View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0844_low_7 (Length: 533)
Name: NF0844_low_7
Description: NF0844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0844_low_7 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 339; Significance: 0; HSPs: 21)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 5 - 427
Target Start/End: Original strand, 4783740 - 4784162
Alignment:
| Q |
5 |
cattccaaattacattgtaccagaagctgtatacttgaccgctagaagttatggaatggatgagacagaggattacaatgtaacttggaattttgaggtt |
104 |
Q |
| |
|
||||||||||||||||| |||||||| ||| ||||| || || ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| |
|
|
| T |
4783740 |
cattccaaattacattgcaccagaaggtgtttacttaactgcaagaagttatggaatgtatgagacagaggattacaatgtaacttggaactttgaagtt |
4783839 |
T |
|
| Q |
105 |
gattcttcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagatgata |
204 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4783840 |
gattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaatttttcagattttcatagatgata |
4783939 |
T |
|
| Q |
205 |
gtttggctgaaccaagtgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaaggcggaag |
304 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4783940 |
gtttggctgaacatgctgctgatgtgataaggtggagtggtgctcctttggttcctgttcataaggattatgccgtgactatgggttctcaaggcggaag |
4784039 |
T |
|
| Q |
305 |
ctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaatcgagatt |
404 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
4784040 |
ctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaacctatgcctacggtatatcgtgatgtcacgttgaatggaattgagatt |
4784139 |
T |
|
| Q |
405 |
ttgaaaataagtgataaatataa |
427 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
4784140 |
ttgaaaataagtgataaaaataa |
4784162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 5 - 427
Target Start/End: Original strand, 4816169 - 4816591
Alignment:
| Q |
5 |
cattccaaattacattgtaccagaagctgtatacttgaccgctagaagttatggaatggatgagacagaggattacaatgtaacttggaattttgaggtt |
104 |
Q |
| |
|
||||||||||||||||| |||||||| ||| ||||| || || ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| |
|
|
| T |
4816169 |
cattccaaattacattgcaccagaaggtgtttacttaactgcaagaagttatggaatgtatgagacagaggattacaatgtaacttggaactttgaagtt |
4816268 |
T |
|
| Q |
105 |
gattcttcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagatgata |
204 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4816269 |
gattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaatttttcagattttcatagatgata |
4816368 |
T |
|
| Q |
205 |
gtttggctgaaccaagtgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaaggcggaag |
304 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4816369 |
gtttggctgaactttttgctgatgtgatatggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcatggcggaag |
4816468 |
T |
|
| Q |
305 |
ctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaatcgagatt |
404 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
4816469 |
ctctcaaattgaaaaagttaatctttcgatcaagctacatcgattaccaaaacctatgccttcggtatatcgtgatgtcacgttgaatggaattgagatt |
4816568 |
T |
|
| Q |
405 |
ttgaaaataagtgataaatataa |
427 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
4816569 |
ttgaaaataagtgataaaaataa |
4816591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 5 - 525
Target Start/End: Complemental strand, 4637047 - 4636533
Alignment:
| Q |
5 |
cattccaaattacattgtaccagaagctgtatacttgaccgctagaagttatggaatggatgagacagaggattacaatgtaacttggaattttgaggtt |
104 |
Q |
| |
|
||||||||||||||||| |||||||| ||| ||||| || || |||||||| |||||| |||||||| ||||||| |||||||||||||| ||||| ||| |
|
|
| T |
4637047 |
cattccaaattacattgcaccagaagttgtgtacttaactgcaagaagttacggaatgtatgagacaaaggattataatgtaacttggaactttgaagtt |
4636948 |
T |
|
| Q |
105 |
gattcttcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagatgata |
204 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||| | | |
|
|
| T |
4636947 |
gattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaactataaaggtgatagagtctttcagatattcatagataaca |
4636848 |
T |
|
| Q |
205 |
gtttggctgaaccaagtgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaaggcggaag |
304 |
Q |
| |
|
||||| |||| || || ||||||||| ||||||||||||||| | | |||||||||||||||||||||| || |||||| | || || |
|
|
| T |
4636847 |
ctttggttgaagaaaaggcggatgtgatagggtggagtggtgctcgtatggttcctgttcataaggattatgttgtttctatgg------agggattaat |
4636754 |
T |
|
| Q |
305 |
ctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaatcgagatt |
404 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||| |||||||||||| || | |||||||| || ||||||||||| | | ||||||||||||||| |
|
|
| T |
4636753 |
ctctcaaattgaaagagtttatctttcaatcaagcttcaacgattaccacaacccatgcctacagtatatcgtgatgttattcttaatggaatcgagatt |
4636654 |
T |
|
| Q |
405 |
ttgaaaataagtgataaatataacaatctcgctggtttgaatcccaacaaacacattatactttcatctaaaaaatcaaagtccaagaagtcaaccatag |
504 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| ||| |
|
|
| T |
4636653 |
ttcaaaattagtgataaatataacaatctcgctggtttgaatcccaacaaacacattatactatcatctcaaaaacaaaagtccaagaagtcaactgtag |
4636554 |
T |
|
| Q |
505 |
tcatagttggagtttcatctc |
525 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
4636553 |
tcatagttggagtttcatctc |
4636533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 1 - 422
Target Start/End: Complemental strand, 4631121 - 4630700
Alignment:
| Q |
1 |
ataccattccaaattacattgtaccagaagctgtatacttgaccgctagaagttatggaatggatgagacagaggattacaatgtaacttggaattttga |
100 |
Q |
| |
|
|||||||| ||||||||| || |||||||||||| ||||| || || ||||||||||||||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
4631121 |
ataccatttcaaattacactgcaccagaagctgtttacttaactgcgagaagttatggaatggatgcaacaaaggattacaatgtaacttggaattttga |
4631022 |
T |
|
| Q |
101 |
ggttgattcttcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||| | || | | | | ||||||||| |||||||||||||||| | |
|
|
| T |
4631021 |
agttgattcttcttttacttatatggtaagattacatttttgtgagtttgaaatgacgataagagatcaaggtgatagagtctttcagattttcatagct |
4630922 |
T |
|
| Q |
201 |
gatagtttggctgaaccaagtgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaaggcg |
300 |
Q |
| |
|
| | | | ||||| || |||||||||||||||||||||||||||| | | |||||| |||||||||||||| ||| |||| ||||||| | |
|
|
| T |
4630921 |
aacattctagctgaggaaaaagctgatgtgataaggtggagtggtgctcgtatggttcctactcataaggattatgttgtgcttatgtactctcaagaag |
4630822 |
T |
|
| Q |
301 |
gaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaatcga |
400 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||||||| | |||| |||| || |||| | || | |||||||||||| | |||||||||| || |
|
|
| T |
4630821 |
gaagctctcaaattgaaagagttaatctttcaatcaagcttcgacgagcaccagaaactatacacacaatatatcgtgatgtcctgctgaatggaattga |
4630722 |
T |
|
| Q |
401 |
gattttgaaaataagtgataaa |
422 |
Q |
| |
|
|||||| ||||||||||||||| |
|
|
| T |
4630721 |
gattttcaaaataagtgataaa |
4630700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 3 - 427
Target Start/End: Complemental strand, 4864114 - 4863690
Alignment:
| Q |
3 |
accattccaaattacattgtaccagaagctgtatacttgaccgctagaagttatggaatggatgagacagaggattacaatgtaacttggaattttgagg |
102 |
Q |
| |
|
||||||| |||||||| || |||||||| ||| ||||| || || |||||||| ||| | ||| |||||||| ||||||||||||||||||||||| | |
|
|
| T |
4864114 |
accattcaaaattacactgcaccagaagttgtgtacttaactgcaagaagttacggacagtatgccacagaggagtacaatgtaacttggaattttgaag |
4864015 |
T |
|
| Q |
103 |
ttgattcttcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagatga |
202 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||| | |||| | | | | ||||||||| |||||||||||||||| | | |
|
|
| T |
4864014 |
ttgattctaattttacttatatggtaaggttacatttttgtgagtttgatccgaatataacaaataaaggtgatagagcctttcagattttcatagttaa |
4863915 |
T |
|
| Q |
203 |
tagtttggctgaaccaagtgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaaggcgga |
302 |
Q |
| |
|
|||| ||||||| || |||||||||||| ||||||| ||| ||| | | ||||||||||||||||||||| | ||| |||| ||| ||| ||| |
|
|
| T |
4863914 |
tagtatggctgaggaaaacgctgatgtgatacggtggagcggttctcgtatggttcctgttcataaggattatactgtgtctataaactctgaagaagga |
4863815 |
T |
|
| Q |
303 |
agctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaatcgaga |
402 |
Q |
| |
|
|||||||||||||||| |||||| |||||| ||||| |||||| ||||||||| | ||| ||| || |||||||| ||||||||||||||||||| |
|
|
| T |
4863814 |
agctctcaaattgaaagagttaacctttcgctcaagttacaacaattaccaaagaccatgtttacaaaataccgtgatgttacgttgaatggaatcgaga |
4863715 |
T |
|
| Q |
403 |
ttttgaaaataagtgataaatataa |
427 |
Q |
| |
|
|||| |||||||| |||||| |||| |
|
|
| T |
4863714 |
tttttaaaataagcgataaaaataa |
4863690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 465
Target Start/End: Original strand, 4711976 - 4712437
Alignment:
| Q |
1 |
ataccattccaaattacattgtaccagaagctgtatacttgaccgctagaagttatggaatggatgagacagaggattacaatgtaacttggaattttga |
100 |
Q |
| |
|
|||||||||| ||||||| || |||||||||||||||||| || || ||||||||||||||||||| |||||||||||| ||||||||||||||||| | |
|
|
| T |
4711976 |
ataccattcccaattacactgcaccagaagctgtatactttactgcaagaagttatggaatggatgtgacagaggattataatgtaacttggaatttcaa |
4712075 |
T |
|
| Q |
101 |
ggttgattcttcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagat |
200 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||| | | ||||||||| |||||||| || || || |
|
|
| T |
4712076 |
agttgattctagttttacttatatggtaaggttacatttttgtgagtttgatctgcttatcaagaataaaggtgatagagtttttcagatatttatcaat |
4712175 |
T |
|
| Q |
201 |
gatagtttggctgaaccaagtgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaaggcg |
300 |
Q |
| |
|
|||| ||||||||||| | ||||||||||| |||||||||| | | |||||||||||||||||||||| |||| ||| |||||| | |
|
|
| T |
4712176 |
gatattttggctgaacaatacgctgatgtgatttactggagtggtggtaacatgattcctgttcataaggattatgctgtgaaaatgtactctcaaaatg |
4712275 |
T |
|
| Q |
301 |
gaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaatcga |
400 |
Q |
| |
|
|||||||| ||||||||| |||||| ||||| || ||||| |||||| |||| || ||| || || |||||||||| |||||||||| || |
|
|
| T |
4712276 |
gaagctctgaaattgaaagagttaacctttcaattaagcttcaacgagaaccagaaagtatctacacaaattaccgtgatgtcataatgaatggaattga |
4712375 |
T |
|
| Q |
401 |
gattttgaaaataagtgataaatataacaatctcgctggtttgaatcccaacaaacacattatac |
465 |
Q |
| |
|
|||||| ||||||||||||||| || |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
4712376 |
gattttcaaaataagtgataaa---aataatctcgctggtttgaatcccatcaaacacattatac |
4712437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 436
Target Start/End: Complemental strand, 4667132 - 4666694
Alignment:
| Q |
1 |
ataccattccaaattacattgtaccagaagctgtatacttgaccgctagaagttatggaatggatgagacagaggattacaatgtaacttggaattttga |
100 |
Q |
| |
|
|||| ||||||||||||| || |||||||| ||| ||||| || || ||||||||||||||||||| | |||| |||| ||||| || ||||||||| | |
|
|
| T |
4667132 |
atactattccaaattacactgcaccagaagttgtgtacttaactgcaagaagttatggaatggatgccaaagagaattataatgtgacatggaattttaa |
4667033 |
T |
|
| Q |
101 |
ggttgattcttcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagat |
200 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||||||| |||||| |
|
|
| T |
4667032 |
agttgattctatttttacttatatggtaaggttgcatttttgtgagtttgattggcatatcaagaatccaggtgatagagtttttcagatttttatagat |
4666933 |
T |
|
| Q |
201 |
gatagtttggctgaaccaagtgctgatgtgat---aaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaag |
297 |
Q |
| |
|
|||| | ||||||||||||| ||||| ||| | || | ||||||| || | | |||||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
4666932 |
gatattatggctgaaccaagggctgacgtgctttattggagtagtggtgttcgtatggttcctgttcataaggattatgccttgactatggattctcaag |
4666833 |
T |
|
| Q |
298 |
gcggaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaat |
397 |
Q |
| |
|
| || ||| ||||||||||| |||||||||||| || ||||| |||||| ||||| || || | ||| || |||||||| | |||||||| |
|
|
| T |
4666832 |
gagggagccgtcaaattgaaagagttaatctttcaattaagcttcaacgagtaccagaaactgtctttacaaaatacagtgatgtccttcttaatggaat |
4666733 |
T |
|
| Q |
398 |
cgagattttgaaaataagtgataaatataacaatctcgc |
436 |
Q |
| |
|
||||||||| ||||||||||| ||| ||||||||||||| |
|
|
| T |
4666732 |
cgagattttaaaaataagtgacaaaaataacaatctcgc |
4666694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 4663185 - 4662899
Alignment:
| Q |
1 |
ataccattccaaattacattgtaccagaagctgtatacttgaccgctagaagttatggaatggatgagacagaggattacaatgtaacttggaattttga |
100 |
Q |
| |
|
|||||||||||||||||| || ||||||| |||||||||| || || |||| |||||||| | ||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
4663185 |
ataccattccaaattacactgcaccagaaactgtatacttaactgcaagaaattatggaaagtatgtgacagaggattataatgtaacttggaattttga |
4663086 |
T |
|
| Q |
101 |
ggttgattcttcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagat |
200 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||||||||||||||| | |||||| | | | |||||||||| ||||||||||| |||||| |
|
|
| T |
4663085 |
ggttgattcttcttttacatacatggtaaggttacatttttgtgagtttgatccgaatatcataaataaaggtgatagaatgtttcagatttttatagat |
4662986 |
T |
|
| Q |
201 |
gatagtttggctgaaccaagtgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatg |
287 |
Q |
| |
|
|||| ||| | |||| | || |||||||||||||||||| || || | | |||||||||||||||||||||| ||||||||| |
|
|
| T |
4662985 |
gataatttagttgaagaattagccgatgtgataaggtggagtaatggtcgtatggttcctgttcataaggattatggtgtgactatg |
4662899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 353
Target Start/End: Original strand, 4845916 - 4846268
Alignment:
| Q |
1 |
ataccattccaaattacattgtaccagaagctgtatacttgaccgctagaagttatggaatggatgagacagaggattacaatgtaacttggaattttga |
100 |
Q |
| |
|
|||| ||||||||||||| || |||||||||||||||||| || || ||||||||||||| | ||| |||||||||||| ||||||||||||||||| || |
|
|
| T |
4845916 |
atactattccaaattacactgcaccagaagctgtatacttaactgcaagaagttatggaaagtatgtgacagaggattataatgtaacttggaatttcga |
4846015 |
T |
|
| Q |
101 |
ggttgattcttcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagat |
200 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||| || || ||| | | ||||||||| |||||||| || || || |
|
|
| T |
4846016 |
agttgattctagttttacttatatggtaaggttacatttttgtgagtttgatctgcttaccaagaataaaggtgatagagtttttcagatatttatcaat |
4846115 |
T |
|
| Q |
201 |
gatagtttggctgaaccaagtgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaaggcg |
300 |
Q |
| |
|
|||| ||||||||||| | |||||||||||| |||||||||| | | |||||||||||||||||||||| |||| || |||||| | |
|
|
| T |
4846116 |
gatattttggctgaactatatgctgatgtgattttttggagtggtggtaacatgattcctgttcataaggattatgctgtgaaaatctactctcaaaatg |
4846215 |
T |
|
| Q |
301 |
gaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattacca |
353 |
Q |
| |
|
|||||||| ||||||||| |||||||||||| |||||||| |||||||||||| |
|
|
| T |
4846216 |
gaagctctgaaattgaaagagttaatctttcaatcaagcttcaacgattacca |
4846268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 343
Target Start/End: Complemental strand, 4653714 - 4653372
Alignment:
| Q |
1 |
ataccattccaaattacattgtaccagaagctgtatacttgaccgctagaagttatggaatggatgagacagaggattacaatgtaacttggaattttga |
100 |
Q |
| |
|
|||| |||||||||||||| | |||||||||||||||| | || || ||||||||||||||| ||| ||||||||||||||||||||||||||||| || |
|
|
| T |
4653714 |
atacaattccaaattacatcgcaccagaagctgtatacctaactgcgagaagttatggaatgaatgtcacagaggattacaatgtaacttggaatttcga |
4653615 |
T |
|
| Q |
101 |
ggttgattcttcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagat |
200 |
Q |
| |
|
||||| || | |||||||||||||| ||||||||||||||||| |||||||||| |||||| | | ||||||||| || ||||| || ||| || |
|
|
| T |
4653614 |
agttgactcaacatttacttatatggtcaggttacatttttgtgaatttgattggcgtatcaaggataaaggtgatagagttttccagatatttatacat |
4653515 |
T |
|
| Q |
201 |
gatagtttggctgaaccaagtgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaaggcg |
300 |
Q |
| |
|
||| ||||||||||||| |||||||||||| ||||| ||||| ||| ||||||||||||||||||||| ||||||||| ||| ||| | |
|
|
| T |
4653514 |
gatttcttggctgaaccaaatgctgatgtgatttcatggagcaatgctcgtttgattcctgttcataaggattatgttgtgactatgcactctgaagaag |
4653415 |
T |
|
| Q |
301 |
gaagctctcaaattgaaaaagttaatctttcgatcaagctaca |
343 |
Q |
| |
|
||||| |||||||||||| |||||||||| | ||||||||||| |
|
|
| T |
4653414 |
gaagcactcaaattgaaagagttaatcttacaatcaagctaca |
4653372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 3 - 347
Target Start/End: Original strand, 4697093 - 4697437
Alignment:
| Q |
3 |
accattccaaattacattgtaccagaagctgtatacttgaccgctagaagttatggaatggatgagacagaggattacaatgtaacttggaattttgagg |
102 |
Q |
| |
|
||||||| |||||||| || |||||||||||| ||||| || || |||||| |||| |||||||||||||||||| |||||||||||||||||| || | |
|
|
| T |
4697093 |
accattcaaaattacactgcaccagaagctgtgtacttaactgcaagaagtcgtggattggatgagacagaggatttcaatgtaacttggaatttcgaag |
4697192 |
T |
|
| Q |
103 |
ttgattcttcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagatga |
202 |
Q |
| |
|
||||| | ||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||| ||||| || ||||||| | | |
|
|
| T |
4697193 |
ttgatgttggttttacttatatggtaaggttgcatttttgtgagtttgatcagcatatcaaaaatataggtgatagagtctttcaaatattcatagctaa |
4697292 |
T |
|
| Q |
203 |
tagtttggctgaaccaagtgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaaggcgga |
302 |
Q |
| |
|
|| |||||| || || ||||||||||| |||||| | ||||| | |||||||||||||| |||||||| ||| ||||| ||||||| ||| |
|
|
| T |
4697293 |
tactttggcggagataaacgctgatgtgatttcttggagtactactcctatggttcctgttcataaagattatgctgtgtctatgcactctcaagaagga |
4697392 |
T |
|
| Q |
303 |
agctctcaaattgaaaaagttaatctttcgatcaagctacaacga |
347 |
Q |
| |
|
|||||||||||||||| | |||||||||| ||||||||||||||| |
|
|
| T |
4697393 |
agctctcaaattgaaagacttaatctttcaatcaagctacaacga |
4697437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 75 - 345
Target Start/End: Complemental strand, 4643791 - 4643521
Alignment:
| Q |
75 |
gattacaatgtaacttggaattttgaggttgattcttcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtg |
174 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||| | | | | |||| |
|
|
| T |
4643791 |
gatttcaatgtaacttggaattttgaggttgattctggttttacttatatggtaaggttacatttttgtgagtttgatccggatataacaaataaaggtg |
4643692 |
T |
|
| Q |
175 |
atagaagatttcagattttcatagatgatagtttggctgaaccaagtgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggatta |
274 |
Q |
| |
|
||||| |||||||| ||||||||| | | ||||| |||| || || ||||||||| ||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
4643691 |
atagagtctttcagatattcatagataacactttggttgaagaaaaggcggatgtgatagggtggagtggtgctcgtttggttcctgttcataaggatta |
4643592 |
T |
|
| Q |
275 |
tgccgtgactatgggttctcaaggcggaagctctcaaattgaaaaagttaatctttcgatcaagctacaac |
345 |
Q |
| |
|
||| || |||||| | ||||| |||||||||||| |||||| || ||||||||| |||||||| |||| |
|
|
| T |
4643591 |
tgcaatgtctatggactatcaagaaggaagctctcaacttgaaagagctaatctttcaatcaagcttcaac |
4643521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 81 - 345
Target Start/End: Complemental strand, 4672790 - 4672526
Alignment:
| Q |
81 |
aatgtaacttggaattttgaggttgattcttcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaa |
180 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| | ||||||||| |
|
|
| T |
4672790 |
aatgtaacttggaattttgaggttgattcttctttcacttatatggtaaggttacatttttgtgagtttgacaggcttatcattaatacaggtgatagag |
4672691 |
T |
|
| Q |
181 |
gatttcagattttcatagatgatagtttggctgaaccaagtgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgt |
280 |
Q |
| |
|
||||||||||| |||| | | | | ||||||| ||| |||||||| ||||| ||||||||||||| | | ||||||||||||||||||||||| || |
|
|
| T |
4672690 |
cctttcagatttttatagctaacactctggctgaggaaagagctgatgttataagttggagtggtgctcgtatggttcctgttcataaggattatgctgt |
4672591 |
T |
|
| Q |
281 |
gactatgggttctcaaggcggaagctctcaaattgaaaaagttaatctttcgatcaagctacaac |
345 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||| |||||||||||| || ||||| |||| |
|
|
| T |
4672590 |
cactatgtactctcaagaaggaagctctcaaattgaaagagttaatctttctattaagcttcaac |
4672526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 4647625 - 4647561
Alignment:
| Q |
94 |
attttgaggttgattcttcttttacttatatggtaaggttacatttttgtgagtttgattggcatat |
160 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
4647625 |
attttgaagttgattctggttttacttatatggtaaggttac--ttttgtgagtttgattgacatat |
4647561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 456
Target Start/End: Original strand, 4846299 - 4846365
Alignment:
| Q |
387 |
ttgaatggaatcgagattttgaaaataagtgataaatataacaatctcgctggtttgaatcccaacaaac |
456 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
4846299 |
ttgaatggaatcgagattttcaaagtaagtgataaa---aacaatctggctggtatgaatcccaacaaac |
4846365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 436
Target Start/End: Complemental strand, 4643494 - 4643445
Alignment:
| Q |
387 |
ttgaatggaatcgagattttgaaaataagtgataaatataacaatctcgc |
436 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||| ||||||||||||| |
|
|
| T |
4643494 |
ttgaatggaatcgagattttaaaaataagtgacaaaaataacaatctcgc |
4643445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 436
Target Start/End: Complemental strand, 4672495 - 4672435
Alignment:
| Q |
376 |
gtgatgtcacgttgaatggaatcgagattttgaaaataagtgataaatataacaatctcgc |
436 |
Q |
| |
|
|||||||||| || ||||||||||||||||| ||| ||||||||||| |||| |||||||| |
|
|
| T |
4672495 |
gtgatgtcacattaaatggaatcgagattttcaaagtaagtgataaaaataataatctcgc |
4672435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 4697466 - 4697512
Alignment:
| Q |
376 |
gtgatgtcacgttgaatggaatcgagattttgaaaataagtgataaa |
422 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
4697466 |
gtgatgtcacattgaatggcatcgagattttgaaaataaatgataaa |
4697512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4672897 - 4672837
Alignment:
| Q |
1 |
ataccattccaaattacattgtaccagaagctgtatacttgaccgctagaagttatggaat |
61 |
Q |
| |
|
|||||||||||||||||| || |||||||||||| ||| | || || |||||||||||||| |
|
|
| T |
4672897 |
ataccattccaaattacactgcaccagaagctgtttacgtaactgcaagaagttatggaat |
4672837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 350
Target Start/End: Complemental strand, 4647437 - 4647378
Alignment:
| Q |
291 |
tctcaaggcggaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgatta |
350 |
Q |
| |
|
|||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||| |
|
|
| T |
4647437 |
tctcaaggaggaaggaatcaaattgaaagagttaatctttcaatcaagcttcaacgatta |
4647378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 357
Target Start/End: Complemental strand, 4661688 - 4661636
Alignment:
| Q |
305 |
ctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaat |
357 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||| |||| |||| |||||| |
|
|
| T |
4661688 |
ctctcaaattgaaagagttgatctttcaatcaagcttcaaccattatcaaaat |
4661636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 152; Significance: 3e-80; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 436
Target Start/End: Original strand, 18925643 - 18926078
Alignment:
| Q |
1 |
ataccattccaaattacattgtaccagaagctgtatacttgaccgctagaagttatggaatggatgagacagaggattacaatgtaacttggaattttga |
100 |
Q |
| |
|
||||||||||||| |||| | |||||||| ||||||||| || || ||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |
|
|
| T |
18925643 |
ataccattccaaactacacggcaccagaagttgtatacttaactgcaagaagttatggaatggatgcgacaaaggattataatgtaacttggaattttga |
18925742 |
T |
|
| Q |
101 |
ggttgattcttcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagat |
200 |
Q |
| |
|
||||||||| | ||||||||| ||||||| || |||||||| ||||||||||||||||| || | | ||||||||| ||||||||||| |||||| |
|
|
| T |
18925743 |
agttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttatagat |
18925842 |
T |
|
| Q |
201 |
gatagtttggctgaaccaagtgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaaggcg |
300 |
Q |
| |
|
|||| ||||||||||| || |||||||||||| ||||||||||||| | | |||||||||||||||||||||| ||||||||| |||| || | |
|
|
| T |
18925843 |
gataatttggctgaacgaaatgctgatgtgattcattggagtggtgctcgtatggttcctgttcataaggattatgttgtgactatgtactctcgagaag |
18925942 |
T |
|
| Q |
301 |
gaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaatcga |
400 |
Q |
| |
|
||||||| |||||| ||| |||||||||||| || |||||||||||| |||| || ||| | || ||| ||||||| |||||||| ||||| |
|
|
| T |
18925943 |
gaagctcgcaaattaaaagagttaatctttcaataaagctacaacgagcaccagaaaatatctactcaaaataccgtaatgtcacattgaatgggatcga |
18926042 |
T |
|
| Q |
401 |
gattttgaaaataagtgataaatataacaatctcgc |
436 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
18926043 |
gattttgaaaataagtgacaaaaataacaatctcgc |
18926078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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