaccctctaacataaggaaaatatgatcttttgaccccttatcttctaaaaaagttgcgattatg 6798014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 10023784 - 10023844
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||| |||||| | |||||||||| ||| |||| |||||||||||| |||| |||||||||    
T  10023784 taggttaaactgcacttttcgccccctatattttaaaatgttgcgagtttgaccccctatt 10023844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 422
Target Start/End: Original strand, 15681682 - 15681730
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg 422  Q
    ||||||||| |||||||||||||||| |  |||||||||||||| ||||    
T  15681682 atgtttagggaaatatgctcttttgaccccctaacataagggaactatg 15681730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 15681934 - 15681878
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccccta 346  Q
    ||||||||| | ||||| | || |||| |||||||||||||||||||||||| ||||    
T  15681934 ggctaaactgcacttttagacccctaagtttcaaaatgttgcgattttggcctccta 15681878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 346
Target Start/End: Complemental strand, 42438078 - 42438034
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggcccccta 346  Q
    ||||| |||||||| ||||||| | ||||||||||||||||||||    
T  42438078 cttttggccctctatatttcaagaagttgcgattttggcccccta 42438034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 3e-61; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 289 - 461
Target Start/End: Complemental strand, 48907596 - 48907424
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 388  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||| |||||    
T  48907596 aggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaatggcaaaagtgaccccctatgtttagggaaata 48907497  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  48907496 tgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttaaaaaaagttgcgattatg 48907424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 287 - 461
Target Start/End: Complemental strand, 26628332 - 26628157
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaa 385  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| ||    
T  26628332 ttaggctaaacttcatttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaa 26628233  T
Q  386 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26628232 atatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 26628157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 288 - 461
Target Start/End: Complemental strand, 27853057 - 27852883
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaa 386  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||        | ||||||||||||||||||||||||| |||    
T  27853057 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaa 27852958  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27852957 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 27852883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 288 - 461
Target Start/End: Original strand, 25179576 - 25179750
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaa 386  Q
    ||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||||| |||    
T  25179576 taggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttggccccctattaaaaaaaatagcaaaagtgaccccctatgtttagggaaa 25179675  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| || ||||| |||| |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  25179676 tatgctcttttgacctcctaacgtaagagaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 25179750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 285 - 461
Target Start/End: Complemental strand, 3329122 - 3328945
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttagga 383  Q
    |||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||        | | ||||||||||||||| |||||||     
T  3329122 tttttggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggaaaaagtgaccccctaagtttaggg 3329023  T
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  3329022 aaatatgctcttttgacctcctaacataagggaaatatgccttttgaccccttatctttacaaaaagttgcgattatg 3328945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 290 - 461
Target Start/End: Original strand, 13080894 - 13081066
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||        | |||||||||||||||||| |||||| |||||    
T  13080894 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagtgaccccctatatttagggaaata 13080993  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13080994 tgctcttttgacctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 13081066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 286 - 460
Target Start/End: Original strand, 4521950 - 4522125
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaa 384  Q
    |||||| |||||||| ||||||||||| ||| ||| |||||||||||||||||||||||||||        |||||||||||||||| |||||||||| |    
T  4521950 tttaggttaaacttcacttttcgccctataagttttaaaatgttgcgattttggccccctattaaaaaaagtagcaaaagtgaccccatatgtttaggga 4522049  T
Q  385 aatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattat 460  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4522050 aatatgctcttttgacctcttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattat 4522125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 290 - 461
Target Start/End: Complemental strand, 22500898 - 22500727
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatat 389  Q
    ||||||||||| |||||| |||| ||||||| |||||||||| |||||| |||||||||       | ||||||||||||||||||||||||||||||||    
T  22500898 ggctaaacttcacttttcaccctttaaattttaaaatgttgcaattttgaccccctattaaaaaaatggcaaaagtgaccccctatgtttaggaaaatat 22500799  T
Q  390 gctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||| || ||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  22500798 gctcttttgacctcctaacataagggaaatatgctttttgatcccttatatttacaaaaagttgcgattatg 22500727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 289 - 461
Target Start/End: Original strand, 8542609 - 8542782
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||| ||||||| ||||||| |||||||||||||| |||||| |||||||||        | ||||||||||||||||||||||||| ||||    
T  8542609 aggctaaacttcacttttcgtcctctaagtttcaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 8542708  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  8542709 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatg 8542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 290 - 461
Target Start/End: Complemental strand, 8339244 - 8339072
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||        | |||||||||||||| |||||||||| |||||    
T  8339244 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccttatgtttagggaaata 8339145  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||| |||||| || |||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  8339144 tgcttttttgacctcctaacataatagaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 8339072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 293 - 465
Target Start/End: Complemental strand, 23428920 - 23428747
Alignment:
Q  293 taaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaatatgc 391  Q
    ||||||||  ||||||||| |||| |||||||||||| | ||||||||||||||||        | ||||||||||||||||||||||||| ||||||||    
T  23428920 taaacttcatttttcgccccctaagtttcaaaatgttacaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgc 23428821  T
Q  392 tcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  23428820 tcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 23428747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 287 - 461
Target Start/End: Complemental strand, 30155450 - 30155277
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 386  Q
    |||||||||||||   |||||||||||||| ||| |||||||||||||||||  ||||||||       | |||||||||| |||||||||||||| |||    
T  30155450 ttaggctaaactttatttttcgccctctaagttttaaaatgttgcgattttgatcccctattaaaaaa-tggcaaaagtgatcccctatgtttagggaaa 30155352  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  30155351 tatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 30155277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 289 - 465
Target Start/End: Original strand, 10743408 - 10743583
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 388  Q
    |||||||||| | |||||||||| |||| ||| |||||||||||||||||||||||||||       |  |||||||||| ||||||||||||| |||||    
T  10743408 aggctaaactcctcttttcgccccctaagttttaaaatgttgcgattttggccccctattaaaaaaatgacaaaagtgactccctatgtttagggaaata 10743507  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||| | |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  10743508 tgctcttttaaccc-ctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 10743583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 286 - 461
Target Start/End: Complemental strand, 22448052 - 22447872
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaa 384  Q
    |||||| |||||| | ||||||||||||||| ||| |||||||||| ||||||||||||||||        | |||||||||||| |||||||||||| |    
T  22448052 tttaggttaaactgcacttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaatatggcaaaagtgacctcctatgtttaggga 22447953  T
Q  385 aatatgctcttttgagcttctaacataagggaaatatgctttttgacctct----tatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||| ||    ||||||||||||||||||||||||||    
T  22447952 aatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatatatctttacaaaaagttgcgattatg 22447872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 28174005 - 28173857
Alignment:
Q  318 tttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataaggga 416  Q
    |||||||||||||||||||||||||||||||        | |||||| ||| || ||||||||||| |||||||||||||||| |  |||||||||||||    
T  28174005 tttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaaatgatcctctatgtttagggaaatatgctcttttgaccccctaacataaggga 28173906  T
Q  417 aatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  28173905 aatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 28173857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 302 - 465
Target Start/End: Complemental strand, 25022952 - 25022791
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagc 401  Q
    |||||||||| |||| |||||||||||| ||||||||||||  ||||       | ||||||||||||||||||||||||| |||||||||||||||| |    
T  25022952 cttttcgcccactaagtttcaaaatgttacgattttggccctttattaaaaa--tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacc 25022855  T
Q  402 ttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
       |||||||||||| ||||| ||||||| | ||||||||||||||||||||||||||||||||    
T  25022854 ccataacataagggatatatgttttttgaacccttatctttacaaaaagttgcgattatgaccc 25022791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 28155107 - 28155014
Alignment:
Q  368 ccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||| |||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28155107 ccccatatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 28155014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 360 - 462
Target Start/End: Original strand, 48860773 - 48860875
Alignment:
Q  360 aaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgatta 459  Q
    |||| ||||||| |||||||||| ||||||||| |||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  48860773 aaaaatgaccccttatgtttagggaaatatgctattttgaccttctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgatta 48860872  T
Q  460 tga 462  Q
    |||    
T  48860873 tga 48860875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 302 - 465
Target Start/End: Complemental strand, 46673338 - 46673175
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagc 401  Q
    ||||||||||  ||| |||  |||||||||||||||| |||||||||       | |||||||||| |||||||||||||| ||||||||||||||||      
T  46673338 cttttcgccccttaagttttcaaatgttgcgattttgaccccctattaaaaaaatggcaaaagtgatcccctatgtttagggaaatatgctcttttgact 46673239  T
Q  402 ttctaacataagggaaatatgctttttgacctcttatctttac-aaaaagttgcgattatgaccc 465  Q
      ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||    
T  46673238 ccctaacataagggaaatatg-tttttgaccccttatctttacaaaaaagttgcgattatgaccc 46673175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 313 - 465
Target Start/End: Original strand, 3780906 - 3781054
Alignment:
Q  313 ctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataa 412  Q
    |||| ||||||||||||||||||||| |||| ||||       | ||||||||||||||  ||||||||| |||||||||||||||| |  |||||||||    
T  3780906 ctaagtttcaaaatgttgcgattttgacccc-tattaaaaaaatggcaaaagtgacccc--atgtttagggaaatatgctcttttgaccc-ctaacataa 3781001  T
Q  413 gggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||||||||||||  |||||||||||||||||||||| ||||||||    
T  3781002 gggaaatatgctttttgaccctttatctttacaaaaagttgcgaatatgaccc 3781054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 286 - 461
Target Start/End: Complemental strand, 26633663 - 26633491
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaa 385  Q
    ||||||||||||  | |||||| ||| |||| |||| |||||||||||||||| |||||||||       | |||||| |||||||  || |||||| ||    
T  26633663 tttaggctaaacggcacttttcaccccctaagtttctaaatgttgcgattttgaccccctattaaaaaaatggcaaaaatgacccc--atctttagggaa 26633566  T
Q  386 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||||| |  |||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  26633565 atatgctcttttgaccc-ctaacataagagaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 26633491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 358 - 465
Target Start/End: Original strand, 22416401 - 22416510
Alignment:
Q  358 gcaaaagtgacccccta-tgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcg 455  Q
    ||||||||||||||| | |||||||| | |||||||||||||| |||||||||||||| ||||||||| ||||||||  ||||||||||||||||||||     
T  22416401 gcaaaagtgaccccccaatgtttagggatatatgctcttttgaccttctaacataaggtaaatatgctcttttgacccattatctttacaaaaagttgca 22416500  T
Q  456 attatgaccc 465  Q
    ||||||||||    
T  22416501 attatgaccc 22416510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 26127139 - 26127038
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||||||||||  ||||||||| ||||||| | |||||| | ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||    
T  26127139 gcaaaagtgacccc--atgtttagggaaatatgttattttgaccctctaacataggggaaatatgctttttggccccttatctttacaaaaagttgcgat 26127042  T
Q  458 tatg 461  Q
    ||||    
T  26127041 tatg 26127038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 465
Target Start/End: Complemental strand, 33279876 - 33279713
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaatatgctcttttgag 400  Q
    |||||||||| |||| ||| ||||||||||||||||| |||||||||        | ||||||||| ||| || |||||||||||||||||||||||||     
T  33279876 cttttcgccccctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtggccctct-tgtttaggaaaatatgctcttttgac 33279778  T
Q  401 cttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |  ||||||||||||||||||||| |||||| | ||||| ||||| ||||||| ||||||||||||    
T  33279777 cccctaacataagggaaatatgctcttttgatcccttatatttac-aaaagttacgattatgaccc 33279713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 358 - 465
Target Start/End: Complemental strand, 9496450 - 9496344
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttaca-aaaagttgcga 456  Q
    |||||||||||| |  ||||||||| |||||||||||||||| | |||||||||| |||||||||||||||| || |||||||||||| |||||||||||    
T  9496450 gcaaaagtgaccac--atgtttagggaaatatgctcttttgaccctctaacataaaggaaatatgctttttgtccccttatctttacaaaaaagttgcga 9496353  T
Q  457 ttatgaccc 465  Q
      |||||||    
T  9496352 ggatgaccc 9496344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 34878754 - 34878661
Alignment:
Q  368 ccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||| ||||||| |||||||||||||||| |  |||| |||||||||||||||||||||| | ||||||||||||||||||| | ||||||    
T  34878754 ccccctaagtttagggaaatatgctcttttgaccccctaatataagggaaatatgctttttgatcccttatctttacaaaaagtttcaattatg 34878661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 284 - 461
Target Start/End: Complemental strand, 40836488 - 40836310
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnta--gcaaaagtgaccccctatgtttag 381  Q
    ||||||||||||||| |  ||||||||| |||| ||| ||||||||||||||||| |||||||||        |  ||||||||||||||  ||||||||    
T  40836488 tttttaggctaaactgcatttttcgccccctaagttttaaaatgttgcgattttgaccccctattaaaaaaaaatggcaaaagtgacccc--atgtttag 40836391  T
Q  382 gaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatct-ttacaaaaagttgcgattatg 461  Q
    | ||||||| |||||||| |  |||| |||||||||||||| ||||||||| ||||| | | | |||||||||||||||||    
T  40836390 ggaaatatgttcttttgaccccctaatataagggaaatatgttttttgaccccttatatctcaaaaaaagttgcgattatg 40836310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 26177189 - 26177088
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||||||||||  ||||| ||| ||||||||| |||||| | ||||||||| ||||||||||||||||| |   |||||||||||||||||||||||    
T  26177189 gcaaaagtgacccc--atgttcagggaaatatgctattttgaccctctaacataggggaaatatgctttttggctcattatctttacaaaaagttgcgat 26177092  T
Q  458 tatg 461  Q
    ||||    
T  26177091 tatg 26177088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 358 - 422
Target Start/End: Original strand, 20001778 - 20001842
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg 422  Q
    ||||||||||||||||||||||||| |||||||||||||||| |  |||||||||||||||||||    
T  20001778 gcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatg 20001842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 290 - 460
Target Start/End: Original strand, 25336358 - 25336527
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatat 389  Q
    ||||||||| | ||||||||||  |||||||||||||||||| ||||||||| | ||||       |  ||||||||| ||  ||| |||||| || |||    
T  25336358 ggctaaactgcacttttcgccccttaaatttcaaaatgttgcaattttggcctcttattaaaaaaatgacaaaagtgaacc--tatatttagggaattat 25336455  T
Q  390 gctcttttgagcttctaacataagggaaatatg-ctttttgacctcttatctttacaaaaagttgcgattat 460  Q
    |||||||||| |  ||||||||||||||||||| | ||||||||| ||| |||  |||||||||||||||||    
T  25336456 gctcttttgaccccctaacataagggaaatatgaccttttgaccttttaacttctcaaaaagttgcgattat 25336527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 412 - 465
Target Start/End: Original strand, 6927593 - 6927646
Alignment:
Q  412 agggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  6927593 agggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 6927646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 412 - 461
Target Start/End: Complemental strand, 32960823 - 32960774
Alignment:
Q  412 agggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32960823 agggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 32960774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 470
Target Start/End: Original strand, 36311148 - 36311332
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnta--gcaaaagtgaccccctatgtttagga 383  Q
    ||||||||||||| | ||||||| || |||| ||| |||||||||||||||||||||| ||||        |  |||||||||||||| |||  ||||||    
T  36311148 tttaggctaaactgcacttttcgtcccctaagttttaaaatgttgcgattttggcccc-tattaaaaaaaaatggcaaaagtgaccccatat--ttagga 36311244  T
Q  384 aaatatgctcttttgagcttctaacataagggaaatatg-ctttttgacctcttatctttacaaaaagttgcgattatgacccatatt 470  Q
    |||||| ||||||||| |   |||||||||||||||||| | |||| ||| ||||||||  |||| ||||||||||| | ||||||||    
T  36311245 aaatatactcttttgaccccataacataagggaaatatgacattttaaccccttatcttctcaaatagttgcgattacggcccatatt 36311332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 32960914 - 32960811
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt-nnnnnnntagcaaaagtgaccccctatgtttaggaa 384  Q
    ||||||||||||||| |||||||||    || |||||||||||||||||||||| ||||||||        | ||||||||||||||||||||||||| |    
T  32960914 tttaggctaaacttcacttttcgcc----aagtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaaaagtgaccccctatgtttaggga 32960819  T
Q  385 aatatgct 392  Q
    ||||||||    
T  32960818 aatatgct 32960811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 461
Target Start/End: Original strand, 4775852 - 4776023
Alignment:
Q  292 ctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctat--tnnnnnnntagcaaaagtgaccccctatgtttaggaaaatat 389  Q
    ||||||| | |||||| |||||||| |||||||||||||| |||||||||||||||          | ||||||||||||||| ||||||||| ||||||    
T  4775852 ctaaactacacttttcaccctctaagtttcaaaatgttgcaattttggccccctataaaaaaaaattggcaaaagtgaccccc-atgtttagggaaatat 4775950  T
Q  390 gctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||| |||||| |  || ||||| |||||||||| |  ||||| | ||||||||   |||||||||||||||||    
T  4775951 gctattttgaccccctcacatacgggaaatatgatcctttgatcccttatcttcttaaaaagttgcgattatg 4776023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 460
Target Start/End: Original strand, 33104965 - 33105112
Alignment:
Q  313 ctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataa 412  Q
    |||||||| |||||||||||||||||  ||||| ||       | || |||||||||||| ||||||||| |||||||||||||||| | |||| |||||    
T  33104965 ctaaattttaaaatgttgcgattttgatcccctgttaaaaaaatggctaaagtgaccccccatgtttagggaaatatgctcttttgatc-tctatcataa 33105063  T
Q  413 gggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattat 460  Q
    | |||||||| | |||||| | ||| ||||  ||||||||| |||||||    
T  33105064 gagaaatatgttattttgatcccttttcttcccaaaaagtttcgattat 33105112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 34878524 - 34878587
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||| | ||| |||||| |||  |||||||||||||||||||||||||||||||    
T  34878524 ttttaggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggccccctatt 34878587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 412 - 465
Target Start/End: Original strand, 3821004 - 3821058
Alignment:
Q  412 agggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  3821004 agggaaatatgctcttttgaccctttatctttacaaaaagttgcgattatgaccc 3821058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 26628018 - 26628083
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||| ||||||||||| | |||||||||| |||  |||||||||||||| ||||||||||||||||    
T  26628018 atttctaggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggccccctatt 26628083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 457
Target Start/End: Original strand, 1743254 - 1743417
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 388  Q
    |||||||||| | |||||||| | |||| |||||||||||| ||||||| ||||||||||       | ||||||     |||  |||||||||||||||    
T  1743254 aggctaaactgcacttttcgcaccctaagtttcaaaatgtttcgattttagccccctattaaaaaaatggcaaaa-----ccctgatgtttaggaaaata 1743348  T
Q  389 tgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 457  Q
    | ||||||||| |  ||||||||| |||||| || | |||||||| ||||||||  ||||||||||||||    
T  1743349 tactcttttgaccccctaacataa-ggaaatgtgatcttttgaccccttatcttctcaaaaagttgcgat 1743417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 22447738 - 22447798
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | |||||||||| |||  |||||||||||||| ||||||||||||||||    
T  22447738 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggccccctatt 22447798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 20002012 - 20001954
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | |||||| ||| |||| |||||||||||||||||||||||||||||||    
T  20002012 aggctaaactgcacttttctccc-ctaagtttcaaaatgttgcgattttggccccctatt 20001954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 348
Target Start/End: Original strand, 28173720 - 28173787
Alignment:
Q  281 ttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| |||||||||| | | |||||||||| |||  ||||| |||||||||||||||||||||||||    
T  28173720 ttattattaggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggccccctatt 28173787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 348
Target Start/End: Original strand, 28154882 - 28154940
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | |||||||||| |||  |||||||||||||| ||||||||||||||||    
T  28154882 ggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggccccctatt 28154940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 1743556 - 1743495
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| | |||||||| | |||| ||| |||||||||||||||||| ||||||||    
T  1743556 ttaggctaaactgcacttttcgctccctaagttttaaaatgttgcgattttggtcccctatt 1743495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 13081201 - 13081140
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | | |||||||||  |||  |||||||||||||||||||||||||||||||    
T  13081201 ttaggctaaagtgcgcttttcgcctcctatgtttcaaaatgttgcgattttggccccctatt 13081140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 422
Target Start/End: Complemental strand, 46387808 - 46387745
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg 422  Q
    ||||||||||||||| ||||||| | ||| |||||||||||| |  |||||||||||||||||||    
T  46387808 gcaaaagtgaccccc-atgtttaaggaaacatgctcttttgatcccctaacataagggaaatatg 46387745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 3328812 - 3328871
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | |||||||||| |||  |||||||||||| | ||||||||||||||||    
T  3328812 aggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggccccctatt 3328871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 26633360 - 26633418
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | |||||||||| |||| ||| ||||||||||||||||| |||||||||    
T  26633360 aggctaaactgcacttttcgccc-ctaagttttaaaatgttgcgattttgaccccctatt 26633418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 8338952 - 8338998
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| |||  ||||||||||||||||||||| |||||||||    
T  8338952 cttttcgccccctatgtttcaaaatgttgcgattttgaccccctatt 8338998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 32960640 - 32960698
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccc 343  Q
    |||||||||||||| |  ||||||||| |||  |||||||||||||| |||||||||||    
T  32960640 ttttaggctaaactgcatttttcgccccctatgtttcaaaatgttgcaattttggcccc 32960698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 4776109 - 4776064
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||||  || |||||||||||||||||||||| ||||    
T  4776109 ttttcgccctctaagatttaaaatgttgcgattttggccccttatt 4776064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 457
Target Start/End: Complemental strand, 35201229 - 35201131
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 456  Q
    |||||| |||||||  |||||| || ||| |||||||||||| |  ||||||||| ||||||||| | |||||||| ||||||||  ||||||||| |||    
T  35201229 gcaaaaatgaccccacatgttttgggaaacatgctcttttgacc--ctaacataaaggaaatatgatattttgaccccttatcttctcaaaaagttacga 35201132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 22500594 - 22500654
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | ||||||| || |||  ||||||||| |||| ||||||||||||||||    
T  22500594 taggctaaactgcacttttcggcccctatgtttcaaaatattgcaattttggccccctatt 22500654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 25179881 - 25179821
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | | |||||||||| |||  ||||||||||||||||| |||||||| ||||    
T  25179881 taggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgatattggccccttatt 25179821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 2e-59; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 287 - 464
Target Start/End: Original strand, 24051006 - 24051183
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 386  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||| |||    
T  24051006 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaatggcaaaagtgaccccctatgtttagggaaa 24051105  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacc 464  Q
    ||||||||||||| || |||||||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||||    
T  24051106 tatgctcttttgacctcctaacataagagaaatatactttttgaccccttatatttacaaaaagttgcgattatgacc 24051183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 287 - 461
Target Start/End: Original strand, 18791355 - 18791529
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 386  Q
    |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||| |||||       | ||||||||||||||||||||||||| |||    
T  18791355 ttaggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttggccctctattaaaaaaatggcaaaagtgaccccctatgtttagggaaa 18791454  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| |  ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  18791455 tatgctcttttgaccccctaacataagggaaatatgctttttgacccctcatctttacaaaaagttgcgattatg 18791529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 289 - 465
Target Start/End: Original strand, 32451725 - 32451902
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||        | |||||||||||||||||||||||   ||||    
T  32451725 aggctaaacttcacttttcgccctctaagtttcaaaatgttgtgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttatagaaat 32451824  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32451825 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 32451902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 289 - 460
Target Start/End: Original strand, 31210793 - 31210965
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntag-caaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||| ||||||||||||||| ||| |||||||||||||||||||| ||||||         | |||||||||||||||||||||||||||||    
T  31210793 aggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttggcctcctattaaaaaaaatgacaaaagtgaccccctatgtttaggaaaat 31210892  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattat 460  Q
    |||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31210893 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattat 31210965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 290 - 461
Target Start/End: Complemental strand, 26710611 - 26710439
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||        | ||||||| ||||||||||||||||| |||||    
T  26710611 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagcgaccccctatgtttagggaaata 26710512  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||| || ||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  26710511 tgctcttttgacctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 26710439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 288 - 461
Target Start/End: Complemental strand, 4597711 - 4597537
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaa 386  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||        | |||||| |||||||||||||||||| |||    
T  4597711 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctattataaaaaatggcaaaaatgaccccctatgtttagggaaa 4597612  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  4597611 tatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcaattatg 4597537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 290 - 461
Target Start/End: Original strand, 24603361 - 24603533
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||||| ||||||| ||| ||| |||||||||||||||||||||  ||||||||        | ||||||||||||||||||||||||| |||||    
T  24603361 ggctaaacttcacttttcgtcctttaagtttcaaaatgttgcgattttgctcccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 24603460  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24603461 tgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 24603533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 304 - 461
Target Start/End: Original strand, 15298500 - 15298657
Alignment:
Q  304 tttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagctt 403  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||       | ||||||||||||||||||||||||| |||||||||||||||| ||     
T  15298500 tttcgccctctaagtttcaaaatgttgcgagtttggccccctattaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctc 15298599  T
Q  404 ctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||    
T  15298600 ctaacataaggaaaatatgttttttgatcccttatctttacaaaaagttgcgattatg 15298657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 290 - 465
Target Start/End: Original strand, 25819685 - 25819860
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    |||||||| || ||||||||||||||| ||| |||||||||| ||||||||||||||||        | |||||||||||||| |||||||||| |||||    
T  25819685 ggctaaacctcacttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgacccc-tatgtttagggaaata 25819783  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    | ||||| ||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25819784 tactcttctgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 25819860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 287 - 465
Target Start/End: Complemental strand, 22968460 - 22968283
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaa 385  Q
    |||||||||| ||| ||||||||||  ||| |||||||||||||||||||||||||| ||||        | ||||||||||||||||||||||||| ||    
T  22968460 ttaggctaaagttcacttttcgccccttaagtttcaaaatgttgcgattttggcccc-tattaaaaaaaatggcaaaagtgaccccctatgtttagggaa 22968362  T
Q  386 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  22968361 atatgctcttttgaccccctaacataagggaaatatgttttttgacc-cttatctttacaaaaagttgcgattatgaccc 22968283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 287 - 465
Target Start/End: Original strand, 23819933 - 23820110
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaa 385  Q
    |||||||||| ||| ||||||||||  ||| |||||||||||||||||||||||||| ||||        | ||||||||||||||||||||||||| ||    
T  23819933 ttaggctaaagttcacttttcgccccttaagtttcaaaatgttgcgattttggcccc-tattaaaaaaaatggcaaaagtgaccccctatgtttagggaa 23820031  T
Q  386 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  23820032 atatgctcttttgaccccctaacataagggaaatatgttttttgacc-cttatctttacaaaaagttgcgattatgaccc 23820110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 287 - 461
Target Start/End: Complemental strand, 14572483 - 14572310
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 386  Q
    |||||||||| | | ||||||||||||||| ||| ||||| |||| ||||||||||||||||       | |||||||||||||| |||||||||| |||    
T  14572483 ttaggctaaagtccacttttcgccctctaagttttaaaatattgcaattttggccccctattaaaaaaatggcaaaagtgacccc-tatgtttagggaaa 14572385  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||||  | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  14572384 tatgctcttttgacatcctaacataagggaaatatgctttttgaccccttatctttataaaaagttgcgattatg 14572310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 286 - 465
Target Start/End: Original strand, 8412754 - 8412934
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaa 384  Q
    ||||||||||| | | |||| |||||  ||| ||||||||||||||||||||||| |||||||        | ||||||| ||||||||||||||||  |    
T  8412754 tttaggctaaagtccactttccgccccttaagtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagcgaccccctatgtttagaga 8412853  T
Q  385 aatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  8412854 aatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 8412934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 302 - 465
Target Start/End: Original strand, 3118693 - 3118855
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagc 401  Q
    |||||||||  |||| |||||||||||| ||||||||  ||||||||       | ||||||||||||| ||||||||||| |||||||||||||||| |    
T  3118693 cttttcgcctcctaagtttcaaaatgttacgattttgatcccctattaaaaaa-tggcaaaagtgaccctctatgtttagggaaatatgctcttttgacc 3118791  T
Q  402 ttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
      ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  3118792 ccctaacataagggaaatatgttttttgacctcttatctttacaaaaatttgcgattatgaccc 3118855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 285 - 461
Target Start/End: Original strand, 34833920 - 34834097
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttagga 383  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||| |||     ||||||||        | |||||||||||||||||||||||||     
T  34833920 ttttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattcctcgcccctattaaaaaaaatggcaaaagtgaccccctatgtttaggg 34834019  T
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||  |||||||||||||||||| | ||||||    
T  34834020 aaatatgctcttttgacctcctaacataagggaaatatgttttttgacccgttatctttacaaaaagttacaattatg 34834097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 289 - 452
Target Start/End: Complemental strand, 32682581 - 32682419
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 388  Q
    |||||||||||| |||||| |||||||| ||| |||||||||| |||||||  | |||||       |||||||||||||||| |||||||||| |||||    
T  32682581 aggctaaacttcacttttcaccctctaagttttaaaatgttgcaattttggttctctattaaaaaaatagcaaaagtgacccc-tatgtttagggaaata 32682483  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagtt 452  Q
    ||||||||||| ||  |||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  32682482 tgctcttttgacctcataacataaaggaaatatgttttttgaccccttatctttacaaaaagtt 32682419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 35102716 - 35102623
Alignment:
Q  368 ccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  35102716 ccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatg 35102623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 290 - 422
Target Start/End: Complemental strand, 18749432 - 18749299
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||        | ||||||||||||||||||||||||| |||||    
T  18749432 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 18749333  T
Q  389 tgctcttttgagcttctaacataagggaaatatg 422  Q
    ||||||||||| ||  ||||||||||||||||||    
T  18749332 tgctcttttgacctcttaacataagggaaatatg 18749299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 359 - 465
Target Start/End: Complemental strand, 19282445 - 19282339
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgatt 458  Q
    ||||||||||||| |||||||| | ||||||||| |||||| || |||||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  19282445 caaaagtgaccccttatgtttaagtaaatatgctattttgaactcctaacataagggaaatatgcattttgaccccttatcttttcaaaaagttgcgatt 19282346  T
Q  459 atgaccc 465  Q
    |||||||    
T  19282345 atgaccc 19282339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 290 - 453
Target Start/End: Original strand, 22269410 - 22269570
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatat 389  Q
    ||||||||| | ||||||| ||||||| ||||||||| ||||||||||||||| |||||       | |||||||||||||| |||||||||| ||||||    
T  22269410 ggctaaactgcacttttcgtcctctaagtttcaaaatattgcgattttggccctctattaaaaaa-tggcaaaagtgacccc-tatgtttagggaaatat 22269507  T
Q  390 gctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttg 453  Q
    | |||||||| | | |||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  22269508 gttcttttgaccct-taacataagggaaatatgttttttgaccccttatctttacaaaaagttg 22269570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 291 - 461
Target Start/End: Complemental strand, 4013968 - 4013798
Alignment:
Q  291 gctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatg 390  Q
    |||||||| | ||||||| || |||| |||||||||||||||||||||||||||||||       |  |||||||||||||| ||||||||| |||||||    
T  4013968 gctaaactgcacttttcgtcccctaagtttcaaaatgttgcgattttggccccctattaaaaaaatgtcaaaagtgaccccc-atgtttagggaaatatg 4013870  T
Q  391 ctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||| |  |||| |||||||||||||| | |||||||| ||||||||  ||||| ||||||||||||    
T  4013869 ctcttttgaccccctaatataagggaaatatgatcttttgaccccttatcttctcaaaatgttgcgattatg 4013798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 358 - 456
Target Start/End: Original strand, 4370967 - 4371065
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 456  Q
    ||||||||||||| | ||||||||| |||||||||||||||| |  |||||||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  4370967 gcaaaagtgaccctccatgtttagggaaatatgctcttttga-cccctaacataagggaaatatgctcctttgaccccttatctttacaaaaagttgcga 4371065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 461
Target Start/End: Complemental strand, 18749305 - 18749228
Alignment:
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||| || ||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  18749305 aaatatgttcatttgacctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgtgattatg 18749228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 467
Target Start/End: Complemental strand, 16415564 - 16415456
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||||||||| |||||||||| ||||||  |||||||| |  ||||||||||||||||||| | |||||||| ||||||||   |||||||||||||    
T  16415564 caaaagtgacccc-tatgtttagggaaatatattcttttgaccgcctaacataagggaaatatgatattttgaccgcttatcttctaaaaaagttgcgat 16415466  T
Q  458 tatgacccat 467  Q
    ||| ||||||    
T  16415465 tataacccat 16415456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 470
Target Start/End: Complemental strand, 24615908 - 24615817
Alignment:
Q  378 ttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccatatt 470  Q
    ||||| |||||||||||||||| |  |||||||| | ||||||||||||||||||  || ||||||| |||||||||||||||||||| ||||    
T  24615908 ttagggaaatatgctcttttgaccc-ctaacatatgagaaatatgctttttgacccattctctttactaaaagttgcgattatgacccttatt 24615817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 467
Target Start/End: Original strand, 12427300 - 12427411
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg-ctttttgacctcttatctttac-aaaaagttgcg 455  Q
    |||||||||| |||| ||||||||| |||||||||||||||| |   |||||||| |||||||||  ||||| |||  |||||||||| |||||||||||    
T  12427300 gcaaaagtgatcccccatgtttagggaaatatgctcttttgaaccattaacataaaggaaatatgttttttttaccctttatctttacaaaaaagttgcg 12427399  T
Q  456 attatgacccat 467  Q
    ||| ||||||||    
T  12427400 attttgacccat 12427411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 465
Target Start/End: Original strand, 2636891 - 2636953
Alignment:
Q  404 ctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  2636891 ctaacataaggtaaatatgctattttgaccccttatttttacaaaaagttgcgattatgaccc 2636953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 465
Target Start/End: Original strand, 26240025 - 26240133
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttc-taacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 456  Q
    |||||||||||||  ||||||| | |||||||||||||||| |  | |||||||||||||||||| | |||||||| ||||||||   |||||||||| |    
T  26240025 caaaagtgacccctcatgtttacggaaatatgctcttttgacccccttaacataagggaaatatgatcttttgaccccttatcttctaaaaaagttgcaa 26240124  T
Q  457 ttatgaccc 465  Q
    |||||||||    
T  26240125 ttatgaccc 26240133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 9241732 - 9241824
Alignment:
Q  368 ccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||| || ||||| ||||||| |||||||| |  ||||||||||||||||||| | |||||||| ||||||||  ||||||||||||||||||    
T  9241732 ccccctttgcttagggaaatatgttcttttgacc--ctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatg 9241824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 35102768 - 35102713
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccc 344  Q
    ||||| |||||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  35102768 aggctcaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccc 35102713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 416 - 465
Target Start/End: Complemental strand, 23124898 - 23124848
Alignment:
Q  416 aaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  23124898 aaatatgctcttttgaccccttatctttacaaaaagttgcgattatgaccc 23124848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 422
Target Start/End: Complemental strand, 2059111 - 2058993
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagct 402  Q
    ||||||| | |||||||| ||||||||||||||||| |||||||||       | |||||||||||||   ||||||||| ||||||||| ||||||       
T  2059111 ttttcgctccctaaattttaaaatgttgcgattttgaccccctatt-aaaaaatggcaaaagtgacccttcatgtttagggaaatatgctattttgacac 2059013  T
Q  403 tctaacataagggaaatatg 422  Q
     |||||||||||||||||||    
T  2059012 cctaacataagggaaatatg 2058993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 347
Target Start/End: Complemental strand, 6842391 - 6842327
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctat 347  Q
    |||||||||||||| | | |||||| |||||||| |||||||| ||||| |||||||||||||||    
T  6842391 atttttaggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctat 6842327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 399
Target Start/End: Complemental strand, 23124996 - 23124883
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttagga 383  Q
    ||||||||||||| | | |||||| ||  |||||||| |||||||||||||||||| ||||||||       |   || |||||||||  ||||||||||    
T  23124996 tttttaggctaaattgcacttttcacctcctaaattttaaaatgttgcgattttggtcccctattataaaaatgaaaatagtgacccc--atgtttagga 23124899  T
Q  384 aaatatgctcttttga 399  Q
    ||||||||||||||||    
T  23124898 aaatatgctcttttga 23124883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 15298775 - 15298730
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||    
T  15298775 ttttcgccctctatgtttcaaaatgttgcgattttggccccttatt 15298730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 463
Target Start/End: Complemental strand, 12291607 - 12291547
Alignment:
Q  404 ctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgac 463  Q
    ||||||||||||||||||| | ||||||||  |||||||  ||||||||||||||||||||    
T  12291607 ctaacataagggaaatatgatcttttgaccctttatcttctcaaaaagttgcgattatgac 12291547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 461
Target Start/End: Complemental strand, 20863896 - 20863860
Alignment:
Q  425 ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||| ||||||||||||||||||||||||||||    
T  20863896 ttttgaccccttatctttacaaaaagttgcgattatg 20863860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 35102489 - 35102549
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | | |||||||||| |||  |||||||||||||||||||| ||||||||||    
T  35102489 taggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttagccccctatt 35102549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 4597417 - 4597463
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| |||  |||||||||||||||||||||| ||||||||    
T  4597417 cttttcgccccctatgtttcaaaatgttgcgattttggtcccctatt 4597463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 12291430 - 12291475
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||| || |||| |||||||||||||||||||||||||| ||||    
T  12291430 ttttcgtcccctaagtttcaaaatgttgcgattttggccccttatt 12291475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 399
Target Start/End: Complemental strand, 20863932 - 20863891
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttga 399  Q
    |||||||||||| || |||||||||||| |||||||||||||    
T  20863932 gcaaaagtgacctcccatgtttaggaaattatgctcttttga 20863891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 8821869 - 8821929
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccccta 346  Q
    ||||||||||| | | |||||| |||||||| ||||||||  |||| ||||||||||||||    
T  8821869 tttaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccccta 8821929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 461
Target Start/End: Original strand, 14195631 - 14195732
Alignment:
Q  360 aaaagtgaccccctatgtttaggaaaatatgctcttttgagct-tctaacataagggaaatatgctttttga-cctcttatctttacaaaaagttgcgat 457  Q
    ||||||||||||  ||||| ||| ||||||| ||||||   || |||||||| ||||||||||| | ||| | || ||||| ||||||||||||||||||    
T  14195631 aaaagtgacccc--atgttaagggaaatatgttctttttgactctctaacatgagggaaatatggtcttttagccccttatttttacaaaaagttgcgat 14195728  T
Q  458 tatg 461  Q
    ||||    
T  14195729 tatg 14195732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 18749095 - 18749155
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | ||||||||||  ||  ||| |||||||||| ||||||||||||||||    
T  18749095 taggctaaactgcacttttcgccccttatgttttaaaatgttgcaattttggccccctatt 18749155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 288 - 461
Target Start/End: Original strand, 24961951 - 24962125
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaa 386  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||        | ||||||||||||||||||||||||| |||    
T  24961951 taggctaaacttcacttttcgccctctaagtttcaaaatgttgtgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaa 24962050  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24962051 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 24962125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 287 - 461
Target Start/End: Complemental strand, 4059829 - 4059654
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaa 385  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||        | ||||||||||||| ||||||||||| ||    
T  4059829 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttagccccctattaaaaaaaatggcaaaagtgaccctctatgtttagggaa 4059730  T
Q  386 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||||| || ||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  4059729 atatgctcttttgacctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 4059654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 289 - 461
Target Start/End: Original strand, 3616798 - 3616971
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||        | |||||||||||| |||||||||||| ||||    
T  3616798 aggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaat 3616897  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||| ||  | |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  3616898 atgctcttttgacctcttcacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 3616971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 281 - 461
Target Start/End: Original strand, 29676070 - 29676251
Alignment:
Q  281 ttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgttt 379  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||| |||||| ||||        |||||||||||| |||||||||||    
T  29676070 ttatttataggctaaacttcacttttcgccctctaagtttcaaaatgttgcaatttaggccccatattaaaaagaatagcaaaagtgatcccctatgttt 29676169  T
Q  380 aggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||| |||||||||||| ||| || |||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||    
T  29676170 agggaaatatgctcttgtgatctcctaacataagtgaaatatgctttttgaccccttatctttataaaaagttgcgattatg 29676251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 289 - 465
Target Start/End: Complemental strand, 19078228 - 19078053
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||| || | ||||| ||||||||  |||||||||||||| ||||||||||||||||       | |||||||||||||| |||||||||| |||||    
T  19078228 aggctaagctgcactttttgccctctatgtttcaaaatgttgcaattttggccccctattaaaaaaatggcaaaagtgacccc-tatgtttagggaaata 19078130  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  19078129 tgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 19078053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 289 - 465
Target Start/End: Complemental strand, 19126118 - 19125943
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||| || | ||||| ||||||||  |||||||||||||| ||||||||||||||||       | |||||||||||||| |||||||||| |||||    
T  19126118 aggctaagctgcactttttgccctctatgtttcaaaatgttgcaattttggccccctattaaaaaaatggcaaaagtgacccc-tatgtttagggaaata 19126020  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  19126019 tgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 19125943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 302 - 467
Target Start/End: Original strand, 24749809 - 24749976
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnta--gcaaaagtgaccccctatgtttaggaaaatatgctcttttga 399  Q
    ||||||| ||||||| ||||||||||||||||||||||||| |||||        |  ||||||||||||||||||||||||| ||||||||||||||||    
T  24749809 cttttcgtcctctaagtttcaaaatgttgcgattttggcccactattaaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 24749908  T
Q  400 gcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccat 467  Q
     ||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  24749909 cctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccat 24749976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 302 - 465
Target Start/End: Complemental strand, 46432508 - 46432344
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaatatgctcttttgag 400  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| ||||||||||||||||     
T  46432508 cttttcgccccttaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttgac 46432409  T
Q  401 cttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  46432408 cccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 46432344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 288 - 461
Target Start/End: Original strand, 24196259 - 24196433
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaa 386  Q
    ||||||||||| | |||||||||| |||| ||||||||||||||||||||||||| |||||        | |||||||||||||| |||||||||  |||    
T  24196259 taggctaaactccacttttcgccccctaagtttcaaaatgttgcgattttggccctctattaaaaaaaatggcaaaagtgaccccatatgtttagagaaa 24196358  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  24196359 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgaatatg 24196433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 287 - 461
Target Start/End: Complemental strand, 28920958 - 28920789
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt-nnnnnnntagcaaaagtgaccccctatgtttaggaaa 385  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| ||    
T  28920958 ttaggctaaacttcacttttcgccccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaa 28920859  T
Q  386 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||||| || |||||||      |||||||||||||||| |||||||||||||||||| |||||||||    
T  28920858 atatgctcttttgacctcctaacat------aatatgctttttgaccccttatctttacaaaaagtggcgattatg 28920789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 290 - 465
Target Start/End: Complemental strand, 43706957 - 43706782
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||| | ||||| |||| |||| ||| |||||||||||||||||||||||||||        | ||||||||||||||||||||||||| |||||    
T  43706957 ggctaaactccactttttgccccctaatttttaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 43706858  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||| |   |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  43706857 tgctcttttgaccca-taacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 43706782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 287 - 465
Target Start/End: Complemental strand, 51719427 - 51719250
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 386  Q
    |||||||||||| | ||||| | |  |||| ||||||||||||||||||||||| |||||||       | |||||||||||||| |||||||||| |||    
T  51719427 ttaggctaaactccactttttgtcacctaagtttcaaaatgttgcgattttggctccctattaaaaaaatggcaaaagtgaccccttatgtttagggaaa 51719328  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||||| |  ||||||||||| ||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  51719327 tatgctcttttgatcccctaacataaggaaaatatg-ttttttaccccttatctttacaaaaagttgcgattatgaccc 51719250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 290 - 461
Target Start/End: Complemental strand, 48472165 - 48471995
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    |||||||| || ||||||||||||||| ||||||||| |||| ||||| ||||  ||||        | |||||| |||||||||||||||||| |||||    
T  48472165 ggctaaacatcacttttcgccctctaagtttcaaaatattgcaattttagccc--tattaaaaaaaatggcaaaattgaccccctatgtttagggaaata 48472068  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||| || |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  48472067 tgctcttttgacctcctaacataagagaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 48471995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 290 - 472
Target Start/End: Original strand, 2425225 - 2425407
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||| | ||||| |||  |||| ||||||||||||||||||||| |||||||||        | |||||||||||||| |||||||||| || ||    
T  2425225 ggctaaactccactttttgccacctaagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgacccc-tatgtttagggaa-ta 2425322  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttg-acctcttatctttacaaaaagttgcgattatgacccatattct 472  Q
    ||||||||||| | |||||||||||||||||||| |||||  | | |||||||||||||||||||||||||||||||||| ||||    
T  2425323 tgctcttttgaccctctaacataagggaaatatgttttttttaacccttatctttacaaaaagttgcgattatgacccattttct 2425407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 465
Target Start/End: Complemental strand, 2657818 - 2657640
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaa 385  Q
    |||||||||||| | |||||||||| |||| ||||||||| ||||||||||| |||| ||||        | ||||||||||| ||||||||||||| ||    
T  2657818 ttaggctaaactacacttttcgccccctaagtttcaaaatattgcgattttgacccc-tattaaaaaaaatggcaaaagtgactccctatgtttagggaa 2657720  T
Q  386 atatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||| |||| |  ||||||||| ||||||||||| |||||||| |||||||||  ||||||||| |||||||||||    
T  2657719 atatgctctattgaccgcctaacataa-ggaaatatgctcttttgaccccttatcttttaaaaaagttgtgattatgaccc 2657640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 359 - 461
Target Start/End: Complemental strand, 4455277 - 4455174
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg-ctttttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||||| |||| |||||||||||||||||||||||||| |   ||||||||||||||||||  ||||||||| ||||||||  ||||||||||||||    
T  4455277 caaaagtgatccccaatgtttaggaaaatatgctcttttgaccccgtaacataagggaaatatgattttttgaccacttatcttctcaaaaagttgcgat 4455178  T
Q  458 tatg 461  Q
    ||||    
T  4455177 tatg 4455174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 358 - 460
Target Start/End: Original strand, 28750346 - 28750448
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataa-gggaaatatgctttttgacctcttatctttacaaaaagttgcga 456  Q
    ||||||||||||||  |||||||| ||||||||||||||||| | |||||||||| |||||| ||| |||||| |||||||||||||  |||||||||||    
T  28750346 gcaaaagtgacccctcatgtttagaaaaatatgctcttttgaccctctaacataaggggaaaaatgttttttggcctcttatcttta-taaaagttgcga 28750444  T
Q  457 ttat 460  Q
    ||||    
T  28750445 ttat 28750448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 287 - 465
Target Start/End: Complemental strand, 18606990 - 18606811
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 386  Q
    |||||||||||| | ||||||| || |||| ||| ||||||||| ||||||| |||||||||       | | ||||||||||||  ||||||||| |||    
T  18606990 ttaggctaaactacacttttcgacccctaagttttaaaatgttgtgattttgaccccctattaaaaaactggaaaaagtgacccctcatgtttagggaaa 18606891  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||||| |   |||||||||| ||||| | | |||||||| ||||||||  |||||||||| |||||| ||||    
T  18606890 tatgctcttttgaccccataacataaggaaaatacgatcttttgaccccttatcttctcaaaaagttgtgattatcaccc 18606811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 467
Target Start/End: Complemental strand, 29182234 - 29182126
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||||||||| |||||||||  |||||||||||||||| |  ||||||||||||||||||| | |||||||| ||||||||  || |||||||||||    
T  29182234 caaaagtgaccccttatgtttagagaaatatgctcttttga-cccctaacataagggaaatatgatcttttgaccccttatcttctcataaagttgcgat 29182136  T
Q  458 tatgacccat 467  Q
    |||| |||||    
T  29182135 tatggcccat 29182126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 16551879 - 16551775
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 456  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |  ||||||| ||  ||||||| | |||||||| ||||||||  |||||||||||||    
T  16551879 gcaaaagtgacccccaatgtttagggaaatatgctcttttgaccccctaacatcagacaaatatgatcttttgaccccttatcttctcaaaaagttgcga 16551780  T
Q  457 ttatg 461  Q
    |||||    
T  16551779 ttatg 16551775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 422
Target Start/End: Original strand, 21148048 - 21148111
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg 422  Q
    |||||||||||||||||||||||| |||||||||||||||| |  |||||||||||||||||||    
T  21148048 caaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatg 21148111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 461
Target Start/End: Complemental strand, 27093070 - 27092984
Alignment:
Q  375 tgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||| |||||||||||||||| |  |||| ||| | |||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  27093070 tgtttagggaaatatgctcttttgaccccctaatatatgtgaaatatgttttttgaccccttatctttacaaaaagttgcaattatg 27092984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 374 - 464
Target Start/End: Original strand, 47685186 - 47685276
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacc 464  Q
    ||||||| | ||||||||| |||||| |  ||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||| ||||||    
T  47685186 atgtttaaggaaatatgctattttgatcccctaacataaggaaaatatgttttttgaccccttacctttacaaaaagttgcgataatgacc 47685276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 404 - 465
Target Start/End: Complemental strand, 31084801 - 31084740
Alignment:
Q  404 ctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||||| || ||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  31084801 ctaacatatggaaaatatgctttttgaccccttatctttacaaaaagtttcgattatgaccc 31084740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 453
Target Start/End: Original strand, 22786099 - 22786194
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttg 453  Q
    |||||||||| |||| ||||||||| |||||||||||||||| | ||||||||||| |||||||| | |||||||| ||||||||  ||||||||||    
T  22786099 gcaaaagtgagcccccatgtttagggaaatatgctcttttga-catctaacataagtgaaatatgatcttttgaccccttatcttctcaaaaagttg 22786194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 16551656 - 16551702
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  16551656 cttttcgccctctaagtttcaaaatgttgcaattttggccccctatt 16551702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 51719119 - 51719181
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||| | ||||||||||||||  ||||| |||||||| ||||||||||||||||    
T  51719119 tttaggctaaactgcacttttcgccctctatgtttcataatgttgcaattttggccccctatt 51719181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 16972157 - 16972096
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| | |||||||||| |||| ||| |||||||||||||||| ||||||||||    
T  16972157 ttaggctaaactgcacttttcgccccctaagttttaaaatgttgcgattttagccccctatt 16972096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 2657507 - 2657571
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| |||| |||||| ||||||||||| ||| ||| |||||||||||||||| ||||||||||    
T  2657507 ttttttggcttaacttcacttttcgccctttaagttttaaaatgttgcgattttagccccctatt 2657571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 3617108 - 3617044
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| ||||||||||| |||||||||| |||  |||||||||||||| ||||| ||||||||||    
T  3617108 ttttttggctaaacttcacttttcgccccctatgtttcaaaatgttgcaattttcgccccctatt 3617044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 463
Target Start/End: Original strand, 9387693 - 9387868
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 387  Q
    ||||||||||| | ||||| ||| ||||| ||||||||| || ||||||| ||||| ||||       | |||||||| |||||| ||||||| | ||||    
T  9387693 taggctaaactgcactttttgccttctaagtttcaaaatattacgattttcgcccc-tattaaaaaaatggcaaaagtaaccccc-atgtttaaggaaat 9387790  T
Q  388 atgctcttttga-gcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgac 463  Q
    ||||||||||||  |  ||||||||||||||||||  | ||||||||  |||||||  |||||| |||||||||||||    
T  9387791 atgctcttttgacccccctaacataagggaaatataatcttttgaccctttatcttctcaaaaatttgcgattatgac 9387868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 285 - 348
Target Start/End: Complemental strand, 2425532 - 2425469
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||| | ||||| |||| |||  ||||| |||||||||||||||||||||||||    
T  2425532 ttttaggctaaactgcactttttgccccctatgtttcataatgttgcgattttggccccctatt 2425469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 4059521 - 4059580
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||| | | |||||||||| |||  |||||||||||||||||||||||||||||||    
T  4059521 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggccccctatt 4059580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 293 - 348
Target Start/End: Complemental strand, 21148248 - 21148193
Alignment:
Q  293 taaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||| | ||||||| || |||||||| |||||||||||||||||||||||||||    
T  21148248 taaactgcacttttcgacccctaaattttaaaatgttgcgattttggccccctatt 21148193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 28552317 - 28552363
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| |||| |||||||||||||||||||||| ||||||||    
T  28552317 cttttcgccccctaagtttcaaaatgttgcgattttggtcccctatt 28552363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 51685871 - 51685809
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctat 347  Q
    |||||||||||| | | |||||| |||||||| |||||||| |||||||||||||||| ||||    
T  51685871 ttttaggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctat 51685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 27092841 - 27092906
Alignment:
Q  278 tagttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccc 343  Q
    ||||| ||||||||||||||| | ||| |||||| |||  |||||||||||| |||||||||||||    
T  27092841 tagttttttttaggctaaactgcacttctcgccccctatgtttcaaaatgttacgattttggcccc 27092906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 348
Target Start/End: Original strand, 43706655 - 43706712
Alignment:
Q  291 gctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||| | |||||||||| |||  ||||| |||||||||||||||||||||||||    
T  43706655 gctaaactgcacttttcgccccctatgtttcataatgttgcgattttggccccctatt 43706712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 348
Target Start/End: Original strand, 50334719 - 50334776
Alignment:
Q  291 gctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||| | |||||||||| |||| ||| |||||||||| ||||||||||||||||    
T  50334719 gctaaactccacttttcgccccctaagttttaaaatgttgcaattttggccccctatt 50334776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 465
Target Start/End: Complemental strand, 2260611 - 2260506
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 457  Q
    |||||||||||||  ||||||||  ||||||||| |||||| |   ||| |||||||||||||| | |||| ||| ||||||||  ||||||||||||||    
T  2260611 caaaagtgacccc--atgtttagtgaaatatgcttttttgaccccataatataagggaaatatgatattttaaccccttatcttctcaaaaagttgcgat 2260514  T
Q  458 tatgaccc 465  Q
    | ||||||    
T  2260513 tctgaccc 2260506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 462
Target Start/End: Complemental strand, 26605494 - 26605408
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatga 462  Q
    ||||||||| ||||||||| |||||| |  ||||||||||  ||||||| |||||||  |||||| ||||||||||||| |||||||||    
T  26605494 atgtttagggaaatatgctattttgaccc-ctaacataaga-aaatatgttttttgatatcttatttttacaaaaagttacgattatga 26605408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 46432214 - 46432274
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | | |||||||||| |||  ||||| |||||||||||||||||||||||||    
T  46432214 taggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggccccctatt 46432274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 465
Target Start/End: Original strand, 21185278 - 21185380
Alignment:
Q  360 aaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgatt 458  Q
    ||||||||||||  ||||||||| ||||||| |||||||| | | |||||||||  ||||||| | |||||||| | ||||||  |||||||||||||||    
T  21185278 aaaagtgacccc--atgtttagggaaatatgttcttttgaccct-taacataaga-aaatatgatcttttgaccccctatcttctcaaaaagttgcgatt 21185373  T
Q  459 atgaccc 465  Q
    |||||||    
T  21185374 atgaccc 21185380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 24196566 - 24196507
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | |||||||||  |||  ||| |||||||||||||||||||||||||||    
T  24196566 aggctaaactgcacttttcgcctcctatgttttaaaatgttgcgattttggccccctatt 24196507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 460
Target Start/End: Original strand, 10684807 - 10684965
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagct 402  Q
    |||||||||  ||| ||| |||||||||| ||||| | ||||||||       | |||||||||||||| | |||||||| |||||| |||| |||| |     
T  10684807 ttttcgccccttaagttttaaaatgttgcaattttagtcccctattaaaaaaatggcaaaagtgaccccat-tgtttagggaaatatactctattgaccc 10684905  T
Q  403 tc-taacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattat 460  Q
     | |||||||||  ||||||| | |||||||| ||||||||  |||||||||||||||||    
T  10684906 ccctaacataagaaaaatatgatcttttgaccccttatcttctcaaaaagttgcgattat 10684965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 348
Target Start/End: Original strand, 48471891 - 48471921
Alignment:
Q  318 tttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||||||||||||||||||||    
T  48471891 tttcaaaatgttgcgattttggccccctatt 48471921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 470
Target Start/End: Original strand, 16971935 - 16972032
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg-ctttttgacctcttatctttacaaaaagttgcgattatgacccatatt 470  Q
    ||||||||| | ||||||||||| || |  ||||||||||||||||||| | |||||||   |||||||  |||||  ||||||||||||||| ||||    
T  16971935 atgtttagggatatatgctctttagaccccctaacataagggaaatatgaccttttgactctttatcttctcaaaatattgcgattatgacccctatt 16972032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 348
Target Start/End: Complemental strand, 16878987 - 16878931
Alignment:
Q  292 ctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||| | |||||||||  |||| ||||||||||||| |||||||| ||||||||    
T  16878987 ctaaactgcacttttcgccacctaagtttcaaaatgttgagattttggtcccctatt 16878931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 24962263 - 24962199
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| |||||||||   |||||||||| |||  ||||||||||||||  |||||||||||||||    
T  24962263 ttttttggctaaactgtacttttcgccccctatgtttcaaaatgttgcagttttggccccctatt 24962199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 5e-57; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 289 - 461
Target Start/End: Original strand, 11175906 - 11176079
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| ||||    
T  11175906 aggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 11176005  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  11176006 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgtgattatg 11176079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 288 - 461
Target Start/End: Complemental strand, 9051333 - 9051159
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaa 386  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||||||||||| |||||||||        | ||||||||||| ||||||||||||| |||    
T  9051333 taggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgactccctatgtttagggaaa 9051234  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9051233 tatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 9051159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 284 - 461
Target Start/End: Original strand, 38716188 - 38716365
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttagga 383  Q
    ||||||||||||||||| |||||| |||||||| ||| ||||||||||||||||| |||||||||       | |||||||||||||| ||||||||||     
T  38716188 tttttaggctaaacttcacttttcaccctctaagttttaaaatgttgcgattttgaccccctattaaaaaaatggcaaaagtgaccccatatgtttaggg 38716287  T
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||||||| || |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  38716288 aaatatgctcttttgacctcctaacataagagaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 38716365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 293 - 461
Target Start/End: Original strand, 2986689 - 2986858
Alignment:
Q  293 taaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntag-caaaagtgaccccctatgtttaggaaaatatgc 391  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||         | |||||||||||||||||||||||| ||||||||    
T  2986689 taaacttcacttttcgccctttaagtttcaaaatgttgcgattttggccccctattaaaaaaaatgacaaaagtgaccccctatgtttagggaaatatgc 2986788  T
Q  392 tcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2986789 tcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 2986858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 287 - 461
Target Start/End: Complemental strand, 18538135 - 18537960
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaa 385  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| ||    
T  18538135 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaa 18538036  T
Q  386 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||| |||||| ||  |||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  18538035 atatgcttttttgacctcataacattagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatg 18537960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 288 - 461
Target Start/End: Complemental strand, 30714580 - 30714406
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaa 386  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||        | |||||||||||||||||||||| || |||    
T  30714580 taggctaaacttcacttttcgccctctaaattttaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttcgggaaa 30714481  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| || |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  30714480 tatgctcttttgacctcctaacataagggaaatatgctttttgacccgttatctttacaaaaagttgtgattatg 30714406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 288 - 461
Target Start/End: Complemental strand, 25299106 - 25298933
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||||  |||||||||||||| |||||||||||||||||||| ||||||||||       | ||||||||||||||||||||||||| ||||    
T  25299106 taggctaaacttcaattttcgccctctaagtttcaaaatgttgcgattttagccccctattaaaaaaatggcaaaagtgaccccctatgtttagggaaat 25299007  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||| ||  |||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||||    
T  25299006 atgctcttttgacctcttaacataaaggaaatatgttttttgatcccttatctttacaaaaagttgcgattatg 25298933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 284 - 465
Target Start/End: Original strand, 4587854 - 4588037
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnta--gcaaaagtgaccccctatgtttag 381  Q
    ||||||||||||||  | |||||||||| |||| |||||||||||||||||||||||||||||||        |  ||||||||||||||||||||||||    
T  4587854 tttttaggctaaacaccacttttcgccccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaaatggcaaaagtgaccccctatgtttag 4587953  T
Q  382 gaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    | |||||||||||||||| |  ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  4587954 ggaaatatgctcttttgaccccctaacataagggaaatatgttttttaaccccttatctttacaaaaagttgcgattatgaccc 4588037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 289 - 459
Target Start/End: Complemental strand, 6764022 - 6763851
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    ||||||||||||  |||||||||||||| |||||||||||||||||||||| ||||||||        | ||||||||||||||||||||||||| ||||    
T  6764022 aggctaaacttcatttttcgccctctaagtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 6763923  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgatta 459  Q
    |||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||    
T  6763922 atgctcttttgacctcctaacataaggaaaatatgctttttgaccccttatctttacaaaaagtagcgatta 6763851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 288 - 461
Target Start/End: Original strand, 15735062 - 15735236
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaa 386  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||        | |||||||||||||||||||||| || |||    
T  15735062 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggtcccctattaaaagaaatggcaaaagtgaccccctatgttttgggaaa 15735161  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| ||  ||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||    
T  15735162 tatgctcttttgacctcgtaacataagggaaatatgtattttgaccccttatctttacaaaaagttgcgattatg 15735236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 283 - 465
Target Start/End: Original strand, 15700740 - 15700923
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttag 381  Q
    |||||||||||||| | | ||||||||||  ||| ||| |||||||||||||||||| ||||||||        | ||| |||||||||||||||||| |    
T  15700740 atttttaggctaaagtccacttttcgccccttaagttttaaaatgttgcgattttggacccctattaaaaaaaatggcacaagtgaccccctatgtttcg 15700839  T
Q  382 gaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    | |||||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  15700840 ggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 15700923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 303 - 461
Target Start/End: Original strand, 9787573 - 9787731
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagct 402  Q
    ||||||||| |||  ||| |||||||||| |||||| |||||||||       | ||||||||||||| ||||||||||| |||||||||||||||| ||    
T  9787573 ttttcgccccctatgttttaaaatgttgcaattttgaccccctattaaaaaaatggcaaaagtgacccactatgtttagggaaatatgctcttttgacct 9787672  T
Q  403 tctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
     ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  9787673 gctaacataagggaaatatgctttttgaccccttatctttacaaaaagttacgattatg 9787731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 286 - 465
Target Start/End: Original strand, 22191042 - 22191222
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaa 384  Q
    ||||||||||||| | ||||||| || |||  ||| |||||||||| |||||||||||||||         | ||||||||||||||||||||||||| |    
T  22191042 tttaggctaaactacacttttcgtcccctatgttttaaaatgttgcaattttggccccctatcaaaaaaaatggcaaaagtgaccccctatgtttaggga 22191141  T
Q  385 aatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||||||||||||  | |||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||    
T  22191142 aatatgctcttttgacttcctaacataagggaaatatgccttttgaccccttatctttacaaaaagttacgattatgaccc 22191222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 387 - 461
Target Start/End: Original strand, 17368314 - 17368388
Alignment:
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  17368314 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatg 17368388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 358 - 470
Target Start/End: Original strand, 331781 - 331894
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgc-tttttgacctcttatctttacaaaaagttgcga 456  Q
    ||||||||||||  | ||||||||| |||||||||||||||| | |||||| |||||||||||||| ||||||| |  |||||||| |||||||||||||    
T  331781 gcaaaagtgaccttccatgtttagggaaatatgctcttttgaccctctaacttaagggaaatatgcttttttgatccattatctttgcaaaaagttgcga 331880  T
Q  457 ttatgacccatatt 470  Q
    ||||||||| ||||    
T  331881 ttatgacccctatt 331894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 359 - 470
Target Start/End: Original strand, 2190605 - 2190714
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctt-tttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||||||||   ||||||||| |||||||||||||||| | |||||| ||||| |||||||||  |||| || |||||||||||||||||||||| |    
T  2190605 caaaagtgaccc---atgtttagggaaatatgctcttttgaccctctaacttaaggaaaatatgctcgtttggccccttatctttacaaaaagttgcggt 2190701  T
Q  458 tatgacccatatt 470  Q
    |||||||||||||    
T  2190702 tatgacccatatt 2190714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 465
Target Start/End: Complemental strand, 4105040 - 4104952
Alignment:
Q  377 tttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||| ||||||  |||||||| || |||||||||||| |||||||| |||||||  ||||| ||||||||||||||||||||||||||    
T  4105040 tttagggaaatatattcttttgacct-ctaacataaggggaatatgctcttttgacaccttatatttacaaaaagttgcgattatgaccc 4104952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 21494555 - 21494626
Alignment:
Q  394 ttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||| | ||||||| ||| |||||||| ||||||  |||||||||||||||||||||||| |||||||||    
T  21494555 ttttgaccctctaacagaagagaaatatgttttttgttctcttatctttacaaaaagttgcgtttatgaccc 21494626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 461
Target Start/End: Complemental strand, 22387287 - 22387200
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||  |||||||||||||||| |  |||||||| | |||||||| ||||||||| ||||||| |||||| ||||| |||||||    
T  22387287 atgtttagtgaaatatgctcttttgaccccctaacatatgagaaatatgttttttgaccccttatctatacaaagagttgtgattatg 22387200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 465
Target Start/End: Original strand, 28365581 - 28365686
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||||||||| ||| |||||| |||||||||| ||||| |  ||||||| ||||||||||| | |||| ||| ||||||||  ||||||||||||||    
T  28365581 caaaagtgacccc-tatatttagggaaatatgctcgtttgaccc-ctaacatgagggaaatatgatcttttaaccccttatcttctcaaaaagttgcgat 28365678  T
Q  458 tatgaccc 465  Q
    ||||||||    
T  28365679 tatgaccc 28365686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 465
Target Start/End: Original strand, 33199547 - 33199630
Alignment:
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaa-gttgcgattatgaccc 465  Q
    |||||||||||||||| |||||||| | ||||||||||||| ||||| ||| |||||||||||||||  |||||||| ||||||    
T  33199547 aaatatgctcttttgaccttctaactttagggaaatatgctcttttggccttttatctttacaaaaatattgcgattttgaccc 33199630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 457
Target Start/End: Original strand, 36464289 - 36464441
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagct 402  Q
    |||||||||  ||| ||| ||||||||||||||||| |||| ||||       | ||||||||||||||  ||||||||| ||||||| |||||||| |     
T  36464289 ttttcgccccttaagttttaaaatgttgcgattttgacccc-tatttaaaaaatggcaaaagtgacccc--atgtttagggaaatatgatcttttgaccc 36464385  T
Q  403 tctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 457  Q
     ||||||||||||||||||  | |||||||  ||||||||  ||||||||||||||    
T  36464386 cctaacataagggaaatataatcttttgactccttatcttctcaaaaagttgcgat 36464441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 25884174 - 25884236
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||| | | |||||||| |||| ||| |||||||||||||||||||||||||||    
T  25884174 tttaggctaaactgcacatttcgccccctaagttttaaaatgttgcgattttggccccctatt 25884236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 460
Target Start/End: Complemental strand, 25884412 - 25884310
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 456  Q
    ||||||||||||||| ||||||||  ||||||| | |||| | |  ||||||||||||||||||| | |||| ||| ||||||||  |||||||||||||    
T  25884412 gcaaaagtgaccccc-atgtttagagaaatatgttattttaatcccctaacataagggaaatatgatattttaaccccttatcttctcaaaaagttgcga 25884314  T
Q  457 ttat 460  Q
    ||||    
T  25884313 ttat 25884310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 30714270 - 30714333
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| | | |||||||||| |||  ||| |||||||||||||||||||||||||||    
T  30714270 ttttaggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttggccccctatt 30714333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 458
Target Start/End: Original strand, 1020485 - 1020559
Alignment:
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgatt 458  Q
    ||||||||| |||||| | ||||||||||| |||||||| |||||| ||  |||||||| |||||||||| ||||    
T  1020485 aaatatgctattttgaccctctaacataagagaaatatgatttttgtccctttatcttttcaaaaagttgtgatt 1020559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 2986992 - 2986932
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | | |||||| | |||||  |||||||||||||||||||||||||||||||    
T  2986992 taggctaaagtgcacttttcactctctatgtttcaaaatgttgcgattttggccccctatt 2986932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 348
Target Start/End: Complemental strand, 9787861 - 9787803
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | |||||||||| |||  ||||||||| |||| ||||||||||||||||    
T  9787861 ggctaaactacacttttcgccccctatgtttcaaaatattgcaattttggccccctatt 9787803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 399
Target Start/End: Original strand, 15147814 - 15147854
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttga 399  Q
    ||||||||||||||| ||||||||| ||||||||||||||||    
T  15147814 gcaaaagtgaccccc-atgtttagggaaatatgctcttttga 15147854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 463
Target Start/End: Original strand, 2123469 - 2123549
Alignment:
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgac 463  Q
    |||||||||||||||| | |||| | | ||||||||| | | ||||||||  |||||||||||||||||||| ||| ||||    
T  2123469 aaatatgctcttttgatcctctatctttagggaaataagttcttttgaccctttatctttacaaaaagttgcaattttgac 2123549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 461
Target Start/End: Complemental strand, 26829308 - 26829221
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||| | ||||||||||||| || |  ||||||||||||||||||| | |||||||| |||||| |  |||||||||| |||||||    
T  26829308 atgtttaaggaaatatgctctttggaccc-ctaacataagggaaatatgatcttttgaccccttatcatctcaaaaagttgtgattatg 26829221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 467
Target Start/End: Complemental strand, 28319188 - 28319132
Alignment:
Q  412 agggaaatatgctttttgacctcttatctttacaaaa-agttgcgattatgacccat 467  Q
    |||||||||||||||||     ||||||||||||||| |||||||||||||||||||    
T  28319188 agggaaatatgcttttttggtccttatctttacaaaatagttgcgattatgacccat 28319132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 285 - 465
Target Start/End: Complemental strand, 41877333 - 41877156
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaa 384  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||       | ||||||||||||||||||||||||| |    
T  41877333 ttttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggctccctattaaaaaa-tggcaaaagtgaccccctatgtttaggga 41877235  T
Q  385 aatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  41877234 aatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttac--aaagttgcgattatgaccc 41877156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 289 - 461
Target Start/End: Complemental strand, 13397980 - 13397807
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||||||||        | ||||||||||||||||||||||||| ||||    
T  13397980 aggctaaacttcacttttcgccctctaagtttcaaaatattgcaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 13397881  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13397880 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 13397807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 287 - 467
Target Start/End: Complemental strand, 5304652 - 5304473
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 386  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||| |||||       | |||||||||||||| |||||||||| |||    
T  5304652 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccctctattaaaaaaatggcaaaagtgacccc-tatgtttagggaaa 5304554  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccat 467  Q
    ||||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  5304553 tatgctcttttgacctcctaacataaggaaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccat 5304473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 290 - 461
Target Start/End: Original strand, 4357252 - 4357424
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||| || |||||||        | ||||||||||| |||||| |||||| |||||    
T  4357252 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttagctccctattaaaaaaaatggcaaaagtgacaccctatatttagggaaata 4357351  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4357352 tgctcttttgaccttctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 4357424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 281 - 465
Target Start/End: Complemental strand, 9195975 - 9195792
Alignment:
Q  281 ttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgttta 380  Q
    ||||| |||||||||||  | |||||||||| ||||||||||||||||||||||||||| ||||||||       |  ||||||||||||||||||||||    
T  9195975 ttattcttaggctaaacaccacttttcgccccctaaatttcaaaatgttgcgattttggtcccctattaaaaaaatgacaaaagtgaccccctatgttta 9195876  T
Q  381 ggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    || |||||||||||||||| |   |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  9195875 gggaaatatgctcttttgaccca-taacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 9195792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 288 - 465
Target Start/End: Complemental strand, 43793936 - 43793759
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 387  Q
    ||||||||||| | ||||| |||  |||| |||||||||||||||||||||||||||||||       | |||||||||||||| |||||||||| ||||    
T  43793936 taggctaaactccactttttgccgcctaagtttcaaaatgttgcgattttggccccctattaaaaaaatggcaaaagtgaccccatatgtttagggaaat 43793837  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||||||||| || ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||||||    
T  43793836 atgctcttttgacctcctaacataagggaaatatgttttttgaccccttatatttacaaaaagttgcgaatatgaccc 43793759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 285 - 465
Target Start/End: Original strand, 35475286 - 35475465
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttagga 383  Q
    ||||||||||||||||  |||||||||||||| ||| ||||||||||||||||||| |||||||        | |||||||||||||  ||||||||||     
T  35475286 ttttaggctaaacttcatttttcgccctctaagttttaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagtgaccc--tatgtttaggg 35475383  T
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  35475384 aaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagtagcgattatgaccc 35475465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 358 - 460
Target Start/End: Complemental strand, 15059053 - 15058951
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15059053 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 15058954  T
Q  458 tat 460  Q
    |||    
T  15058953 tat 15058951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 290 - 461
Target Start/End: Original strand, 52838231 - 52838399
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatat 389  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||||||| || | ||||       | |||||| ||||||||||||||||||||| |||    
T  52838231 ggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgacctc-tattaaaaaaatggcaaaaatgaccccctatgtttaggaaa-tat 52838328  T
Q  390 gctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||| || |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  52838329 gctcttttgacctcctaacatacgggaaatatgctttttgacc-cttatctttacaaaaagttgcgattatg 52838399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 284 - 465
Target Start/End: Original strand, 55780381 - 55780562
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttagg 382  Q
    |||||||||||||||||  |||||||||  ||| |||  ||||||||||||||||||||||||||        | |||||||||||||||||||||||||    
T  55780381 tttttaggctaaacttcatttttcgccccttaagttttcaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagg 55780480  T
Q  383 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
     |||||||||||||||| |  ||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  55780481 gaaatatgctcttttgaccc-ctaacctaaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 55780562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 284 - 465
Target Start/End: Original strand, 55844561 - 55844742
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttagg 382  Q
    |||||||||||||||||  |||||||||  ||| |||  ||||||||||||||||||||||||||        | |||||||||||||||||||||||||    
T  55844561 tttttaggctaaacttcatttttcgccccttaagttttcaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagg 55844660  T
Q  383 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
     |||||||||||||||| |  ||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  55844661 gaaatatgctcttttgaccc-ctaacctaaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 55844742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 290 - 462
Target Start/End: Original strand, 25011735 - 25011908
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||| | ||||||| || |||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| |||||    
T  25011735 ggctaaactccacttttcgtcccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 25011834  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatga 462  Q
    ||||||||||| |  ||||||||||||  ||||| ||||||||| |||||||||||||||||||| ||||||||    
T  25011835 tgctcttttgaccccctaacataagggggatatgttttttgaccccttatctttacaaaaagttgggattatga 25011908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 290 - 465
Target Start/End: Complemental strand, 4433485 - 4433311
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntag-caaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||||| |||||||||| |||| ||| |||||||||||||||||||||| ||||        || |||||||||||||||||||||||| |||||    
T  4433485 ggctaaacttcacttttcgccc-ctaagttttaaaatgttgcgattttggcccc-tattaaaaaaaaaggcaaaagtgaccccctatgtttagggaaata 4433388  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||| |  ||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  4433387 tgctcttttgaccccctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgtgattatgaccc 4433311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 284 - 460
Target Start/End: Original strand, 41034629 - 41034807
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaa-tttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttag 381  Q
    ||||||||||||||||| |||||||| || |||| |||||||||||||| |||||| |||| ||||        | ||||||||||||||||||| | ||    
T  41034629 tttttaggctaaacttcacttttcgcactttaaagtttcaaaatgttgcaattttgaccccttattaaaaaaaatggcaaaagtgaccccctatgctcag 41034728  T
Q  382 gaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattat 460  Q
    | ||||||| |||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  41034729 ggaaatatgatcttttgacctcctaacataagggaaatatgctttttgaccccttatttttacaaaaagttgcgattat 41034807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 290 - 458
Target Start/End: Original strand, 2931321 - 2931490
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||||| ||||||||||||||| ||| |||||||||| |||||||  | |||||        | | ||||||||||||||||||||||| |||||    
T  2931321 ggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggttctctattaaaaaaaatggtaaaagtgaccccctatgtttagggaaata 2931420  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgatt 458  Q
    ||||||||||| ||  |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||    
T  2931421 tgctcttttgacctcataacataaaggaaatatgctttttgaccccttatctttacaaaaaattgcgatt 2931490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 289 - 461
Target Start/End: Complemental strand, 6789263 - 6789090
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||| ||        | ||||||||||||||||||||||||| ||||    
T  6789263 aggctaaacttcacttttcgccctttaagtttcaaaatgttgcgattttggccccctgttaaataaaatggcaaaagtgaccccctatgtttagggaaat 6789164  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||| ||| || || ||||||| || |||| ||| |||||||||  ||||||||||||||| |||||||||||    
T  6789163 atgctgtttcgacctcctaacatgagagaaaaatgttttttgacccgttatctttacaaaaaattgcgattatg 6789090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 358 - 460
Target Start/End: Complemental strand, 13826653 - 13826552
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 457  Q
    |||||||||||||| ||||||| || |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13826653 gcaaaagtgacccc-tatgtttcgggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 13826555  T
Q  458 tat 460  Q
    |||    
T  13826554 tat 13826552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 360 - 460
Target Start/End: Complemental strand, 1588645 - 1588546
Alignment:
Q  360 aaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgatta 459  Q
    |||||||||| |||||||||||| |||||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  1588645 aaaagtgacctcctatgtttagggaaatatgctcttttgaccc-ctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgatta 1588547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 283 - 465
Target Start/End: Complemental strand, 19232655 - 19232471
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttag 381  Q
    |||||| ||||||||| | ||||| |||| |||| ||||||||||||| |||||||| | ||||||        | |||||||||| ||| |||||||||    
T  19232655 attttttggctaaactccactttttgccccctaagtttcaaaatgttgtgattttggtcacctattaaaaaaaatggcaaaagtgatcccatatgtttag 19232556  T
Q  382 gaaaatatgctcttttgagcttctaacataagggaaatatgctttttg-acctcttatctttacaaaaagttgcgattatgaccc 465  Q
    | ||||||||||||||||    ||||||||||| ||||||| |||||  ||| ||||||||||||||||||||||||||||||||    
T  19232555 ggaaatatgctcttttgactccctaacataaggaaaatatgttttttttaccccttatctttacaaaaagttgcgattatgaccc 19232471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 302 - 461
Target Start/End: Original strand, 27018229 - 27018386
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagc 401  Q
    |||||||||  |||||||| ||||||||||||||||| ||||||| |       | |||||||||||||  |||||||||| |||||||||||||||| |    
T  27018229 cttttcgcctcctaaattttaaaatgttgcgattttgaccccctaataaaaaa-tggcaaaagtgaccca-tatgtttagggaaatatgctcttttgacc 27018326  T
Q  402 ttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
      |||||| |||||||||||| ||||||||| |||||| |||||||||||||| ||||||    
T  27018327 ccctaacaaaagggaaatatgttttttgaccccttatccttacaaaaagttgcaattatg 27018386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 383 - 467
Target Start/End: Original strand, 15795411 - 15795495
Alignment:
Q  383 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccat 467  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||||||| |||||||| |||||||||| |||||||||||||    
T  15795411 aaaatatgctcttttgaactcctaacataagggaaataggctttttgaccttttatcttttcaaaaagttgggattatgacccat 15795495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 465
Target Start/End: Original strand, 45633435 - 45633613
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaa 385  Q
    |||||||||||| | |||||||||| |||| ||||||||| ||||||||||| |||| ||||        | ||||||||||| ||||||||||||| ||    
T  45633435 ttaggctaaactacacttttcgccccctaagtttcaaaatattgcgattttgacccc-tattaaaaaaaatggcaaaagtgactccctatgtttagggaa 45633533  T
Q  386 atatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||| |||| |  ||||||||| ||||||||||| |||||||| |||||||||  ||||||||| |||||||||||    
T  45633534 atatgctctattgaccgcctaacataa-ggaaatatgctcttttgaccccttatcttttaaaaaagttgtgattatgaccc 45633613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 18259417 - 18259357
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18259417 taggctaaacttcacttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 18259357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 356 - 465
Target Start/End: Original strand, 23362500 - 23362607
Alignment:
Q  356 tagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcg 455  Q
    ||||||||| |||||| |||  ||||| ||||||| |||||||| | | |||||||||| |||||||||||||   ||||||||||||||||||||||||    
T  23362500 tagcaaaagcgaccccatat--ttagggaaatatgttcttttgaccctttaacataaggaaaatatgctttttagtctcttatctttacaaaaagttgcg 23362597  T
Q  456 attatgaccc 465  Q
    ||||||||||    
T  23362598 attatgaccc 23362607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 359 - 459
Target Start/End: Original strand, 4098726 - 4098827
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||||||||||||||||| || |||||||||||||||| |  ||||||||||||||||||| | |||||||| ||||||||  ||||||||||| ||    
T  4098726 caaaagtgaccccctatgttttgggaaatatgctcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcaat 4098825  T
Q  458 ta 459  Q
    ||    
T  4098826 ta 4098827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 379 - 467
Target Start/End: Complemental strand, 2715930 - 2715843
Alignment:
Q  379 taggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccat 467  Q
    |||| ||||||| |||||||| |  |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  2715930 tagggaaatatgatcttttgaccc-ctaacatatgggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccat 2715843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 284 - 453
Target Start/End: Original strand, 15734394 - 15734562
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttagga 383  Q
    |||||||| |||||| | ||||||| ||  ||| |||||||||||| |||||||||||| |||||       |  |||||||||||| |||||||||||     
T  15734394 tttttaggttaaactacacttttcggcccttaagtttcaaaatgttacgattttggcccgctattaaaaaaatgacaaaagtgaccctctatgtttaggg 15734493  T
Q  384 aaatatgctcttttgagcttctaacataa-gggaaatatgctttttgacctcttatctttacaaaaagttg 453  Q
    ||||||| |||||||| |  ||||||||| ||||||||||| ||||||||  | || ||||||||||||||    
T  15734494 aaatatgttcttttgacc--ctaacataaggggaaatatgccttttgacccgtcatgtttacaaaaagttg 15734562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 25618901 - 25618790
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt-nnnnnnntagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||| |||| |||||||||| |||||||||||||| |||||| |||||||||        | ||||||||||||||||| ||||||| ||||    
T  25618901 aggctaaacttcactttgcgccctctaagtttcaaaatgttgcaattttgaccccctattaagaaaaatggcaaaagtgaccccctaagtttagggaaat 25618802  T
Q  388 atgctcttttga 399  Q
    ||||||||||||    
T  25618801 atgctcttttga 25618790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 464
Target Start/End: Original strand, 9397260 - 9397367
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg-ctttttgacctcttatctttacaaaaagttgcga 456  Q
    |||||||||| | || |||| |||| |||||||||||||||| | |||||||||| |||||||||  ||||| |||  |||||||||||||||||||  |    
T  9397260 gcaaaagtgatctcccatgtatagggaaatatgctcttttgaccctctaacataaaggaaatatgtttttttaaccctttatctttacaaaaagttgtca 9397359  T
Q  457 ttatgacc 464  Q
    ||||||||    
T  9397360 ttatgacc 9397367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 461
Target Start/End: Complemental strand, 51291389 - 51291301
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||| ||||||| |||||||| |  ||||||||||||||||||| | |||||||| ||||||||  |||||||||| |||||||    
T  51291389 atgtttagggaaatatgttcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgtgattatg 51291301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 467
Target Start/End: Complemental strand, 24626438 - 24626346
Alignment:
Q  376 gtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgacccat 467  Q
    ||||||| ||||||||||||||||     |||||||||||||||||| | |||||||  ||||||||  |||||||||| |||||||||||||    
T  24626438 gtttagggaaatatgctcttttgactcaataacataagggaaatatgatcttttgactccttatcttctcaaaaagttgtgattatgacccat 24626346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 43793629 - 43793689
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | |||||||||| |||  ||| |||||||||||||||||||||||||||    
T  43793629 taggctaaactgcacttttcgccccctatgttttaaaatgttgcgattttggccccctatt 43793689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 45633746 - 45633682
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| |||| |||||| ||||||||||| ||| ||| |||||||||||||||| ||||||||||    
T  45633746 ttttttggcttaacttcacttttcgccctttaagttttaaaatgttgcgattttagccccctatt 45633682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 4357543 - 4357497
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| ||| |||||||||||||||||||||| |||||||||    
T  4357543 cttttcgccccctatatttcaaaatgttgcgattttgaccccctatt 4357497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 24626221 - 24626275
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccc 343  Q
    |||||||||| | ||||||||||||||| ||| ||||||||||||||||| ||||    
T  24626221 aggctaaactgcacttttcgccctctaagttttaaaatgttgcgattttgacccc 24626275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 461
Target Start/End: Complemental strand, 25618809 - 25618759
Alignment:
Q  412 agggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| |||||||| |||||||||||||||||| |||||||||    
T  25618809 agggaaatatgctcttttgaccccttatctttacaaaaagtggcgattatg 25618759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 424
Target Start/End: Original strand, 48158681 - 48158731
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct 424  Q
    ||||||||| ||||||| |||||||| | ||||||||||||||||||||||    
T  48158681 atgtttagggaaatatgatcttttgaccctctaacataagggaaatatgct 48158731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 458
Target Start/End: Complemental strand, 43336156 - 43336075
Alignment:
Q  377 tttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgatt 458  Q
    |||||| ||||||| |||||||| |||||| | | | ||||||| | | |||||||  ||||||||||||||||||||||||    
T  43336156 tttagggaaatatgttcttttgaccttctatctttatggaaataagatgtttgaccctttatctttacaaaaagttgcgatt 43336075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 4098966 - 4098902
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| ||||||||| | ||||| | ||||||| ||| ||||||||||||||||||||| |||||    
T  4098966 ttttttggctaaactgcactttttgacctctaagttttaaaatgttgcgattttggccctctatt 4098902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 4433181 - 4433241
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | |||||||||| |||  ||||| |||||||||||||||||||| ||||    
T  4433181 taggctaaactgcacttttcgccccctatgtttcataatgttgcgattttggccccttatt 4433241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 465
Target Start/End: Original strand, 33978856 - 33978908
Alignment:
Q  415 gaaatatgc-tttttgacctcttatctttac-aaaaagttgcgattatgaccc 465  Q
    ||||||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  33978856 gaaatatgcatttttggcctcttatctttacaaaaaagttgcgattatgaccc 33978908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 3927665 - 3927720
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccc 344  Q
    |||||||| | | |||||| |||||||| ||| |||||||||||||||||||||||    
T  3927665 aggctaaagtgcacttttccccctctaacttttaaaatgttgcgattttggccccc 3927720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 4099099 - 4099044
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttgg 339  Q
    ||||| ||||||||| | ||||| | ||||||||||| ||||||||||||||||||    
T  4099099 ttttttggctaaactgcactttttgacctctaaattttaaaatgttgcgattttgg 4099044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 20919333 - 20919384
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttgg 339  Q
    ||||||||||| | ||||||| || |||| ||||||||||||||||||||||    
T  20919333 taggctaaactgcacttttcgacccctaagtttcaaaatgttgcgattttgg 20919384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 25012039 - 25011980
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | |||||||||| |||  ||||| |||||||| ||||||||||||||||    
T  25012039 aggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggccccctatt 25011980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 2715731 - 2715777
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| ||| | |||||||||||||||||||||| ||||||||    
T  2715731 cttttcgccatcttagtttcaaaatgttgcgattttggtcccctatt 2715777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 3928960 - 3928902
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctat 347  Q
    |||||||| | | |||||| ||| |||| |||||||| |||||||||||||||||||||    
T  3928960 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctat 3928902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 348
Target Start/End: Complemental strand, 9397493 - 9397435
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | |||||| ||| |||| ||| ||||||||| |||||||||||||||||    
T  9397493 ggctaaactgcacttttcaccccctaagttttaaaatgttgggattttggccccctatt 9397435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 47869944 - 47869899
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||| |||| ||| |||||||||||||| |||||||||||||||||    
T  47869944 tttttgccccctatatttcaaaatgttgtgattttggccccctatt 47869899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 13826418 - 13826478
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | | |||||||||| |||  ||| ||||||||||||||||| |||||||||    
T  13826418 taggctaaagtgcacttttcgccccctatgtttaaaaatgttgcgattttgaccccctatt 13826478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 17138592 - 17138540
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgatttt 337  Q
    |||| ||||||||| | |||||||||| |||| ||| ||||||||||||||||    
T  17138592 tttttggctaaactccacttttcgccccctaagttttaaaatgttgcgatttt 17138540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 346
Target Start/End: Complemental strand, 25685931 - 25685867
Alignment:
Q  282 tatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccccta 346  Q
    |||| |||||||||| | | |||||| |||||||| ||||||||  |||| ||||||||||||||    
T  25685931 tattattaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccccta 25685867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 289 - 461
Target Start/End: Original strand, 17648242 - 17648415
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||||||||| |||||||        | ||||||||||||||||||||||||| ||||    
T  17648242 aggctaaacttcacttttcgccctctaagtttcaaaatgttgtgattttggctccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 17648341  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17648342 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 17648415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 289 - 461
Target Start/End: Complemental strand, 4519172 - 4518999
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||||||||||| |||||||        | ||||||||||||||||||||||||| ||||    
T  4519172 aggctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 4519073  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  4519072 atgctcttttgatctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 4518999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 290 - 461
Target Start/End: Complemental strand, 30784568 - 30784396
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||        | |||||||||||||| |||||||||| |||||    
T  30784568 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccttattaaaaaaaatggcaaaagtgaccccgtatgtttagggaaata 30784469  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  30784468 tgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 30784396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 290 - 461
Target Start/End: Complemental strand, 8802703 - 8802532
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||        | ||||||||||||| ||||||||||| |||||    
T  8802703 ggctaaactttacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccctctatgtttagggaaata 8802604  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  8802603 tgctcttttgacctcctaacataagggaaata-gctttttgaccccttatctttacaaaaagttgcgattatg 8802532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 288 - 465
Target Start/End: Original strand, 38630053 - 38630231
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaa 386  Q
    |||| ||||||||  |||||||||||||| |||||||||||||||||||||  ||||||||        | | ||||||||| ||||||||||||| |||    
T  38630053 taggttaaacttcatttttcgccctctaagtttcaaaatgttgcgattttgatcccctattaaaaaaaatggtaaaagtgactccctatgtttagggaaa 38630152  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38630153 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 38630231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 285 - 461
Target Start/End: Complemental strand, 12723570 - 12723393
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttagga 383  Q
    |||| ||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||        | |||||| |||||||||||||||||      
T  12723570 tttttggccaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaaatgaccccctatgtttagag 12723471  T
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  12723470 aaatatgctcttttgacctcctaacataagggaaatatgttttttgacccgttatctttacaaaaagttgcgattatg 12723393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 285 - 465
Target Start/End: Original strand, 19924260 - 19924441
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttagga 383  Q
    |||| |||||||| || ||||||||||||||| ||| |||||||||| ||||||||||| ||||        | |||||||||||||||||||||||||     
T  19924260 tttttggctaaacctcacttttcgccctctaagttttaaaatgttgcaattttggccccttattaaaaaaaatggcaaaagtgaccccctatgtttaggg 19924359  T
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||| ||||| ||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19924360 aaatatactcttctgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 19924441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 289 - 465
Target Start/End: Original strand, 44146971 - 44147146
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||        | |||||||||||||| |||||||||| ||||    
T  44146971 aggctaaacttcacttttcgccctccaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgacccc-tatgtttagggaaat 44147069  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||| |||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  44147070 atgctattttgacctcctaacataagggaaatatgctttttgaccccttatctttac-aaaagttgcgattatgaccc 44147146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 293 - 461
Target Start/End: Complemental strand, 5192572 - 5192403
Alignment:
Q  293 taaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaatatgc 391  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||||| || |||||        | |||||||||||| |||||||||||| ||||||||    
T  5192572 taaacttcacttttcgccctctaagttttaaaatgttgcgattttggtcctctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaatatgc 5192473  T
Q  392 tcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5192472 tcttttgacctcttaacataagggaaatatgttttttgacctcttatctttacaaaaagttgcgattatg 5192403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 287 - 461
Target Start/End: Complemental strand, 4807908 - 4807732
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgacccc-ctatgtttaggaa 384  Q
    |||||||||||||| ||||||||| | ||| |||||||||||||||||||  ||||||||||        |||||||||||||||| ||||||||| | |    
T  4807908 ttaggctaaacttcacttttcgccttttaagtttcaaaatgttgcgatttatgccccctattaaaaaaaatagcaaaagtgacccctctatgtttaagga 4807809  T
Q  385 aatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4807808 aatatgttcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 4807732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 290 - 461
Target Start/End: Original strand, 33895375 - 33895546
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatat 389  Q
    ||||||||||| ||||||||||||||| ||| |||||||||| |||||||  || ||||        ||||||||||| |||||||||||||| ||||||    
T  33895375 ggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggttccatattaaaaaaaaagcaaaagtgatcccctatgtttagggaaatat 33895474  T
Q  390 gctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||| || ||||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||||    
T  33895475 gctcttttgacctcctaacataagggaaatatgttttttaaccccttatctttacaaaaagttgcaattatg 33895546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 288 - 429
Target Start/End: Complemental strand, 21930107 - 21929967
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 387  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||       | |||||||||||||| |||||||||| ||||    
T  21930107 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctattaaaaaaatggcaaaagtgacccc-tatgtttagggaaat 21930009  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttg 429  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  21930008 atgctcttttgacctcctaacataagggaaatatgctttttg 21929967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 288 - 456
Target Start/End: Complemental strand, 22452479 - 22452310
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntag-caaaagtgaccccctatgtttaggaaaa 386  Q
    ||||||||||| | ||||| |||| |||||||||||||| |||||||||||| ||||||||         | ||||||||||| | ||| |||||| |||    
T  22452479 taggctaaactccacttttagccccctaaatttcaaaatattgcgattttggtcccctattaaaaaaaacggcaaaagtgacctcatatatttagggaaa 22452380  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcga 456  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22452379 tatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcga 22452310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 19391622 - 19391519
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  19391622 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgat 19391523  T
Q  458 tatg 461  Q
    ||||    
T  19391522 tatg 19391519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 318 - 461
Target Start/End: Complemental strand, 21666549 - 21666406
Alignment:
Q  318 tttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaa 417  Q
    |||||||||||||||||||||||||||||||       | ||||||||||||||| ||||||||| ||||||||||| |||| |  ||||||||||||||    
T  21666549 tttcaaaatgttgcgattttggccccctattaaaaaaatggcaaaagtgaccccccatgtttagggaaatatgctctcttgaccccctaacataagggaa 21666450  T
Q  418 atatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||| ||||||||| |||||||||| | |||||||| ||||||    
T  21666449 atatgttttttgaccccttatctttagataaagttgcaattatg 21666406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 283 - 465
Target Start/End: Complemental strand, 18881812 - 18881631
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttag 381  Q
    |||||||||||||||  | |||||||||| |||| ||| | |||||||| |||||| |||||||||        | |||||||||||||   ||||||||    
T  18881812 atttttaggctaaacaacacttttcgccccctaagttttataatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgaccc---atgtttag 18881716  T
Q  382 gaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    | ||||||||| ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| ||||||||||    
T  18881715 ggaaatatgctattttgagcttctaacataagggaaatacgctcttttgaccccttatctttacaaaaagttgcaattatgaccc 18881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 284 - 454
Target Start/End: Original strand, 3380193 - 3380363
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttagga 383  Q
    ||||| ||||||||| |  ||||| |||| ||| ||||||||||||||||||||||| |||||||       |   || |||||||||| |||||||||     
T  3380193 tttttcggctaaactgcatttttcaccctttaagtttcaaaatgttgcgattttggctccctattaaaaaaatgaaaatagtgaccccccatgtttaggt 3380292  T
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgc 454  Q
    |||||||||||||||  | |||| ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  3380293 aaatatgctcttttgtccctctagcataagggaaatatgttttttgacctcttatctctacaaaaagttgc 3380363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 358 - 465
Target Start/End: Complemental strand, 32400557 - 32400450
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||||||||||||||||||||  |||||||| ||||||| |  |||||||||||||||||||| ||||||||  |||||||||||||||||||| ||    
T  32400557 gcaaaagtgaccccctatgtttagtgaaatatgcgcttttgaccccctaacataagggaaatatgccttttgaccatttatctttacaaaaagttgcaat 32400458  T
Q  458 tatgaccc 465  Q
    ||||||||    
T  32400457 tatgaccc 32400450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 19392873 - 19392812
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  19392873 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 19392812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 467
Target Start/End: Original strand, 3208050 - 3208158
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||||| || ||||||||||| ||||||| |||||||| |  ||||||||||||||||||| | |||||||| ||||||||   |||||||||||||    
T  3208050 caaaagtgaacctctatgtttagggaaatatgttcttttgaccc-ctaacataagggaaatatgatattttgaccccttatcttcttaaaaagttgcgat 3208148  T
Q  458 tatgacccat 467  Q
    ||||||||||    
T  3208149 tatgacccat 3208158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 465
Target Start/End: Complemental strand, 4423262 - 4423157
Alignment:
Q  362 aagtgaccccctatgtttaggaaaatatgctcttttgagcttc-taacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgatta 459  Q
    ||||||||||| ||||||| | ||||||| |||||| | || | |||||||||||||||||| | |||||||| ||||||||| |||||| |||||||||    
T  4423262 aagtgaccccccatgtttatggaaatatgttcttttaacctccataacataagggaaatatgatcttttgaccccttatcttttcaaaaaattgcgatta 4423163  T
Q  460 tgaccc 465  Q
    ||||||    
T  4423162 tgaccc 4423157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 414 - 461
Target Start/End: Original strand, 23565214 - 23565261
Alignment:
Q  414 ggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23565214 ggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 23565261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 5192271 - 5192330
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| |||||||||| |||  |||||||||||||| ||||||||||||||||    
T  5192271 aggctaaacttcacttttcgccccctatgtttcaaaatgttgcaattttggccccctatt 5192330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 15869349 - 15869395
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  15869349 cttttcgccctctaaattttaaaatgttgcgattttggtcccctatt 15869395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 461
Target Start/End: Original strand, 1824676 - 1824777
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 456  Q
    ||||||||||||||  ||||||||| |||||||||||||||| |  ||||||||||| ||||||| | |||| || |||||||||  |||||||||||||    
T  1824676 gcaaaagtgacccc--atgtttagggaaatatgctcttttga-cccctaacataaggaaaatatgatcttttaacttcttatcttctcaaaaagttgcga 1824772  T
Q  457 ttatg 461  Q
     ||||    
T  1824773 gtatg 1824777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 461
Target Start/End: Original strand, 1859121 - 1859222
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 456  Q
    ||||||||||||||  ||||||||| |||||||||||||||| |  ||||||||||| ||||||| | |||| || |||||||||  |||||||||||||    
T  1859121 gcaaaagtgacccc--atgtttagggaaatatgctcttttga-cccctaacataaggaaaatatgatcttttaacttcttatcttctcaaaaagttgcga 1859217  T
Q  457 ttatg 461  Q
     ||||    
T  1859218 gtatg 1859222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 7117348 - 7117246
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 456  Q
    ||||||||||||||  ||||||||  |||||||||||||||| |  |||||| ||||| ||| || | |||| ||| ||||||||||||||||||||| |    
T  7117348 gcaaaagtgacccc--atgtttagagaaatatgctcttttgacccactaacagaaggggaatgtgttcttttaaccccttatctttacaaaaagttgcaa 7117251  T
Q  457 ttatg 461  Q
    |||||    
T  7117250 ttatg 7117246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 33895684 - 33895619
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||||| | |||||||||| ||| |||| |||||||||| ||||||| ||||||||    
T  33895684 atttttaggctaaactgcacttttcgccccctatattttaaaatgttgcaattttggtcccctatt 33895619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 4518857 - 4518927
Alignment:
Q  278 tagttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| || |||||||||| | | |||||||||| ||| |||| ||||| |||||||||||||||||||||    
T  4518857 tagtttttattaggctaaagtgcacttttcgccccctatattttaaaatattgcgattttggccccctatt 4518927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 461
Target Start/End: Complemental strand, 18253164 - 18253018
Alignment:
Q  313 ctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataa 412  Q
    ||||||||||||||||||| ||| ||  ||||||||       | | ||||||||||||  ||||||||| ||||||| | |||||| |   ||||||||    
T  18253164 ctaaatttcaaaatgttgctattctgatcccctattaaaaaaatggtaaaagtgacccc--atgtttagggaaatatgtttttttgaccca-taacataa 18253068  T
Q  413 gggaaatatg-ctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||  ||||||||| ||||||||  |||||||||| |||||||    
T  18253067 gggaaatatgattttttgaccccttatcttctcaaaaagttgtgattatg 18253018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 44147285 - 44147216
Alignment:
Q  279 agttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| |||||||||||| | | ||||||||||  ||  ||||||||| |||||||||||||||||||||    
T  44147285 agttaattttaggctaaagtgcacttttcgccccatatgtttcaaaatattgcgattttggccccctatt 44147216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 4807598 - 4807658
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | |||||||||  |||  |||||||||||||| ||||||||||||||||    
T  4807598 taggctaaactgcacttttcgcctcctatgtttcaaaatgttgcaattttggccccctatt 4807658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 461
Target Start/End: Complemental strand, 41385702 - 41385622
Alignment:
Q  382 gaaaatatgctcttttgagcttctaacataagggaaatatg-ctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||| |||||||||   ||||||||||||||||||||  ||||||||| |||||| |  |||||||||| |||||||    
T  41385702 gaaaatatactcttttgactctctaacataagggaaatatgattttttgaccccttatcatctcaaaaagttgtgattatg 41385622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 425 - 467
Target Start/End: Complemental strand, 41688278 - 41688236
Alignment:
Q  425 ttttgacctcttatctttacaaaaagttgcgattatgacccat 467  Q
    |||||||| ||||||||  ||||||||||||||||||||||||    
T  41688278 ttttgaccccttatcttctcaaaaagttgcgattatgacccat 41688236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 18881501 - 18881562
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| | ||||||| ||  ||| |||  ||||||||||||||||||||||||||    
T  18881501 ttaggctaaactgcgcttttcgacccttaagttttgaaatgttgcgattttggccccctatt 18881562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 32968453 - 32968510
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccc 344  Q
    |||||||||| | | |||||| ||| |||| |||||||| ||||||||||||||||||    
T  32968453 ttaggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccc 32968510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 38612216 - 38612277
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| |  ||||  ||| |||| ||||| |||||||||||||||||||||||||    
T  38612216 ttaggctaaactgcagttttgaccccctaactttcacaatgttgcgattttggccccctatt 38612277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 38613478 - 38613417
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| |  ||||  ||| |||| ||||| |||||||||||||||||||||||||    
T  38613478 ttaggctaaactgcagttttgaccccctaactttcacaatgttgcgattttggccccctatt 38613417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 38974784 - 38974849
Alignment:
Q  279 agttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccc 344  Q
    |||| ||||| ||||||| | | |||||| ||| |||| |||||||| ||||||||||||||||||    
T  38974784 agtttttttttggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccc 38974849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 39005882 - 39005947
Alignment:
Q  279 agttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccc 344  Q
    |||| ||||| ||||||| | | |||||| ||| |||| |||||||| ||||||||||||||||||    
T  39005882 agtttttttttggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccc 39005947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 2053145 - 2053197
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttg 338  Q
    |||||| |||||| | ||||||||||||||| ||| |||||||||| ||||||    
T  2053145 tttaggttaaactactcttttcgccctctaagttttaaaatgttgcaattttg 2053197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 461
Target Start/End: Original strand, 16233581 - 16233629
Alignment:
Q  414 ggaaatatgcttttt-gacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||| ||| | |||||||||||||||||||||||| ||||||    
T  16233581 ggaaatatgctctttcgccctcttatctttacaaaaagttgcaattatg 16233629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 19391386 - 19391445
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | |||||||||| |||  |||||||||||||| ||||||| ||||||||    
T  19391386 taggctaaactgcacttttcgccc-ctatgtttcaaaatgttgcaattttggtcccctatt 19391445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 30784259 - 30784323
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||| ||| |||||||| ||||| |||| |||  |||||||||||||| ||||||| ||||||||    
T  30784259 ttttaaggttaaacttcactttttgccccctaggtttcaaaatgttgcaattttggtcccctatt 30784323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 5e-54; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 285 - 461
Target Start/End: Original strand, 245591 - 245766
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaa 384  Q
    ||||||| |||||||| ||||||||||||||| ||||||||| |||| ||||||||||||||||       | |||||||||||||| |||||||||| |    
T  245591 ttttaggttaaacttcacttttcgccctctaagtttcaaaatattgcaattttggccccctattaaaaaaatggcaaaagtgacccc-tatgtttaggga 245689  T
Q  385 aatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  245690 aatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 245766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 290 - 461
Target Start/End: Original strand, 18695004 - 18695175
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||||||| |||||||||        | |||||||||||||| |||||||||| |||||    
T  18695004 ggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgacccc-tatgtttagggaaata 18695102  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18695103 tgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 18695175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 288 - 461
Target Start/End: Complemental strand, 25557180 - 25557007
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||   |||||||||| |||| ||||||||||||||||||||| |||||||||       | ||||||||||||||||||||||||| ||||    
T  25557180 taggctaaactctacttttcgccccctaagtttcaaaatgttgcgattttgaccccctattaaaaaaatggcaaaagtgaccccctatgtttagggaaat 25557081  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  25557080 atgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcaattatg 25557007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 289 - 461
Target Start/End: Complemental strand, 26639342 - 26639169
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||| ||||||| ||||||| |||||||||||||||||||||| ||||| ||        | |||||||||||||| |||||||||| ||||    
T  26639342 aggctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttggtcccctgttaaaaaaaatggcaaaagtgaccccatatgtttagggaaat 26639243  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  26639242 atgctcttttgacctcctaacataagggaaatatgcgttttgaccccttatctttacaaaaagttgcaattatg 26639169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 284 - 461
Target Start/End: Complemental strand, 23765699 - 23765522
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagc-aaaagtgaccccctatgtttagg 382  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||         |  |||||||||||| ||||||||||    
T  23765699 tttttaggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaaaatgataaaagtgacccc-tatgtttagg 23765601  T
Q  383 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
     |||||||||||||||| || ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  23765600 gaaatatgctcttttgacctcctaacataagggaaatatgctttttgatcatttatctttacaaaaagttgcgattatg 23765522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 284 - 461
Target Start/End: Complemental strand, 23815547 - 23815370
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagc-aaaagtgaccccctatgtttagg 382  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||         |  |||||||||||| ||||||||||    
T  23815547 tttttaggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaaaatgataaaagtgacccc-tatgtttagg 23815449  T
Q  383 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
     |||||||||||||||| || ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  23815448 gaaatatgctcttttgacctcctaacataagggaaatatgctttttgatcatttatctttacaaaaagttgcgattatg 23815370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 288 - 472
Target Start/End: Original strand, 38408627 - 38408811
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaa 386  Q
    ||||||||||| | ||||||| || |||| ||||||||| |||||||||||||||||||||        | ||||||||||||||||||||||||  |||    
T  38408627 taggctaaactccacttttcgtcccctaagtttcaaaatattgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagagaaa 38408726  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccatattct 472  Q
    ||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||| ||||    
T  38408727 tatgctcttttgacca-ctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgctattatgacccattttct 38408811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 286 - 465
Target Start/End: Original strand, 10379279 - 10379457
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaa 385  Q
    ||||||||||||  |  |||||| || |||| ||| |||||||| | ||||||||||| ||||       |||||||||||||| |||||||||||||||    
T  10379279 tttaggctaaaccccatttttcgtcccctaagttttaaaatgttacaattttggccccttattaaaaaaatagcaaaagtgacctcctatgtttaggaaa 10379378  T
Q  386 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  10379379 atatgctcttttgaccc-ctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 10379457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 318 - 461
Target Start/End: Complemental strand, 16901271 - 16901129
Alignment:
Q  318 tttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaa 417  Q
    ||||||||||||||||||||| |||||||||       | |||||||||||||| |||||||||| |||||||||||||||| || ||||||||||||||    
T  16901271 tttcaaaatgttgcgattttgaccccctattaaaaaaatggcaaaagtgacccc-tatgtttagggaaatatgctcttttgacctcctaacataagggaa 16901173  T
Q  418 atatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||    
T  16901172 atatgttttttgaccccttatctttacaaaaagttgcgattatg 16901129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 288 - 462
Target Start/End: Original strand, 36641141 - 36641316
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaa 386  Q
    ||||||||||||| ||||||||| ||||| ||||||||| ||| |||||||| ||||||||        | |||||||||| |||||||||||||  |||    
T  36641141 taggctaaacttcacttttcgccttctaagtttcaaaatattgtgattttggtcccctattaaaaaaaatggcaaaagtgagcccctatgtttagagaaa 36641240  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatga 462  Q
    ||||||||||||| || |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  36641241 tatgctcttttgacctcctaacataagggaaatatgctttttgacccgttatctttataaaaagttgcgattatga 36641316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 284 - 465
Target Start/End: Complemental strand, 40428947 - 40428767
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttagg 382  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| ||||        | |||||||| ||||| | ||||||||    
T  40428947 ttttttggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgacccc-tattaaaaaatatggcaaaagtcacccc-tgtgtttagg 40428850  T
Q  383 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
     ||||||| |||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  40428849 gaaatatgttcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaaattgcgattatgaccc 40428767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 292 - 467
Target Start/End: Original strand, 19169346 - 19169521
Alignment:
Q  292 ctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgc 391  Q
    ||||||||| ||||||| | ||||| ||| |||||||| | |||||||  | |||||       | |||||||||| |||||||||||||||||||||||    
T  19169346 ctaaacttcacttttcgtcttctaagttttaaaatgttacaattttggttctctattaaaaaaatggcaaaagtgatcccctatgtttaggaaaatatgc 19169445  T
Q  392 tcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccat 467  Q
    || ||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||    
T  19169446 tcatttgacctcttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccat 19169521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 358 - 465
Target Start/End: Complemental strand, 31055549 - 31055442
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||||||||||||||||||||| |||||||||||||||| |   |||||||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  31055549 gcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccttaacataagggaaatatgttttttgaccccttatctttacaaaaaattgcgat 31055450  T
Q  458 tatgaccc 465  Q
    ||||||||    
T  31055449 tatgaccc 31055442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 288 - 464
Target Start/End: Complemental strand, 10293391 - 10293216
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 387  Q
    ||||||||| | | ||||||| || |||| ||||||||||||| ||||||| ||| |||||       | |||||| ||||||||||||||| || ||||    
T  10293391 taggctaaattgcacttttcgtccactaagtttcaaaatgttgtgattttgacccgctattaaaaaa-tggcaaaaatgaccccctatgttttgggaaat 10293293  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacc 464  Q
    |||||||||||| || ||||||||||||||||||| ||||||||  ||||||||| |||||||||||||||||||||    
T  10293292 atgctcttttgacctcctaacataagggaaatatgttttttgactccttatctttccaaaaagttgcgattatgacc 10293216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 302 - 465
Target Start/End: Complemental strand, 16307769 - 16307604
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaatatgctcttttgag 400  Q
    ||||||||||| ||| ||| |||||||||||||||| || |||||||        | ||||||||||||||||||||||||| ||||||||||||||||     
T  16307769 cttttcgccctttaagttttaaaatgttgcgattttagctccctattaaaaaaaattgcaaaagtgaccccctatgtttagggaaatatgctcttttgac 16307670  T
Q  401 cttc-taacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |  | |||||||||| ||||||| ||||||||  ||||||||||||||||||||| ||||||||||    
T  16307669 ccccctaacataaggaaaatatgttttttgactccttatctttacaaaaagttgcaattatgaccc 16307604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 289 - 427
Target Start/End: Original strand, 8645796 - 8645935
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||||||| |||||||||        | |||||| |||||||| ||||||||| ||||    
T  8645796 aggctaaacttcacttttcgccctcttagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaattgacccccaatgtttagggaaat 8645895  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttt 427  Q
    |||||||||||| || ||||||||||||||||||| ||||    
T  8645896 atgctcttttgacctcctaacataagggaaatatgatttt 8645935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 289 - 453
Target Start/End: Complemental strand, 17704887 - 17704727
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 388  Q
    |||| ||||| | ||||||| || |||| ||||||||| |||||||||||||||||||||       |||||||||| ||||   |||||||||||||||    
T  17704887 aggccaaactacacttttcgtcccctaagtttcaaaatattgcgattttggccccctattaaaaaaatagcaaaagtaaccc---atgtttaggaaaata 17704791  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttg 453  Q
    ||||||||||| |   ||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  17704790 tgctcttttgaccca-taacataagggaaatatactttttgaccctttatctttacaaaaagttg 17704727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 360 - 465
Target Start/End: Complemental strand, 38476703 - 38476597
Alignment:
Q  360 aaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgatt 458  Q
    |||||||||||||||| |||||| |||||||||||||||| |   |||||||||||||||||| | |||||||| ||||||||  |||||||||||||||    
T  38476703 aaaagtgaccccctatatttagggaaatatgctcttttgaccccataacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgatt 38476604  T
Q  459 atgaccc 465  Q
    |||||||    
T  38476603 atgaccc 38476597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 292 - 461
Target Start/End: Original strand, 7835722 - 7835881
Alignment:
Q  292 ctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgc 391  Q
    ||||||||| ||||||||||||||| ||| ||||||||| |||||||||||| ||||         ||||||||| |  |||||||||||| ||||||||    
T  7835722 ctaaacttcacttttcgccctctaagttttaaaatgttgtgattttggcccc-tattg--------gcaaaagtggcatcctatgtttagggaaatatgc 7835812  T
Q  392 tcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||| |   |||||||||| ||||||| ||||||||| |||||||||||||| || || |||||||    
T  7835813 tcttttgaccca-taacataaggaaaatatgttttttgaccccttatctttacaaagaggtgggattatg 7835881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 358 - 465
Target Start/End: Original strand, 7187260 - 7187365
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 457  Q
    |||||| |||||||  ||||||||| ||||||  |||||||| | |||||||||||||||||||| ||| |||||  |||| ||||||||||||||||||    
T  7187260 gcaaaattgacccc--atgtttagggaaatatattcttttgaccctctaacataagggaaatatgttttatgaccaattatttttacaaaaagttgcgat 7187357  T
Q  458 tatgaccc 465  Q
    ||||||||    
T  7187358 tatgaccc 7187365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 360 - 467
Target Start/End: Original strand, 34125130 - 34125238
Alignment:
Q  360 aaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctt-tttgacctcttatctttacaaaaagttgcgatt 458  Q
    |||||||||||   ||||||||| |||||||||||||||| |  ||||||||||| ||||||| |  ||||||||||||||||  |||||||||||||||    
T  34125130 aaaagtgacccttcatgtttagggaaatatgctcttttgatcccctaacataaggaaaatatgatcatttgacctcttatcttctcaaaaagttgcgatt 34125229  T
Q  459 atgacccat 467  Q
    |||||||||    
T  34125230 atgacccat 34125238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 31648055 - 31648165
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 388  Q
    |||||||||| | ||||||| ||  |||||||||||||||||||||||| ||||||||||       | |||||||||||||| |||||||||| |||||    
T  31648055 aggctaaactccacttttcgtcccataaatttcaaaatgttgcgattttcgccccctattaaaaaaatggcaaaagtgaccccttatgtttagggaaata 31648154  T
Q  389 tgctcttttga 399  Q
    |||| ||||||    
T  31648155 tgcttttttga 31648165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 292 - 461
Target Start/End: Complemental strand, 15885465 - 15885297
Alignment:
Q  292 ctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgc 391  Q
    ||||||| | ||||| | || |||| |||||||||||||| ||||||| ||| ||||       | |||||| || |||  |||||||| | |||||| |    
T  15885465 ctaaactgcactttttgtcccctaagtttcaaaatgttgctattttggtcccttattaaaaaaatggcaaaaatgtccctttatgtttatggaaatattc 15885366  T
Q  392 tcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||| ||  |||||||||||||||||| || |||||| ||||||||||||||||||| ||||||||    
T  15885365 tcttttgacctcttaacataagggaaatatgtttgttgacc-cttatctttacaaaaagtttcgattatg 15885297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 359 - 465
Target Start/End: Complemental strand, 23040182 - 23040076
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttc--taacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcg 455  Q
    ||||||||||||   ||||||||| |||||||||||||||| || |  |||||||||||||||||| | |||||||| ||||||||  ||||||||||||    
T  23040182 caaaagtgaccc---atgtttagggaaatatgctcttttgacctcccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcg 23040086  T
Q  456 attatgaccc 465  Q
    ||||||||||    
T  23040085 attatgaccc 23040076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 359 - 465
Target Start/End: Original strand, 2373215 - 2373321
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 457  Q
    |||| ||||||||||||||||| |||||||||||||||||| |   |||||||||||||||||| | || ||||| ||||| ||  |||||| |||||||    
T  2373215 caaacgtgaccccctatgtttaagaaaatatgctcttttga-cccataacataagggaaatatgatattatgaccccttattttctcaaaaatttgcgat 2373313  T
Q  458 tatgaccc 465  Q
    ||||||||    
T  2373314 tatgaccc 2373321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 461
Target Start/End: Complemental strand, 35302223 - 35302046
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttagga 383  Q
    ||||| ||||||||| |  ||||| |||  ||| ||||||||||||||||||||| ||| |||||       | ||||||||||||||| || ||||||     
T  35302223 ttttttggctaaactgcatttttctccccttaagtttcaaaatgttgcgattttgaccctctattataaaaatggcaaaagtgaccccc-atatttaggg 35302125  T
Q  384 aaatatgctcttttgagcttctaacataagggaaatatg--ctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||||||| |  ||||||||| | |||||||  |||||||||| ||||||||   |||||| ||||||||||    
T  35302124 aaatatgctcttttgaccccctaacataatgtaaatatgatctttttgacc-cttatcttctaaaaaagctgcgattatg 35302046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 461
Target Start/End: Complemental strand, 37961486 - 37961380
Alignment:
Q  356 tagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgc 454  Q
    |||||||||||| |||| ||||||||| ||||| |||||||||| |  ||||||||||||||| ||| | |||||||| |||| |||  |||||||||||    
T  37961486 tagcaaaagtgatcccccatgtttagggaaatacgctcttttgaccgcctaacataagggaaaaatgatcttttgaccccttaacttctcaaaaagttgc 37961387  T
Q  455 gattatg 461  Q
     ||||||    
T  37961386 aattatg 37961380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 464
Target Start/End: Original strand, 462851 - 462941
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgacc 464  Q
    ||||||||| ||||||||  |||||| ||  ||| ||||| |||||||| | |||||||| |||||||||||||||||||||||||||||||    
T  462851 atgtttagggaaatatgcctttttgaccta-taatataagagaaatatgttcttttgaccccttatctttacaaaaagttgcgattatgacc 462941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 20654105 - 20654040
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||||| | ||||||| || |||| ||||||||||||| |||||||||| ||||||    
T  20654105 atttttaggctaaactgcacttttcgacccctaagtttcaaaatgttgtgattttggcctcctatt 20654040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 467
Target Start/End: Complemental strand, 8674038 - 8673982
Alignment:
Q  412 agggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgacccat 467  Q
    ||||||||||||| |||||||| |||||||||||||||||||| |||||| ||||||    
T  8674038 agggaaatatgctcttttgaccccttatctttacaaaaagttgtgattataacccat 8673982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 461
Target Start/End: Complemental strand, 17825716 - 17825629
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||| |||||||||||||||| |  |||||||||| |||||||| | ||||||||  |||||||  ||||||||||||||||||    
T  17825716 atgtttagggaaatatgctcttttga-cccctaacataagagaaatatgttcttttgaccctttatcttgtcaaaaagttgcgattatg 17825629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 428
Target Start/End: Complemental strand, 41663756 - 41663689
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgcttttt 428  Q
    |||||||||||||  ||||||||| |||||||||||||||| |   |||||||||||||||||| |||||    
T  41663756 caaaagtgacccc--atgtttagggaaatatgctcttttgaccccataacataagggaaatatgattttt 41663689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 31055312 - 31055373
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| | |||||||||| |||  ||||| |||||||| ||||||||||||||||    
T  31055312 ttaggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggccccctatt 31055373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 18695308 - 18695248
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | | |||||||||| |||  ||||||||| |||||||||||||||||||||    
T  18695308 taggctaaagtgcacttttcgccccctatgtttcaaaatattgcgattttggccccctatt 18695248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 31648293 - 31648237
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcc 341  Q
    |||||||||||||| | ||||||| || |||  ||||||||||||||||||||||||    
T  31648293 ttttaggctaaactgcacttttcgtcccctatgtttcaaaatgttgcgattttggcc 31648237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 16900996 - 16901055
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | |||||||||  |||  ||||||||||||||||||||| |||||||||    
T  16900996 aggctaaactgcacttttcgcctcctatgtttcaaaatgttgcgattttgaccccctatt 16901055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 23765418 - 23765473
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccc 343  Q
    ||||||||||| | |||||||||| |||  |||||||||||||| |||||||||||    
T  23765418 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccc 23765473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 23815266 - 23815321
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccc 343  Q
    ||||||||||| | |||||||||| |||  |||||||||||||| |||||||||||    
T  23815266 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccc 23815321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 348
Target Start/End: Original strand, 24025036 - 24025079
Alignment:
Q  305 ttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||| |||| ||||||||| |||||||||||||||||||||    
T  24025036 ttcgccccctaagtttcaaaatattgcgattttggccccctatt 24025079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 2373453 - 2373391
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||| | ||||||  || |||| |||||||| ||||||||||||||| ||||||    
T  2373453 tttaggctaaactgcacttttcaacccctaagtttcaaaaagttgcgattttggcctcctatt 2373391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 38322335 - 38322377
Alignment:
Q  424 tttttgacctcttatctttac-aaaaagttgcgattatgaccc 465  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  38322335 tttttgacctcttatctttacaaaaaagttgcgattttgaccc 38322377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 40428651 - 40428697
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| |||  |||||||||||||||||||||| ||||||||    
T  40428651 cttttcgccccctatgtttcaaaatgttgcgattttggtcccctatt 40428697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 456
Target Start/End: Original strand, 20653905 - 20653987
Alignment:
Q  374 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg--ctttttgacctcttatctttacaaaaagttgcga 456  Q
    ||||||||| |||||||||||||||| |  |||||||||| ||||||||  |||||| | ||||||||||  |||||||||||||    
T  20653905 atgtttagggaaatatgctcttttga-cccctaacataagtgaaatatgaacttttt-atctcttatcttctcaaaaagttgcga 20653987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 31576487 - 31576551
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| ||||||||| | ||||||| || |||| |||||||||||||| |||||||  |||||||    
T  31576487 ttttttggctaaactgcacttttcgacccctaagtttcaaaatgttgcaattttggaaccctatt 31576551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 38408937 - 38408873
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||||| |  |||||| ||||||  ||| | |||||||||||||||| ||||||||    
T  38408937 tttttaggctaaactgcatttttcgtcctctatgttttataatgttgcgattttggtcccctatt 38408873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 289 - 461
Target Start/End: Complemental strand, 5954 - 5781
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||| ||||||| ||||||| ||||||||| |||||||||||||||||||||        | ||||||||||||||||||||||||| ||||    
T  5954 aggctaaacttcacttttcggcctctaagtttcaaaatattgcgattttggccccctatttaaaaaaatggcaaaagtgaccccctatgtttagggaaat 5855  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  5854 atgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 5781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 5648 - 5708
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | |||||||||| |||  |||||||||||| | ||||||||| ||||||    
T  5648 taggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggcctcctatt 5708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 289 - 461
Target Start/End: Original strand, 61813 - 61986
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| ||||    
T  61813 aggctaaacttcacttttcgccttctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 61912  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||  | ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  61913 atgctcttttgacatcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatg 61986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 284 - 461
Target Start/End: Original strand, 19279 - 19454
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttagga 383  Q
    ||||| |||||||||   |||||||||  |||| ||||||||||||||||||||| |||||||||       | |||||||||||||| ||||||||||     
T  19279 ttttttggctaaactctacttttcgcctcctaagtttcaaaatgttgcgattttgaccccctattaaaaaaatggcaaaagtgacccc-tatgtttaggg 19377  T
Q  384 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19378 aaatatgctcttttgaccc-ctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 19454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 286 - 467
Target Start/End: Complemental strand, 142254 - 142073
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaa 384  Q
    |||||| |||||||| ||||||||||||||| ||| |||||||||| ||||||| ||||||||        | |||||||||||||| |||||||||| |    
T  142254 tttaggttaaacttcacttttcgccctctaagttttaaaatgttgcaattttggtcccctattaaaaaaaatggcaaaagtgacccc-tatgtttaggga 142156  T
Q  385 aatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccat 467  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  142155 aatatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatggcccat 142073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 101; Significance: 8e-50; HSPs: 2)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 288 - 465
Target Start/End: Complemental strand, 2353 - 2177
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 387  Q
    ||||||||| | | ||||||||| ||||| ||| |||| ||||||||||||||||||||||       | ||||||||||||||||||||||||| ||||    
T  2353 taggctaaagtccacttttcgccttctaagttttaaaa-gttgcgattttggccccctattaaaaaaatggcaaaagtgaccccctatgtttagggaaat 2255  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||||||||| || |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2254 atgctcttttgacctcctaacataagggcaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 2177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 2047 - 2106
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | |||||||||| |||  ||| |||||||||| ||||||||||||||||    
T  2047 aggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttggccccctatt 2106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 96; Significance: 7e-47; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 290 - 461
Target Start/End: Complemental strand, 3264 - 3092
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    |||||||| || ||||||||||||||| |||||||||||||| |||||| |||||||||        | |||||||||||| |||||||||||| |||||    
T  3264 ggctaaacctcacttttcgccctctaagtttcaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaata 3165  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  3164 tgctcttttgacctcctaacataagggaaatatgttttttgacctcttatctttacaaaaagttgcaattatg 3092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 2973 - 3019
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||    
T  2973 cttttcgccccctatgtttcaaaatgttgcgattttggccccctatt 3019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 287 - 465
Target Start/End: Complemental strand, 2080 - 1902
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 386  Q
    ||||| |||||||| |||||| |||||||| |||||||||||||||||||||  ||| | |        | ||||||||||||||||||||||||| |||    
T  2080 ttaggttaaacttcacttttcaccctctaagtttcaaaatgttgcgattttgatcccttttaaaaaaaatggcaaaagtgaccccctatgtttagggaaa 1981  T
Q  387 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    |||||| |||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1980 tatgctattttgaccccctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 1902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 283 - 465
Target Start/End: Original strand, 49652 - 49835
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttag 381  Q
    |||||||||||||| | | ||||||||||  ||| ||| |||||||||||||||||| ||||||||        | ||| |||||||||||||||||| |    
T  49652 atttttaggctaaagtccacttttcgccccttaagttttaaaatgttgcgattttggacccctattaaaaaaaatggcacaagtgaccccctatgtttcg 49751  T
Q  382 gaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    | |||||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  49752 ggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 49835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 283 - 465
Target Start/End: Original strand, 62191 - 62374
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttag 381  Q
    |||||||||||||| | | ||||||||||  ||| ||| |||||||||||||||||| ||||||||        | ||| |||||||||||||||||| |    
T  62191 atttttaggctaaagtccacttttcgccccttaagttttaaaatgttgcgattttggacccctattaaaaaaaatggcacaagtgaccccctatgtttcg 62290  T
Q  382 gaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    | |||||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  62291 ggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 62374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 281 - 465
Target Start/End: Original strand, 66174 - 66350
Alignment:
Q  281 ttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgatttt-ggccccctattnnnnnnntagcaaaagtgaccccctatgttt 379  Q
    ||||| |||||||||||||| ||||||||||||||| ||| |||||||||| ||||| |||||||||||        |  |||| || |||| |||||||    
T  66174 ttattattaggctaaacttcacttttcgccctctaagttttaaaatgttgcaatttttggccccctatt--------aaaaaaaatggcccc-tatgttt 66264  T
Q  380 aggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||| ||||||||| |||||| || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  66265 agggaaatatgctattttgacctcctaacataagggaactatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 66350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 289 - 461
Target Start/End: Complemental strand, 25269 - 25096
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 387  Q
    ||||||||||||  |||||| ||||||| ||  |||||||||||||||||||||| ||||        | | ||||||||||||||||||||||| ||||    
T  25269 aggctaaacttcatttttcgtcctctaagttctaaaatgttgcgattttggccccttattaaaaaaaatggtaaaagtgaccccctatgtttagggaaat 25170  T
Q  388 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||  |||||||| |||||||    
T  25169 atgctcttttgaccccctaacataagggaaatatgctttttgaccccttatctttaacaaaagttgtgattatg 25096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 290 - 460
Target Start/End: Original strand, 1997 - 2162
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaata 388  Q
    ||||||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||||        | ||||||||||||||      ||||| |||||    
T  1997 ggctaaactttacttttcgccctctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgacccc------ttagggaaata 2090  T
Q  389 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattat 460  Q
    ||||||||||| || ||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||    
T  2091 tgctcttttgacctcctaacataagggaaacatgctttttgaccccatatctttacaaaaagttgcgattat 2162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 358 - 460
Target Start/End: Complemental strand, 3801 - 3701
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 457  Q
    ||||||||||||||  ||||||||| |||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  3801 gcaaaagtgacccc--atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgctttttgaccccttatctttacaaaaagtttcgat 3704  T
Q  458 tat 460  Q
    |||    
T  3703 tat 3701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 358 - 465
Target Start/End: Complemental strand, 991 - 884
Alignment:
Q  358 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 456  Q
    ||||||||||||||  ||||||||| | ||||||| |||||| |||||||||||||| ||||||||| |||||||| ||||||||||||||||||||| |    
T  991 gcaaaagtgacccca-atgtttagggatatatgctattttgaccttctaacataaggtaaatatgctcttttgaccccttatctttacaaaaagttgcaa 893  T
Q  457 ttatgaccc 465  Q
    |||||||||    
T  892 ttatgaccc 884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 754 - 814
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | |||||| |||  ||| |||| ||||||||||||||||||||||||||    
T  754 taggctaaactgcacttttcaccccttaagtttcgaaatgttgcgattttggccccctatt 814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 369 - 464
Target Start/End: Original strand, 5911 - 6007
Alignment:
Q  369 cccctatgtttaggaaaatatgctcttttgagcttc-taacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacc 464  Q
    |||||||||||||| ||||||||| |||||| |  | |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  5911 cccctatgtttagggaaatatgctattttgacccccctaacataagggaaatatgctttttgaccccttatctttataaaaagttgcgattatgacc 6007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 288 - 413
Target Start/End: Original strand, 5288 - 5413
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 387  Q
    ||||||||||| | ||| ||||||| ||  |||||||||||||| ||||||||||||||||       | |||||||||||||| ||||||||| |||||    
T  5288 taggctaaactacacttctcgccctttatgtttcaaaatgttgcaattttggccccctattaaaaaaatggcaaaagtgaccccttatgtttagaaaaat 5387  T
Q  388 atgctcttttgagcttctaacataag 413  Q
    |||||||||||| || ||||| ||||    
T  5388 atgctcttttgacctcctaacgtaag 5413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 365 - 467
Target Start/End: Original strand, 455102 - 455205
Alignment:
Q  365 tgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgac 463  Q
    |||||||| ||||||||||||||||| |||||| | |  ||||||||||||||||||| | |||||||| ||||||||  | ||||||||||||||||||    
T  455102 tgaccccccatgtttaggaaaatatgttcttttaaccccctaacataagggaaatatgatcttttgaccccttatcttctctaaaagttgcgattatgac 455201  T
Q  464 ccat 467  Q
    ||||    
T  455202 ccat 455205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 465
Target Start/End: Original strand, 455000 - 455107
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 457  Q
    |||||||||||||| ||||||||| |||||||||||||| | |  ||||||||| ||||||| | | |||||||| ||||||||  | |||||||  |||    
T  455000 caaaagtgaccccccatgtttagggaaatatgctcttttaaccccctaacataaaggaaatacgatcttttgaccccttatcttctctaaaagttttgat 455099  T
Q  458 tatgaccc 465  Q
    ||||||||    
T  455100 tatgaccc 455107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 348
Target Start/End: Complemental strand, 455331 - 455274
Alignment:
Q  291 gctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||| | |||||||  | |||| |||||||||||||||||||||||||||||||    
T  455331 gctaaactgcacttttcgaaccctaagtttcaaaatgttgcgattttggccccctatt 455274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 436418 - 436354
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||  ||||| | ||||| |||| |||||||||||||||||| |||||||| | ||||||    
T  436418 tttttaggtaaaactgcactttttgccccctaaatttcaaaatgttgtgattttggtcacctatt 436354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 465
Target Start/End: Complemental strand, 3118 - 3056
Alignment:
Q  404 ctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  3118 ctaacataaggtaaatatgctattttgaccccttatttttacaaaaagttgcgattatgaccc 3056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 461
Target Start/End: Complemental strand, 44102 - 43956
Alignment:
Q  313 ctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataa 412  Q
    |||| |||||||||||||  ||||||||||||||||       | ||||||||| ||||  ||||||||||||||||||| |||||| |  |||||  ||    
T  44102 ctaagtttcaaaatgttgtaattttggccccctattaaaaaaatggcaaaagtgccccc--atgtttaggaaaatatgcttttttga-cccctaacgaaa 44006  T
Q  413 gggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||||| | ||||||||| |||||||  ||||||||||||| ||||    
T  44005 gggaaatatgatcttttgaccttttatcttctcaaaaagttgcgactatg 43956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 461
Target Start/End: Complemental strand, 250703 - 250650
Alignment:
Q  408 cataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  250703 cataagggaaatatgttttttgaccccttatctttacaaaaagttgtgattatg 250650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 461
Target Start/End: Original strand, 29718 - 29888
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 388  Q
    |||||||||| | ||||| |||| |||| ||||||||||||| | |||||| ||| ||||       |   ||||||||||||  |||||| || |||||    
T  29718 aggctaaactgcactttttgccccctaagtttcaaaatgttgagtttttggacccttattaaaaaaatgaaaaaagtgacccc--atgtttggggaaata 29815  T
Q  389 tgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||||| || |  ||||||||||||||||||| | |||||||| ||||||||  ||||||||||| ||||||    
T  29816 tgctctttggaccc-ctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcaattatg 29888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 460
Target Start/End: Original strand, 9992 - 10092
Alignment:
Q  359 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 457  Q
    |||||||||||| | ||||||||| |||||||||||||||| |   |||||||||| ||||||| | ||| |||| ||||||||  ||||||||||||||    
T  9992 caaaagtgaccctc-atgtttagggaaatatgctcttttga-cccataacataaggaaaatatgatctttagaccccttatcttctcaaaaagttgcgat 10089  T
Q  458 tat 460  Q
    |||    
T  10090 tat 10092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 461
Target Start/End: Original strand, 54492 - 54542
Alignment:
Q  412 agggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  54492 agggaaatatgctcttttggccccttatctttacaaaaagttgcgattatg 54542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 461
Target Start/End: Original strand, 112214 - 112299
Alignment:
Q  377 tttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 461  Q
    |||||| ||||||||  |||||| || ||||||||||||||||||| | |||||||  ||||||||  |||||||||||| |||||    
T  112214 tttagggaaatatgcctttttgacctcctaacataagggaaatatgatcttttgactccttatcttctcaaaaagttgcggttatg 112299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 465
Target Start/End: Original strand, 9168 - 9208
Alignment:
Q  425 ttttgacctcttatctttacaaaaagttgcgattatgaccc 465  Q
    ||||||||  |||||||| ||||||||||||||||||||||    
T  9168 ttttgacccattatcttttcaaaaagttgcgattatgaccc 9208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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