View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0845_high_12 (Length: 272)
Name: NF0845_high_12
Description: NF0845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0845_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 25 - 265
Target Start/End: Complemental strand, 32688124 - 32687884
Alignment:
| Q |
25 |
catcaactatccccaaacatatgcgatcagtgaaccaagacgatacagaaaagttgaaacttggcaatcttgctctcaaccagctccaacgtggagatgt |
124 |
Q |
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| T |
32688124 |
catcaactatccccaaacatatgcgatcagtgaaccaagacgatacagaaaagttgaaacttggcaatcttgctctcaaccagctccaacgtggaaatgt |
32688025 |
T |
|
| Q |
125 |
gcaattaagccgtcaatctaatacatccataaaatttactggaggtcaacaatattatgggttttaacccagtgtattagttcacgcaagtaatcatttt |
224 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32688024 |
gcaattaagccgtcaatctagtacatccataaaatttactggaggtcaacaatattatgggttttaacccagtgtattagttcacgcaagtaatcatttt |
32687925 |
T |
|
| Q |
225 |
tactaaaaagaagtatatgtaatctaatcagattttgttgg |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
32687924 |
tactaaaaagaagtatatgtaatctaatcagattttgttgg |
32687884 |
T |
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