View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0844_low_9 (Length: 499)

Name: NF0844_low_9
Description: NF0844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0844_low_9
NF0844_low_9
[»] chr7 (70 HSPs)
chr7 (95-289)||(5489045-5489239)
chr7 (285-466)||(20636614-20636795)
chr7 (285-462)||(20638486-20638663)
chr7 (288-462)||(21224484-21224658)
chr7 (288-462)||(27869327-27869501)
chr7 (281-462)||(3562565-3562745)
chr7 (275-462)||(42271318-42271504)
chr7 (290-466)||(17305764-17305940)
chr7 (290-462)||(24597647-24597819)
chr7 (291-462)||(2331015-2331185)
chr7 (288-466)||(48176091-48176268)
chr7 (284-461)||(19919736-19919911)
chr7 (289-462)||(31493910-31494082)
chr7 (290-462)||(19195345-19195517)
chr7 (359-466)||(35337650-35337757)
chr7 (303-466)||(41452377-41452540)
chr7 (288-473)||(18754387-18754572)
chr7 (285-462)||(8526791-8526967)
chr7 (284-466)||(36746631-36746812)
chr7 (287-462)||(11843310-11843484)
chr7 (288-454)||(13577926-13578090)
chr7 (359-465)||(21225677-21225782)
chr7 (288-464)||(44078000-44078176)
chr7 (290-473)||(10655330-10655512)
chr7 (287-468)||(26385260-26385439)
chr7 (368-462)||(10023916-10024010)
chr7 (289-462)||(14624607-14624774)
chr7 (292-462)||(39181939-39182106)
chr7 (361-462)||(5111512-5111611)
chr7 (360-465)||(3403180-3403286)
chr7 (359-466)||(23439662-23439770)
chr7 (387-466)||(39440248-39440328)
chr7 (375-461)||(9157183-9157269)
chr7 (375-433)||(6798075-6798133)
chr7 (375-463)||(3769489-3769578)
chr7 (359-462)||(24464646-24464748)
chr7 (375-462)||(26126339-26126426)
chr7 (360-462)||(4193621-4193722)
chr7 (289-348)||(8527040-8527099)
chr7 (359-459)||(4571478-4571577)
chr7 (361-465)||(23473060-23473165)
chr7 (375-466)||(43251349-43251441)
chr7 (281-348)||(31494156-31494223)
chr7 (405-466)||(9822227-9822289)
chr7 (405-466)||(10724152-10724214)
chr7 (385-450)||(24448187-24448253)
chr7 (286-348)||(26385507-26385569)
chr7 (285-339)||(33237411-33237465)
chr7 (359-466)||(25002778-25002883)
chr7 (292-348)||(13577789-13577845)
chr7 (285-348)||(48175957-48176021)
chr7 (413-463)||(5087118-5087169)
chr7 (289-348)||(11843177-11843236)
chr7 (388-462)||(15681727-15681802)
chr7 (289-348)||(20636864-20636923)
chr7 (285-348)||(24597512-24597575)
chr7 (289-348)||(27869195-27869254)
chr7 (318-348)||(3562461-3562491)
chr7 (413-462)||(6650632-6650682)
chr7 (302-348)||(19919616-19919662)
chr7 (375-461)||(29051704-29051789)
chr7 (371-400)||(5348139-5348168)
chr7 (303-348)||(19493562-19493607)
chr7 (370-466)||(23461149-23461246)
chr7 (283-348)||(24448038-24448103)
chr7 (395-462)||(6798014-6798082)
chr7 (288-348)||(10023784-10023844)
chr7 (375-423)||(15681682-15681730)
chr7 (290-346)||(15681878-15681934)
chr7 (302-346)||(42438034-42438078)
[»] chr3 (56 HSPs)
chr3 (287-462)||(26628157-26628332)
chr3 (288-462)||(27852883-27853057)
chr3 (289-462)||(48907424-48907596)
chr3 (288-462)||(25179576-25179750)
chr3 (285-462)||(3328945-3329122)
chr3 (290-462)||(13080894-13081066)
chr3 (286-461)||(4521950-4522125)
chr3 (289-462)||(8542609-8542782)
chr3 (290-462)||(8339072-8339244)
chr3 (293-466)||(23428747-23428920)
chr3 (290-462)||(22500727-22500898)
chr3 (286-462)||(22447872-22448052)
chr3 (287-462)||(30155277-30155450)
chr3 (289-466)||(10743408-10743583)
chr3 (318-466)||(28173857-28174005)
chr3 (369-462)||(28155014-28155107)
chr3 (302-466)||(25022791-25022952)
chr3 (361-463)||(48860773-48860875)
chr3 (359-466)||(3780950-3781054)
chr3 (359-466)||(46673175-46673282)
chr3 (359-466)||(22416401-22416510)
chr3 (302-466)||(33279713-33279876)
chr3 (359-462)||(26127038-26127139)
chr3 (286-462)||(26633491-26633663)
chr3 (359-466)||(9496344-9496450)
chr3 (369-462)||(34878661-34878754)
chr3 (284-462)||(40836310-40836488)
chr3 (359-462)||(26177088-26177189)
chr3 (359-423)||(20001778-20001842)
chr3 (286-393)||(32960811-32960914)
chr3 (413-466)||(6927593-6927646)
chr3 (413-462)||(32960774-32960823)
chr3 (286-471)||(36311148-36311332)
chr3 (290-461)||(25336358-25336527)
chr3 (292-462)||(4775852-4776023)
chr3 (285-348)||(34878524-34878587)
chr3 (413-466)||(3821004-3821058)
chr3 (283-348)||(26628018-26628083)
chr3 (288-348)||(22447738-22447798)
chr3 (362-461)||(33105013-33105112)
chr3 (289-348)||(20001954-20002012)
chr3 (281-348)||(28173720-28173787)
chr3 (290-348)||(28154882-28154940)
chr3 (287-348)||(1743495-1743556)
chr3 (287-348)||(13081140-13081201)
chr3 (375-458)||(1743334-1743417)
chr3 (359-423)||(46387745-46387808)
chr3 (289-348)||(1743254-1743313)
chr3 (289-348)||(3328812-3328871)
chr3 (289-348)||(26633360-26633418)
chr3 (302-348)||(8338952-8338998)
chr3 (285-343)||(32960640-32960698)
chr3 (303-348)||(4776064-4776109)
chr3 (359-458)||(35201131-35201229)
chr3 (288-348)||(22500594-22500654)
chr3 (288-348)||(25179821-25179881)
[»] chr1 (49 HSPs)
chr1 (288-462)||(24961951-24962125)
chr1 (287-462)||(4059654-4059829)
chr1 (289-462)||(3616798-3616971)
chr1 (281-462)||(29676070-29676251)
chr1 (302-466)||(46432344-46432508)
chr1 (288-462)||(24196259-24196433)
chr1 (302-468)||(24749809-24749976)
chr1 (287-462)||(28920789-28920958)
chr1 (290-466)||(43706782-43706957)
chr1 (289-466)||(19078053-19078228)
chr1 (289-466)||(19125943-19126118)
chr1 (290-462)||(48471995-48472165)
chr1 (287-466)||(51719250-51719427)
chr1 (290-473)||(2425225-2425407)
chr1 (287-466)||(2657640-2657818)
chr1 (360-462)||(4455174-4455277)
chr1 (359-461)||(28750346-28750448)
chr1 (360-468)||(29182126-29182234)
chr1 (359-462)||(16551775-16551879)
chr1 (360-423)||(21148048-21148111)
chr1 (376-462)||(27092984-27093070)
chr1 (375-465)||(47685186-47685276)
chr1 (405-466)||(31084740-31084801)
chr1 (359-454)||(22786099-22786194)
chr1 (287-466)||(18606811-18606990)
chr1 (302-348)||(16551656-16551702)
chr1 (286-348)||(51719119-51719181)
chr1 (287-348)||(16972096-16972157)
chr1 (284-348)||(2657507-2657571)
chr1 (284-348)||(3617044-3617108)
chr1 (285-348)||(2425469-2425532)
chr1 (289-348)||(4059521-4059580)
chr1 (293-348)||(21148193-21148248)
chr1 (302-348)||(28552317-28552363)
chr1 (285-347)||(51685809-51685871)
chr1 (278-343)||(27092841-27092906)
chr1 (291-348)||(43706655-43706712)
chr1 (291-348)||(50334719-50334776)
chr1 (360-466)||(2260506-2260611)
chr1 (375-463)||(26605408-26605494)
chr1 (288-348)||(46432214-46432274)
chr1 (359-464)||(9387762-9387868)
chr1 (361-466)||(21185278-21185380)
chr1 (289-348)||(24196507-24196566)
chr1 (318-348)||(48471891-48471921)
chr1 (375-471)||(16971935-16972032)
chr1 (359-461)||(10684862-10684965)
chr1 (292-348)||(16878931-16878987)
chr1 (284-348)||(24962199-24962263)
[»] chr2 (32 HSPs)
chr2 (289-462)||(11175906-11176079)
chr2 (288-462)||(9051159-9051333)
chr2 (293-462)||(2986689-2986858)
chr2 (287-462)||(18537960-18538135)
chr2 (288-462)||(30714406-30714580)
chr2 (289-460)||(6763851-6764022)
chr2 (288-462)||(15735062-15735236)
chr2 (284-462)||(38716188-38716365)
chr2 (284-466)||(4587854-4588037)
chr2 (288-462)||(25298933-25299106)
chr2 (283-466)||(15700740-15700923)
chr2 (286-466)||(22191042-22191222)
chr2 (359-462)||(9787628-9787731)
chr2 (388-462)||(17368314-17368388)
chr2 (359-471)||(331781-331894)
chr2 (360-471)||(2190605-2190714)
chr2 (378-466)||(4104952-4105040)
chr2 (395-466)||(21494555-21494626)
chr2 (375-462)||(22387200-22387287)
chr2 (360-466)||(28365581-28365686)
chr2 (385-466)||(33199547-33199630)
chr2 (286-348)||(25884174-25884236)
chr2 (359-458)||(36464343-36464441)
chr2 (359-461)||(25884310-25884412)
chr2 (285-348)||(30714270-30714333)
chr2 (385-459)||(1020485-1020559)
chr2 (288-348)||(2986932-2986992)
chr2 (290-348)||(9787803-9787861)
chr2 (359-400)||(15147814-15147854)
chr2 (385-464)||(2123469-2123549)
chr2 (375-462)||(26829221-26829308)
chr2 (413-468)||(28319132-28319188)
[»] chr8 (44 HSPs)
chr8 (289-462)||(17648242-17648415)
chr8 (289-462)||(4518999-4519172)
chr8 (290-462)||(30784396-30784568)
chr8 (290-462)||(8802532-8802703)
chr8 (288-466)||(38630053-38630231)
chr8 (285-462)||(12723393-12723570)
chr8 (285-466)||(19924260-19924441)
chr8 (289-466)||(44146971-44147146)
chr8 (293-462)||(5192403-5192572)
chr8 (287-462)||(4807732-4807908)
chr8 (288-457)||(22452310-22452479)
chr8 (359-462)||(19391519-19391622)
chr8 (290-462)||(33895375-33895546)
chr8 (283-466)||(18881631-18881812)
chr8 (288-430)||(21929967-21930107)
chr8 (318-462)||(21666406-21666549)
chr8 (359-466)||(32400450-32400557)
chr8 (284-455)||(3380193-3380363)
chr8 (287-348)||(19392812-19392873)
chr8 (360-468)||(3208050-3208158)
chr8 (363-466)||(4423157-4423262)
chr8 (415-462)||(23565214-23565261)
chr8 (289-348)||(5192271-5192330)
chr8 (285-462)||(7117246-7117422)
chr8 (302-348)||(15869349-15869395)
chr8 (359-462)||(1824676-1824777)
chr8 (359-462)||(1859121-1859222)
chr8 (283-348)||(33895619-33895684)
chr8 (278-348)||(4518857-4518927)
chr8 (279-348)||(44147216-44147285)
chr8 (288-348)||(4807598-4807658)
chr8 (383-462)||(41385622-41385702)
chr8 (361-462)||(18253018-18253117)
chr8 (426-468)||(41688236-41688278)
chr8 (287-348)||(18881501-18881562)
chr8 (287-344)||(32968453-32968510)
chr8 (287-348)||(38612216-38612277)
chr8 (287-348)||(38613417-38613478)
chr8 (279-344)||(38974784-38974849)
chr8 (279-344)||(39005882-39005947)
chr8 (286-338)||(2053145-2053197)
chr8 (415-462)||(16233581-16233629)
chr8 (288-348)||(19391386-19391445)
chr8 (284-348)||(30784259-30784323)
[»] chr6 (44 HSPs)
chr6 (289-466)||(32451725-32451902)
chr6 (289-461)||(31210793-31210965)
chr6 (287-465)||(24051006-24051183)
chr6 (290-462)||(26710439-26710611)
chr6 (288-462)||(4597537-4597711)
chr6 (290-462)||(24603361-24603533)
chr6 (287-462)||(18791355-18791529)
chr6 (290-466)||(25819685-25819860)
chr6 (287-466)||(22968283-22968460)
chr6 (287-466)||(23819933-23820110)
chr6 (304-462)||(15298500-15298657)
chr6 (286-466)||(8412754-8412934)
chr6 (285-462)||(34833920-34834097)
chr6 (287-462)||(14572310-14572483)
chr6 (359-466)||(3118748-3118855)
chr6 (290-423)||(18749299-18749432)
chr6 (369-462)||(35102623-35102716)
chr6 (360-466)||(19282339-19282445)
chr6 (290-454)||(22269410-22269570)
chr6 (289-453)||(32682419-32682581)
chr6 (291-462)||(4013798-4013968)
chr6 (359-457)||(4370967-4371065)
chr6 (385-462)||(18749228-18749305)
chr6 (360-468)||(16415456-16415564)
chr6 (379-471)||(24615817-24615908)
chr6 (359-468)||(12427300-12427411)
chr6 (405-466)||(2636891-2636953)
chr6 (360-466)||(26240025-26240133)
chr6 (369-462)||(9241732-9241824)
chr6 (289-344)||(35102713-35102768)
chr6 (417-466)||(23124848-23124898)
chr6 (283-347)||(6842327-6842391)
chr6 (303-423)||(2058993-2059111)
chr6 (303-348)||(15298730-15298775)
chr6 (405-464)||(12291547-12291607)
chr6 (426-462)||(20863860-20863896)
chr6 (284-348)||(23124932-23124996)
chr6 (288-348)||(35102489-35102549)
chr6 (302-348)||(4597417-4597463)
chr6 (303-348)||(12291430-12291475)
chr6 (359-400)||(20863891-20863932)
chr6 (286-346)||(8821869-8821929)
chr6 (361-462)||(14195631-14195732)
chr6 (288-348)||(18749095-18749155)
[»] chr4 (52 HSPs)
chr4 (289-462)||(13397807-13397980)
chr4 (285-466)||(41877156-41877333)
chr4 (290-462)||(4357252-4357424)
chr4 (287-468)||(5304473-5304652)
chr4 (285-466)||(35475286-35475465)
chr4 (281-466)||(9195792-9195975)
chr4 (284-466)||(55780381-55780562)
chr4 (284-466)||(55844561-55844742)
chr4 (290-463)||(25011735-25011908)
chr4 (288-466)||(43793759-43793936)
chr4 (359-461)||(15058951-15059053)
chr4 (284-461)||(41034629-41034807)
chr4 (290-466)||(4433311-4433485)
chr4 (290-459)||(2931321-2931490)
chr4 (289-462)||(6789090-6789263)
chr4 (290-462)||(52838231-52838399)
chr4 (359-461)||(13826552-13826653)
chr4 (288-461)||(1588546-1588718)
chr4 (283-466)||(19232471-19232655)
chr4 (287-466)||(45633435-45633613)
chr4 (384-468)||(15795411-15795495)
chr4 (302-462)||(27018229-27018386)
chr4 (288-348)||(18259357-18259417)
chr4 (289-400)||(25618790-25618901)
chr4 (357-466)||(23362500-23362607)
chr4 (360-460)||(4098726-4098827)
chr4 (380-468)||(2715843-2715930)
chr4 (318-465)||(9397219-9397367)
chr4 (284-454)||(15734394-15734562)
chr4 (281-468)||(24626346-24626529)
chr4 (375-462)||(51291301-51291389)
chr4 (288-348)||(43793629-43793689)
chr4 (284-348)||(45633682-45633746)
chr4 (302-348)||(4357497-4357543)
chr4 (289-343)||(24626221-24626275)
chr4 (413-462)||(25618759-25618809)
chr4 (375-425)||(48158681-48158731)
chr4 (378-459)||(43336075-43336156)
chr4 (284-348)||(4098902-4098966)
chr4 (288-348)||(4433181-4433241)
chr4 (416-466)||(33978856-33978908)
chr4 (289-344)||(3927665-3927720)
chr4 (284-339)||(4099044-4099099)
chr4 (288-339)||(20919333-20919384)
chr4 (289-348)||(25011980-25012039)
chr4 (302-348)||(2715731-2715777)
chr4 (289-347)||(3928902-3928960)
chr4 (290-348)||(9397435-9397493)
chr4 (303-348)||(47869899-47869944)
chr4 (288-348)||(13826418-13826478)
chr4 (285-337)||(17138540-17138592)
chr4 (282-346)||(25685867-25685931)
[»] scaffold0179 (2 HSPs)
scaffold0179 (289-462)||(5781-5954)
scaffold0179 (288-348)||(5648-5708)
[»] scaffold0025 (2 HSPs)
scaffold0025 (289-462)||(61813-61986)
scaffold0025 (284-462)||(19279-19454)
[»] scaffold0001 (1 HSPs)
scaffold0001 (286-468)||(142073-142254)
[»] chr5 (45 HSPs)
chr5 (290-462)||(18695004-18695175)
chr5 (285-462)||(245591-245766)
chr5 (289-462)||(26639169-26639342)
chr5 (284-462)||(23765522-23765699)
chr5 (284-462)||(23815370-23815547)
chr5 (288-473)||(38408627-38408811)
chr5 (288-463)||(36641141-36641316)
chr5 (284-466)||(40428767-40428947)
chr5 (288-462)||(25557007-25557180)
chr5 (357-466)||(10379349-10379457)
chr5 (318-462)||(16901129-16901271)
chr5 (359-468)||(19169412-19169521)
chr5 (359-466)||(31055442-31055549)
chr5 (302-466)||(16307604-16307769)
chr5 (288-465)||(10293216-10293391)
chr5 (289-428)||(8645796-8645935)
chr5 (289-454)||(17704727-17704887)
chr5 (361-466)||(38476597-38476703)
chr5 (359-466)||(7187260-7187365)
chr5 (361-468)||(34125130-34125238)
chr5 (292-462)||(7835722-7835881)
chr5 (360-466)||(23040076-23040182)
chr5 (293-462)||(37961380-37961549)
chr5 (374-462)||(15885297-15885384)
chr5 (360-466)||(2373215-2373321)
chr5 (289-400)||(31648055-31648165)
chr5 (375-465)||(462851-462941)
chr5 (283-348)||(20654040-20654105)
chr5 (413-468)||(8673982-8674038)
chr5 (375-462)||(17825629-17825716)
chr5 (284-462)||(35302046-35302223)
chr5 (360-429)||(41663689-41663756)
chr5 (287-348)||(31055312-31055373)
chr5 (288-348)||(18695248-18695308)
chr5 (285-341)||(31648237-31648293)
chr5 (289-348)||(16900996-16901055)
chr5 (288-343)||(23765418-23765473)
chr5 (288-343)||(23815266-23815321)
chr5 (305-348)||(24025036-24025079)
chr5 (286-348)||(2373391-2373453)
chr5 (425-466)||(38322335-38322377)
chr5 (302-348)||(40428651-40428697)
chr5 (375-457)||(20653905-20653987)
chr5 (284-348)||(31576487-31576551)
chr5 (284-348)||(38408873-38408937)
[»] scaffold0419 (2 HSPs)
scaffold0419 (290-462)||(3092-3264)
scaffold0419 (302-348)||(2973-3019)
[»] scaffold0607 (2 HSPs)
scaffold0607 (288-466)||(2177-2353)
scaffold0607 (289-348)||(2047-2106)
[»] scaffold1202 (1 HSPs)
scaffold1202 (287-466)||(1902-2080)
[»] scaffold0062 (2 HSPs)
scaffold0062 (283-466)||(49652-49835)
scaffold0062 (283-466)||(62191-62374)
[»] scaffold0087 (1 HSPs)
scaffold0087 (289-462)||(25096-25269)
[»] scaffold0060 (1 HSPs)
scaffold0060 (281-466)||(66174-66350)
[»] scaffold0406 (1 HSPs)
scaffold0406 (290-461)||(1997-2162)
[»] scaffold0267 (1 HSPs)
scaffold0267 (359-461)||(3701-3801)
[»] scaffold1875 (2 HSPs)
scaffold1875 (359-466)||(884-991)
scaffold1875 (288-348)||(754-814)
[»] scaffold0150 (1 HSPs)
scaffold0150 (370-465)||(5911-6007)
[»] scaffold0002 (4 HSPs)
scaffold0002 (366-468)||(455102-455205)
scaffold0002 (360-466)||(455000-455107)
scaffold0002 (291-348)||(455274-455331)
scaffold0002 (284-348)||(436354-436418)
[»] scaffold0683 (1 HSPs)
scaffold0683 (288-414)||(5288-5413)
[»] scaffold0103 (1 HSPs)
scaffold0103 (405-466)||(3056-3118)
[»] scaffold0007 (1 HSPs)
scaffold0007 (409-462)||(250650-250703)
[»] scaffold0174 (1 HSPs)
scaffold0174 (361-462)||(29789-29888)
[»] scaffold0291 (1 HSPs)
scaffold0291 (360-461)||(9992-10092)
[»] scaffold0064 (1 HSPs)
scaffold0064 (413-462)||(54492-54542)
[»] scaffold0024 (1 HSPs)
scaffold0024 (313-462)||(43956-44102)
[»] scaffold0014 (1 HSPs)
scaffold0014 (378-462)||(112214-112299)
[»] scaffold0171 (1 HSPs)
scaffold0171 (426-466)||(9168-9208)


Alignment Details
Target: chr7 (Bit Score: 166; Significance: 1e-88; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 5489239 - 5489045
Alignment:
Q  95 aggaagatgtgtttggtgtgaagatgtcttgatcgtcatcatcatcaaccaattcttcatcttgatggcctttagcagacctagccattttccttttctt 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5489239 aggaagatgtgtttggtgtgaagatgtcttgatcgtcatcatcatcgaccaattcttcatcttgatggcctttagcagacctagccattttccttttctt 5489140  T
Q  195 gaacaaattttctcgagaaaatccaaagttagagnnnnnnntaatagtgttagcttaggaatgtgtgcacatcatgatgcaattagttattttta 289  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5489139 gaacaaattttctcgagaaaatccaaagttagagaaaaaaataatagtgttagcttagtaatgtgtgcacatcatgatgcaattagttattttta 5489045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 285 - 466
Target Start/End: Original strand, 20636614 - 20636795
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagga 384  Q
    |||||||||||||||| ||||| ||||||||| ||| |||||||||||||||||||||||||||        | |||||||||||||||||||||||||     
T  20636614 ttttaggctaaacttcactttttgccctctaagttttaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttaggg 20636713  T
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20636714 aaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 20636795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 285 - 462
Target Start/End: Original strand, 20638486 - 20638663
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagga 384  Q
    |||||||||||||||| ||||| ||||||||| ||| |||||||||||||||||||||||||||        | |||||||||||||||||||||||||     
T  20638486 ttttaggctaaacttcactttttgccctctaagttttaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttaggg 20638585  T
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20638586 aaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 20638663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 288 - 462
Target Start/End: Complemental strand, 21224658 - 21224484
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||          ||||||||||||||||||||||||| |||    
T  21224658 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctgttaaaaaaaaaggcaaaagtgaccccctatgtttagggaaa 21224559  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21224558 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 21224484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 288 - 462
Target Start/End: Complemental strand, 27869501 - 27869327
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    |||| |||||||| ||||||||||||||| ||||||||||||||||||||||  |||||||        | ||||||||||||||||||||||||| |||    
T  27869501 taggttaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggagccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaa 27869402  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27869401 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 27869327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 281 - 462
Target Start/End: Complemental strand, 3562745 - 3562565
Alignment:
Q  281 ttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgttt 380  Q
    ||||| ||||| |||||||| ||||||| ||||||| |||||||||||| ||||||||||||||||||        | |||||||||||||| |||||||    
T  3562745 ttattcttaggttaaacttcacttttcgtcctctaagtttcaaaatgttacgattttggccccctattaaaaaaaatggcaaaagtgacccc-tatgttt 3562647  T
Q  381 aggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3562646 agggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 3562565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 275 - 462
Target Start/End: Original strand, 42271318 - 42271504
Alignment:
Q  275 aattagttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccct 374  Q
    ||||| || ||||| ||||||| |||  |||||||||||||| |||||||||||||||||||||||| ||||||        | ||||||||||||||||    
T  42271318 aattaattcttttttggctaaatttcatttttcgccctctaagtttcaaaatgttgcgattttggcctcctattaaaaaaa-tggcaaaagtgaccccct 42271416  T
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  42271417 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatgtttacaaaaagttgcgattatg 42271504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 290 - 466
Target Start/End: Original strand, 17305764 - 17305940
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaat 388  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||         | |||||||||||||| |||||||||||||||    
T  17305764 ggctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaaatggcaaaagtgacccc-tatgtttaggaaaat 17305862  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||    
T  17305863 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatttttacaaaaagttgtgattatgaccc 17305940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 290 - 462
Target Start/End: Complemental strand, 24597819 - 24597647
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||||||| |||||||||        | |||||||| |||||||||||||||| |||||    
T  24597819 ggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgtccccctattaaaaaaaatggcaaaagtaaccccctatgtttagggaaata 24597720  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||| || ||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  24597719 tgctcttttgacctcctaacataagggaaatatgttttttgaccccttctctttacaaaaagttgcgattatg 24597647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 291 - 462
Target Start/End: Original strand, 2331015 - 2331185
Alignment:
Q  291 gctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatat 390  Q
    |||||||||| ||||||| ||||||| ||| |||||||||| ||||||||||| ||||        | ||||||||||||||||||||||||| ||||||    
T  2331015 gctaaacttcacttttcgtcctctaagttttaaaatgttgcaattttggccccttattaaaaaaa-tggcaaaagtgaccccctatgtttagggaaatat 2331113  T
Q  391 gctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||| || ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  2331114 gctcttttgacctcctaacataagggaaatatgctttttgactccttatctttacaaaaagttgcgattatg 2331185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 288 - 466
Target Start/End: Complemental strand, 48176268 - 48176091
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    |||||||||||   |||||||||| |||| |||||||||||||||||||||||||||||||        | |||||||| || ||||||||||||| |||    
T  48176268 taggctaaactctacttttcgccccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtaactccctatgtttagggaaa 48176169  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  48176168 tatgctcttttgaccc-ctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 48176091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 284 - 461
Target Start/End: Complemental strand, 19919911 - 19919736
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagg 383  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||          ||||||||||||||| |||||||||    
T  19919911 tttttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctattaaaaaaaaaggcaaaagtgaccccc-atgtttagg 19919813  T
Q  384 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattat 461  Q
    ||| ||||||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||||||| ||||||    
T  19919812 aaa-tatgctcttttgacctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgtgattat 19919736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 289 - 462
Target Start/End: Original strand, 31493910 - 31494082
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||| | ||||||| || |||| |||||||||||| ||||||||||||||||||        | |||||||||||||| |||||||||| ||||    
T  31493910 aggctaaactccacttttcggcccctaagtttcaaaatgttacgattttggccccctattaacaaaaatggcaaaagtgacccc-tatgtttagggaaat 31494008  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||| | |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  31494009 atgctcttttgaccctctaacataaggaaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 31494082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 290 - 462
Target Start/End: Complemental strand, 19195517 - 19195345
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||| |||||| |||||||| ||| |||||||||| |||||| |||||||||        | ||||||||||||||||||||||||| |||||    
T  19195517 ggctaaacttcacttttcaccctctaagttttaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 19195418  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
     |||||||||| || ||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  19195417 cgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgtgattatg 19195345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 359 - 466
Target Start/End: Complemental strand, 35337757 - 35337650
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35337757 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 35337658  T
Q  459 tatgaccc 466  Q
    ||||||||    
T  35337657 tatgaccc 35337650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 303 - 466
Target Start/End: Complemental strand, 41452540 - 41452377
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagc 402  Q
    |||||| ||||||| |||||||||||||  ||||||||||||||||        | |||||||||||||| |||||||||| |||||| ||||| ||| |    
T  41452540 ttttcgtcctctaagtttcaaaatgttgtaattttggccccctattaaaaaaaatggcaaaagtgaccccttatgtttagggaaatatactcttctgacc 41452441  T
Q  403 ttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41452440 tcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 41452377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 288 - 473
Target Start/End: Complemental strand, 18754572 - 18754387
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    |||| |||||| | |||||||||| |||| |||||||||||||||||||||| ||||||||        | |||||||||| || ||||||||||| |||    
T  18754572 taggttaaactccacttttcgccccctaagtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaaaagtgatcctctatgtttagggaaa 18754473  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccatattct 473  Q
    ||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||| ||| ||||    
T  18754472 tatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaatgttgcgattatgacacattttct 18754387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 285 - 462
Target Start/End: Original strand, 8526791 - 8526967
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagga 384  Q
    |||||||||||| ||| |||||| |||||||| ||||||||| |||| |||||| |||||||||        | |||||| |||||||||||||||||||    
T  8526791 ttttaggctaaatttcacttttcaccctctaagtttcaaaattttgcaattttgaccccctattaataaaaatggcaaaaatgaccccctatgtttagga 8526890  T
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||| ||||| || ||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||||    
T  8526891 aaatatgctcatttgacctcctaacataagggaaatatgctttttgacc-cctatttttacaaaaagttgcaattatg 8526967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 284 - 466
Target Start/End: Complemental strand, 36746812 - 36746631
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagg 383  Q
    ||||| ||||||||| | |||||||||| |||  ||| |||||||||| ||||||||||||||||          |||||||| |||| |||||||||||    
T  36746812 ttttttggctaaactacacttttcgccc-ctatgttttaaaatgttgcaattttggccccctattaaaaaaaaaggcaaaagtaacccactatgtttagg 36746714  T
Q  384 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
     |||||||||||||||| || |||||||||| ||||||||| |||| ||| ||||||||||||||||||||||||||||||||    
T  36746713 gaaatatgctcttttgacctcctaacataagagaaatatgccttttaaccccttatctttacaaaaagttgcgattatgaccc 36746631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 287 - 462
Target Start/End: Complemental strand, 11843484 - 11843310
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    ||||||||||||   |||||||| |  ||| ||||||||||||||||||||| |||||||||        | |||||||||||| |||||||||||| ||    
T  11843484 ttaggctaaactctacttttcgctccttaagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgacctcctatgtttagggaa 11843385  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||||| |  ||||||||||| ||||||||||||||||| |||||| |||||||||||||| ||||||    
T  11843384 atatgctcttttgaccc-ctaacataaggaaaatatgctttttgaccccttatccttacaaaaagttgcaattatg 11843310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 288 - 454
Target Start/End: Complemental strand, 13578090 - 13577926
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    |||||||||||   |||||||||| |||| ||||||||||||||||||||| ||| |||||        | |||||||||||||| |||||||| | |||    
T  13578090 taggctaaactctacttttcgccccctaagtttcaaaatgttgcgattttgaccctctattaaaaaaaatggcaaaagtgacccc-tatgtttaaggaaa 13577992  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttg 454  Q
    ||||||||||||| |  |||||||||||||||||||||||||||||  |||||| ||||||||||||    
T  13577991 tatgctcttttgaccc-ctaacataagggaaatatgctttttgaccctttatctatacaaaaagttg 13577926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 359 - 465
Target Start/End: Complemental strand, 21225782 - 21225677
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||| ||||| ||||||||||| |||||||||||||||| |  ||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||    
T  21225782 gcaaaagcgaccctctatgtttagggaaatatgctcttttgaccc-ctaacataagggaaatatgctatttgacccctcgtctttacaaaaagttgcgat 21225684  T
Q  459 tatgacc 465  Q
    |||||||    
T  21225683 tatgacc 21225677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 288 - 464
Target Start/End: Complemental strand, 44078176 - 44078000
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||| | ||||| | ||||||| ||| |||| |||||||||||| |||||||||        | || |||||||||    ||||||||| |||    
T  44078176 taggctaaactgcactttt-gtcctctaagttttaaaacgttgcgattttgaccccctatttaaaaaaatggcgaaagtgacctatcatgtttagggaaa 44078078  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttaca-aaaagttgcgattatgac 464  Q
    ||||||||||||| || |||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  44078077 tatgctcttttgacctcctaacataagagaaatatgttttttgaccccttatctttacaaaaaagttgcgattatgac 44078000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 290 - 473
Target Start/End: Original strand, 10655330 - 10655512
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||| | ||||| |||| |||| ||| ||||||||||  |||||||||| ||||        | |||||| ||| |||||||||||||| |||||    
T  10655330 ggctaaactccactttttgccccctaagttttaaaatgttgcagttttggccccttattaaaaaaaattgcaaaaatgatcccctatgtttagggaaata 10655429  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccatattct 473  Q
    ||||||||| | |  |||| ||||| |||||||  ||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  10655430 tgctcttttaatcccctaatataagagaaatatt-tttttaaccccttatctttacaaaaagttgcgattatgacccattttct 10655512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 468
Target Start/End: Original strand, 26385260 - 26385439
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    |||||||||||| | ||||||| || |||||||||||||| ||||| |||||| ||||||||        | |||||||||||||   ||||||||| ||    
T  26385260 ttaggctaaactgcacttttcgtcccctaaatttcaaaatattgcgtttttggtcccctattaaaaaa--tggcaaaagtgacccatcatgtttagggaa 26385357  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgacccat 468  Q
    ||||||| |||||| |  |||||||||| |||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  26385358 atatgctattttgaccc-ctaacataagagaaatatgatattttgacctcttatcttctcaaaaagttgcgattatggcccat 26385439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 462
Target Start/End: Complemental strand, 10024010 - 10023916
Alignment:
Q  368 accccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||||||| |||||||||||||||| |  || |||||||| ||||||  ||||||||| ||||||||||||||||||||||| ||||    
T  10024010 accccctatgtttagggaaatatgctcttttgacccccttacataaggaaaatattttttttgaccccttatctttacaaaaagttgcgaatatg 10023916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 289 - 462
Target Start/End: Original strand, 14624607 - 14624774
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||| | ||||||| || |||| ||||||||| |||||||||||||||| ||||        | |||||||| ||||   ||||||||||||||    
T  14624607 aggctaaactacacttttcgtcccctaagtttcaaaatattgcgattttggcccc-tattaaaaaa--tggcaaaagtaaccca--atgtttaggaaaat 14624701  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||| |   ||||||||||||||||| ||||||||||  |||||||||||||||||||| ||||||    
T  14624702 atgctcttttgaccca-taacataagggaaatatactttttgaccctttatctttacaaaaagttgcaattatg 14624774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 292 - 462
Target Start/End: Original strand, 39181939 - 39182106
Alignment:
Q  292 ctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatg 391  Q
    ||||||| | ||||| |||||| || ||| |||||||||||||||||||| ||||||        | |||||| |||||||  ||||||||| |||||||    
T  39181939 ctaaactgcacttttggccctccaagttttaaaatgttgcgattttggcctcctattaaaaaaaatggcaaaaatgacccc--atgtttagggaaatatg 39182036  T
Q  392 ctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||| | |  ||||||||||||||||| | |||||||| ||||||||  ||||||||||||||||||    
T  39182037 ctcttttgaccat--aacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatg 39182106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 361 - 462
Target Start/End: Original strand, 5111512 - 5111611
Alignment:
Q  361 aaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgatt 459  Q
    ||||||||||||  ||||||||||||||||| |||||||| |  ||||||||||||||||||| | |||||||| ||||||||  |||||||||||||||    
T  5111512 aaaagtgacccc--atgtttaggaaaatatgttcttttgaccc-ctaacataagggaaatatgatattttgaccccttatcttctcaaaaagttgcgatt 5111608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 360 - 465
Target Start/End: Complemental strand, 3403286 - 3403180
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 458  Q
    |||||||||||||  |||| ||||||||||||||||||||| |  ||||||||||||||||||| | |||||| | ||||| ||  |||||| |||||||    
T  3403286 caaaagtgacccctcatgtataggaaaatatgctcttttgaccccctaacataagggaaatatgatcttttgatcccttatgttctcaaaaacttgcgat 3403187  T
Q  459 tatgacc 465  Q
    |||||||    
T  3403186 tatgacc 3403180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 466
Target Start/End: Original strand, 23439662 - 23439770
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 457  Q
    ||||||||||| ||| ||||||| | ||||||| | ||||||   |||||| ||||||||||||||| |||||| | |||||||||  ||||||||||||    
T  23439662 gcaaaagtgactccccatgtttaaggaaatatgatattttgactctctaacttaagggaaatatgctcttttgatcccttatcttttaaaaaagttgcga 23439761  T
Q  458 ttatgaccc 466  Q
    |||||||||    
T  23439762 ttatgaccc 23439770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 387 - 466
Target Start/End: Complemental strand, 39440328 - 39440248
Alignment:
Q  387 atatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||| |||||||| || ||||||||||||||||||| | |||||| | ||||||||| ||||||||||||||||||||||    
T  39440328 atatgatcttttgacctcctaacataagggaaatatgatcttttgatcccttatcttttcaaaaagttgcgattatgaccc 39440248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 375 - 461
Target Start/End: Complemental strand, 9157269 - 9157183
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattat 461  Q
    |||||||||||||||||||||||||| |  |||||||||| |||||||| | |||||||| ||||||||  |||||||||||||||||    
T  9157269 atgtttaggaaaatatgctcttttga-cccctaacataagtgaaatatgatcttttgaccacttatcttctcaaaaagttgcgattat 9157183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 433
Target Start/End: Complemental strand, 6798133 - 6798075
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacc 433  Q
    ||||||||| |||||||||||||||| | |||||||||||||||||||| |||||||||    
T  6798133 atgtttagggaaatatgctcttttgaccctctaacataagggaaatatgatttttgacc 6798075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 375 - 463
Target Start/End: Original strand, 3769489 - 3769578
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttac-aaaaagttgcgattatga 463  Q
    ||||||||  ||||||||| |||||| |   ||||||| | |||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  3769489 atgtttagagaaatatgcttttttgaccccttaacatatgagaaatatgctttttgatctcttatctttacaaaaaagttgcgattatga 3769578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 462
Target Start/End: Original strand, 24464646 - 24464748
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 457  Q
    |||| |||||||||  ||||||||| ||||||| |||||||| |  ||||||||||||||||||| | |||||||| ||||||||  ||||| |||||||    
T  24464646 gcaagagtgacccc--atgtttagggaaatatgttcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaatgttgcga 24464743  T
Q  458 ttatg 462  Q
    |||||    
T  24464744 ttatg 24464748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 375 - 462
Target Start/End: Original strand, 26126339 - 26126426
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||| ||||||||| |||||| |  ||||||||||||||||||| | |||||||| ||||||||  ||||||||||||||||||    
T  26126339 atgtttagggaaatatgcttttttgaccc-ctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatg 26126426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 462
Target Start/End: Original strand, 4193621 - 4193722
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||| |  ||||||| |||||||||||||||| | | ||||||||| |||||||| | |||||||| ||||||||| ||||||||||| ||    
T  4193621 caaaagtgacccc-tgcgtttagggaaatatgctcttttgaccct-taacataagagaaatatgatcttttgaccccttatcttttcaaaaagttgcaat 4193718  T
Q  459 tatg 462  Q
    ||||    
T  4193719 tatg 4193722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 8527099 - 8527040
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||| | | |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  8527099 aggctaaagtgcacttttcgccccctatatttcaaaatgttgcgattttggccccctatt 8527040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 459
Target Start/End: Complemental strand, 4571577 - 4571478
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 457  Q
    |||||||||||||   ||||||||| |||||||||||||| | |   |||||||||||||||||| | |||||||| ||||||||  |||||||||||||    
T  4571577 gcaaaagtgaccca--atgtttagggaaatatgctctttttaccccataacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcga 4571480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 465
Target Start/End: Original strand, 23473060 - 23473165
Alignment:
Q  361 aaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgatt 459  Q
    ||||||||| ||| ||||||| | |||| || | |||||| | |||||| ||||||||||||||| |||||   |||||||||| |||||||||| ||||    
T  23473060 aaaagtgactccccatgtttaaggaaatgtgttattttgaccctctaacttaagggaaatatgctcttttggtatcttatcttttcaaaaagttgtgatt 23473159  T
Q  460 atgacc 465  Q
    ||||||    
T  23473160 atgacc 23473165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 43251349 - 43251441
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||||||||| | ||||||||| | |||||||||||||||||||| | |||||||   |||||||  ||||||||| |||||| |||||    
T  43251349 atgtttaggaaaatgtactcttttgaccctctaacataagggaaatatgatcttttgactctttatcttctcaaaaagttacgattaagaccc 43251441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 348
Target Start/End: Complemental strand, 31494223 - 31494156
Alignment:
Q  281 ttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||| | ||||||||| |  ||||||| |||||  |||||||||||||||||||||||||||||||    
T  31494223 ttatttattggctaaactgcatttttcgcactctatgtttcaaaatgttgcgattttggccccctatt 31494156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 466
Target Start/End: Complemental strand, 9822289 - 9822227
Alignment:
Q  405 ctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||||||||||| | | |||||||| ||||||||  ||||||||||||||||||||||    
T  9822289 ctaacataagggaaatacgatcttttgaccccttatcttctcaaaaagttgcgattatgaccc 9822227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 466
Target Start/End: Complemental strand, 10724214 - 10724152
Alignment:
Q  405 ctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||||||||||| | | |||||||| ||||||||  ||||||||||||||||||||||    
T  10724214 ctaacataagggaaatacgatcttttgaccccttatcttctcaaaaagttgcgattatgaccc 10724152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 24448253 - 24448187
Alignment:
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgctttt-tgacctcttatctttacaaaaa 450  Q
    ||||||||| |||||| |  ||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  24448253 aaatatgcttttttgaccccctaacataagggaaatatgtttttatgaccccttatctttacaaaaa 24448187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 26385569 - 26385507
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||| |||||| | ||||  |||| |||| |||||||||||||||||||||||||||||||    
T  26385569 tttaggataaactgcactttctgccccctaagtttcaaaatgttgcgattttggccccctatt 26385507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 339
Target Start/End: Original strand, 33237411 - 33237465
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttgg 339  Q
    ||||||||||||||   |||||| |||||||||||| ||||||||||||||||||    
T  33237411 ttttaggctaaactgtacttttcaccctctaaattttaaaatgttgcgattttgg 33237465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 466
Target Start/End: Original strand, 25002778 - 25002883
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 457  Q
    |||||| |||||||  ||||||||| ||| |||||||||||| |  ||||||||| ||||||||| | |||||||| ||||||||  || ||| ||||||    
T  25002778 gcaaaaatgacccc--atgtttagggaaacatgctcttttgaccc-ctaacataaaggaaatatgatcttttgaccccttatcttctcataaatttgcga 25002874  T
Q  458 ttatgaccc 466  Q
    |||||||||    
T  25002875 ttatgaccc 25002883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 348
Target Start/End: Original strand, 13577789 - 13577845
Alignment:
Q  292 ctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||| | ||| |||| |||||  |||||||||||||||||||||||||||||||    
T  13577789 ctaaactgcacttctcgctctctatgtttcaaaatgttgcgattttggccccctatt 13577845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 48175957 - 48176021
Alignment:
Q  285 ttttaggctaaacttccctttt-cgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||| | ||||| ||||| |||  ||||| |||||||||||||||||||||||||    
T  48175957 ttttaggctaaactgcactttttcgccccctatgtttcataatgttgcgattttggccccctatt 48176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 463
Target Start/End: Original strand, 5087118 - 5087169
Alignment:
Q  413 agggaaatatgcttttt-gacctcttatctttacaaaaagttgcgattatga 463  Q
    ||||||||||| ||||| |||| ||||||||| |||||||||||||||||||    
T  5087118 agggaaatatgattttttgaccccttatcttttcaaaaagttgcgattatga 5087169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 11843177 - 11843236
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | ||| |||||| |||  ||||||||||||||||||||||| |||||||    
T  11843177 aggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggctccctatt 11843236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 15681727 - 15681802
Alignment:
Q  388 tatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||| |||||||| |  |||||||||||||| |||| | |||||||| ||||||||  ||||||||||||||||||    
T  15681727 tatgatcttttgaccccctaacataagggaactatgatcttttgaccccttatcttgtcaaaaagttgcgattatg 15681802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 20636923 - 20636864
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||| | | |||||||||| |||  ||||||||||||||||||||| |||||||||    
T  20636923 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctatt 20636864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 24597512 - 24597575
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| | | |||||||||  |||  ||||||||||||| |||||||||||||||||    
T  24597512 ttttaggctaaagtgcacttttcgcctcctatgtttcaaaatgttgtgattttggccccctatt 24597575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 27869195 - 27869254
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||| | | |||||||||| |||  ||||||||||||||||||||| |||||||||    
T  27869195 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctatt 27869254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 348
Target Start/End: Original strand, 3562461 - 3562491
Alignment:
Q  318 tttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||||||||||||||||||||    
T  3562461 tttcaaaatgttgcgattttggccccctatt 3562491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 6650632 - 6650682
Alignment:
Q  413 agggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| |||||||| ||||||||  ||||||||||||||||||    
T  6650632 agggaaatatgctcttttgaccccttatcttctcaaaaagttgcgattatg 6650682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 19919616 - 19919662
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| ||| |||| |||||||||||||||||||||| ||||    
T  19919616 cttttcgccccctatattttaaaatgttgcgattttggccccttatt 19919662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 461
Target Start/End: Original strand, 29051704 - 29051789
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattat 461  Q
    |||||||| ||||||||||| ||||| |   ||| ||||| |||| ||| ||||||||| ||||||||  |||||||||||||||||    
T  29051704 atgtttagaaaaatatgctcctttgaccca-taatataagagaaaaatgatttttgaccccttatcttctcaaaaagttgcgattat 29051789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 400
Target Start/End: Original strand, 5348139 - 5348168
Alignment:
Q  371 ccctatgtttaggaaaatatgctcttttga 400  Q
    ||||||||||||||||||||||||||||||    
T  5348139 ccctatgtttaggaaaatatgctcttttga 5348168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 19493607 - 19493562
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| ||| ||| ||||||||||||||||| |||||||||    
T  19493607 ttttcgccctttaagttttaaaatgttgcgattttgaccccctatt 19493562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 466
Target Start/End: Complemental strand, 23461246 - 23461149
Alignment:
Q  370 cccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||| ||||||| | ||||||| | |||||| | |||||| |||| ||||||| || |||||| |  ||||| || ||||||||||||||||||||||    
T  23461246 cccccatgtttaaggaaatatgttattttgaccctctaacttaagagaaatattctcttttgatcctttatcatttcaaaaagttgcgattatgaccc 23461149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 24448038 - 24448103
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||| ||||||||||| | |||||||||| | || ||| |||||||||||||||||  ||||||||    
T  24448038 atttataggctaaactgcacttttcgccccccaagttttaaaatgttgcgattttgatcccctatt 24448103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 462
Target Start/End: Complemental strand, 6798082 - 6798014
Alignment:
Q  395 ttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||| | |||||||||||| ||||||| | |||||||| ||||||||   |||||||||||||||||    
T  6798082 ttttgaccctctaacataaggaaaatatgatcttttgaccccttatcttctaaaaaagttgcgattatg 6798014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 10023784 - 10023844
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||| |||||| | |||||||||| ||| |||| |||||||||||| |||| |||||||||    
T  10023784 taggttaaactgcacttttcgccccctatattttaaaatgttgcgagtttgaccccctatt 10023844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 15681682 - 15681730
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg 423  Q
    ||||||||| |||||||||||||||| |  |||||||||||||| ||||    
T  15681682 atgtttagggaaatatgctcttttgaccccctaacataagggaactatg 15681730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 15681934 - 15681878
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccccta 346  Q
    ||||||||| | ||||| | || |||| |||||||||||||||||||||||| ||||    
T  15681934 ggctaaactgcacttttagacccctaagtttcaaaatgttgcgattttggcctccta 15681878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 346
Target Start/End: Complemental strand, 42438078 - 42438034
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggcccccta 346  Q
    ||||| |||||||| ||||||| | ||||||||||||||||||||    
T  42438078 cttttggccctctatatttcaagaagttgcgattttggcccccta 42438034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 3e-61; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 287 - 462
Target Start/End: Complemental strand, 26628332 - 26628157
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| ||    
T  26628332 ttaggctaaacttcatttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaa 26628233  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26628232 atatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 26628157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 288 - 462
Target Start/End: Complemental strand, 27853057 - 27852883
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||        | ||||||||||||||||||||||||| |||    
T  27853057 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaa 27852958  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27852957 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 27852883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 289 - 462
Target Start/End: Complemental strand, 48907596 - 48907424
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| ||||    
T  48907596 aggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaa-tggcaaaagtgaccccctatgtttagggaaat 48907498  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||| || ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  48907497 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttaaaaaaagttgcgattatg 48907424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 288 - 462
Target Start/End: Original strand, 25179576 - 25179750
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||||| |||    
T  25179576 taggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttggccccctattaaaaaaaatagcaaaagtgaccccctatgtttagggaaa 25179675  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| || ||||| |||| |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  25179676 tatgctcttttgacctcctaacgtaagagaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 25179750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 285 - 462
Target Start/End: Complemental strand, 3329122 - 3328945
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagga 384  Q
    |||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||        | | ||||||||||||||| |||||||     
T  3329122 tttttggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggaaaaagtgaccccctaagtttaggg 3329023  T
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  3329022 aaatatgctcttttgacctcctaacataagggaaatatgccttttgaccccttatctttacaaaaagttgcgattatg 3328945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 290 - 462
Target Start/End: Original strand, 13080894 - 13081066
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||        | |||||||||||||||||| |||||| |||||    
T  13080894 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagtgaccccctatatttagggaaata 13080993  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13080994 tgctcttttgacctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 13081066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 286 - 461
Target Start/End: Original strand, 4521950 - 4522125
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaa 385  Q
    |||||| |||||||| ||||||||||| ||| ||| |||||||||||||||||||||||||||        |||||||||||||||| |||||||||| |    
T  4521950 tttaggttaaacttcacttttcgccctataagttttaaaatgttgcgattttggccccctattaaaaaaagtagcaaaagtgaccccatatgtttaggga 4522049  T
Q  386 aatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattat 461  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4522050 aatatgctcttttgacctcttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattat 4522125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 289 - 462
Target Start/End: Original strand, 8542609 - 8542782
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| ||||||| ||||||| |||||||||||||| |||||| |||||||||        | ||||||||||||||||||||||||| ||||    
T  8542609 aggctaaacttcacttttcgtcctctaagtttcaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 8542708  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  8542709 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatg 8542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 290 - 462
Target Start/End: Complemental strand, 8339244 - 8339072
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||        | |||||||||||||| |||||||||| |||||    
T  8339244 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccttatgtttagggaaata 8339145  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||| |||||| || |||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  8339144 tgcttttttgacctcctaacataatagaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 8339072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 293 - 466
Target Start/End: Complemental strand, 23428920 - 23428747
Alignment:
Q  293 taaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgc 392  Q
    ||||||||  ||||||||| |||| |||||||||||| | ||||||||||||||||        | ||||||||||||||||||||||||| ||||||||    
T  23428920 taaacttcatttttcgccccctaagtttcaaaatgttacaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgc 23428821  T
Q  393 tcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  23428820 tcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 23428747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 290 - 462
Target Start/End: Complemental strand, 22500898 - 22500727
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||| |||||| |||| ||||||| |||||||||| |||||| |||||||||        | |||||||||||||||||||||||||||||||    
T  22500898 ggctaaacttcacttttcaccctttaaattttaaaatgttgcaattttgaccccctattaaaaaaa-tggcaaaagtgaccccctatgtttaggaaaata 22500800  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||| || ||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  22500799 tgctcttttgacctcctaacataagggaaatatgctttttgatcccttatatttacaaaaagttgcgattatg 22500727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 286 - 462
Target Start/End: Complemental strand, 22448052 - 22447872
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaa 385  Q
    |||||| |||||| | ||||||||||||||| ||| |||||||||| ||||||||||||||||        | |||||||||||| |||||||||||| |    
T  22448052 tttaggttaaactgcacttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaatatggcaaaagtgacctcctatgtttaggga 22447953  T
Q  386 aatatgctcttttgagcttctaacataagggaaatatgctttttgacctct----tatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||| ||    ||||||||||||||||||||||||||    
T  22447952 aatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatatatctttacaaaaagttgcgattatg 22447872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 287 - 462
Target Start/End: Complemental strand, 30155450 - 30155277
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    |||||||||||||   |||||||||||||| ||| |||||||||||||||||  ||||||||        | |||||||||| |||||||||||||| ||    
T  30155450 ttaggctaaactttatttttcgccctctaagttttaaaatgttgcgattttgatcccctattaaaaaa--tggcaaaagtgatcccctatgtttagggaa 30155353  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  30155352 atatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 30155277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 289 - 466
Target Start/End: Original strand, 10743408 - 10743583
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||| | |||||||||| |||| ||| |||||||||||||||||||||||||||         | |||||||||| ||||||||||||| ||||    
T  10743408 aggctaaactcctcttttcgccccctaagttttaaaatgttgcgattttggccccctattaaaaaaatga-caaaagtgactccctatgtttagggaaat 10743506  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||||| | |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  10743507 atgctcttttaaccc-ctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 10743583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 318 - 466
Target Start/End: Complemental strand, 28174005 - 28173857
Alignment:
Q  318 tttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataaggga 417  Q
    |||||||||||||||||||||||||||||||        | |||||| ||| || ||||||||||| |||||||||||||||| |  |||||||||||||    
T  28174005 tttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaaatgatcctctatgtttagggaaatatgctcttttgaccccctaacataaggga 28173906  T
Q  418 aatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  28173905 aatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 28173857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 369 - 462
Target Start/End: Complemental strand, 28155107 - 28155014
Alignment:
Q  369 ccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||| |||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28155107 ccccatatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 28155014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 302 - 466
Target Start/End: Complemental strand, 25022952 - 25022791
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgag 401  Q
    |||||||||| |||| |||||||||||| ||||||||||||  ||||        | ||||||||||||||||||||||||| ||||||||||||||||     
T  25022952 cttttcgcccactaagtttcaaaatgttacgattttggccctttattaaaaa---tggcaaaagtgaccccctatgtttagggaaatatgctcttttgac 25022856  T
Q  402 cttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |   |||||||||||| ||||| ||||||| | ||||||||||||||||||||||||||||||||    
T  25022855 cccataacataagggatatatgttttttgaacccttatctttacaaaaagttgcgattatgaccc 25022791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 361 - 463
Target Start/End: Original strand, 48860773 - 48860875
Alignment:
Q  361 aaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgatta 460  Q
    |||| ||||||| |||||||||| ||||||||| |||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  48860773 aaaaatgaccccttatgtttagggaaatatgctattttgaccttctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgatta 48860872  T
Q  461 tga 463  Q
    |||    
T  48860873 tga 48860875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 359 - 466
Target Start/End: Original strand, 3780950 - 3781054
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||||  ||||||||| |||||||||||||||| |  |||||||||||||||||||||||||||||  ||||||||||||||||||||||     
T  3780950 gcaaaagtgacccc--atgtttagggaaatatgctcttttgaccc-ctaacataagggaaatatgctttttgaccctttatctttacaaaaagttgcgaa 3781046  T
Q  459 tatgaccc 466  Q
    ||||||||    
T  3781047 tatgaccc 3781054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 359 - 466
Target Start/End: Complemental strand, 46673282 - 46673175
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttac-aaaaagttgcga 457  Q
    |||||||||| |||||||||||||| ||||||||||||||||    ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  46673282 gcaaaagtgatcccctatgtttagggaaatatgctcttttgactccctaacataagggaaatatg-tttttgaccccttatctttacaaaaaagttgcga 46673184  T
Q  458 ttatgaccc 466  Q
    |||||||||    
T  46673183 ttatgaccc 46673175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 359 - 466
Target Start/End: Original strand, 22416401 - 22416510
Alignment:
Q  359 gcaaaagtgacccccta-tgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcg 456  Q
    ||||||||||||||| | |||||||| | |||||||||||||| |||||||||||||| ||||||||| ||||||||  ||||||||||||||||||||     
T  22416401 gcaaaagtgaccccccaatgtttagggatatatgctcttttgaccttctaacataaggtaaatatgctcttttgacccattatctttacaaaaagttgca 22416500  T
Q  457 attatgaccc 466  Q
    ||||||||||    
T  22416501 attatgaccc 22416510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 302 - 466
Target Start/End: Complemental strand, 33279876 - 33279713
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgag 401  Q
    |||||||||| |||| ||| ||||||||||||||||| |||||||||        | ||||||||| ||| || |||||||||||||||||||||||||     
T  33279876 cttttcgccccctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtggccctct-tgtttaggaaaatatgctcttttgac 33279778  T
Q  402 cttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |  ||||||||||||||||||||| |||||| | ||||| ||||| ||||||| ||||||||||||    
T  33279777 cccctaacataagggaaatatgctcttttgatcccttatatttac-aaaagttacgattatgaccc 33279713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 359 - 462
Target Start/End: Complemental strand, 26127139 - 26127038
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||||  ||||||||| ||||||| | |||||| | ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||    
T  26127139 gcaaaagtgacccc--atgtttagggaaatatgttattttgaccctctaacataggggaaatatgctttttggccccttatctttacaaaaagttgcgat 26127042  T
Q  459 tatg 462  Q
    ||||    
T  26127041 tatg 26127038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 286 - 462
Target Start/End: Complemental strand, 26633663 - 26633491
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaa 385  Q
    ||||||||||||  | |||||| ||| |||| |||| |||||||||||||||| |||||||||        | |||||| |||||||  || |||||| |    
T  26633663 tttaggctaaacggcacttttcaccccctaagtttctaaatgttgcgattttgaccccctattaaaaaaa-tggcaaaaatgacccc--atctttaggga 26633567  T
Q  386 aatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||||| |  |||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  26633566 aatatgctcttttgaccc-ctaacataagagaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 26633491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 359 - 466
Target Start/End: Complemental strand, 9496450 - 9496344
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttaca-aaaagttgcga 457  Q
    |||||||||||| |  ||||||||| |||||||||||||||| | |||||||||| |||||||||||||||| || |||||||||||| |||||||||||    
T  9496450 gcaaaagtgaccac--atgtttagggaaatatgctcttttgaccctctaacataaaggaaatatgctttttgtccccttatctttacaaaaaagttgcga 9496353  T
Q  458 ttatgaccc 466  Q
      |||||||    
T  9496352 ggatgaccc 9496344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 369 - 462
Target Start/End: Complemental strand, 34878754 - 34878661
Alignment:
Q  369 ccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||| ||||||| |||||||||||||||| |  |||| |||||||||||||||||||||| | ||||||||||||||||||| | ||||||    
T  34878754 ccccctaagtttagggaaatatgctcttttgaccccctaatataagggaaatatgctttttgatcccttatctttacaaaaagtttcaattatg 34878661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 284 - 462
Target Start/End: Complemental strand, 40836488 - 40836310
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnn-tagcaaaagtgaccccctatgtttag 382  Q
    ||||||||||||||| |  ||||||||| |||| ||| ||||||||||||||||| |||||||||         | ||||||||||||||  ||||||||    
T  40836488 tttttaggctaaactgcatttttcgccccctaagttttaaaatgttgcgattttgaccccctattaaaaaaaaatggcaaaagtgacccc--atgtttag 40836391  T
Q  383 gaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatct-ttacaaaaagttgcgattatg 462  Q
    | ||||||| |||||||| |  |||| |||||||||||||| ||||||||| ||||| | | | |||||||||||||||||    
T  40836390 ggaaatatgttcttttgaccccctaatataagggaaatatgttttttgaccccttatatctcaaaaaaagttgcgattatg 40836310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 359 - 462
Target Start/End: Complemental strand, 26177189 - 26177088
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||||  ||||| ||| ||||||||| |||||| | ||||||||| ||||||||||||||||| |   |||||||||||||||||||||||    
T  26177189 gcaaaagtgacccc--atgttcagggaaatatgctattttgaccctctaacataggggaaatatgctttttggctcattatctttacaaaaagttgcgat 26177092  T
Q  459 tatg 462  Q
    ||||    
T  26177091 tatg 26177088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 359 - 423
Target Start/End: Original strand, 20001778 - 20001842
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg 423  Q
    ||||||||||||||||||||||||| |||||||||||||||| |  |||||||||||||||||||    
T  20001778 gcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatg 20001842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 393
Target Start/End: Complemental strand, 32960914 - 32960811
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaa 385  Q
    ||||||||||||||| |||||||||    || |||||||||||||||||||||| ||||||||        | ||||||||||||||||||||||||| |    
T  32960914 tttaggctaaacttcacttttcgcc----aagtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaaaagtgaccccctatgtttaggga 32960819  T
Q  386 aatatgct 393  Q
    ||||||||    
T  32960818 aatatgct 32960811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 413 - 466
Target Start/End: Original strand, 6927593 - 6927646
Alignment:
Q  413 agggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  6927593 agggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 6927646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 32960823 - 32960774
Alignment:
Q  413 agggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32960823 agggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 32960774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 471
Target Start/End: Original strand, 36311148 - 36311332
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnn-tagcaaaagtgaccccctatgtttagga 384  Q
    ||||||||||||| | ||||||| || |||| ||| |||||||||||||||||||||| ||||         | |||||||||||||| |||  ||||||    
T  36311148 tttaggctaaactgcacttttcgtcccctaagttttaaaatgttgcgattttggcccc-tattaaaaaaaaatggcaaaagtgaccccatat--ttagga 36311244  T
Q  385 aaatatgctcttttgagcttctaacataagggaaatatg-ctttttgacctcttatctttacaaaaagttgcgattatgacccatatt 471  Q
    |||||| ||||||||| |   |||||||||||||||||| | |||| ||| ||||||||  |||| ||||||||||| | ||||||||    
T  36311245 aaatatactcttttgaccccataacataagggaaatatgacattttaaccccttatcttctcaaatagttgcgattacggcccatatt 36311332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 461
Target Start/End: Original strand, 25336358 - 25336527
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||| | ||||||||||  |||||||||||||||||| ||||||||| | ||||         | ||||||||| ||  ||| |||||| || ||    
T  25336358 ggctaaactgcacttttcgccccttaaatttcaaaatgttgcaattttggcctcttattaaaaaaatga-caaaagtgaacc--tatatttagggaatta 25336454  T
Q  390 tgctcttttgagcttctaacataagggaaatatg-ctttttgacctcttatctttacaaaaagttgcgattat 461  Q
    ||||||||||| |  ||||||||||||||||||| | ||||||||| ||| |||  |||||||||||||||||    
T  25336455 tgctcttttgaccccctaacataagggaaatatgaccttttgaccttttaacttctcaaaaagttgcgattat 25336527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 462
Target Start/End: Original strand, 4775852 - 4776023
Alignment:
Q  292 ctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctat-tnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatat 390  Q
    ||||||| | |||||| |||||||| |||||||||||||| |||||||||||||||          | ||||||||||||||| ||||||||| ||||||    
T  4775852 ctaaactacacttttcaccctctaagtttcaaaatgttgcaattttggccccctataaaaaaaaattggcaaaagtgaccccc-atgtttagggaaatat 4775950  T
Q  391 gctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||| |||||| |  || ||||| |||||||||| |  ||||| | ||||||||   |||||||||||||||||    
T  4775951 gctattttgaccccctcacatacgggaaatatgatcctttgatcccttatcttcttaaaaagttgcgattatg 4776023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 34878524 - 34878587
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||| | ||| |||||| |||  |||||||||||||||||||||||||||||||    
T  34878524 ttttaggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggccccctatt 34878587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 413 - 466
Target Start/End: Original strand, 3821004 - 3821058
Alignment:
Q  413 agggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  3821004 agggaaatatgctcttttgaccctttatctttacaaaaagttgcgattatgaccc 3821058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 26628018 - 26628083
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||| ||||||||||| | |||||||||| |||  |||||||||||||| ||||||||||||||||    
T  26628018 atttctaggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggccccctatt 26628083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 22447738 - 22447798
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | |||||||||| |||  |||||||||||||| ||||||||||||||||    
T  22447738 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggccccctatt 22447798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 461
Target Start/End: Original strand, 33105013 - 33105112
Alignment:
Q  362 aaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgatta 460  Q
    |||||||||||| ||||||||| |||||||||||||||| | |||| |||||| |||||||| | |||||| | ||| ||||  ||||||||| ||||||    
T  33105013 aaagtgaccccccatgtttagggaaatatgctcttttgatc-tctatcataagagaaatatgttattttgatcccttttcttcccaaaaagtttcgatta 33105111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 20002012 - 20001954
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | |||||| ||| |||| |||||||||||||||||||||||||||||||    
T  20002012 aggctaaactgcacttttctccc-ctaagtttcaaaatgttgcgattttggccccctatt 20001954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 348
Target Start/End: Original strand, 28173720 - 28173787
Alignment:
Q  281 ttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| |||||||||| | | |||||||||| |||  ||||| |||||||||||||||||||||||||    
T  28173720 ttattattaggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggccccctatt 28173787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 348
Target Start/End: Original strand, 28154882 - 28154940
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | |||||||||| |||  |||||||||||||| ||||||||||||||||    
T  28154882 ggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggccccctatt 28154940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 1743556 - 1743495
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| | |||||||| | |||| ||| |||||||||||||||||| ||||||||    
T  1743556 ttaggctaaactgcacttttcgctccctaagttttaaaatgttgcgattttggtcccctatt 1743495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 13081201 - 13081140
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | | |||||||||  |||  |||||||||||||||||||||||||||||||    
T  13081201 ttaggctaaagtgcgcttttcgcctcctatgtttcaaaatgttgcgattttggccccctatt 13081140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 458
Target Start/End: Original strand, 1743334 - 1743417
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 458  Q
    |||||||||||||||| ||||||||| |  ||||||||| |||||| || | |||||||| ||||||||  ||||||||||||||    
T  1743334 atgtttaggaaaatatactcttttgaccccctaacataa-ggaaatgtgatcttttgaccccttatcttctcaaaaagttgcgat 1743417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 46387808 - 46387745
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg 423  Q
    ||||||||||||||| ||||||| | ||| |||||||||||| |  |||||||||||||||||||    
T  46387808 gcaaaagtgaccccc-atgtttaaggaaacatgctcttttgatcccctaacataagggaaatatg 46387745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 1743254 - 1743313
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | |||||||| | |||| |||||||||||| ||||||| ||||||||||    
T  1743254 aggctaaactgcacttttcgcaccctaagtttcaaaatgtttcgattttagccccctatt 1743313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 3328812 - 3328871
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | |||||||||| |||  |||||||||||| | ||||||||||||||||    
T  3328812 aggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggccccctatt 3328871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 26633360 - 26633418
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | |||||||||| |||| ||| ||||||||||||||||| |||||||||    
T  26633360 aggctaaactgcacttttcgccc-ctaagttttaaaatgttgcgattttgaccccctatt 26633418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 8338952 - 8338998
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| |||  ||||||||||||||||||||| |||||||||    
T  8338952 cttttcgccccctatgtttcaaaatgttgcgattttgaccccctatt 8338998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 32960640 - 32960698
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccc 343  Q
    |||||||||||||| |  ||||||||| |||  |||||||||||||| |||||||||||    
T  32960640 ttttaggctaaactgcatttttcgccccctatgtttcaaaatgttgcaattttggcccc 32960698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 4776109 - 4776064
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||||  || |||||||||||||||||||||| ||||    
T  4776109 ttttcgccctctaagatttaaaatgttgcgattttggccccttatt 4776064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 458
Target Start/End: Complemental strand, 35201229 - 35201131
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 457  Q
    |||||| |||||||  |||||| || ||| |||||||||||| |  ||||||||| ||||||||| | |||||||| ||||||||  ||||||||| |||    
T  35201229 gcaaaaatgaccccacatgttttgggaaacatgctcttttgacc--ctaacataaaggaaatatgatattttgaccccttatcttctcaaaaagttacga 35201132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 22500594 - 22500654
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | ||||||| || |||  ||||||||| |||| ||||||||||||||||    
T  22500594 taggctaaactgcacttttcggcccctatgtttcaaaatattgcaattttggccccctatt 22500654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 25179881 - 25179821
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | | |||||||||| |||  ||||||||||||||||| |||||||| ||||    
T  25179881 taggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgatattggccccttatt 25179821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 1e-60; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 288 - 462
Target Start/End: Original strand, 24961951 - 24962125
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||        | ||||||||||||||||||||||||| |||    
T  24961951 taggctaaacttcacttttcgccctctaagtttcaaaatgttgtgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaa 24962050  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24962051 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 24962125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 287 - 462
Target Start/End: Complemental strand, 4059829 - 4059654
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||        | ||||||||||||| ||||||||||| ||    
T  4059829 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttagccccctattaaaaaaaatggcaaaagtgaccctctatgtttagggaa 4059730  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||||| || ||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  4059729 atatgctcttttgacctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 4059654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 289 - 462
Target Start/End: Original strand, 3616798 - 3616971
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||        | |||||||||||| |||||||||||| ||||    
T  3616798 aggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaat 3616897  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||| ||  | |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  3616898 atgctcttttgacctcttcacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 3616971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 281 - 462
Target Start/End: Original strand, 29676070 - 29676251
Alignment:
Q  281 ttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgttt 380  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||| |||||| ||||        |||||||||||| |||||||||||    
T  29676070 ttatttataggctaaacttcacttttcgccctctaagtttcaaaatgttgcaatttaggccccatattaaaaagaatagcaaaagtgatcccctatgttt 29676169  T
Q  381 aggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||| |||||||||||| ||| || |||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||    
T  29676170 agggaaatatgctcttgtgatctcctaacataagtgaaatatgctttttgaccccttatctttataaaaagttgcgattatg 29676251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 302 - 466
Target Start/End: Complemental strand, 46432508 - 46432344
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgag 401  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| ||||||||||||||||     
T  46432508 cttttcgccccttaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttgac 46432409  T
Q  402 cttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  46432408 cccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 46432344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 288 - 462
Target Start/End: Original strand, 24196259 - 24196433
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||| | |||||||||| |||| ||||||||||||||||||||||||| |||||        | |||||||||||||| |||||||||  |||    
T  24196259 taggctaaactccacttttcgccccctaagtttcaaaatgttgcgattttggccctctattaaaaaaaatggcaaaagtgaccccatatgtttagagaaa 24196358  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  24196359 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgaatatg 24196433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 302 - 468
Target Start/End: Original strand, 24749809 - 24749976
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnn-tagcaaaagtgaccccctatgtttaggaaaatatgctcttttga 400  Q
    ||||||| ||||||| ||||||||||||||||||||||||| |||||         | ||||||||||||||||||||||||| ||||||||||||||||    
T  24749809 cttttcgtcctctaagtttcaaaatgttgcgattttggcccactattaaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctcttttga 24749908  T
Q  401 gcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccat 468  Q
     ||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  24749909 cctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccat 24749976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 287 - 462
Target Start/End: Complemental strand, 28920958 - 28920789
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| ||    
T  28920958 ttaggctaaacttcacttttcgccccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaa 28920859  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||||| || |||||||      |||||||||||||||| |||||||||||||||||| |||||||||    
T  28920858 atatgctcttttgacctcctaacat------aatatgctttttgaccccttatctttacaaaaagtggcgattatg 28920789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 290 - 466
Target Start/End: Complemental strand, 43706957 - 43706782
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||| | ||||| |||| |||| ||| |||||||||||||||||||||||||||        | ||||||||||||||||||||||||| |||||    
T  43706957 ggctaaactccactttttgccccctaatttttaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 43706858  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||||| |   |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  43706857 tgctcttttgaccca-taacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 43706782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 289 - 466
Target Start/End: Complemental strand, 19078228 - 19078053
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    ||||||| || | ||||| ||||||||  |||||||||||||| ||||||||||||||||        | |||||||||||||| |||||||||| ||||    
T  19078228 aggctaagctgcactttttgccctctatgtttcaaaatgttgcaattttggccccctattaaaaaaa-tggcaaaagtgacccc-tatgtttagggaaat 19078131  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  19078130 atgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 19078053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 289 - 466
Target Start/End: Complemental strand, 19126118 - 19125943
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    ||||||| || | ||||| ||||||||  |||||||||||||| ||||||||||||||||        | |||||||||||||| |||||||||| ||||    
T  19126118 aggctaagctgcactttttgccctctatgtttcaaaatgttgcaattttggccccctattaaaaaaa-tggcaaaagtgacccc-tatgtttagggaaat 19126021  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  19126020 atgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 19125943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 290 - 462
Target Start/End: Complemental strand, 48472165 - 48471995
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    |||||||| || ||||||||||||||| ||||||||| |||| ||||| ||||  ||||        | |||||| |||||||||||||||||| |||||    
T  48472165 ggctaaacatcacttttcgccctctaagtttcaaaatattgcaattttagccc--tattaaaaaaaatggcaaaattgaccccctatgtttagggaaata 48472068  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||| || |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  48472067 tgctcttttgacctcctaacataagagaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 48471995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 287 - 466
Target Start/End: Complemental strand, 51719427 - 51719250
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    |||||||||||| | ||||| | |  |||| ||||||||||||||||||||||| |||||||        | |||||||||||||| |||||||||| ||    
T  51719427 ttaggctaaactccactttttgtcacctaagtttcaaaatgttgcgattttggctccctattaaaaaaa-tggcaaaagtgaccccttatgtttagggaa 51719329  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||||||||| |  ||||||||||| ||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  51719328 atatgctcttttgatcccctaacataaggaaaatatg-ttttttaccccttatctttacaaaaagttgcgattatgaccc 51719250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 290 - 473
Target Start/End: Original strand, 2425225 - 2425407
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||| | ||||| |||  |||| ||||||||||||||||||||| |||||||||        | |||||||||||||| |||||||||| || ||    
T  2425225 ggctaaactccactttttgccacctaagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgacccc-tatgtttagggaa-ta 2425322  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttg-acctcttatctttacaaaaagttgcgattatgacccatattct 473  Q
    ||||||||||| | |||||||||||||||||||| |||||  | | |||||||||||||||||||||||||||||||||| ||||    
T  2425323 tgctcttttgaccctctaacataagggaaatatgttttttttaacccttatctttacaaaaagttgcgattatgacccattttct 2425407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 466
Target Start/End: Complemental strand, 2657818 - 2657640
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    |||||||||||| | |||||||||| |||| ||||||||| ||||||||||| |||| ||||        | ||||||||||| ||||||||||||| ||    
T  2657818 ttaggctaaactacacttttcgccccctaagtttcaaaatattgcgattttgacccc-tattaaaaaaaatggcaaaagtgactccctatgtttagggaa 2657720  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||| |||| |  ||||||||| ||||||||||| |||||||| |||||||||  ||||||||| |||||||||||    
T  2657719 atatgctctattgaccgcctaacataa-ggaaatatgctcttttgaccccttatcttttaaaaaagttgtgattatgaccc 2657640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 360 - 462
Target Start/End: Complemental strand, 4455277 - 4455174
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg-ctttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||| |||| |||||||||||||||||||||||||| |   ||||||||||||||||||  ||||||||| ||||||||  ||||||||||||||    
T  4455277 caaaagtgatccccaatgtttaggaaaatatgctcttttgaccccgtaacataagggaaatatgattttttgaccacttatcttctcaaaaagttgcgat 4455178  T
Q  459 tatg 462  Q
    ||||    
T  4455177 tatg 4455174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 359 - 461
Target Start/End: Original strand, 28750346 - 28750448
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataa-gggaaatatgctttttgacctcttatctttacaaaaagttgcga 457  Q
    ||||||||||||||  |||||||| ||||||||||||||||| | |||||||||| |||||| ||| |||||| |||||||||||||  |||||||||||    
T  28750346 gcaaaagtgacccctcatgtttagaaaaatatgctcttttgaccctctaacataaggggaaaaatgttttttggcctcttatcttta-taaaagttgcga 28750444  T
Q  458 ttat 461  Q
    ||||    
T  28750445 ttat 28750448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 360 - 468
Target Start/End: Complemental strand, 29182234 - 29182126
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||| |||||||||  |||||||||||||||| |  ||||||||||||||||||| | |||||||| ||||||||  || |||||||||||    
T  29182234 caaaagtgaccccttatgtttagagaaatatgctcttttga-cccctaacataagggaaatatgatcttttgaccccttatcttctcataaagttgcgat 29182136  T
Q  459 tatgacccat 468  Q
    |||| |||||    
T  29182135 tatggcccat 29182126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 359 - 462
Target Start/End: Complemental strand, 16551879 - 16551775
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 457  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |  ||||||| ||  ||||||| | |||||||| ||||||||  |||||||||||||    
T  16551879 gcaaaagtgacccccaatgtttagggaaatatgctcttttgaccccctaacatcagacaaatatgatcttttgaccccttatcttctcaaaaagttgcga 16551780  T
Q  458 ttatg 462  Q
    |||||    
T  16551779 ttatg 16551775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 21148048 - 21148111
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg 423  Q
    |||||||||||||||||||||||| |||||||||||||||| |  |||||||||||||||||||    
T  21148048 caaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatg 21148111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 376 - 462
Target Start/End: Complemental strand, 27093070 - 27092984
Alignment:
Q  376 tgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||| |||||||||||||||| |  |||| ||| | |||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  27093070 tgtttagggaaatatgctcttttgaccccctaatatatgtgaaatatgttttttgaccccttatctttacaaaaagttgcaattatg 27092984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 465
Target Start/End: Original strand, 47685186 - 47685276
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacc 465  Q
    ||||||| | ||||||||| |||||| |  ||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||| ||||||    
T  47685186 atgtttaaggaaatatgctattttgatcccctaacataaggaaaatatgttttttgaccccttacctttacaaaaagttgcgataatgacc 47685276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 405 - 466
Target Start/End: Complemental strand, 31084801 - 31084740
Alignment:
Q  405 ctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||| || ||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  31084801 ctaacatatggaaaatatgctttttgaccccttatctttacaaaaagtttcgattatgaccc 31084740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 454
Target Start/End: Original strand, 22786099 - 22786194
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttg 454  Q
    |||||||||| |||| ||||||||| |||||||||||||||| | ||||||||||| |||||||| | |||||||| ||||||||  ||||||||||    
T  22786099 gcaaaagtgagcccccatgtttagggaaatatgctcttttga-catctaacataagtgaaatatgatcttttgaccccttatcttctcaaaaagttg 22786194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 287 - 466
Target Start/End: Complemental strand, 18606990 - 18606811
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    |||||||||||| | ||||||| || |||| ||| ||||||||| ||||||| |||||||||        | | ||||||||||||  ||||||||| ||    
T  18606990 ttaggctaaactacacttttcgacccctaagttttaaaatgttgtgattttgaccccctattaaaaaac-tggaaaaagtgacccctcatgtttagggaa 18606892  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||||||||| |   |||||||||| ||||| | | |||||||| ||||||||  |||||||||| |||||| ||||    
T  18606891 atatgctcttttgaccccataacataaggaaaatacgatcttttgaccccttatcttctcaaaaagttgtgattatcaccc 18606811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 16551656 - 16551702
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  16551656 cttttcgccctctaagtttcaaaatgttgcaattttggccccctatt 16551702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 51719119 - 51719181
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||| | ||||||||||||||  ||||| |||||||| ||||||||||||||||    
T  51719119 tttaggctaaactgcacttttcgccctctatgtttcataatgttgcaattttggccccctatt 51719181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 16972157 - 16972096
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| | |||||||||| |||| ||| |||||||||||||||| ||||||||||    
T  16972157 ttaggctaaactgcacttttcgccccctaagttttaaaatgttgcgattttagccccctatt 16972096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 2657507 - 2657571
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| |||| |||||| ||||||||||| ||| ||| |||||||||||||||| ||||||||||    
T  2657507 ttttttggcttaacttcacttttcgccctttaagttttaaaatgttgcgattttagccccctatt 2657571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 3617108 - 3617044
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| ||||||||||| |||||||||| |||  |||||||||||||| ||||| ||||||||||    
T  3617108 ttttttggctaaacttcacttttcgccccctatgtttcaaaatgttgcaattttcgccccctatt 3617044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 285 - 348
Target Start/End: Complemental strand, 2425532 - 2425469
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||| | ||||| |||| |||  ||||| |||||||||||||||||||||||||    
T  2425532 ttttaggctaaactgcactttttgccccctatgtttcataatgttgcgattttggccccctatt 2425469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 4059521 - 4059580
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||| | | |||||||||| |||  |||||||||||||||||||||||||||||||    
T  4059521 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggccccctatt 4059580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 293 - 348
Target Start/End: Complemental strand, 21148248 - 21148193
Alignment:
Q  293 taaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||| | ||||||| || |||||||| |||||||||||||||||||||||||||    
T  21148248 taaactgcacttttcgacccctaaattttaaaatgttgcgattttggccccctatt 21148193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 28552317 - 28552363
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| |||| |||||||||||||||||||||| ||||||||    
T  28552317 cttttcgccccctaagtttcaaaatgttgcgattttggtcccctatt 28552363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 51685871 - 51685809
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctat 347  Q
    |||||||||||| | | |||||| |||||||| |||||||| |||||||||||||||| ||||    
T  51685871 ttttaggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctat 51685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 27092841 - 27092906
Alignment:
Q  278 tagttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccc 343  Q
    ||||| ||||||||||||||| | ||| |||||| |||  |||||||||||| |||||||||||||    
T  27092841 tagttttttttaggctaaactgcacttctcgccccctatgtttcaaaatgttacgattttggcccc 27092906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 348
Target Start/End: Original strand, 43706655 - 43706712
Alignment:
Q  291 gctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||| | |||||||||| |||  ||||| |||||||||||||||||||||||||    
T  43706655 gctaaactgcacttttcgccccctatgtttcataatgttgcgattttggccccctatt 43706712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 348
Target Start/End: Original strand, 50334719 - 50334776
Alignment:
Q  291 gctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||| | |||||||||| |||| ||| |||||||||| ||||||||||||||||    
T  50334719 gctaaactccacttttcgccccctaagttttaaaatgttgcaattttggccccctatt 50334776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 466
Target Start/End: Complemental strand, 2260611 - 2260506
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 458  Q
    |||||||||||||  ||||||||  ||||||||| |||||| |   ||| |||||||||||||| | |||| ||| ||||||||  ||||||||||||||    
T  2260611 caaaagtgacccc--atgtttagtgaaatatgcttttttgaccccataatataagggaaatatgatattttaaccccttatcttctcaaaaagttgcgat 2260514  T
Q  459 tatgaccc 466  Q
    | ||||||    
T  2260513 tctgaccc 2260506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 463
Target Start/End: Complemental strand, 26605494 - 26605408
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatga 463  Q
    ||||||||| ||||||||| |||||| |  ||||||||||  ||||||| |||||||  |||||| ||||||||||||| |||||||||    
T  26605494 atgtttagggaaatatgctattttgaccc-ctaacataaga-aaatatgttttttgatatcttatttttacaaaaagttacgattatga 26605408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 46432214 - 46432274
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | | |||||||||| |||  ||||| |||||||||||||||||||||||||    
T  46432214 taggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggccccctatt 46432274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 464
Target Start/End: Original strand, 9387762 - 9387868
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttga-gcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcg 456  Q
    |||||||| |||||| ||||||| | ||||||||||||||||  |  ||||||||||||||||||  | ||||||||  |||||||  |||||| |||||    
T  9387762 gcaaaagtaaccccc-atgtttaaggaaatatgctcttttgacccccctaacataagggaaatataatcttttgaccctttatcttctcaaaaatttgcg 9387860  T
Q  457 attatgac 464  Q
    ||||||||    
T  9387861 attatgac 9387868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 466
Target Start/End: Original strand, 21185278 - 21185380
Alignment:
Q  361 aaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgatt 459  Q
    ||||||||||||  ||||||||| ||||||| |||||||| | | |||||||||  ||||||| | |||||||| | ||||||  |||||||||||||||    
T  21185278 aaaagtgacccc--atgtttagggaaatatgttcttttgaccct-taacataaga-aaatatgatcttttgaccccctatcttctcaaaaagttgcgatt 21185373  T
Q  460 atgaccc 466  Q
    |||||||    
T  21185374 atgaccc 21185380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 24196566 - 24196507
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | |||||||||  |||  ||| |||||||||||||||||||||||||||    
T  24196566 aggctaaactgcacttttcgcctcctatgttttaaaatgttgcgattttggccccctatt 24196507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 348
Target Start/End: Original strand, 48471891 - 48471921
Alignment:
Q  318 tttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||||||||||||||||||||    
T  48471891 tttcaaaatgttgcgattttggccccctatt 48471921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 471
Target Start/End: Original strand, 16971935 - 16972032
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg-ctttttgacctcttatctttacaaaaagttgcgattatgacccatatt 471  Q
    ||||||||| | ||||||||||| || |  ||||||||||||||||||| | |||||||   |||||||  |||||  ||||||||||||||| ||||    
T  16971935 atgtttagggatatatgctctttagaccccctaacataagggaaatatgaccttttgactctttatcttctcaaaatattgcgattatgacccctatt 16972032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 461
Target Start/End: Original strand, 10684862 - 10684965
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttc-taacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcg 456  Q
    |||||||||||||| | |||||||| |||||| |||| |||| |  | |||||||||  ||||||| | |||||||| ||||||||  ||||||||||||    
T  10684862 gcaaaagtgaccccat-tgtttagggaaatatactctattgacccccctaacataagaaaaatatgatcttttgaccccttatcttctcaaaaagttgcg 10684960  T
Q  457 attat 461  Q
    |||||    
T  10684961 attat 10684965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 348
Target Start/End: Complemental strand, 16878987 - 16878931
Alignment:
Q  292 ctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||| | |||||||||  |||| ||||||||||||| |||||||| ||||||||    
T  16878987 ctaaactgcacttttcgccacctaagtttcaaaatgttgagattttggtcccctatt 16878931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 24962263 - 24962199
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| |||||||||   |||||||||| |||  ||||||||||||||  |||||||||||||||    
T  24962263 ttttttggctaaactgtacttttcgccccctatgtttcaaaatgttgcagttttggccccctatt 24962199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 5e-60; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 289 - 462
Target Start/End: Original strand, 11175906 - 11176079
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| ||||    
T  11175906 aggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 11176005  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  11176006 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgtgattatg 11176079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 288 - 462
Target Start/End: Complemental strand, 9051333 - 9051159
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||||||||||| |||||||||        | ||||||||||| ||||||||||||| |||    
T  9051333 taggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgactccctatgtttagggaaa 9051234  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9051233 tatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 9051159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 293 - 462
Target Start/End: Original strand, 2986689 - 2986858
Alignment:
Q  293 taaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgc 392  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||        |  |||||||||||||||||||||||| ||||||||    
T  2986689 taaacttcacttttcgccctttaagtttcaaaatgttgcgattttggccccctattaaaaaaaatgacaaaagtgaccccctatgtttagggaaatatgc 2986788  T
Q  393 tcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2986789 tcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 2986858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 287 - 462
Target Start/End: Complemental strand, 18538135 - 18537960
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| ||    
T  18538135 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaa 18538036  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||| |||||| ||  |||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  18538035 atatgcttttttgacctcataacattagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatg 18537960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 288 - 462
Target Start/End: Complemental strand, 30714580 - 30714406
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||        | |||||||||||||||||||||| || |||    
T  30714580 taggctaaacttcacttttcgccctctaaattttaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttcgggaaa 30714481  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| || |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  30714480 tatgctcttttgacctcctaacataagggaaatatgctttttgacccgttatctttacaaaaagttgtgattatg 30714406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 289 - 460
Target Start/End: Complemental strand, 6764022 - 6763851
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    ||||||||||||  |||||||||||||| |||||||||||||||||||||| ||||||||        | ||||||||||||||||||||||||| ||||    
T  6764022 aggctaaacttcatttttcgccctctaagtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 6763923  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgatta 460  Q
    |||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||    
T  6763922 atgctcttttgacctcctaacataaggaaaatatgctttttgaccccttatctttacaaaaagtagcgatta 6763851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 288 - 462
Target Start/End: Original strand, 15735062 - 15735236
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||        | |||||||||||||||||||||| || |||    
T  15735062 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggtcccctattaaaagaaatggcaaaagtgaccccctatgttttgggaaa 15735161  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| ||  ||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||    
T  15735162 tatgctcttttgacctcgtaacataagggaaatatgtattttgaccccttatctttacaaaaagttgcgattatg 15735236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 284 - 462
Target Start/End: Original strand, 38716188 - 38716365
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagg 383  Q
    ||||||||||||||||| |||||| |||||||| ||| ||||||||||||||||| |||||||||        | |||||||||||||| ||||||||||    
T  38716188 tttttaggctaaacttcacttttcaccctctaagttttaaaatgttgcgattttgaccccctattaaaaaaa-tggcaaaagtgaccccatatgtttagg 38716286  T
Q  384 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
     |||||||||||||||| || |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  38716287 gaaatatgctcttttgacctcctaacataagagaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 38716365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 284 - 466
Target Start/End: Original strand, 4587854 - 4588037
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnn-tagcaaaagtgaccccctatgtttag 382  Q
    ||||||||||||||  | |||||||||| |||| |||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||    
T  4587854 tttttaggctaaacaccacttttcgccccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaaatggcaaaagtgaccccctatgtttag 4587953  T
Q  383 gaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    | |||||||||||||||| |  ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  4587954 ggaaatatgctcttttgaccccctaacataagggaaatatgttttttaaccccttatctttacaaaaagttgcgattatgaccc 4588037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 288 - 462
Target Start/End: Complemental strand, 25299106 - 25298933
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    |||||||||||||  |||||||||||||| |||||||||||||||||||| ||||||||||        | ||||||||||||||||||||||||| |||    
T  25299106 taggctaaacttcaattttcgccctctaagtttcaaaatgttgcgattttagccccctattaaaaaaa-tggcaaaagtgaccccctatgtttagggaaa 25299008  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| ||  |||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||||    
T  25299007 tatgctcttttgacctcttaacataaaggaaatatgttttttgatcccttatctttacaaaaagttgcgattatg 25298933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 283 - 466
Target Start/End: Original strand, 15700740 - 15700923
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttag 382  Q
    |||||||||||||| | | ||||||||||  ||| ||| |||||||||||||||||| ||||||||        | ||| |||||||||||||||||| |    
T  15700740 atttttaggctaaagtccacttttcgccccttaagttttaaaatgttgcgattttggacccctattaaaaaaaatggcacaagtgaccccctatgtttcg 15700839  T
Q  383 gaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    | |||||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  15700840 ggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 15700923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 286 - 466
Target Start/End: Original strand, 22191042 - 22191222
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaa 385  Q
    ||||||||||||| | ||||||| || |||  ||| |||||||||| |||||||||||||||         | ||||||||||||||||||||||||| |    
T  22191042 tttaggctaaactacacttttcgtcccctatgttttaaaatgttgcaattttggccccctatcaaaaaaaatggcaaaagtgaccccctatgtttaggga 22191141  T
Q  386 aatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||||||||||  | |||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||    
T  22191142 aatatgctcttttgacttcctaacataagggaaatatgccttttgaccccttatctttacaaaaagttacgattatgaccc 22191222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 359 - 462
Target Start/End: Original strand, 9787628 - 9787731
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||| ||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  9787628 gcaaaagtgacccactatgtttagggaaatatgctcttttgacctgctaacataagggaaatatgctttttgaccccttatctttacaaaaagttacgat 9787727  T
Q  459 tatg 462  Q
    ||||    
T  9787728 tatg 9787731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 17368314 - 17368388
Alignment:
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  17368314 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatg 17368388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 359 - 471
Target Start/End: Original strand, 331781 - 331894
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgc-tttttgacctcttatctttacaaaaagttgcga 457  Q
    ||||||||||||  | ||||||||| |||||||||||||||| | |||||| |||||||||||||| ||||||| |  |||||||| |||||||||||||    
T  331781 gcaaaagtgaccttccatgtttagggaaatatgctcttttgaccctctaacttaagggaaatatgcttttttgatccattatctttgcaaaaagttgcga 331880  T
Q  458 ttatgacccatatt 471  Q
    ||||||||| ||||    
T  331881 ttatgacccctatt 331894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 360 - 471
Target Start/End: Original strand, 2190605 - 2190714
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctt-tttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||   ||||||||| |||||||||||||||| | |||||| ||||| |||||||||  |||| || |||||||||||||||||||||| |    
T  2190605 caaaagtgaccc---atgtttagggaaatatgctcttttgaccctctaacttaaggaaaatatgctcgtttggccccttatctttacaaaaagttgcggt 2190701  T
Q  459 tatgacccatatt 471  Q
    |||||||||||||    
T  2190702 tatgacccatatt 2190714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 466
Target Start/End: Complemental strand, 4105040 - 4104952
Alignment:
Q  378 tttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||| ||||||  |||||||| || |||||||||||| |||||||| |||||||  ||||| ||||||||||||||||||||||||||    
T  4105040 tttagggaaatatattcttttgacct-ctaacataaggggaatatgctcttttgacaccttatatttacaaaaagttgcgattatgaccc 4104952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 21494555 - 21494626
Alignment:
Q  395 ttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||| | ||||||| ||| |||||||| ||||||  |||||||||||||||||||||||| |||||||||    
T  21494555 ttttgaccctctaacagaagagaaatatgttttttgttctcttatctttacaaaaagttgcgtttatgaccc 21494626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 462
Target Start/End: Complemental strand, 22387287 - 22387200
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||  |||||||||||||||| |  |||||||| | |||||||| ||||||||| ||||||| |||||| ||||| |||||||    
T  22387287 atgtttagtgaaatatgctcttttgaccccctaacatatgagaaatatgttttttgaccccttatctatacaaagagttgtgattatg 22387200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 466
Target Start/End: Original strand, 28365581 - 28365686
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||| ||| |||||| |||||||||| ||||| |  ||||||| ||||||||||| | |||| ||| ||||||||  ||||||||||||||    
T  28365581 caaaagtgacccc-tatatttagggaaatatgctcgtttgaccc-ctaacatgagggaaatatgatcttttaaccccttatcttctcaaaaagttgcgat 28365678  T
Q  459 tatgaccc 466  Q
    ||||||||    
T  28365679 tatgaccc 28365686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 33199547 - 33199630
Alignment:
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaa-gttgcgattatgaccc 466  Q
    |||||||||||||||| |||||||| | ||||||||||||| ||||| ||| |||||||||||||||  |||||||| ||||||    
T  33199547 aaatatgctcttttgaccttctaactttagggaaatatgctcttttggccttttatctttacaaaaatattgcgattttgaccc 33199630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 25884174 - 25884236
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||| | | |||||||| |||| ||| |||||||||||||||||||||||||||    
T  25884174 tttaggctaaactgcacatttcgccccctaagttttaaaatgttgcgattttggccccctatt 25884236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 458
Target Start/End: Original strand, 36464343 - 36464441
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 457  Q
    ||||||||||||||  ||||||||| ||||||| |||||||| |  ||||||||||||||||||  | |||||||  ||||||||  |||||||||||||    
T  36464343 gcaaaagtgacccc--atgtttagggaaatatgatcttttgaccccctaacataagggaaatataatcttttgactccttatcttctcaaaaagttgcga 36464440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 461
Target Start/End: Complemental strand, 25884412 - 25884310
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 457  Q
    ||||||||||||||| ||||||||  ||||||| | |||| | |  ||||||||||||||||||| | |||| ||| ||||||||  |||||||||||||    
T  25884412 gcaaaagtgaccccc-atgtttagagaaatatgttattttaatcccctaacataagggaaatatgatattttaaccccttatcttctcaaaaagttgcga 25884314  T
Q  458 ttat 461  Q
    ||||    
T  25884313 ttat 25884310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 30714270 - 30714333
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| | | |||||||||| |||  ||| |||||||||||||||||||||||||||    
T  30714270 ttttaggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttggccccctatt 30714333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 459
Target Start/End: Original strand, 1020485 - 1020559
Alignment:
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgatt 459  Q
    ||||||||| |||||| | ||||||||||| |||||||| |||||| ||  |||||||| |||||||||| ||||    
T  1020485 aaatatgctattttgaccctctaacataagagaaatatgatttttgtccctttatcttttcaaaaagttgtgatt 1020559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 2986992 - 2986932
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | | |||||| | |||||  |||||||||||||||||||||||||||||||    
T  2986992 taggctaaagtgcacttttcactctctatgtttcaaaatgttgcgattttggccccctatt 2986932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 348
Target Start/End: Complemental strand, 9787861 - 9787803
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | |||||||||| |||  ||||||||| |||| ||||||||||||||||    
T  9787861 ggctaaactacacttttcgccccctatgtttcaaaatattgcaattttggccccctatt 9787803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 15147814 - 15147854
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttga 400  Q
    ||||||||||||||| ||||||||| ||||||||||||||||    
T  15147814 gcaaaagtgaccccc-atgtttagggaaatatgctcttttga 15147854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 464
Target Start/End: Original strand, 2123469 - 2123549
Alignment:
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgac 464  Q
    |||||||||||||||| | |||| | | ||||||||| | | ||||||||  |||||||||||||||||||| ||| ||||    
T  2123469 aaatatgctcttttgatcctctatctttagggaaataagttcttttgaccctttatctttacaaaaagttgcaattttgac 2123549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 462
Target Start/End: Complemental strand, 26829308 - 26829221
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||| | ||||||||||||| || |  ||||||||||||||||||| | |||||||| |||||| |  |||||||||| |||||||    
T  26829308 atgtttaaggaaatatgctctttggaccc-ctaacataagggaaatatgatcttttgaccccttatcatctcaaaaagttgtgattatg 26829221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 468
Target Start/End: Complemental strand, 28319188 - 28319132
Alignment:
Q  413 agggaaatatgctttttgacctcttatctttacaaaa-agttgcgattatgacccat 468  Q
    |||||||||||||||||     ||||||||||||||| |||||||||||||||||||    
T  28319188 agggaaatatgcttttttggtccttatctttacaaaatagttgcgattatgacccat 28319132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 1e-57; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 289 - 462
Target Start/End: Original strand, 17648242 - 17648415
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||||||||| |||||||        | ||||||||||||||||||||||||| ||||    
T  17648242 aggctaaacttcacttttcgccctctaagtttcaaaatgttgtgattttggctccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 17648341  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17648342 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 17648415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 289 - 462
Target Start/End: Complemental strand, 4519172 - 4518999
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||||||||||| |||||||        | ||||||||||||||||||||||||| ||||    
T  4519172 aggctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 4519073  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  4519072 atgctcttttgatctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 4518999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 290 - 462
Target Start/End: Complemental strand, 30784568 - 30784396
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||        | |||||||||||||| |||||||||| |||||    
T  30784568 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccttattaaaaaaaatggcaaaagtgaccccgtatgtttagggaaata 30784469  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  30784468 tgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 30784396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 290 - 462
Target Start/End: Complemental strand, 8802703 - 8802532
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||        | ||||||||||||| ||||||||||| |||||    
T  8802703 ggctaaactttacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccctctatgtttagggaaata 8802604  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  8802603 tgctcttttgacctcctaacataagggaaata-gctttttgaccccttatctttacaaaaagttgcgattatg 8802532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 288 - 466
Target Start/End: Original strand, 38630053 - 38630231
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    |||| ||||||||  |||||||||||||| |||||||||||||||||||||  ||||||||        | | ||||||||| ||||||||||||| |||    
T  38630053 taggttaaacttcatttttcgccctctaagtttcaaaatgttgcgattttgatcccctattaaaaaaaatggtaaaagtgactccctatgtttagggaaa 38630152  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38630153 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 38630231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 285 - 462
Target Start/End: Complemental strand, 12723570 - 12723393
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagga 384  Q
    |||| ||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||        | |||||| |||||||||||||||||      
T  12723570 tttttggccaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaaatgaccccctatgtttagag 12723471  T
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  12723470 aaatatgctcttttgacctcctaacataagggaaatatgttttttgacccgttatctttacaaaaagttgcgattatg 12723393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 285 - 466
Target Start/End: Original strand, 19924260 - 19924441
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagga 384  Q
    |||| |||||||| || ||||||||||||||| ||| |||||||||| ||||||||||| ||||        | |||||||||||||||||||||||||     
T  19924260 tttttggctaaacctcacttttcgccctctaagttttaaaatgttgcaattttggccccttattaaaaaaaatggcaaaagtgaccccctatgtttaggg 19924359  T
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||| ||||| ||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19924360 aaatatactcttctgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 19924441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 289 - 466
Target Start/End: Original strand, 44146971 - 44147146
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||        | |||||||||||||| |||||||||| ||||    
T  44146971 aggctaaacttcacttttcgccctccaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgacccc-tatgtttagggaaat 44147069  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||| |||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  44147070 atgctattttgacctcctaacataagggaaatatgctttttgaccccttatctttac-aaaagttgcgattatgaccc 44147146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 293 - 462
Target Start/End: Complemental strand, 5192572 - 5192403
Alignment:
Q  293 taaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgc 392  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||||| || |||||        | |||||||||||| |||||||||||| ||||||||    
T  5192572 taaacttcacttttcgccctctaagttttaaaatgttgcgattttggtcctctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaatatgc 5192473  T
Q  393 tcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5192472 tcttttgacctcttaacataagggaaatatgttttttgacctcttatctttacaaaaagttgcgattatg 5192403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 287 - 462
Target Start/End: Complemental strand, 4807908 - 4807732
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgacccc-ctatgtttaggaa 385  Q
    |||||||||||||| ||||||||| | ||| |||||||||||||||||||  ||||||||||        |||||||||||||||| ||||||||| | |    
T  4807908 ttaggctaaacttcacttttcgccttttaagtttcaaaatgttgcgatttatgccccctattaaaaaaaatagcaaaagtgacccctctatgtttaagga 4807809  T
Q  386 aatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4807808 aatatgttcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 4807732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 288 - 457
Target Start/End: Complemental strand, 22452479 - 22452310
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||| | ||||| |||| |||||||||||||| |||||||||||| ||||||||          |||||||||||| | ||| |||||| |||    
T  22452479 taggctaaactccacttttagccccctaaatttcaaaatattgcgattttggtcccctattaaaaaaaacggcaaaagtgacctcatatatttagggaaa 22452380  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcga 457  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22452379 tatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcga 22452310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 359 - 462
Target Start/End: Complemental strand, 19391622 - 19391519
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  19391622 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgat 19391523  T
Q  459 tatg 462  Q
    ||||    
T  19391522 tatg 19391519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 290 - 462
Target Start/End: Original strand, 33895375 - 33895546
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||| ||||||||||||||| ||| |||||||||| |||||||  || ||||         ||||||||||| |||||||||||||| |||||    
T  33895375 ggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggttccatattaaaaaaaa-agcaaaagtgatcccctatgtttagggaaata 33895473  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||| || ||||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||||    
T  33895474 tgctcttttgacctcctaacataagggaaatatgttttttaaccccttatctttacaaaaagttgcaattatg 33895546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 283 - 466
Target Start/End: Complemental strand, 18881812 - 18881631
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttag 382  Q
    |||||||||||||||  | |||||||||| |||| ||| | |||||||| |||||| |||||||||        | |||||||||||||   ||||||||    
T  18881812 atttttaggctaaacaacacttttcgccccctaagttttataatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgaccc---atgtttag 18881716  T
Q  383 gaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    | ||||||||| ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| ||||||||||    
T  18881715 ggaaatatgctattttgagcttctaacataagggaaatacgctcttttgaccccttatctttacaaaaagttgcaattatgaccc 18881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 288 - 430
Target Start/End: Complemental strand, 21930107 - 21929967
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||        | |||||||||||||| |||||||||| |||    
T  21930107 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctattaaaaaaa-tggcaaaagtgacccc-tatgtttagggaaa 21930010  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttg 430  Q
    ||||||||||||| || ||||||||||||||||||||||||||    
T  21930009 tatgctcttttgacctcctaacataagggaaatatgctttttg 21929967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 21666549 - 21666406
Alignment:
Q  318 tttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataaggga 417  Q
    |||||||||||||||||||||||||||||||        | ||||||||||||||| ||||||||| ||||||||||| |||| |  |||||||||||||    
T  21666549 tttcaaaatgttgcgattttggccccctattaaaaaaa-tggcaaaagtgaccccccatgtttagggaaatatgctctcttgaccccctaacataaggga 21666451  T
Q  418 aatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||| ||||||||| |||||||||| | |||||||| ||||||    
T  21666450 aatatgttttttgaccccttatctttagataaagttgcaattatg 21666406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 359 - 466
Target Start/End: Complemental strand, 32400557 - 32400450
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||||||||||||||  |||||||| ||||||| |  |||||||||||||||||||| ||||||||  |||||||||||||||||||| ||    
T  32400557 gcaaaagtgaccccctatgtttagtgaaatatgcgcttttgaccccctaacataagggaaatatgccttttgaccatttatctttacaaaaagttgcaat 32400458  T
Q  459 tatgaccc 466  Q
    ||||||||    
T  32400457 tatgaccc 32400450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 284 - 455
Target Start/End: Original strand, 3380193 - 3380363
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagg 383  Q
    ||||| ||||||||| |  ||||| |||| ||| ||||||||||||||||||||||| |||||||         |  || |||||||||| |||||||||    
T  3380193 tttttcggctaaactgcatttttcaccctttaagtttcaaaatgttgcgattttggctccctattaaaaaaatgaa-aatagtgaccccccatgtttagg 3380291  T
Q  384 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgc 455  Q
     |||||||||||||||  | |||| ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  3380292 taaatatgctcttttgtccctctagcataagggaaatatgttttttgacctcttatctctacaaaaagttgc 3380363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 19392873 - 19392812
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  19392873 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 19392812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 360 - 468
Target Start/End: Original strand, 3208050 - 3208158
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||| || ||||||||||| ||||||| |||||||| |  ||||||||||||||||||| | |||||||| ||||||||   |||||||||||||    
T  3208050 caaaagtgaacctctatgtttagggaaatatgttcttttgaccc-ctaacataagggaaatatgatattttgaccccttatcttcttaaaaagttgcgat 3208148  T
Q  459 tatgacccat 468  Q
    ||||||||||    
T  3208149 tatgacccat 3208158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 466
Target Start/End: Complemental strand, 4423262 - 4423157
Alignment:
Q  363 aagtgaccccctatgtttaggaaaatatgctcttttgagcttc-taacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgatta 460  Q
    ||||||||||| ||||||| | ||||||| |||||| | || | |||||||||||||||||| | |||||||| ||||||||| |||||| |||||||||    
T  4423262 aagtgaccccccatgtttatggaaatatgttcttttaacctccataacataagggaaatatgatcttttgaccccttatcttttcaaaaaattgcgatta 4423163  T
Q  461 tgaccc 466  Q
    ||||||    
T  4423162 tgaccc 4423157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 415 - 462
Target Start/End: Original strand, 23565214 - 23565261
Alignment:
Q  415 ggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23565214 ggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 23565261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 5192271 - 5192330
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| |||||||||| |||  |||||||||||||| ||||||||||||||||    
T  5192271 aggctaaacttcacttttcgccccctatgtttcaaaatgttgcaattttggccccctatt 5192330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 462
Target Start/End: Complemental strand, 7117422 - 7117246
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagga 384  Q
    |||||||||||||| | ||| || ||   ||| |||||||| |||||||||||| || ||||||        | ||||||||||||||  ||||||||      
T  7117422 ttttaggctaaactgcacttatcaccacttaagtttcaaaaagttgcgattttgaccacctattaaaaaaaatggcaaaagtgacccc--atgtttagag 7117325  T
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||||||| |  |||||| ||||| ||| || | |||| ||| ||||||||||||||||||||| ||||||    
T  7117324 aaatatgctcttttgacccactaacagaaggggaatgtgttcttttaaccccttatctttacaaaaagttgcaattatg 7117246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 15869349 - 15869395
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  15869349 cttttcgccctctaaattttaaaatgttgcgattttggtcccctatt 15869395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 462
Target Start/End: Original strand, 1824676 - 1824777
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 457  Q
    ||||||||||||||  ||||||||| |||||||||||||||| |  ||||||||||| ||||||| | |||| || |||||||||  |||||||||||||    
T  1824676 gcaaaagtgacccc--atgtttagggaaatatgctcttttga-cccctaacataaggaaaatatgatcttttaacttcttatcttctcaaaaagttgcga 1824772  T
Q  458 ttatg 462  Q
     ||||    
T  1824773 gtatg 1824777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 462
Target Start/End: Original strand, 1859121 - 1859222
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 457  Q
    ||||||||||||||  ||||||||| |||||||||||||||| |  ||||||||||| ||||||| | |||| || |||||||||  |||||||||||||    
T  1859121 gcaaaagtgacccc--atgtttagggaaatatgctcttttga-cccctaacataaggaaaatatgatcttttaacttcttatcttctcaaaaagttgcga 1859217  T
Q  458 ttatg 462  Q
     ||||    
T  1859218 gtatg 1859222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 33895684 - 33895619
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||||| | |||||||||| ||| |||| |||||||||| ||||||| ||||||||    
T  33895684 atttttaggctaaactgcacttttcgccccctatattttaaaatgttgcaattttggtcccctatt 33895619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 4518857 - 4518927
Alignment:
Q  278 tagttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| || |||||||||| | | |||||||||| ||| |||| ||||| |||||||||||||||||||||    
T  4518857 tagtttttattaggctaaagtgcacttttcgccccctatattttaaaatattgcgattttggccccctatt 4518927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 44147285 - 44147216
Alignment:
Q  279 agttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| |||||||||||| | | ||||||||||  ||  ||||||||| |||||||||||||||||||||    
T  44147285 agttaattttaggctaaagtgcacttttcgccccatatgtttcaaaatattgcgattttggccccctatt 44147216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 4807598 - 4807658
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | |||||||||  |||  |||||||||||||| ||||||||||||||||    
T  4807598 taggctaaactgcacttttcgcctcctatgtttcaaaatgttgcaattttggccccctatt 4807658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 462
Target Start/End: Complemental strand, 41385702 - 41385622
Alignment:
Q  383 gaaaatatgctcttttgagcttctaacataagggaaatatg-ctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||| |||||||||   ||||||||||||||||||||  ||||||||| |||||| |  |||||||||| |||||||    
T  41385702 gaaaatatactcttttgactctctaacataagggaaatatgattttttgaccccttatcatctcaaaaagttgtgattatg 41385622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 462
Target Start/End: Complemental strand, 18253117 - 18253018
Alignment:
Q  361 aaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg-ctttttgacctcttatctttacaaaaagttgcgatt 459  Q
    ||||||||||||  ||||||||| ||||||| | |||||| |   ||||||||||||||||||  ||||||||| ||||||||  |||||||||| ||||    
T  18253117 aaaagtgacccc--atgtttagggaaatatgtttttttgaccca-taacataagggaaatatgattttttgaccccttatcttctcaaaaagttgtgatt 18253021  T

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Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 426 - 468
Target Start/End: Complemental strand, 41688278 - 41688236
Alignment:
Q  426 ttttgacctcttatctttacaaaaagttgcgattatgacccat 468  Q
    |||||||| ||||||||  ||||||||||||||||||||||||    
T  41688278 ttttgaccccttatcttctcaaaaagttgcgattatgacccat 41688236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 18881501 - 18881562
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| | ||||||| ||  ||| |||  ||||||||||||||||||||||||||    
T  18881501 ttaggctaaactgcgcttttcgacccttaagttttgaaatgttgcgattttggccccctatt 18881562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 32968453 - 32968510
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccc 344  Q
    |||||||||| | | |||||| ||| |||| |||||||| ||||||||||||||||||    
T  32968453 ttaggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccc 32968510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 38612216 - 38612277
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| |  ||||  ||| |||| ||||| |||||||||||||||||||||||||    
T  38612216 ttaggctaaactgcagttttgaccccctaactttcacaatgttgcgattttggccccctatt 38612277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 38613478 - 38613417
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| |  ||||  ||| |||| ||||| |||||||||||||||||||||||||    
T  38613478 ttaggctaaactgcagttttgaccccctaactttcacaatgttgcgattttggccccctatt 38613417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 38974784 - 38974849
Alignment:
Q  279 agttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccc 344  Q
    |||| ||||| ||||||| | | |||||| ||| |||| |||||||| ||||||||||||||||||    
T  38974784 agtttttttttggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccc 38974849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 39005882 - 39005947
Alignment:
Q  279 agttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccc 344  Q
    |||| ||||| ||||||| | | |||||| ||| |||| |||||||| ||||||||||||||||||    
T  39005882 agtttttttttggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccc 39005947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 2053145 - 2053197
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttg 338  Q
    |||||| |||||| | ||||||||||||||| ||| |||||||||| ||||||    
T  2053145 tttaggttaaactactcttttcgccctctaagttttaaaatgttgcaattttg 2053197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 462
Target Start/End: Original strand, 16233581 - 16233629
Alignment:
Q  415 ggaaatatgcttttt-gacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||| ||| | |||||||||||||||||||||||| ||||||    
T  16233581 ggaaatatgctctttcgccctcttatctttacaaaaagttgcaattatg 16233629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 19391386 - 19391445
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | |||||||||| |||  |||||||||||||| ||||||| ||||||||    
T  19391386 taggctaaactgcacttttcgccc-ctatgtttcaaaatgttgcaattttggtcccctatt 19391445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 30784259 - 30784323
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||| ||| |||||||| ||||| |||| |||  |||||||||||||| ||||||| ||||||||    
T  30784259 ttttaaggttaaacttcactttttgccccctaggtttcaaaatgttgcaattttggtcccctatt 30784323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 1e-57; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 289 - 466
Target Start/End: Original strand, 32451725 - 32451902
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||        | |||||||||||||||||||||||   ||||    
T  32451725 aggctaaacttcacttttcgccctctaagtttcaaaatgttgtgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttatagaaat 32451824  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32451825 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 32451902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 289 - 461
Target Start/End: Original strand, 31210793 - 31210965
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| ||||||||||||||| ||| |||||||||||||||||||| ||||||        |  |||||||||||||||||||||||||||||    
T  31210793 aggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttggcctcctattaaaaaaaatgacaaaagtgaccccctatgtttaggaaaat 31210892  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattat 461  Q
    |||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31210893 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattat 31210965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 287 - 465
Target Start/End: Original strand, 24051006 - 24051183
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| ||    
T  24051006 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaa-tggcaaaagtgaccccctatgtttagggaa 24051104  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacc 465  Q
    |||||||||||||| || |||||||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||||    
T  24051105 atatgctcttttgacctcctaacataagagaaatatactttttgaccccttatatttacaaaaagttgcgattatgacc 24051183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 290 - 462
Target Start/End: Complemental strand, 26710611 - 26710439
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||        | ||||||| ||||||||||||||||| |||||    
T  26710611 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagcgaccccctatgtttagggaaata 26710512  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||| || ||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  26710511 tgctcttttgacctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 26710439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 288 - 462
Target Start/End: Complemental strand, 4597711 - 4597537
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||        | |||||| |||||||||||||||||| |||    
T  4597711 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctattataaaaaatggcaaaaatgaccccctatgtttagggaaa 4597612  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  4597611 tatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcaattatg 4597537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 290 - 462
Target Start/End: Original strand, 24603361 - 24603533
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||| ||||||| ||| ||| |||||||||||||||||||||  ||||||||        | ||||||||||||||||||||||||| |||||    
T  24603361 ggctaaacttcacttttcgtcctttaagtttcaaaatgttgcgattttgctcccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 24603460  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24603461 tgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 24603533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 287 - 462
Target Start/End: Original strand, 18791355 - 18791529
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||| |||||        | ||||||||||||||||||||||||| ||    
T  18791355 ttaggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttggccctctattaaaaaaa-tggcaaaagtgaccccctatgtttagggaa 18791453  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||||| |  ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  18791454 atatgctcttttgaccccctaacataagggaaatatgctttttgacccctcatctttacaaaaagttgcgattatg 18791529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 290 - 466
Target Start/End: Original strand, 25819685 - 25819860
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    |||||||| || ||||||||||||||| ||| |||||||||| ||||||||||||||||        | |||||||||||||| |||||||||| |||||    
T  25819685 ggctaaacctcacttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgacccc-tatgtttagggaaata 25819783  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    | ||||| ||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25819784 tactcttctgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 25819860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 287 - 466
Target Start/End: Complemental strand, 22968460 - 22968283
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    |||||||||| ||| ||||||||||  ||| |||||||||||||||||||||||||| ||||        | ||||||||||||||||||||||||| ||    
T  22968460 ttaggctaaagttcacttttcgccccttaagtttcaaaatgttgcgattttggcccc-tattaaaaaaaatggcaaaagtgaccccctatgtttagggaa 22968362  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  22968361 atatgctcttttgaccccctaacataagggaaatatgttttttgacc-cttatctttacaaaaagttgcgattatgaccc 22968283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 287 - 466
Target Start/End: Original strand, 23819933 - 23820110
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    |||||||||| ||| ||||||||||  ||| |||||||||||||||||||||||||| ||||        | ||||||||||||||||||||||||| ||    
T  23819933 ttaggctaaagttcacttttcgccccttaagtttcaaaatgttgcgattttggcccc-tattaaaaaaaatggcaaaagtgaccccctatgtttagggaa 23820031  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  23820032 atatgctcttttgaccccctaacataagggaaatatgttttttgacc-cttatctttacaaaaagttgcgattatgaccc 23820110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 304 - 462
Target Start/End: Original strand, 15298500 - 15298657
Alignment:
Q  304 tttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagct 403  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||        | ||||||||||||||||||||||||| |||||||||||||||| ||    
T  15298500 tttcgccctctaagtttcaaaatgttgcgagtttggccccctattaaaaaaa-tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacct 15298598  T
Q  404 tctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
     ||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||    
T  15298599 cctaacataaggaaaatatgttttttgatcccttatctttacaaaaagttgcgattatg 15298657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 286 - 466
Target Start/End: Original strand, 8412754 - 8412934
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaa 385  Q
    ||||||||||| | | |||| |||||  ||| ||||||||||||||||||||||| |||||||        | ||||||| ||||||||||||||||  |    
T  8412754 tttaggctaaagtccactttccgccccttaagtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagcgaccccctatgtttagaga 8412853  T
Q  386 aatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  8412854 aatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 8412934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 285 - 462
Target Start/End: Original strand, 34833920 - 34834097
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagga 384  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||| |||     ||||||||        | |||||||||||||||||||||||||     
T  34833920 ttttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattcctcgcccctattaaaaaaaatggcaaaagtgaccccctatgtttaggg 34834019  T
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||  |||||||||||||||||| | ||||||    
T  34834020 aaatatgctcttttgacctcctaacataagggaaatatgttttttgacccgttatctttacaaaaagttacaattatg 34834097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 287 - 462
Target Start/End: Complemental strand, 14572483 - 14572310
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    |||||||||| | | ||||||||||||||| ||| ||||| |||| ||||||||||||||||        | |||||||||||||| |||||||||| ||    
T  14572483 ttaggctaaagtccacttttcgccctctaagttttaaaatattgcaattttggccccctattaaaaaaa-tggcaaaagtgacccc-tatgtttagggaa 14572386  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  14572385 atatgctcttttgacatcctaacataagggaaatatgctttttgaccccttatctttataaaaagttgcgattatg 14572310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 359 - 466
Target Start/End: Original strand, 3118748 - 3118855
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||| ||||||||||| |||||||||||||||| |  ||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  3118748 gcaaaagtgaccctctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacctcttatctttacaaaaatttgcgat 3118847  T
Q  459 tatgaccc 466  Q
    ||||||||    
T  3118848 tatgaccc 3118855  T

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Target: chr6; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 290 - 423
Target Start/End: Complemental strand, 18749432 - 18749299
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||        | ||||||||||||||||||||||||| |||||    
T  18749432 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 18749333  T
Q  390 tgctcttttgagcttctaacataagggaaatatg 423  Q
    ||||||||||| ||  ||||||||||||||||||    
T  18749332 tgctcttttgacctcttaacataagggaaatatg 18749299  T

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Target: chr6; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 369 - 462
Target Start/End: Complemental strand, 35102716 - 35102623
Alignment:
Q  369 ccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  35102716 ccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatg 35102623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 360 - 466
Target Start/End: Complemental strand, 19282445 - 19282339
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgatt 459  Q
    ||||||||||||| |||||||| | ||||||||| |||||| || |||||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  19282445 caaaagtgaccccttatgtttaagtaaatatgctattttgaactcctaacataagggaaatatgcattttgaccccttatcttttcaaaaagttgcgatt 19282346  T
Q  460 atgaccc 466  Q
    |||||||    
T  19282345 atgaccc 19282339  T

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Target: chr6; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 290 - 454
Target Start/End: Original strand, 22269410 - 22269570
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||| | ||||||| ||||||| ||||||||| ||||||||||||||| |||||        | |||||||||||||| |||||||||| |||||    
T  22269410 ggctaaactgcacttttcgtcctctaagtttcaaaatattgcgattttggccctctattaaaaaa--tggcaaaagtgacccc-tatgtttagggaaata 22269506  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttg 454  Q
    || |||||||| | | |||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  22269507 tgttcttttgaccct-taacataagggaaatatgttttttgaccccttatctttacaaaaagttg 22269570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 289 - 453
Target Start/End: Complemental strand, 32682581 - 32682419
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| |||||| |||||||| ||| |||||||||| |||||||  | |||||        |||||||||||||||| |||||||||| ||||    
T  32682581 aggctaaacttcacttttcaccctctaagttttaaaatgttgcaattttggttctctattaaaaaaa-tagcaaaagtgacccc-tatgtttagggaaat 32682484  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagtt 453  Q
    |||||||||||| ||  |||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  32682483 atgctcttttgacctcataacataaaggaaatatgttttttgaccccttatctttacaaaaagtt 32682419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 462
Target Start/End: Complemental strand, 4013968 - 4013798
Alignment:
Q  291 gctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatat 390  Q
    |||||||| | ||||||| || |||| |||||||||||||||||||||||||||||||        |  |||||||||||||| ||||||||| ||||||    
T  4013968 gctaaactgcacttttcgtcccctaagtttcaaaatgttgcgattttggccccctattaaaaaaa-tgtcaaaagtgaccccc-atgtttagggaaatat 4013871  T
Q  391 gctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||| |  |||| |||||||||||||| | |||||||| ||||||||  ||||| ||||||||||||    
T  4013870 gctcttttgaccccctaatataagggaaatatgatcttttgaccccttatcttctcaaaatgttgcgattatg 4013798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 359 - 457
Target Start/End: Original strand, 4370967 - 4371065
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 457  Q
    ||||||||||||| | ||||||||| |||||||||||||||| |  |||||||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  4370967 gcaaaagtgaccctccatgtttagggaaatatgctcttttga-cccctaacataagggaaatatgctcctttgaccccttatctttacaaaaagttgcga 4371065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 462
Target Start/End: Complemental strand, 18749305 - 18749228
Alignment:
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||| || ||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  18749305 aaatatgttcatttgacctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgtgattatg 18749228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 360 - 468
Target Start/End: Complemental strand, 16415564 - 16415456
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||| |||||||||| ||||||  |||||||| |  ||||||||||||||||||| | |||||||| ||||||||   |||||||||||||    
T  16415564 caaaagtgacccc-tatgtttagggaaatatattcttttgaccgcctaacataagggaaatatgatattttgaccgcttatcttctaaaaaagttgcgat 16415466  T
Q  459 tatgacccat 468  Q
    ||| ||||||    
T  16415465 tataacccat 16415456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 471
Target Start/End: Complemental strand, 24615908 - 24615817
Alignment:
Q  379 ttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccatatt 471  Q
    ||||| |||||||||||||||| |  |||||||| | ||||||||||||||||||  || ||||||| |||||||||||||||||||| ||||    
T  24615908 ttagggaaatatgctcttttgaccc-ctaacatatgagaaatatgctttttgacccattctctttactaaaagttgcgattatgacccttatt 24615817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 359 - 468
Target Start/End: Original strand, 12427300 - 12427411
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg-ctttttgacctcttatctttac-aaaaagttgcg 456  Q
    |||||||||| |||| ||||||||| |||||||||||||||| |   |||||||| |||||||||  ||||| |||  |||||||||| |||||||||||    
T  12427300 gcaaaagtgatcccccatgtttagggaaatatgctcttttgaaccattaacataaaggaaatatgttttttttaccctttatctttacaaaaaagttgcg 12427399  T
Q  457 attatgacccat 468  Q
    ||| ||||||||    
T  12427400 attttgacccat 12427411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 405 - 466
Target Start/End: Original strand, 2636891 - 2636953
Alignment:
Q  405 ctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  2636891 ctaacataaggtaaatatgctattttgaccccttatttttacaaaaagttgcgattatgaccc 2636953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 466
Target Start/End: Original strand, 26240025 - 26240133
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttc-taacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 457  Q
    |||||||||||||  ||||||| | |||||||||||||||| |  | |||||||||||||||||| | |||||||| ||||||||   |||||||||| |    
T  26240025 caaaagtgacccctcatgtttacggaaatatgctcttttgacccccttaacataagggaaatatgatcttttgaccccttatcttctaaaaaagttgcaa 26240124  T
Q  458 ttatgaccc 466  Q
    |||||||||    
T  26240125 ttatgaccc 26240133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 462
Target Start/End: Original strand, 9241732 - 9241824
Alignment:
Q  369 ccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||| || ||||| ||||||| |||||||| |  ||||||||||||||||||| | |||||||| ||||||||  ||||||||||||||||||    
T  9241732 ccccctttgcttagggaaatatgttcttttgacc--ctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatg 9241824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 35102768 - 35102713
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccc 344  Q
    ||||| |||||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  35102768 aggctcaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccc 35102713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 417 - 466
Target Start/End: Complemental strand, 23124898 - 23124848
Alignment:
Q  417 aaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  23124898 aaatatgctcttttgaccccttatctttacaaaaagttgcgattatgaccc 23124848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 347
Target Start/End: Complemental strand, 6842391 - 6842327
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctat 347  Q
    |||||||||||||| | | |||||| |||||||| |||||||| ||||| |||||||||||||||    
T  6842391 atttttaggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctat 6842327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 303 - 423
Target Start/End: Complemental strand, 2059111 - 2058993
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagc 402  Q
    ||||||| | |||||||| ||||||||||||||||| |||||||||        | |||||||||||||   ||||||||| ||||||||| ||||||      
T  2059111 ttttcgctccctaaattttaaaatgttgcgattttgaccccctatt--aaaaaatggcaaaagtgacccttcatgtttagggaaatatgctattttgaca 2059014  T
Q  403 ttctaacataagggaaatatg 423  Q
      |||||||||||||||||||    
T  2059013 ccctaacataagggaaatatg 2058993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 15298775 - 15298730
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||    
T  15298775 ttttcgccctctatgtttcaaaatgttgcgattttggccccttatt 15298730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 464
Target Start/End: Complemental strand, 12291607 - 12291547
Alignment:
Q  405 ctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgac 464  Q
    ||||||||||||||||||| | ||||||||  |||||||  ||||||||||||||||||||    
T  12291607 ctaacataagggaaatatgatcttttgaccctttatcttctcaaaaagttgcgattatgac 12291547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 462
Target Start/End: Complemental strand, 20863896 - 20863860
Alignment:
Q  426 ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||| ||||||||||||||||||||||||||||    
T  20863896 ttttgaccccttatctttacaaaaagttgcgattatg 20863860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 23124996 - 23124932
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||| | | |||||| ||  |||||||| |||||||||||||||||| ||||||||    
T  23124996 tttttaggctaaattgcacttttcacctcctaaattttaaaatgttgcgattttggtcccctatt 23124932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 35102489 - 35102549
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | | |||||||||| |||  |||||||||||||||||||| ||||||||||    
T  35102489 taggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttagccccctatt 35102549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 4597417 - 4597463
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| |||  |||||||||||||||||||||| ||||||||    
T  4597417 cttttcgccccctatgtttcaaaatgttgcgattttggtcccctatt 4597463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 12291430 - 12291475
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||| || |||| |||||||||||||||||||||||||| ||||    
T  12291430 ttttcgtcccctaagtttcaaaatgttgcgattttggccccttatt 12291475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Complemental strand, 20863932 - 20863891
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttga 400  Q
    |||||||||||| || |||||||||||| |||||||||||||    
T  20863932 gcaaaagtgacctcccatgtttaggaaattatgctcttttga 20863891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 8821869 - 8821929
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccccta 346  Q
    ||||||||||| | | |||||| |||||||| ||||||||  |||| ||||||||||||||    
T  8821869 tttaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccccta 8821929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 462
Target Start/End: Original strand, 14195631 - 14195732
Alignment:
Q  361 aaaagtgaccccctatgtttaggaaaatatgctcttttgagct-tctaacataagggaaatatgctttttga-cctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||  ||||| ||| ||||||| ||||||   || |||||||| ||||||||||| | ||| | || ||||| ||||||||||||||||||    
T  14195631 aaaagtgacccc--atgttaagggaaatatgttctttttgactctctaacatgagggaaatatggtcttttagccccttatttttacaaaaagttgcgat 14195728  T
Q  459 tatg 462  Q
    ||||    
T  14195729 tatg 14195732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 18749095 - 18749155
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | ||||||||||  ||  ||| |||||||||| ||||||||||||||||    
T  18749095 taggctaaactgcacttttcgccccttatgttttaaaatgttgcaattttggccccctatt 18749155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 1e-57; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 289 - 462
Target Start/End: Complemental strand, 13397980 - 13397807
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||||||||        | ||||||||||||||||||||||||| ||||    
T  13397980 aggctaaacttcacttttcgccctctaagtttcaaaatattgcaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 13397881  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13397880 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 13397807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 285 - 466
Target Start/End: Complemental strand, 41877333 - 41877156
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagga 384  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||        | |||||||||||||||||||||||||     
T  41877333 ttttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggctccctattaaaaaa--tggcaaaagtgaccccctatgtttaggg 41877236  T
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  41877235 aaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttac--aaagttgcgattatgaccc 41877156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 290 - 462
Target Start/End: Original strand, 4357252 - 4357424
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||| || |||||||        | ||||||||||| |||||| |||||| |||||    
T  4357252 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttagctccctattaaaaaaaatggcaaaagtgacaccctatatttagggaaata 4357351  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4357352 tgctcttttgaccttctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 4357424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 287 - 468
Target Start/End: Complemental strand, 5304652 - 5304473
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||| |||||        | |||||||||||||| |||||||||| ||    
T  5304652 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccctctattaaaaaaa-tggcaaaagtgacccc-tatgtttagggaa 5304555  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccat 468  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  5304554 atatgctcttttgacctcctaacataaggaaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccat 5304473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 285 - 466
Target Start/End: Original strand, 35475286 - 35475465
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagga 384  Q
    ||||||||||||||||  |||||||||||||| ||| ||||||||||||||||||| |||||||        | |||||||||||||  ||||||||||     
T  35475286 ttttaggctaaacttcatttttcgccctctaagttttaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagtgaccc--tatgtttaggg 35475383  T
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  35475384 aaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagtagcgattatgaccc 35475465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 281 - 466
Target Start/End: Complemental strand, 9195975 - 9195792
Alignment:
Q  281 ttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgttt 380  Q
    ||||| |||||||||||  | |||||||||| ||||||||||||||||||||||||||| ||||||||         | |||||||||||||||||||||    
T  9195975 ttattcttaggctaaacaccacttttcgccccctaaatttcaaaatgttgcgattttggtcccctattaaaaaaatga-caaaagtgaccccctatgttt 9195877  T
Q  381 aggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||| |||||||||||||||| |   |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  9195876 agggaaatatgctcttttgaccca-taacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 9195792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 284 - 466
Target Start/End: Original strand, 55780381 - 55780562
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagg 383  Q
    |||||||||||||||||  |||||||||  ||| |||  ||||||||||||||||||||||||||        | |||||||||||||||||||||||||    
T  55780381 tttttaggctaaacttcatttttcgccccttaagttttcaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagg 55780480  T
Q  384 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
     |||||||||||||||| |  ||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  55780481 gaaatatgctcttttgaccc-ctaacctaaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 55780562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 284 - 466
Target Start/End: Original strand, 55844561 - 55844742
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagg 383  Q
    |||||||||||||||||  |||||||||  ||| |||  ||||||||||||||||||||||||||        | |||||||||||||||||||||||||    
T  55844561 tttttaggctaaacttcatttttcgccccttaagttttcaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagg 55844660  T
Q  384 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
     |||||||||||||||| |  ||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  55844661 gaaatatgctcttttgaccc-ctaacctaaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 55844742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 290 - 463
Target Start/End: Original strand, 25011735 - 25011908
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||| | ||||||| || |||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| |||||    
T  25011735 ggctaaactccacttttcgtcccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 25011834  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatga 463  Q
    ||||||||||| |  ||||||||||||  ||||| ||||||||| |||||||||||||||||||| ||||||||    
T  25011835 tgctcttttgaccccctaacataagggggatatgttttttgaccccttatctttacaaaaagttgggattatga 25011908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 288 - 466
Target Start/End: Complemental strand, 43793936 - 43793759
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||| | ||||| |||  |||| |||||||||||||||||||||||||||||||        | |||||||||||||| |||||||||| |||    
T  43793936 taggctaaactccactttttgccgcctaagtttcaaaatgttgcgattttggccccctattaaaaaaa-tggcaaaagtgaccccatatgtttagggaaa 43793838  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||||||| || ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||||||    
T  43793837 tatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatatttacaaaaagttgcgaatatgaccc 43793759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 359 - 461
Target Start/End: Complemental strand, 15059053 - 15058951
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15059053 gcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 15058954  T
Q  459 tat 461  Q
    |||    
T  15058953 tat 15058951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 284 - 461
Target Start/End: Original strand, 41034629 - 41034807
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaa-tttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttag 382  Q
    ||||||||||||||||| |||||||| || |||| |||||||||||||| |||||| |||| ||||        | ||||||||||||||||||| | ||    
T  41034629 tttttaggctaaacttcacttttcgcactttaaagtttcaaaatgttgcaattttgaccccttattaaaaaaaatggcaaaagtgaccccctatgctcag 41034728  T
Q  383 gaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattat 461  Q
    | ||||||| |||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  41034729 ggaaatatgatcttttgacctcctaacataagggaaatatgctttttgaccccttatttttacaaaaagttgcgattat 41034807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 290 - 466
Target Start/End: Complemental strand, 4433485 - 4433311
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||| |||||||||| |||| ||| |||||||||||||||||||||| ||||          ||||||||||||||||||||||||| |||||    
T  4433485 ggctaaacttcacttttcgccc-ctaagttttaaaatgttgcgattttggcccc-tattaaaaaaaaaggcaaaagtgaccccctatgtttagggaaata 4433388  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||||| |  ||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  4433387 tgctcttttgaccccctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgtgattatgaccc 4433311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 290 - 459
Target Start/End: Original strand, 2931321 - 2931490
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||| ||||||||||||||| ||| |||||||||| |||||||  | |||||        | | ||||||||||||||||||||||| |||||    
T  2931321 ggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggttctctattaaaaaaaatggtaaaagtgaccccctatgtttagggaaata 2931420  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgatt 459  Q
    ||||||||||| ||  |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||    
T  2931421 tgctcttttgacctcataacataaaggaaatatgctttttgaccccttatctttacaaaaaattgcgatt 2931490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 289 - 462
Target Start/End: Complemental strand, 6789263 - 6789090
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||| ||        | ||||||||||||||||||||||||| ||||    
T  6789263 aggctaaacttcacttttcgccctttaagtttcaaaatgttgcgattttggccccctgttaaataaaatggcaaaagtgaccccctatgtttagggaaat 6789164  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||| ||| || || ||||||| || |||| ||| |||||||||  ||||||||||||||| |||||||||||    
T  6789163 atgctgtttcgacctcctaacatgagagaaaaatgttttttgacccgttatctttacaaaaaattgcgattatg 6789090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 290 - 462
Target Start/End: Original strand, 52838231 - 52838399
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||||||| || | ||||        | |||||| ||||||||||||||||||||| ||    
T  52838231 ggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgacctc-tattaaaaaaa-tggcaaaaatgaccccctatgtttaggaaa-ta 52838327  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||| || |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  52838328 tgctcttttgacctcctaacatacgggaaatatgctttttgacc-cttatctttacaaaaagttgcgattatg 52838399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 359 - 461
Target Start/End: Complemental strand, 13826653 - 13826552
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 458  Q
    |||||||||||||| ||||||| || |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13826653 gcaaaagtgacccc-tatgtttcgggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgat 13826555  T
Q  459 tat 461  Q
    |||    
T  13826554 tat 13826552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 288 - 461
Target Start/End: Complemental strand, 1588718 - 1588546
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||| | ||||||| ||  ||| ||| |||||||||||||||| ||| | ||||        | | |||||||||| |||||||||||| |||    
T  1588718 taggctaaactccacttttcgtcccttaagttttaaaatgttgcgattttcgcctcatatttaaaaaaatggaaaaagtgacctcctatgtttagggaaa 1588619  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattat 461  Q
    ||||||||||||| |  ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  1588618 tatgctcttttgaccc-ctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattat 1588546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 283 - 466
Target Start/End: Complemental strand, 19232655 - 19232471
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttag 382  Q
    |||||| ||||||||| | ||||| |||| |||| ||||||||||||| |||||||| | ||||||        | |||||||||| ||| |||||||||    
T  19232655 attttttggctaaactccactttttgccccctaagtttcaaaatgttgtgattttggtcacctattaaaaaaaatggcaaaagtgatcccatatgtttag 19232556  T
Q  383 gaaaatatgctcttttgagcttctaacataagggaaatatgctttttg-acctcttatctttacaaaaagttgcgattatgaccc 466  Q
    | ||||||||||||||||    ||||||||||| ||||||| |||||  ||| ||||||||||||||||||||||||||||||||    
T  19232555 ggaaatatgctcttttgactccctaacataaggaaaatatgttttttttaccccttatctttacaaaaagttgcgattatgaccc 19232471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 466
Target Start/End: Original strand, 45633435 - 45633613
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    |||||||||||| | |||||||||| |||| ||||||||| ||||||||||| |||| ||||        | ||||||||||| ||||||||||||| ||    
T  45633435 ttaggctaaactacacttttcgccccctaagtttcaaaatattgcgattttgacccc-tattaaaaaaaatggcaaaagtgactccctatgtttagggaa 45633533  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||| |||| |  ||||||||| ||||||||||| |||||||| |||||||||  ||||||||| |||||||||||    
T  45633534 atatgctctattgaccgcctaacataa-ggaaatatgctcttttgaccccttatcttttaaaaaagttgtgattatgaccc 45633613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 384 - 468
Target Start/End: Original strand, 15795411 - 15795495
Alignment:
Q  384 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccat 468  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||||||| |||||||| |||||||||| |||||||||||||    
T  15795411 aaaatatgctcttttgaactcctaacataagggaaataggctttttgaccttttatcttttcaaaaagttgggattatgacccat 15795495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 462
Target Start/End: Original strand, 27018229 - 27018386
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgag 401  Q
    |||||||||  |||||||| ||||||||||||||||| ||||||| |        | |||||||||||||  |||||||||| ||||||||||||||||     
T  27018229 cttttcgcctcctaaattttaaaatgttgcgattttgaccccctaataaaaaa--tggcaaaagtgaccca-tatgtttagggaaatatgctcttttgac 27018325  T
Q  402 cttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |  |||||| |||||||||||| ||||||||| |||||| |||||||||||||| ||||||    
T  27018326 cccctaacaaaagggaaatatgttttttgaccccttatccttacaaaaagttgcaattatg 27018386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 18259417 - 18259357
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18259417 taggctaaacttcacttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 18259357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 289 - 400
Target Start/End: Complemental strand, 25618901 - 25618790
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| |||| |||||||||| |||||||||||||| |||||| |||||||||        | ||||||||||||||||| ||||||| ||||    
T  25618901 aggctaaacttcactttgcgccctctaagtttcaaaatgttgcaattttgaccccctattaagaaaaatggcaaaagtgaccccctaagtttagggaaat 25618802  T
Q  389 atgctcttttga 400  Q
    ||||||||||||    
T  25618801 atgctcttttga 25618790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 357 - 466
Target Start/End: Original strand, 23362500 - 23362607
Alignment:
Q  357 tagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcg 456  Q
    ||||||||| |||||| |||  ||||| ||||||| |||||||| | | |||||||||| |||||||||||||   ||||||||||||||||||||||||    
T  23362500 tagcaaaagcgaccccatat--ttagggaaatatgttcttttgaccctttaacataaggaaaatatgctttttagtctcttatctttacaaaaagttgcg 23362597  T
Q  457 attatgaccc 466  Q
    ||||||||||    
T  23362598 attatgaccc 23362607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 360 - 460
Target Start/End: Original strand, 4098726 - 4098827
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||||||||||| || |||||||||||||||| |  ||||||||||||||||||| | |||||||| ||||||||  ||||||||||| ||    
T  4098726 caaaagtgaccccctatgttttgggaaatatgctcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcaat 4098825  T
Q  459 ta 460  Q
    ||    
T  4098826 ta 4098827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 2715930 - 2715843
Alignment:
Q  380 taggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccat 468  Q
    |||| ||||||| |||||||| |  |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  2715930 tagggaaatatgatcttttgaccc-ctaacatatgggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccat 2715843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 9397219 - 9397367
Alignment:
Q  318 tttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataaggga 417  Q
    ||||||||||||||||||||||  ||||| |        | |||||||||| | || |||| |||| |||||||||||||||| | |||||||||| |||    
T  9397219 tttcaaaatgttgcgattttggaaccctagtaaaaaaaatggcaaaagtgatctcccatgtatagggaaatatgctcttttgaccctctaacataaagga 9397318  T
Q  418 aatatg-ctttttgacctcttatctttacaaaaagttgcgattatgacc 465  Q
    ||||||  ||||| |||  |||||||||||||||||||  |||||||||    
T  9397319 aatatgtttttttaaccctttatctttacaaaaagttgtcattatgacc 9397367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 454
Target Start/End: Original strand, 15734394 - 15734562
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagg 383  Q
    |||||||| |||||| | ||||||| ||  ||| |||||||||||| |||||||||||| |||||         | |||||||||||| |||||||||||    
T  15734394 tttttaggttaaactacacttttcggcccttaagtttcaaaatgttacgattttggcccgctattaaaaaaatga-caaaagtgaccctctatgtttagg 15734492  T
Q  384 aaaatatgctcttttgagcttctaacataa-gggaaatatgctttttgacctcttatctttacaaaaagttg 454  Q
     ||||||| |||||||| |  ||||||||| ||||||||||| ||||||||  | || ||||||||||||||    
T  15734493 gaaatatgttcttttgacc--ctaacataaggggaaatatgccttttgacccgtcatgtttacaaaaagttg 15734562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 281 - 468
Target Start/End: Complemental strand, 24626529 - 24626346
Alignment:
Q  281 ttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgttt 380  Q
    |||||| ||||||||||| | ||||| || | |||| ||| |||||||||| ||||||| || |||||        | |||||||||||||     ||||    
T  24626529 ttatttataggctaaactgcactttttgctccctaagttttaaaatgttgcaattttggacctctattaacaaaaatggcaaaagtgaccc-----gttt 24626435  T
Q  381 aggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgacccat 468  Q
    ||| ||||||||||||||||     |||||||||||||||||| | |||||||  ||||||||  |||||||||| |||||||||||||    
T  24626434 agggaaatatgctcttttgactcaataacataagggaaatatgatcttttgactccttatcttctcaaaaagttgtgattatgacccat 24626346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 375 - 462
Target Start/End: Complemental strand, 51291389 - 51291301
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||| ||||||| |||||||| |  ||||||||||||||||||| | |||||||| ||||||||  |||||||||| |||||||    
T  51291389 atgtttagggaaatatgttcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgtgattatg 51291301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 43793629 - 43793689
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | |||||||||| |||  ||| |||||||||||||||||||||||||||    
T  43793629 taggctaaactgcacttttcgccccctatgttttaaaatgttgcgattttggccccctatt 43793689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 45633746 - 45633682
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| |||| |||||| ||||||||||| ||| ||| |||||||||||||||| ||||||||||    
T  45633746 ttttttggcttaacttcacttttcgccctttaagttttaaaatgttgcgattttagccccctatt 45633682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 4357543 - 4357497
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| ||| |||||||||||||||||||||| |||||||||    
T  4357543 cttttcgccccctatatttcaaaatgttgcgattttgaccccctatt 4357497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 24626221 - 24626275
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccc 343  Q
    |||||||||| | ||||||||||||||| ||| ||||||||||||||||| ||||    
T  24626221 aggctaaactgcacttttcgccctctaagttttaaaatgttgcgattttgacccc 24626275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 25618809 - 25618759
Alignment:
Q  413 agggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| |||||||| |||||||||||||||||| |||||||||    
T  25618809 agggaaatatgctcttttgaccccttatctttacaaaaagtggcgattatg 25618759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 425
Target Start/End: Original strand, 48158681 - 48158731
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct 425  Q
    ||||||||| ||||||| |||||||| | ||||||||||||||||||||||    
T  48158681 atgtttagggaaatatgatcttttgaccctctaacataagggaaatatgct 48158731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 459
Target Start/End: Complemental strand, 43336156 - 43336075
Alignment:
Q  378 tttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgatt 459  Q
    |||||| ||||||| |||||||| |||||| | | | ||||||| | | |||||||  ||||||||||||||||||||||||    
T  43336156 tttagggaaatatgttcttttgaccttctatctttatggaaataagatgtttgaccctttatctttacaaaaagttgcgatt 43336075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 4098966 - 4098902
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| ||||||||| | ||||| | ||||||| ||| ||||||||||||||||||||| |||||    
T  4098966 ttttttggctaaactgcactttttgacctctaagttttaaaatgttgcgattttggccctctatt 4098902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 4433181 - 4433241
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | |||||||||| |||  ||||| |||||||||||||||||||| ||||    
T  4433181 taggctaaactgcacttttcgccccctatgtttcataatgttgcgattttggccccttatt 4433241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 466
Target Start/End: Original strand, 33978856 - 33978908
Alignment:
Q  416 gaaatatgc-tttttgacctcttatctttac-aaaaagttgcgattatgaccc 466  Q
    ||||||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  33978856 gaaatatgcatttttggcctcttatctttacaaaaaagttgcgattatgaccc 33978908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 3927665 - 3927720
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccc 344  Q
    |||||||| | | |||||| |||||||| ||| |||||||||||||||||||||||    
T  3927665 aggctaaagtgcacttttccccctctaacttttaaaatgttgcgattttggccccc 3927720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 4099099 - 4099044
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttgg 339  Q
    ||||| ||||||||| | ||||| | ||||||||||| ||||||||||||||||||    
T  4099099 ttttttggctaaactgcactttttgacctctaaattttaaaatgttgcgattttgg 4099044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 20919333 - 20919384
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttgg 339  Q
    ||||||||||| | ||||||| || |||| ||||||||||||||||||||||    
T  20919333 taggctaaactgcacttttcgacccctaagtttcaaaatgttgcgattttgg 20919384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 25012039 - 25011980
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | |||||||||| |||  ||||| |||||||| ||||||||||||||||    
T  25012039 aggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggccccctatt 25011980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 2715731 - 2715777
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| ||| | |||||||||||||||||||||| ||||||||    
T  2715731 cttttcgccatcttagtttcaaaatgttgcgattttggtcccctatt 2715777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 3928960 - 3928902
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctat 347  Q
    |||||||| | | |||||| ||| |||| |||||||| |||||||||||||||||||||    
T  3928960 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctat 3928902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 348
Target Start/End: Complemental strand, 9397493 - 9397435
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | |||||| ||| |||| ||| ||||||||| |||||||||||||||||    
T  9397493 ggctaaactgcacttttcaccccctaagttttaaaatgttgggattttggccccctatt 9397435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 47869944 - 47869899
Alignment:
Q  303 ttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||| |||| ||| |||||||||||||| |||||||||||||||||    
T  47869944 tttttgccccctatatttcaaaatgttgtgattttggccccctatt 47869899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 13826418 - 13826478
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | | |||||||||| |||  ||| ||||||||||||||||| |||||||||    
T  13826418 taggctaaagtgcacttttcgccccctatgtttaaaaatgttgcgattttgaccccctatt 13826478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 17138592 - 17138540
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgatttt 337  Q
    |||| ||||||||| | |||||||||| |||| ||| ||||||||||||||||    
T  17138592 tttttggctaaactccacttttcgccccctaagttttaaaatgttgcgatttt 17138540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 346
Target Start/End: Complemental strand, 25685931 - 25685867
Alignment:
Q  282 tatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccccta 346  Q
    |||| |||||||||| | | |||||| |||||||| ||||||||  |||| ||||||||||||||    
T  25685931 tattattaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccccta 25685867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 110; Significance: 3e-55; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 289 - 462
Target Start/End: Complemental strand, 5954 - 5781
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| ||||||| ||||||| ||||||||| |||||||||||||||||||||        | ||||||||||||||||||||||||| ||||    
T  5954 aggctaaacttcacttttcggcctctaagtttcaaaatattgcgattttggccccctatttaaaaaaatggcaaaagtgaccccctatgtttagggaaat 5855  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  5854 atgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 5781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 5648 - 5708
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | |||||||||| |||  |||||||||||| | ||||||||| ||||||    
T  5648 taggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggcctcctatt 5708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 110; Significance: 3e-55; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 289 - 462
Target Start/End: Original strand, 61813 - 61986
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||| ||||    
T  61813 aggctaaacttcacttttcgccttctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 61912  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||  | ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  61913 atgctcttttgacatcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatg 61986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 284 - 462
Target Start/End: Original strand, 19279 - 19454
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagg 383  Q
    ||||| |||||||||   |||||||||  |||| ||||||||||||||||||||| |||||||||        | |||||||||||||| ||||||||||    
T  19279 ttttttggctaaactctacttttcgcctcctaagtttcaaaatgttgcgattttgaccccctattaaaaaaa-tggcaaaagtgacccc-tatgtttagg 19376  T
Q  384 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
     |||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19377 gaaatatgctcttttgaccc-ctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 19454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 286 - 468
Target Start/End: Complemental strand, 142254 - 142073
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaa 385  Q
    |||||| |||||||| ||||||||||||||| ||| |||||||||| ||||||| ||||||||        | |||||||||||||| |||||||||| |    
T  142254 tttaggttaaacttcacttttcgccctctaagttttaaaatgttgcaattttggtcccctattaaaaaaaatggcaaaagtgacccc-tatgtttaggga 142156  T
Q  386 aatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccat 468  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  142155 aatatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatggcccat 142073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 3e-52; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 290 - 462
Target Start/End: Original strand, 18695004 - 18695175
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||||||| |||||||||        | |||||||||||||| |||||||||| |||||    
T  18695004 ggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgacccc-tatgtttagggaaata 18695102  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18695103 tgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 18695175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 285 - 462
Target Start/End: Original strand, 245591 - 245766
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagga 384  Q
    ||||||| |||||||| ||||||||||||||| ||||||||| |||| ||||||||||||||||        | |||||||||||||| ||||||||||     
T  245591 ttttaggttaaacttcacttttcgccctctaagtttcaaaatattgcaattttggccccctattaaaaaaa-tggcaaaagtgacccc-tatgtttaggg 245688  T
Q  385 aaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  245689 aaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 245766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 289 - 462
Target Start/End: Complemental strand, 26639342 - 26639169
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| ||||||| ||||||| |||||||||||||||||||||| ||||| ||        | |||||||||||||| |||||||||| ||||    
T  26639342 aggctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttggtcccctgttaaaaaaaatggcaaaagtgaccccatatgtttagggaaat 26639243  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  26639242 atgctcttttgacctcctaacataagggaaatatgcgttttgaccccttatctttacaaaaagttgcaattatg 26639169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 284 - 462
Target Start/End: Complemental strand, 23765699 - 23765522
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagg 383  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||        |   |||||||||||| ||||||||||    
T  23765699 tttttaggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaaaatgataaaagtgacccc-tatgtttagg 23765601  T
Q  384 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
     |||||||||||||||| || ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  23765600 gaaatatgctcttttgacctcctaacataagggaaatatgctttttgatcatttatctttacaaaaagttgcgattatg 23765522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 284 - 462
Target Start/End: Complemental strand, 23815547 - 23815370
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagg 383  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||        |   |||||||||||| ||||||||||    
T  23815547 tttttaggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaaaatgataaaagtgacccc-tatgtttagg 23815449  T
Q  384 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
     |||||||||||||||| || ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  23815448 gaaatatgctcttttgacctcctaacataagggaaatatgctttttgatcatttatctttacaaaaagttgcgattatg 23815370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 288 - 473
Target Start/End: Original strand, 38408627 - 38408811
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||| | ||||||| || |||| ||||||||| |||||||||||||||||||||        | ||||||||||||||||||||||||  |||    
T  38408627 taggctaaactccacttttcgtcccctaagtttcaaaatattgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagagaaa 38408726  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacccatattct 473  Q
    ||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||| ||||    
T  38408727 tatgctcttttgacca-ctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgctattatgacccattttct 38408811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 288 - 463
Target Start/End: Original strand, 36641141 - 36641316
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||||| ||||||||| ||||| ||||||||| ||| |||||||| ||||||||        | |||||||||| |||||||||||||  |||    
T  36641141 taggctaaacttcacttttcgccttctaagtttcaaaatattgtgattttggtcccctattaaaaaaaatggcaaaagtgagcccctatgtttagagaaa 36641240  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatga 463  Q
    ||||||||||||| || |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  36641241 tatgctcttttgacctcctaacataagggaaatatgctttttgacccgttatctttataaaaagttgcgattatga 36641316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 284 - 466
Target Start/End: Complemental strand, 40428947 - 40428767
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagg 383  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| ||||        | |||||||| ||||| | ||||||||    
T  40428947 ttttttggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgacccc-tattaaaaaatatggcaaaagtcacccc-tgtgtttagg 40428850  T
Q  384 aaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
     ||||||| |||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  40428849 gaaatatgttcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaaattgcgattatgaccc 40428767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 288 - 462
Target Start/End: Complemental strand, 25557180 - 25557007
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    |||||||||||   |||||||||| |||| ||||||||||||||||||||| |||||||||        | ||||||||||||||||||||||||| |||    
T  25557180 taggctaaactctacttttcgccccctaagtttcaaaatgttgcgattttgaccccctattaaaaaaa-tggcaaaagtgaccccctatgtttagggaaa 25557082  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  25557081 tatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcaattatg 25557007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 357 - 466
Target Start/End: Original strand, 10379349 - 10379457
Alignment:
Q  357 tagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcg 456  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10379349 tagcaaaagtgacctcctatgtttaggaaaatatgctcttttgaccc-ctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcg 10379447  T
Q  457 attatgaccc 466  Q
    ||||||||||    
T  10379448 attatgaccc 10379457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 318 - 462
Target Start/End: Complemental strand, 16901271 - 16901129
Alignment:
Q  318 tttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataaggga 417  Q
    ||||||||||||||||||||| |||||||||        | |||||||||||||| |||||||||| |||||||||||||||| || |||||||||||||    
T  16901271 tttcaaaatgttgcgattttgaccccctattaaaaaaa-tggcaaaagtgacccc-tatgtttagggaaatatgctcttttgacctcctaacataaggga 16901174  T
Q  418 aatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||    
T  16901173 aatatgttttttgaccccttatctttacaaaaagttgcgattatg 16901129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 359 - 468
Target Start/End: Original strand, 19169412 - 19169521
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 458  Q
    |||||||||| ||||||||||||||||||||||||| ||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  19169412 gcaaaagtgatcccctatgtttaggaaaatatgctcatttgacctcttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaat 19169511  T
Q  459 tatgacccat 468  Q
    |||| |||||    
T  19169512 tatggcccat 19169521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 359 - 466
Target Start/End: Complemental strand, 31055549 - 31055442
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||||||||||||||| |||||||||||||||| |   |||||||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  31055549 gcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccttaacataagggaaatatgttttttgaccccttatctttacaaaaaattgcgat 31055450  T
Q  459 tatgaccc 466  Q
    ||||||||    
T  31055449 tatgaccc 31055442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 302 - 466
Target Start/End: Complemental strand, 16307769 - 16307604
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgag 401  Q
    ||||||||||| ||| ||| |||||||||||||||| || |||||||        | ||||||||||||||||||||||||| ||||||||||||||||     
T  16307769 cttttcgccctttaagttttaaaatgttgcgattttagctccctattaaaaaaaattgcaaaagtgaccccctatgtttagggaaatatgctcttttgac 16307670  T
Q  402 cttc-taacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |  | |||||||||| ||||||| ||||||||  ||||||||||||||||||||| ||||||||||    
T  16307669 ccccctaacataaggaaaatatgttttttgactccttatctttacaaaaagttgcaattatgaccc 16307604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 288 - 465
Target Start/End: Complemental strand, 10293391 - 10293216
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||| | | ||||||| || |||| ||||||||||||| ||||||| ||| |||||        | |||||| ||||||||||||||| || |||    
T  10293391 taggctaaattgcacttttcgtccactaagtttcaaaatgttgtgattttgacccgctattaaaaaa--tggcaaaaatgaccccctatgttttgggaaa 10293294  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacc 465  Q
    ||||||||||||| || ||||||||||||||||||| ||||||||  ||||||||| |||||||||||||||||||||    
T  10293293 tatgctcttttgacctcctaacataagggaaatatgttttttgactccttatctttccaaaaagttgcgattatgacc 10293216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 289 - 428
Target Start/End: Original strand, 8645796 - 8645935
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||||||| |||||||||        | |||||| |||||||| ||||||||| ||||    
T  8645796 aggctaaacttcacttttcgccctcttagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaattgacccccaatgtttagggaaat 8645895  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttt 428  Q
    |||||||||||| || ||||||||||||||||||| ||||    
T  8645896 atgctcttttgacctcctaacataagggaaatatgatttt 8645935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 289 - 454
Target Start/End: Complemental strand, 17704887 - 17704727
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||| ||||| | ||||||| || |||| ||||||||| |||||||||||||||||||||        |||||||||| ||||   ||||||||||||||    
T  17704887 aggccaaactacacttttcgtcccctaagtttcaaaatattgcgattttggccccctattaaaaaaa-tagcaaaagtaaccc---atgtttaggaaaat 17704792  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttg 454  Q
    |||||||||||| |   ||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  17704791 atgctcttttgaccca-taacataagggaaatatactttttgaccctttatctttacaaaaagttg 17704727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 361 - 466
Target Start/End: Complemental strand, 38476703 - 38476597
Alignment:
Q  361 aaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgatt 459  Q
    |||||||||||||||| |||||| |||||||||||||||| |   |||||||||||||||||| | |||||||| ||||||||  |||||||||||||||    
T  38476703 aaaagtgaccccctatatttagggaaatatgctcttttgaccccataacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgatt 38476604  T
Q  460 atgaccc 466  Q
    |||||||    
T  38476603 atgaccc 38476597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 359 - 466
Target Start/End: Original strand, 7187260 - 7187365
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 458  Q
    |||||| |||||||  ||||||||| ||||||  |||||||| | |||||||||||||||||||| ||| |||||  |||| ||||||||||||||||||    
T  7187260 gcaaaattgacccc--atgtttagggaaatatattcttttgaccctctaacataagggaaatatgttttatgaccaattatttttacaaaaagttgcgat 7187357  T
Q  459 tatgaccc 466  Q
    ||||||||    
T  7187358 tatgaccc 7187365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 361 - 468
Target Start/End: Original strand, 34125130 - 34125238
Alignment:
Q  361 aaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctt-tttgacctcttatctttacaaaaagttgcgatt 459  Q
    |||||||||||   ||||||||| |||||||||||||||| |  ||||||||||| ||||||| |  ||||||||||||||||  |||||||||||||||    
T  34125130 aaaagtgacccttcatgtttagggaaatatgctcttttgatcccctaacataaggaaaatatgatcatttgacctcttatcttctcaaaaagttgcgatt 34125229  T
Q  460 atgacccat 468  Q
    |||||||||    
T  34125230 atgacccat 34125238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 462
Target Start/End: Original strand, 7835722 - 7835881
Alignment:
Q  292 ctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatg 391  Q
    ||||||||| ||||||||||||||| ||| ||||||||| |||||||||||| ||||          ||||||||| |  |||||||||||| |||||||    
T  7835722 ctaaacttcacttttcgccctctaagttttaaaatgttgtgattttggcccc-tattg---------gcaaaagtggcatcctatgtttagggaaatatg 7835811  T
Q  392 ctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||| |   |||||||||| ||||||| ||||||||| |||||||||||||| || || |||||||    
T  7835812 ctcttttgaccca-taacataaggaaaatatgttttttgaccccttatctttacaaagaggtgggattatg 7835881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 360 - 466
Target Start/End: Complemental strand, 23040182 - 23040076
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttc--taacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcg 456  Q
    ||||||||||||   ||||||||| |||||||||||||||| || |  |||||||||||||||||| | |||||||| ||||||||  ||||||||||||    
T  23040182 caaaagtgaccc---atgtttagggaaatatgctcttttgacctcccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcg 23040086  T
Q  457 attatgaccc 466  Q
    ||||||||||    
T  23040085 attatgaccc 23040076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 462
Target Start/End: Complemental strand, 37961549 - 37961380
Alignment:
Q  293 taaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgc 392  Q
    |||||| | |||||| ||| |||| |||||||||||||| |||||||| || ||||        |||||||||||| |||| ||||||||| ||||| ||    
T  37961549 taaactgcacttttcaccccctaagtttcaaaatgttgcaattttggctcc-tattaaaaaaaatagcaaaagtgatcccccatgtttagggaaatacgc 37961451  T
Q  393 tcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||| |  ||||||||||||||| ||| | |||||||| |||| |||  ||||||||||| ||||||    
T  37961450 tcttttgaccgcctaacataagggaaaaatgatcttttgaccccttaacttctcaaaaagttgcaattatg 37961380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 462
Target Start/End: Complemental strand, 15885384 - 15885297
Alignment:
Q  374 tatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||| | |||||| ||||||||| ||  |||||||||||||||||| || |||||| ||||||||||||||||||| ||||||||    
T  15885384 tatgtttatggaaatattctcttttgacctcttaacataagggaaatatgtttgttgacc-cttatctttacaaaaagtttcgattatg 15885297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 360 - 466
Target Start/End: Original strand, 2373215 - 2373321
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 458  Q
    |||| ||||||||||||||||| |||||||||||||||||| |   |||||||||||||||||| | || ||||| ||||| ||  |||||| |||||||    
T  2373215 caaacgtgaccccctatgtttaagaaaatatgctcttttga-cccataacataagggaaatatgatattatgaccccttattttctcaaaaatttgcgat 2373313  T
Q  459 tatgaccc 466  Q
    ||||||||    
T  2373314 tatgaccc 2373321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 400
Target Start/End: Original strand, 31648055 - 31648165
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    |||||||||| | ||||||| ||  |||||||||||||||||||||||| ||||||||||        | |||||||||||||| |||||||||| ||||    
T  31648055 aggctaaactccacttttcgtcccataaatttcaaaatgttgcgattttcgccccctatt-aaaaaaatggcaaaagtgaccccttatgtttagggaaat 31648153  T
Q  389 atgctcttttga 400  Q
    ||||| ||||||    
T  31648154 atgcttttttga 31648165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 465
Target Start/End: Original strand, 462851 - 462941
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgacc 465  Q
    ||||||||| ||||||||  |||||| ||  ||| ||||| |||||||| | |||||||| |||||||||||||||||||||||||||||||    
T  462851 atgtttagggaaatatgcctttttgaccta-taatataagagaaatatgttcttttgaccccttatctttacaaaaagttgcgattatgacc 462941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 20654105 - 20654040
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||||||| | ||||||| || |||| ||||||||||||| |||||||||| ||||||    
T  20654105 atttttaggctaaactgcacttttcgacccctaagtttcaaaatgttgtgattttggcctcctatt 20654040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 468
Target Start/End: Complemental strand, 8674038 - 8673982
Alignment:
Q  413 agggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgacccat 468  Q
    ||||||||||||| |||||||| |||||||||||||||||||| |||||| ||||||    
T  8674038 agggaaatatgctcttttgaccccttatctttacaaaaagttgtgattataacccat 8673982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 462
Target Start/End: Complemental strand, 17825716 - 17825629
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||| |||||||||||||||| |  |||||||||| |||||||| | ||||||||  |||||||  ||||||||||||||||||    
T  17825716 atgtttagggaaatatgctcttttga-cccctaacataagagaaatatgttcttttgaccctttatcttgtcaaaaagttgcgattatg 17825629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 462
Target Start/End: Complemental strand, 35302223 - 35302046
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttagg 383  Q
    ||||| ||||||||| |  ||||| |||  ||| ||||||||||||||||||||| ||| |||||        | ||||||||||||||| || ||||||    
T  35302223 ttttttggctaaactgcatttttctccccttaagtttcaaaatgttgcgattttgaccctctattataaaaa-tggcaaaagtgaccccc-atatttagg 35302126  T
Q  384 aaaatatgctcttttgagcttctaacataagggaaatatg--ctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
     |||||||||||||||| |  ||||||||| | |||||||  |||||||||| ||||||||   |||||| ||||||||||    
T  35302125 gaaatatgctcttttgaccccctaacataatgtaaatatgatctttttgacc-cttatcttctaaaaaagctgcgattatg 35302046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 429
Target Start/End: Complemental strand, 41663756 - 41663689
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgcttttt 429  Q
    |||||||||||||  ||||||||| |||||||||||||||| |   |||||||||||||||||| |||||    
T  41663756 caaaagtgacccc--atgtttagggaaatatgctcttttgaccccataacataagggaaatatgattttt 41663689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 31055312 - 31055373
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||||| | |||||||||| |||  ||||| |||||||| ||||||||||||||||    
T  31055312 ttaggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggccccctatt 31055373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 18695308 - 18695248
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||| | | |||||||||| |||  ||||||||| |||||||||||||||||||||    
T  18695308 taggctaaagtgcacttttcgccccctatgtttcaaaatattgcgattttggccccctatt 18695248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 31648293 - 31648237
Alignment:
Q  285 ttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcc 341  Q
    |||||||||||||| | ||||||| || |||  ||||||||||||||||||||||||    
T  31648293 ttttaggctaaactgcacttttcgtcccctatgtttcaaaatgttgcgattttggcc 31648237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 16900996 - 16901055
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | |||||||||  |||  ||||||||||||||||||||| |||||||||    
T  16900996 aggctaaactgcacttttcgcctcctatgtttcaaaatgttgcgattttgaccccctatt 16901055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 23765418 - 23765473
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccc 343  Q
    ||||||||||| | |||||||||| |||  |||||||||||||| |||||||||||    
T  23765418 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccc 23765473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 23815266 - 23815321
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggcccc 343  Q
    ||||||||||| | |||||||||| |||  |||||||||||||| |||||||||||    
T  23815266 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccc 23815321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 348
Target Start/End: Original strand, 24025036 - 24025079
Alignment:
Q  305 ttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||| |||| ||||||||| |||||||||||||||||||||    
T  24025036 ttcgccccctaagtttcaaaatattgcgattttggccccctatt 24025079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 2373453 - 2373391
Alignment:
Q  286 tttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||| | ||||||  || |||| |||||||| ||||||||||||||| ||||||    
T  2373453 tttaggctaaactgcacttttcaacccctaagtttcaaaaagttgcgattttggcctcctatt 2373391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 38322335 - 38322377
Alignment:
Q  425 tttttgacctcttatctttac-aaaaagttgcgattatgaccc 466  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  38322335 tttttgacctcttatctttacaaaaaagttgcgattttgaccc 38322377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 40428651 - 40428697
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| |||  |||||||||||||||||||||| ||||||||    
T  40428651 cttttcgccccctatgtttcaaaatgttgcgattttggtcccctatt 40428697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 457
Target Start/End: Original strand, 20653905 - 20653987
Alignment:
Q  375 atgtttaggaaaatatgctcttttgagcttctaacataagggaaatatg--ctttttgacctcttatctttacaaaaagttgcga 457  Q
    ||||||||| |||||||||||||||| |  |||||||||| ||||||||  |||||| | ||||||||||  |||||||||||||    
T  20653905 atgtttagggaaatatgctcttttga-cccctaacataagtgaaatatgaacttttt-atctcttatcttctcaaaaagttgcga 20653987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 31576487 - 31576551
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||| ||||||||| | ||||||| || |||| |||||||||||||| |||||||  |||||||    
T  31576487 ttttttggctaaactgcacttttcgacccctaagtttcaaaatgttgcaattttggaaccctatt 31576551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 38408937 - 38408873
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||||||| |  |||||| ||||||  ||| | |||||||||||||||| ||||||||    
T  38408937 tttttaggctaaactgcatttttcgtcctctatgttttataatgttgcgattttggtcccctatt 38408873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 101; Significance: 8e-50; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 290 - 462
Target Start/End: Complemental strand, 3264 - 3092
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    |||||||| || ||||||||||||||| |||||||||||||| |||||| |||||||||        | |||||||||||| |||||||||||| |||||    
T  3264 ggctaaacctcacttttcgccctctaagtttcaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaata 3165  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  3164 tgctcttttgacctcctaacataagggaaatatgttttttgacctcttatctttacaaaaagttgcaattatg 3092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 2973 - 3019
Alignment:
Q  302 cttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||    
T  2973 cttttcgccccctatgtttcaaaatgttgcgattttggccccctatt 3019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 288 - 466
Target Start/End: Complemental strand, 2353 - 2177
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||| | | ||||||||| ||||| ||| |||| ||||||||||||||||||||||        | ||||||||||||||||||||||||| |||    
T  2353 taggctaaagtccacttttcgccttctaagttttaaaa-gttgcgattttggccccctattaaaaaaa-tggcaaaagtgaccccctatgtttagggaaa 2256  T
Q  388 tatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||||||| || |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2255 tatgctcttttgacctcctaacataagggcaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 2177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 2047 - 2106
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||||| | |||||||||| |||  ||| |||||||||| ||||||||||||||||    
T  2047 aggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttggccccctatt 2106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 287 - 466
Target Start/End: Complemental strand, 2080 - 1902
Alignment:
Q  287 ttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaa 386  Q
    ||||| |||||||| |||||| |||||||| |||||||||||||||||||||  ||| | ||        | ||||||||||||||||||||||||| ||    
T  2080 ttaggttaaacttcacttttcaccctctaagtttcaaaatgttgcgattttgatccctt-ttaaaaaaaatggcaaaagtgaccccctatgtttagggaa 1982  T
Q  387 atatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||| |||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1981 atatgctattttgaccccctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 1902  T

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Target: scaffold0062 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 283 - 466
Target Start/End: Original strand, 49652 - 49835
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttag 382  Q
    |||||||||||||| | | ||||||||||  ||| ||| |||||||||||||||||| ||||||||        | ||| |||||||||||||||||| |    
T  49652 atttttaggctaaagtccacttttcgccccttaagttttaaaatgttgcgattttggacccctattaaaaaaaatggcacaagtgaccccctatgtttcg 49751  T
Q  383 gaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    | |||||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  49752 ggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 49835  T

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Target: scaffold0062; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 283 - 466
Target Start/End: Original strand, 62191 - 62374
Alignment:
Q  283 atttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttag 382  Q
    |||||||||||||| | | ||||||||||  ||| ||| |||||||||||||||||| ||||||||        | ||| |||||||||||||||||| |    
T  62191 atttttaggctaaagtccacttttcgccccttaagttttaaaatgttgcgattttggacccctattaaaaaaaatggcacaagtgaccccctatgtttcg 62290  T
Q  383 gaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    | |||||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  62291 ggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccc 62374  T

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Target: scaffold0087 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 289 - 462
Target Start/End: Complemental strand, 25269 - 25096
Alignment:
Q  289 aggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaat 388  Q
    ||||||||||||  |||||| ||||||| ||  |||||||||||||||||||||| ||||        | | ||||||||||||||||||||||| ||||    
T  25269 aggctaaacttcatttttcgtcctctaagttctaaaatgttgcgattttggccccttattaaaaaaaatggtaaaagtgaccccctatgtttagggaaat 25170  T
Q  389 atgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||  |||||||| |||||||    
T  25169 atgctcttttgaccccctaacataagggaaatatgctttttgaccccttatctttaacaaaagttgtgattatg 25096  T

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Target: scaffold0060 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 281 - 466
Target Start/End: Original strand, 66174 - 66350
Alignment:
Q  281 ttatttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgatttt-ggccccctattnnnnnnnntagcaaaagtgaccccctatgtt 379  Q
    ||||| |||||||||||||| ||||||||||||||| ||| |||||||||| ||||| |||||||||||         |  |||| || |||| ||||||    
T  66174 ttattattaggctaaacttcacttttcgccctctaagttttaaaatgttgcaatttttggccccctatt---------aaaaaaaatggcccc-tatgtt 66263  T
Q  380 taggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    |||| ||||||||| |||||| || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  66264 tagggaaatatgctattttgacctcctaacataagggaactatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 66350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 290 - 461
Target Start/End: Original strand, 1997 - 2162
Alignment:
Q  290 ggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaata 389  Q
    ||||||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||||        | ||||||||||||||      ||||| |||||    
T  1997 ggctaaactttacttttcgccctctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgacccc------ttagggaaata 2090  T
Q  390 tgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattat 461  Q
    ||||||||||| || ||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||    
T  2091 tgctcttttgacctcctaacataagggaaacatgctttttgaccccatatctttacaaaaagttgcgattat 2162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 359 - 461
Target Start/End: Complemental strand, 3801 - 3701
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgat 458  Q
    ||||||||||||||  ||||||||| |||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  3801 gcaaaagtgacccc--atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgctttttgaccccttatctttacaaaaagtttcgat 3704  T
Q  459 tat 461  Q
    |||    
T  3703 tat 3701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 359 - 466
Target Start/End: Complemental strand, 991 - 884
Alignment:
Q  359 gcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcga 457  Q
    ||||||||||||||  ||||||||| | ||||||| |||||| |||||||||||||| ||||||||| |||||||| ||||||||||||||||||||| |    
T  991 gcaaaagtgacccca-atgtttagggatatatgctattttgaccttctaacataaggtaaatatgctcttttgaccccttatctttacaaaaagttgcaa 893  T
Q  458 ttatgaccc 466  Q
    |||||||||    
T  892 ttatgaccc 884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 754 - 814
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||||| | |||||| |||  ||| |||| ||||||||||||||||||||||||||    
T  754 taggctaaactgcacttttcaccccttaagtttcgaaatgttgcgattttggccccctatt 814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 370 - 465
Target Start/End: Original strand, 5911 - 6007
Alignment:
Q  370 cccctatgtttaggaaaatatgctcttttgagcttc-taacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgacc 465  Q
    |||||||||||||| ||||||||| |||||| |  | |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  5911 cccctatgtttagggaaatatgctattttgacccccctaacataagggaaatatgctttttgaccccttatctttataaaaagttgcgattatgacc 6007  T

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Target: scaffold0002 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 468
Target Start/End: Original strand, 455102 - 455205
Alignment:
Q  366 tgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgac 464  Q
    |||||||| ||||||||||||||||| |||||| | |  ||||||||||||||||||| | |||||||| ||||||||  | ||||||||||||||||||    
T  455102 tgaccccccatgtttaggaaaatatgttcttttaaccccctaacataagggaaatatgatcttttgaccccttatcttctctaaaagttgcgattatgac 455201  T
Q  465 ccat 468  Q
    ||||    
T  455202 ccat 455205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 466
Target Start/End: Original strand, 455000 - 455107
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 458  Q
    |||||||||||||| ||||||||| |||||||||||||| | |  ||||||||| ||||||| | | |||||||| ||||||||  | |||||||  |||    
T  455000 caaaagtgaccccccatgtttagggaaatatgctcttttaaccccctaacataaaggaaatacgatcttttgaccccttatcttctctaaaagttttgat 455099  T
Q  459 tatgaccc 466  Q
    ||||||||    
T  455100 tatgaccc 455107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 348
Target Start/End: Complemental strand, 455331 - 455274
Alignment:
Q  291 gctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    |||||||| | |||||||  | |||| |||||||||||||||||||||||||||||||    
T  455331 gctaaactgcacttttcgaaccctaagtttcaaaatgttgcgattttggccccctatt 455274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 436418 - 436354
Alignment:
Q  284 tttttaggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctatt 348  Q
    ||||||||  ||||| | ||||| |||| |||||||||||||||||| |||||||| | ||||||    
T  436418 tttttaggtaaaactgcactttttgccccctaaatttcaaaatgttgtgattttggtcacctatt 436354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 288 - 414
Target Start/End: Original strand, 5288 - 5413
Alignment:
Q  288 taggctaaacttcccttttcgccctctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaa 387  Q
    ||||||||||| | ||| ||||||| ||  |||||||||||||| ||||||||||||||||        | |||||||||||||| ||||||||| ||||    
T  5288 taggctaaactacacttctcgccctttatgtttcaaaatgttgcaattttggccccctattaaaaaaa-tggcaaaagtgaccccttatgtttagaaaaa 5386  T
Q  388 tatgctcttttgagcttctaacataag 414  Q
    ||||||||||||| || ||||| ||||    
T  5387 tatgctcttttgacctcctaacgtaag 5413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 405 - 466
Target Start/End: Complemental strand, 3118 - 3056
Alignment:
Q  405 ctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  3118 ctaacataaggtaaatatgctattttgaccccttatttttacaaaaagttgcgattatgaccc 3056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 462
Target Start/End: Complemental strand, 250703 - 250650
Alignment:
Q  409 cataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  250703 cataagggaaatatgttttttgaccccttatctttacaaaaagttgtgattatg 250650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 462
Target Start/End: Original strand, 29789 - 29888
Alignment:
Q  361 aaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgatt 459  Q
    ||||||||||||  |||||| || ||||||||||||| || |  ||||||||||||||||||| | |||||||| ||||||||  ||||||||||| |||    
T  29789 aaaagtgacccc--atgtttggggaaatatgctctttggaccc-ctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcaatt 29885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 461
Target Start/End: Original strand, 9992 - 10092
Alignment:
Q  360 caaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgat 458  Q
    |||||||||||| | ||||||||| |||||||||||||||| |   |||||||||| ||||||| | ||| |||| ||||||||  ||||||||||||||    
T  9992 caaaagtgaccctc-atgtttagggaaatatgctcttttga-cccataacataaggaaaatatgatctttagaccccttatcttctcaaaaagttgcgat 10089  T
Q  459 tat 461  Q
    |||    
T  10090 tat 10092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 54492 - 54542
Alignment:
Q  413 agggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  54492 agggaaatatgctcttttggccccttatctttacaaaaagttgcgattatg 54542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 462
Target Start/End: Complemental strand, 44102 - 43956
Alignment:
Q  313 ctaaatttcaaaatgttgcgattttggccccctattnnnnnnnntagcaaaagtgaccccctatgtttaggaaaatatgctcttttgagcttctaacata 412  Q
    |||| |||||||||||||  ||||||||||||||||        | ||||||||| ||||  ||||||||||||||||||| |||||| |  |||||  |    
T  44102 ctaagtttcaaaatgttgtaattttggccccctattaaaaaaa-tggcaaaagtgccccc--atgtttaggaaaatatgcttttttga-cccctaacgaa 44007  T
Q  413 agggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    ||||||||||| | ||||||||| |||||||  ||||||||||||| ||||    
T  44006 agggaaatatgatcttttgaccttttatcttctcaaaaagttgcgactatg 43956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 462
Target Start/End: Original strand, 112214 - 112299
Alignment:
Q  378 tttaggaaaatatgctcttttgagcttctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatg 462  Q
    |||||| ||||||||  |||||| || ||||||||||||||||||| | |||||||  ||||||||  |||||||||||| |||||    
T  112214 tttagggaaatatgcctttttgacctcctaacataagggaaatatgatcttttgactccttatcttctcaaaaagttgcggttatg 112299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 466
Target Start/End: Original strand, 9168 - 9208
Alignment:
Q  426 ttttgacctcttatctttacaaaaagttgcgattatgaccc 466  Q
    ||||||||  |||||||| ||||||||||||||||||||||    
T  9168 ttttgacccattatcttttcaaaaagttgcgattatgaccc 9208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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