View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0845_high_10 (Length: 303)
Name: NF0845_high_10
Description: NF0845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0845_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 168; Significance: 5e-90; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 12103584 - 12103373
Alignment:
| Q |
1 |
gtcctttcatcttccatgtagctgctacaaggacttcctcatctccatctcgacagagtgcgcttaatccctaggagttcgcttcagacaggtttgcatc |
100 |
Q |
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| T |
12103584 |
gtcctttcatcttccatgtagccgctgcaatgacttccccatctccatctcgacagagtgcgcttaatccccaggagttcgcttcagacaggtttgcatc |
12103485 |
T |
|
| Q |
101 |
agtgttcattttgtacaaattattttctggtttcctccatcttgtctgaactgtatgctgagtttgctgattgtgcgtagaagtcgagttctgcatcatg |
200 |
Q |
| |
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|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | || ||||||||| |
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| T |
12103484 |
agtgttcattttgtacaaattattttatggtttcctccatcttgtcggaactgtatgctgagtttgctgattgtgcgtagaagtcaatttatgcatcatg |
12103385 |
T |
|
| Q |
201 |
ttgagtatgttg |
212 |
Q |
| |
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||| |||||||| |
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|
| T |
12103384 |
ttgggtatgttg |
12103373 |
T |
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