View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0845_low_39 (Length: 284)

Name: NF0845_low_39
Description: NF0845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0845_low_39
NF0845_low_39
[»] chr4 (36 HSPs)
chr4 (135-236)||(26239858-26239949)
chr4 (1-54)||(4829884-4829937)
chr4 (1-54)||(4833179-4833232)
chr4 (1-54)||(14036005-14036058)
chr4 (1-54)||(33661329-33661383)
chr4 (1-54)||(15747282-15747335)
chr4 (1-52)||(16370463-16370515)
chr4 (1-52)||(18231012-18231064)
chr4 (3-54)||(21188699-21188751)
chr4 (3-54)||(4828424-4828475)
chr4 (1-55)||(27028999-27029054)
chr4 (1-54)||(2757607-2757661)
chr4 (1-54)||(15712435-15712489)
chr4 (1-54)||(18214046-18214100)
chr4 (1-54)||(24046205-24046259)
chr4 (1-54)||(15447122-15447175)
chr4 (1-54)||(288208-288261)
chr4 (1-54)||(9333276-9333330)
chr4 (1-54)||(9387059-9387113)
chr4 (1-54)||(13043518-13043572)
chr4 (1-54)||(13879039-13879093)
chr4 (1-54)||(13882646-13882700)
chr4 (1-54)||(14699819-14699873)
chr4 (1-54)||(28386501-28386555)
chr4 (1-49)||(15239558-15239607)
chr4 (1-49)||(15413628-15413677)
chr4 (1-49)||(15415630-15415679)
chr4 (2-54)||(55501695-55501747)
chr4 (1-52)||(13745856-13745907)
chr4 (3-54)||(41792789-41792841)
chr4 (1-47)||(28919938-28919985)
chr4 (1-51)||(53386644-53386695)
chr4 (1-54)||(10314809-10314863)
chr4 (1-54)||(13511242-13511296)
chr4 (1-54)||(28383941-28383995)
chr4 (1-45)||(32490996-32491041)
[»] chr7 (35 HSPs)
chr7 (1-54)||(34958834-34958887)
chr7 (1-54)||(831360-831413)
chr7 (1-54)||(1196540-1196593)
chr7 (3-54)||(13256959-13257010)
chr7 (1-54)||(11662378-11662432)
chr7 (1-54)||(16921915-16921969)
chr7 (1-54)||(148903-148957)
chr7 (1-54)||(10895504-10895558)
chr7 (1-54)||(16009864-16009918)
chr7 (1-54)||(17504703-17504757)
chr7 (1-54)||(17548457-17548511)
chr7 (1-54)||(18873636-18873690)
chr7 (1-54)||(21064174-21064228)
chr7 (1-54)||(35367337-35367391)
chr7 (1-54)||(46681063-46681117)
chr7 (1-52)||(7530392-7530444)
chr7 (5-52)||(15726605-15726653)
chr7 (1-54)||(14190627-14190682)
chr7 (1-51)||(16249963-16250014)
chr7 (1-54)||(123140-123193)
chr7 (1-54)||(13732488-13732541)
chr7 (1-54)||(14567502-14567556)
chr7 (1-50)||(15168470-15168520)
chr7 (1-54)||(16929008-16929062)
chr7 (7-52)||(23461334-23461380)
chr7 (1-54)||(48786431-48786484)
chr7 (2-54)||(13864087-13864139)
chr7 (1-52)||(14188040-14188093)
chr7 (1-52)||(16007547-16007598)
chr7 (1-52)||(16574511-16574563)
chr7 (1-52)||(16591099-16591151)
chr7 (4-54)||(41285291-41285342)
chr7 (1-54)||(14113612-14113666)
chr7 (1-54)||(14423263-14423317)
chr7 (1-48)||(13394422-13394470)
[»] chr2 (25 HSPs)
chr2 (4-54)||(41300656-41300706)
chr2 (1-54)||(44089949-44090002)
chr2 (1-54)||(21072414-21072468)
chr2 (1-54)||(22110796-22110850)
chr2 (1-54)||(23376179-23376233)
chr2 (1-54)||(12626860-12626914)
chr2 (1-54)||(19664791-19664845)
chr2 (1-54)||(24272759-24272813)
chr2 (1-54)||(28350424-28350478)
chr2 (4-54)||(37380766-37380817)
chr2 (1-50)||(6259893-6259943)
chr2 (1-50)||(19661166-19661216)
chr2 (1-54)||(19802617-19802671)
chr2 (1-54)||(24505818-24505871)
chr2 (1-54)||(31504712-31504766)
chr2 (1-54)||(31507278-31507332)
chr2 (1-54)||(31757037-31757090)
chr2 (1-54)||(41683711-41683764)
chr2 (1-48)||(10038798-10038846)
chr2 (3-54)||(21238057-21238109)
chr2 (3-54)||(21240607-21240659)
chr2 (1-52)||(23086650-23086702)
chr2 (1-52)||(44622048-44622099)
chr2 (1-50)||(9243241-9243291)
chr2 (1-49)||(25652477-25652526)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-54)||(147894-147947)
scaffold0021 (1-54)||(132920-132973)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-54)||(391604-391657)
[»] chr5 (26 HSPs)
chr5 (1-54)||(23110924-23110977)
chr5 (1-54)||(23540038-23540091)
chr5 (1-54)||(22751417-22751471)
chr5 (1-54)||(30344420-30344474)
chr5 (1-54)||(21662868-21662922)
chr5 (1-54)||(22341341-22341395)
chr5 (1-54)||(22881304-22881358)
chr5 (1-54)||(38144259-38144313)
chr5 (1-54)||(42961850-42961904)
chr5 (1-52)||(21979794-21979846)
chr5 (1-52)||(24276234-24276286)
chr5 (1-52)||(24385927-24385979)
chr5 (1-54)||(29324170-29324224)
chr5 (1-54)||(16254885-16254938)
chr5 (1-54)||(16258518-16258571)
chr5 (1-54)||(22337803-22337857)
chr5 (1-54)||(22588682-22588735)
chr5 (1-54)||(22592237-22592290)
chr5 (1-54)||(22595792-22595845)
chr5 (1-54)||(23694570-23694624)
chr5 (1-49)||(7796270-7796319)
chr5 (3-54)||(26497002-26497054)
chr5 (1-54)||(4398825-4398879)
chr5 (1-54)||(23669475-23669529)
chr5 (5-54)||(26360057-26360106)
chr5 (4-44)||(21553135-21553176)
[»] chr8 (22 HSPs)
chr8 (1-54)||(25657250-25657304)
chr8 (1-54)||(15002838-15002892)
chr8 (1-54)||(32951162-32951216)
chr8 (1-54)||(8727460-8727514)
chr8 (1-54)||(10833855-10833909)
chr8 (1-54)||(19883209-19883263)
chr8 (1-54)||(24706757-24706811)
chr8 (1-54)||(27940570-27940624)
chr8 (1-54)||(44433181-44433235)
chr8 (1-49)||(41993522-41993571)
chr8 (1-52)||(20387747-20387799)
chr8 (1-54)||(7300015-7300069)
chr8 (1-54)||(17616031-17616085)
chr8 (1-54)||(22058339-22058393)
chr8 (1-54)||(22144335-22144388)
chr8 (1-52)||(20494095-20494147)
chr8 (1-52)||(22433351-22433403)
chr8 (1-52)||(22815325-22815377)
chr8 (1-54)||(6607210-6607263)
chr8 (4-52)||(14420467-14420516)
chr8 (1-49)||(22617890-22617939)
chr8 (1-52)||(15634822-15634874)
[»] chr3 (32 HSPs)
chr3 (1-54)||(10952456-10952510)
chr3 (1-54)||(10833088-10833142)
chr3 (1-54)||(10953385-10953439)
chr3 (1-54)||(16801305-16801359)
chr3 (1-54)||(30205348-30205402)
chr3 (3-54)||(18893967-18894019)
chr3 (1-54)||(14762464-14762518)
chr3 (1-54)||(23370211-23370265)
chr3 (1-54)||(38310523-38310577)
chr3 (1-54)||(54042739-54042793)
chr3 (1-52)||(13837400-13837452)
chr3 (7-54)||(18898266-18898314)
chr3 (1-55)||(602588-602643)
chr3 (1-55)||(7633482-7633537)
chr3 (1-55)||(15009107-15009162)
chr3 (1-54)||(2037439-2037492)
chr3 (1-54)||(2041180-2041233)
chr3 (1-54)||(10988561-10988615)
chr3 (1-54)||(14039295-14039348)
chr3 (1-54)||(14042763-14042816)
chr3 (1-54)||(20247515-20247569)
chr3 (1-54)||(54974501-54974555)
chr3 (1-54)||(54977111-54977165)
chr3 (1-54)||(54979721-54979775)
chr3 (1-49)||(14646773-14646822)
chr3 (1-49)||(19444854-19444903)
chr3 (1-52)||(39231842-39231893)
chr3 (3-54)||(53225947-53225999)
chr3 (4-54)||(34851028-34851079)
chr3 (1-54)||(52337690-52337745)
chr3 (1-49)||(15239313-15239362)
chr3 (1-49)||(19451493-19451542)
[»] scaffold0132 (2 HSPs)
scaffold0132 (1-54)||(3414-3467)
scaffold0132 (1-54)||(11374-11427)
[»] scaffold0860 (1 HSPs)
scaffold0860 (1-54)||(4026-4080)
[»] scaffold0500 (1 HSPs)
scaffold0500 (1-54)||(10450-10504)
[»] scaffold0422 (1 HSPs)
scaffold0422 (1-54)||(4211-4265)
[»] scaffold0298 (1 HSPs)
scaffold0298 (1-54)||(875-929)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-54)||(15705-15759)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-54)||(33665-33719)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-54)||(221919-221973)
[»] chr6 (21 HSPs)
chr6 (1-54)||(13765608-13765662)
chr6 (1-54)||(23058221-23058275)
chr6 (1-54)||(23610719-23610773)
chr6 (3-54)||(29415282-29415333)
chr6 (1-54)||(2286491-2286545)
chr6 (1-54)||(4478158-4478212)
chr6 (1-54)||(21347082-21347136)
chr6 (1-54)||(23839476-23839530)
chr6 (5-52)||(1589508-1589556)
chr6 (4-54)||(15540393-15540444)
chr6 (1-54)||(8524048-8524101)
chr6 (1-54)||(12597077-12597131)
chr6 (1-54)||(21504995-21505048)
chr6 (1-54)||(25598914-25598968)
chr6 (1-54)||(29493870-29493923)
chr6 (1-52)||(1640230-1640282)
chr6 (1-52)||(16830913-16830965)
chr6 (1-33)||(29847062-29847094)
chr6 (1-54)||(16103460-16103514)
chr6 (11-54)||(10985833-10985877)
chr6 (3-54)||(22593399-22593451)
[»] chr1 (16 HSPs)
chr1 (1-54)||(18276246-18276300)
chr1 (1-54)||(21180016-21180070)
chr1 (1-54)||(28203494-28203548)
chr1 (1-54)||(28313611-28313665)
chr1 (1-52)||(20902396-20902448)
chr1 (1-55)||(24088533-24088588)
chr1 (1-54)||(16373241-16373295)
chr1 (1-54)||(18271592-18271646)
chr1 (2-54)||(22219723-22219776)
chr1 (1-54)||(20436750-20436804)
chr1 (1-54)||(20632434-20632487)
chr1 (1-54)||(20887629-20887682)
chr1 (1-54)||(22899203-22899256)
chr1 (1-54)||(36182694-36182747)
chr1 (1-52)||(22075483-22075534)
chr1 (1-52)||(45495105-45495156)
[»] scaffold0117 (1 HSPs)
scaffold0117 (2-54)||(22123-22176)
[»] scaffold0388 (1 HSPs)
scaffold0388 (1-52)||(14749-14801)
[»] scaffold0371 (1 HSPs)
scaffold0371 (1-52)||(8781-8833)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-52)||(2324-2376)
[»] scaffold0819 (1 HSPs)
scaffold0819 (1-54)||(155-209)
[»] scaffold0553 (1 HSPs)
scaffold0553 (1-54)||(9900-9954)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-54)||(1230-1284)
[»] scaffold0502 (1 HSPs)
scaffold0502 (1-54)||(12566-12620)
[»] scaffold0395 (1 HSPs)
scaffold0395 (1-54)||(7492-7546)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-54)||(8493-8547)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-54)||(23452-23506)
[»] scaffold0241 (1 HSPs)
scaffold0241 (1-54)||(15499-15553)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-54)||(7701-7755)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-54)||(33024-33078)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-54)||(10356-10410)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-54)||(10535-10589)
[»] scaffold0107 (1 HSPs)
scaffold0107 (1-54)||(4150-4204)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-54)||(29175-29229)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-54)||(106570-106624)
[»] scaffold0609 (1 HSPs)
scaffold0609 (1-49)||(897-946)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-49)||(189991-190040)
[»] scaffold1276 (1 HSPs)
scaffold1276 (1-52)||(1361-1413)
[»] scaffold0586 (1 HSPs)
scaffold0586 (3-54)||(5010-5062)
[»] scaffold0447 (2 HSPs)
scaffold0447 (1-52)||(12723-12775)
scaffold0447 (1-52)||(8109-8161)
[»] scaffold0064 (2 HSPs)
scaffold0064 (1-52)||(29423-29475)
scaffold0064 (1-52)||(41414-41466)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-47)||(1606-1653)
[»] scaffold0525 (1 HSPs)
scaffold0525 (1-54)||(7355-7408)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-50)||(15609-15659)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-54)||(1967-2021)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-54)||(47759-47812)
[»] scaffold0643 (1 HSPs)
scaffold0643 (1-54)||(8662-8715)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-49)||(31199-31248)
[»] scaffold0962 (1 HSPs)
scaffold0962 (1-48)||(347-395)
[»] scaffold0635 (1 HSPs)
scaffold0635 (1-48)||(8224-8272)
[»] scaffold0515 (1 HSPs)
scaffold0515 (1-52)||(7110-7162)
[»] scaffold0383 (1 HSPs)
scaffold0383 (1-52)||(10718-10770)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-52)||(7120-7172)
[»] scaffold0181 (1 HSPs)
scaffold0181 (1-52)||(25248-25300)
[»] scaffold0152 (1 HSPs)
scaffold0152 (1-52)||(24731-24783)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-52)||(163583-163635)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-52)||(34719-34771)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-47)||(181799-181846)
[»] scaffold0003 (1 HSPs)
scaffold0003 (2-52)||(253507-253557)
[»] scaffold1992 (1 HSPs)
scaffold1992 (1-54)||(105-158)
[»] scaffold0453 (1 HSPs)
scaffold0453 (1-54)||(6762-6816)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-49)||(4441-4490)
[»] scaffold0335 (1 HSPs)
scaffold0335 (1-52)||(2056-2108)


Alignment Details
Target: chr4 (Bit Score: 67; Significance: 8e-30; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 26239949 - 26239858
Alignment:
Q  135 tatagtataaagtagtggacaaatagagcaagacgtcttaagagggttggaggaggaggcgacaacagaacatcgttgcgccatgaaaatctattttttg 234  Q
    |||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26239949 tatagtataaagtagtggacaaatagagcaaga----------gggttggaggaggaggcgacaacagaacatcgttgcgccatgaaaatctattttttg 26239860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4829937 - 4829884
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  4829937 cacttattctattaaataatgaaaatagccattaataaaatacacgacaccaca 4829884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4833232 - 4833179
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  4833232 cacttattctattaaataatgaaaatagccattaataaaatacacgacaccaca 4833179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14036005 - 14036058
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  14036005 cacttattctattaaataatgaaaatagccattaataaaatacacaacaccaca 14036058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33661383 - 33661329
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  33661383 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 33661329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15747335 - 15747282
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||||||||||    
T  15747335 cacttattctattaaataatgaaaataaccattaatgaaatacaccacaccaca 15747282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16370515 - 16370463
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  16370515 cacttattctattaaataataaaaatagtcatttaataaaatacaccacacca 16370463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 18231012 - 18231064
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  18231012 cacttattctattaaataataaaaatagtcatttaataaaatacaccacacca 18231064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 21188751 - 21188699
Alignment:
Q  3 cttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  21188751 cttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 21188699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 4828475 - 4828424
Alignment:
Q  3 cttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| |||||    
T  4828475 cttattctattaaataatgaaaatagccattaataaaatacatcaccccaca 4828424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27028999 - 27029054
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccacag 55  Q
    |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  27028999 cacttattctattaaataataaaaatagtcatttaataaaatataccacaccacag 27029054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2757607 - 2757661
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  2757607 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 2757661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15712489 - 15712435
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | |||||||||| |||||||||||||||||||||||    
T  15712489 cacttattctattaaatactaaaaatagtcatttaataaaatacaccacaccaca 15712435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18214046 - 18214100
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  18214046 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 18214100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24046259 - 24046205
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  24046259 cacttattctattaaataataaaaatagccatttaataaaatacaccacaccaca 24046205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15447175 - 15447122
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  |||| | ||||||||||||||||||    
T  15447175 cacttattctattaaataatgaaaataaccatttaaaaaatacaccacaccaca 15447122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 288208 - 288261
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  288208 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 288261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9333330 - 9333276
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  9333330 cacttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 9333276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9387113 - 9387059
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  9387113 cacttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 9387059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13043572 - 13043518
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    ||||||||| |||||||||| ||||||| |||| |||||||||||||||||||||    
T  13043572 cacttattccattaaataataaaaatagccatttaataaaatacaccacaccaca 13043518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13879039 - 13879093
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| ||||||  || |||||||||||||||||||||||    
T  13879039 cacttattctattaaataataaaaataaccatttaataaaatacaccacaccaca 13879093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13882646 - 13882700
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||| ||||||||||||||| ||||||| |||| |||||||||||||||||||||    
T  13882646 cactcattctattaaataataaaaatagccatttaataaaatacaccacaccaca 13882700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14699819 - 14699873
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  14699819 cacttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 14699873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28386501 - 28386555
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  28386501 cacttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 28386555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15239607 - 15239558
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccaca 49  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||||    
T  15239607 cacttattctattaaatagtaaaaatagtcatttaataaaatacaccaca 15239558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15413677 - 15413628
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccaca 49  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| ||||    
T  15413677 cacttattctattaaataataaaaatagtcatttaataaaatacatcaca 15413628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15415679 - 15415630
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccaca 49  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| ||||    
T  15415679 cacttattctattaaataataaaaatagtcatttaataaaatacatcaca 15415630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 55501747 - 55501695
Alignment:
Q  2 acttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  55501747 acttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 55501695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13745856 - 13745907
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  13745856 cacttattctattaaataat-aaaatagtcatttaataaaatataccacacca 13745907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 41792789 - 41792841
Alignment:
Q  3 cttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  41792789 cttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 41792841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28919938 - 28919985
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacacca 47  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  28919938 cacttattctattaaataataaaaataatcatttaataaaatacacca 28919985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 53386695 - 53386644
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacc 51  Q
    |||||||||||||||||| | ||||||| || ||||||||||||||||||||    
T  53386695 cacttattctattaaatactaaaaatagccatttaataaaatacaccacacc 53386644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10314809 - 10314863
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | ||||||| || ||||||||||||| |||||||||    
T  10314809 cacttattctattaaatactaaaaatagccatttaataaaatacatcacaccaca 10314863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13511296 - 13511242
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || ||||||||||| | |||||||||    
T  13511296 cacttattctattaaataatgaaaataaccatttaataaaatatatcacaccaca 13511242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28383941 - 28383995
Alignment:
Q  1 cacttattctattaaataatgaaaatagt-cattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||| | | ||||||||||| |||||||||||    
T  28383941 cacttattctattaaataataaaaataatcctttaataaaatataccacaccaca 28383995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32490996 - 32491041
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacac 45  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||    
T  32490996 cacttattctattaaataataaaaatagccatttaataaaatacac 32491041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34958834 - 34958887
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34958834 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 34958887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 831413 - 831360
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  831413 cacttattctattaaataatgaaaatagccattaataaaatacaccacaccaca 831360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1196593 - 1196540
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1196593 cacttattctattaaataatgaaaatagccattaataaaatacaccacaccaca 1196540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 13256959 - 13257010
Alignment:
Q  3 cttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  13256959 cttattctattaaataatgaaaatagccaataataaaatacaccacaccaca 13257010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11662378 - 11662432
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  11662378 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 11662432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16921969 - 16921915
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  16921969 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 16921915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 148903 - 148957
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  148903 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 148957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10895558 - 10895504
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  10895558 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 10895504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16009864 - 16009918
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  16009864 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 16009918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17504757 - 17504703
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| |||||||||    
T  17504757 cacttattctattaaataataaaaatagtcatttaataaaatacatcacaccaca 17504703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17548457 - 17548511
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| |||||||||    
T  17548457 cacttattctattaaataataaaaatagtcatttaataaaatacatcacaccaca 17548511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18873636 - 18873690
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  18873636 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 18873690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21064228 - 21064174
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  21064228 cacttattctattaaataataaaaatagccatttaataaaatacaccacaccaca 21064174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35367337 - 35367391
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  35367337 cacttattctattaaataataaaaatagccatttaataaaatacaccacaccaca 35367391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 46681117 - 46681063
Alignment:
Q  1 cacttattctattaaataatgaaaatagt-cattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  46681117 cacttattctattaaataataaaaatagtcctttaataaaatacaccacaccaca 46681063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7530392 - 7530444
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||||||||    
T  7530392 cacttattctattaaataataaaaatagttatttaataaaatacaccacacca 7530444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 15726605 - 15726653
Alignment:
Q  5 tattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  15726605 tattctattaaataataaaaatagtcatttaataaaatacaccacacca 15726653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14190682 - 14190627
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaat-aaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  14190682 cacttattctattaaataatgaaaatagccatttaataaaaatacaccacaccaca 14190627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16250014 - 16249963
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacc 51  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| ||||||    
T  16250014 cacttattctattaaataatgaaaattgtcatttaataaaatacatcacacc 16249963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 123193 - 123140
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  123193 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 123140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13732541 - 13732488
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  13732541 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 13732488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14567502 - 14567556
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || ||||||||||||| |||||||||    
T  14567502 cacttattctattaaataatgaaaataaccatttaataaaatacaacacaccaca 14567556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15168470 - 15168520
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacac 50  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||    
T  15168470 cacttattctattaaataatgaaaataaccatttaataaaatacaccacac 15168520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16929062 - 16929008
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| ||||| | |||| |||||||||||||||||||||    
T  16929062 cacttattctattaaataataaaaatggccatttaataaaatacaccacaccaca 16929008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 23461380 - 23461334
Alignment:
Q  7 ttctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||    
T  23461380 ttctattaaataataaaaatagtcatttaataaaatacaccacacca 23461334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48786431 - 48786484
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  48786431 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 48786484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 13864139 - 13864087
Alignment:
Q  2 acttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    ||||||||||||||||||| |||||| ||||| |||||||||||||||||||||    
T  13864139 acttattctattaaataat-aaaataatcatttaataaaatacaccacaccaca 13864087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14188093 - 14188040
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaat-aaaatacaccacacca 52  Q
    |||||||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  14188093 cacttattctattaaataatgaaaatagccatttaataaaaatacaccacacca 14188040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16007547 - 16007598
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  16007547 cacttattctattaaataat-aaaatagtcatttaataaaatataccacacca 16007598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16574511 - 16574563
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| ||| ||| || |||||||||||||||||||||    
T  16574511 cacttattctattaaataataaaagtagccatttaataaaatacaccacacca 16574563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16591151 - 16591099
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacacca 52  Q
    |||||||||||||||||||| ||| ||| |||| |||||||||||||||||||    
T  16591151 cacttattctattaaataataaaagtagccatttaataaaatacaccacacca 16591099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 41285291 - 41285342
Alignment:
Q  4 ttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||| |||||||| | |||||||||||| |||||||||||||||||||||    
T  41285291 ttattccattaaatactaaaaatagtcatttaataaaatacaccacaccaca 41285342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14113612 - 14113666
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||| ||||||||||| ||||||  |||| |||||||||||||||||||||    
T  14113612 cacttattttattaaataataaaaataaccatttaataaaatacaccacaccaca 14113666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14423263 - 14423317
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||| ||||||||||| ||||||  |||| |||||||||||||||||||||    
T  14423263 cacttattttattaaataataaaaataaccatttaataaaatacaccacaccaca 14423317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13394470 - 13394422
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccac 48  Q
    |||||||||||||||||| | ||||||| || |||||||||||||||||    
T  13394470 cacttattctattaaatactaaaaatagccatttaataaaatacaccac 13394422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 41300706 - 41300656
Alignment:
Q  4 ttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41300706 ttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 41300656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44090002 - 44089949
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  44090002 cacttattctattaaataatgaaaatagccattaataaaatagaccacaccaca 44089949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21072468 - 21072414
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  21072468 cacttattctattaaataatgaaaataatcatttaataaaatacaccacaccaca 21072414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22110796 - 22110850
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  22110796 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 22110850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23376179 - 23376233
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  23376179 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 23376233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12626914 - 12626860
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  12626914 cacttattctattaaataataaaaatagtcatttaataaaatataccacaccaca 12626860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19664845 - 19664791
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  19664845 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 19664791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24272813 - 24272759
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  24272813 cacttattctattaaataataaaaatagccatttaataaaatacaccacaccaca 24272759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28350424 - 28350478
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  28350424 cacttattctattaaataataaaaatagccatttaataaaatacaccacaccaca 28350478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 37380766 - 37380817
Alignment:
Q  4 ttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    ||||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  37380766 ttattctattaaatactaaaaatagtcatttaataaaatacaccacaccaca 37380817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6259943 - 6259893
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacac 50  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||    
T  6259943 cacttattctattaaataatgaaaataaccatttaataaaatacaccacac 6259893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19661216 - 19661166
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacac 50  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||    
T  19661216 cacttattctattaaataatgaaaataaccatttaataaaatacaccacac 19661166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19802617 - 19802671
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||    
T  19802617 cacttattctattaaataataaaaatagtcatttaataaaaaacactacaccaca 19802671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24505818 - 24505871
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  24505818 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 24505871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31504712 - 31504766
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  31504712 cacttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 31504766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31507278 - 31507332
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  31507278 cacttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 31507332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31757037 - 31757090
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  31757037 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 31757090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41683764 - 41683711
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  41683764 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 41683711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10038846 - 10038798
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccac 48  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  10038846 cacttattctattaaataatacaaatagtcatttaataaaatacaccac 10038798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 21238109 - 21238057
Alignment:
Q  3 cttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  21238109 cttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 21238057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 21240659 - 21240607
Alignment:
Q  3 cttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  21240659 cttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 21240607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23086650 - 23086702
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||| ||||    
T  23086650 cacttattctattaaattataaaaatagtcatttaataaaatacaccatacca 23086702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 44622048 - 44622099
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  44622048 cacttattctattaaataat-aaaatagtcatttaataaaatataccacacca 44622099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9243241 - 9243291
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacac 50  Q
    |||||||||||||||||||||||||||  || |||||||||||||| ||||    
T  9243241 cacttattctattaaataatgaaaataaccatttaataaaatacactacac 9243291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25652477 - 25652526
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccaca 49  Q
    |||||||||||||||||||| ||||||  || ||||||||||||||||||    
T  25652477 cacttattctattaaataataaaaataaccatttaataaaatacaccaca 25652526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 147894 - 147947
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  147894 cacttattctattaaataatgaaaatagccattaataaaatacaccacaccaca 147947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 132973 - 132920
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  132973 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 132920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 391604 - 391657
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  391604 cacttattctattaaataatgaaaatagccattaataaaatacaccacaccaca 391657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23110977 - 23110924
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23110977 cacttattctattaaataatgaaaatagccattaataaaatacaccacaccaca 23110924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23540038 - 23540091
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  23540038 cacttattctattaaataatgaaaatagccattaataaaatacactacaccaca 23540091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22751417 - 22751471
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  22751417 cacttattctattaaataatgaaaataatcatttaataaaatacaccacaccaca 22751471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30344474 - 30344420
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  30344474 cacttattctattaaataatgaaaatagccatttaataaaatacaccacaccaca 30344420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21662922 - 21662868
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  21662922 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 21662868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22341341 - 22341395
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  22341341 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 22341395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22881304 - 22881358
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  22881304 cacttattctattaaataataaaaatagtcatttaataaaatataccacaccaca 22881358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38144313 - 38144259
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  38144313 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 38144259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42961850 - 42961904
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  42961850 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 42961904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 21979846 - 21979794
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||||    
T  21979846 cacttattctattaaataataaaaataatcatttaataaaatacaccacacca 21979794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24276286 - 24276234
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||||||||||    
T  24276286 cacttaatctattaaataataaaaatagtcatttaataaaatacaccacacca 24276234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24385927 - 24385979
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||||||||||    
T  24385927 cacttaatctattaaataataaaaatagtcatttaataaaatacaccacacca 24385979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29324224 - 29324170
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt--aataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  29324224 cacttattctattaaataat-aaaatagtcattttaataaaatacaccacaccaca 29324170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16254938 - 16254885
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  16254938 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 16254885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16258571 - 16258518
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  16258571 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 16258518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22337803 - 22337857
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || ||||||||||||| |||||||||    
T  22337803 cacttattctattaaataatgaaaataaccatttaataaaatacatcacaccaca 22337857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22588735 - 22588682
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  22588735 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 22588682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22592290 - 22592237
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  22592290 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 22592237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22595845 - 22595792
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  22595845 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 22595792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23694570 - 23694624
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||| |||||    
T  23694570 cacttattctattaaatactaaaaatagtcatttaataaaatacaccacgccaca 23694624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7796270 - 7796319
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccaca 49  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  7796270 cacttattctattaaataataaaaataatcatttaataaaatacaccaca 7796319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 26497002 - 26497054
Alignment:
Q  3 cttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  26497002 cttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 26497054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4398825 - 4398879
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||  |||| |||||||||||    
T  4398825 cacttattctattaaataataaaaatagtcatttaatttaatataccacaccaca 4398879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23669475 - 23669529
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | ||||||| || ||||||||||||||||| |||||    
T  23669475 cacttattctattaaatactaaaaatagccatttaataaaatacaccacgccaca 23669529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 26360106 - 26360057
Alignment:
Q  5 tattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  26360106 tattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 26360057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 21553176 - 21553135
Alignment:
Q  4 ttattctattaaataatgaaaatagtca-ttaataaaataca 44  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  21553176 ttattctattaaataataaaaatagtcatttaataaaataca 21553135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 7e-18; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25657304 - 25657250
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25657304 cacttattctattaaataatgaaaatagtcatttaataaaatacaccacaccaca 25657250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15002892 - 15002838
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  15002892 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 15002838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32951162 - 32951216
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  32951162 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 32951216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8727514 - 8727460
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  8727514 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 8727460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10833909 - 10833855
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  10833909 cacttattctattaaataataaaaatagtcatttaataaaatataccacaccaca 10833855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19883209 - 19883263
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  19883209 cacttattctattaaataatgaaaatagccatttaataaaatacactacaccaca 19883263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24706811 - 24706757
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  24706811 cacttattctattaaataataaaaatagtcatttaataaaatataccacaccaca 24706757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27940624 - 27940570
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  27940624 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 27940570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44433181 - 44433235
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  44433181 cacttattctattaaataataaaaatagccatttaataaaatacaccacaccaca 44433235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41993571 - 41993522
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccaca 49  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  41993571 cacttattctattaaataataaaaatagtcatttaataaaatacaccaca 41993522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 20387747 - 20387799
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||||    
T  20387747 cacttattctattaaataataaaaataatcatttaataaaatacaccacacca 20387799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7300069 - 7300015
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  7300069 cacttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 7300015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17616031 - 17616085
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  17616031 cacttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 17616085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22058393 - 22058339
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||    
T  22058393 cacttattctattaaataataaaaataatcatttaataaaatataccacaccaca 22058339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22144388 - 22144335
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  22144388 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 22144335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 20494147 - 20494095
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||| ||||||    
T  20494147 cacttattctattaaataatacaaatagtcatttaataaaatacactacacca 20494095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22433403 - 22433351
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||| |||||||    
T  22433403 cacttattttattaaataataaaaatagtcatttaataaaatacatcacacca 22433351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22815377 - 22815325
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||| |||||||    
T  22815377 cacttaatctattaaataataaaaatagtcatttaataaaatacaacacacca 22815325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6607263 - 6607210
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||| ||||| |||||||||||    
T  6607263 cacttattctattaaataat-aaaatagtcatttaatgaaatataccacaccaca 6607210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 14420467 - 14420516
Alignment:
Q  4 ttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    ||||||||||||||||| |||||| ||| ||||||||||| |||||||||    
T  14420467 ttattctattaaataataaaaataatcatttaataaaatataccacacca 14420516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22617890 - 22617939
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccaca 49  Q
    |||||||| ||||||||||| ||||||| || ||||||||||||||||||    
T  22617890 cacttattatattaaataataaaaatagccatttaataaaatacaccaca 22617939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15634874 - 15634822
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacacca 52  Q
    |||||||||||||||||||| ||| ||  |||| |||||||||||||||||||    
T  15634874 cacttattctattaaataataaaagtaaccatttaataaaatacaccacacca 15634822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10952510 - 10952456
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10952510 cacttattctattaaataatgaaaatagtcatttaataaaatacaccacaccaca 10952456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10833142 - 10833088
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  10833142 cacttattctattaaataatgaaaatagccatttaataaaatacaccacaccaca 10833088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10953439 - 10953385
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  10953439 cacttattctattaaataatgaaaatagccatttaataaaatacaccacaccaca 10953385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16801305 - 16801359
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  16801305 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 16801359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30205402 - 30205348
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  30205402 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 30205348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 18893967 - 18894019
Alignment:
Q  3 cttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  18893967 cttattctattaaataatgaaaatagccatttaataaaatacaccacaccaca 18894019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14762518 - 14762464
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  14762518 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 14762464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23370265 - 23370211
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  23370265 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 23370211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38310577 - 38310523
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  38310577 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 38310523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 54042739 - 54042793
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  54042739 cacttattctattaaataataaaaatagtcatttaataaaatataccacaccaca 54042793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13837400 - 13837452
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||||    
T  13837400 cacttattctattaaataataaaaataatcatttaataaaatacaccacacca 13837452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 18898266 - 18898314
Alignment:
Q  7 ttctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||    
T  18898266 ttctattaaataatgaaaatagccatttaataaaatacaccacaccaca 18898314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 602643 - 602588
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccacag 55  Q
    |||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||    
T  602643 cacttattctattaaataataaaaatagtcatttaataaaatataccacacaacag 602588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7633482 - 7633537
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccacag 55  Q
    |||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||    
T  7633482 cacttattctattaaataataaaaatagtcatttaataaaatataccacactacag 7633537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15009162 - 15009107
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccacag 55  Q
    ||||||||||||||| |||| |||||||||| ||||||||||| ||||||||||||    
T  15009162 cacttattctattaattaataaaaatagtcatttaataaaatataccacaccacag 15009107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2037492 - 2037439
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  2037492 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 2037439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2041233 - 2041180
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  2041233 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 2041180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10988615 - 10988561
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| ||||||| || |||||||| ||||||||||||||    
T  10988615 cacttattctattaaataataaaaatagccatttaataaactacaccacaccaca 10988561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14039295 - 14039348
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  14039295 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 14039348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14042763 - 14042816
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  14042763 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 14042816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20247569 - 20247515
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||   | |||||||||||||||||||||||    
T  20247569 cacttattctattaaataatgaaaataacaatttaataaaatacaccacaccaca 20247515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 54974501 - 54974555
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  54974501 cacttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 54974555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 54977111 - 54977165
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  54977111 cacttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 54977165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 54979721 - 54979775
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  54979721 cacttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 54979775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14646822 - 14646773
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccaca 49  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  14646822 cacttattctattaaataatacaaatagtcatttaataaaatacaccaca 14646773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19444854 - 19444903
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccaca 49  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  19444854 cacttattctattaaataatacaaatagtcatttaataaaatacaccaca 19444903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39231842 - 39231893
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  39231842 cacttattctattaaataat-aaaatagtcatttaataaaatataccacacca 39231893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 53225947 - 53225999
Alignment:
Q  3 cttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||| | ||||||| |||| |||||||||||||||||||||    
T  53225947 cttattctattaaatactaaaaatagccatttaataaaatacaccacaccaca 53225999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 34851079 - 34851028
Alignment:
Q  4 ttattctattaaataatgaaaatag-tcattaataaaatacaccacaccaca 54  Q
    ||||||||||||||||| ||||||  ||||||||||||||||| ||||||||    
T  34851079 ttattctattaaataataaaaataaatcattaataaaatacactacaccaca 34851028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 52337745 - 52337690
Alignment:
Q  1 cacttattctattaaataatgaaaa-tagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||||||||    
T  52337745 cacttattctattaaataataaaaaatagccatttaataaaatacaccacaccaca 52337690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15239313 - 15239362
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccaca 49  Q
    |||||||||||||||||||| ||||||  || ||||||||||||||||||    
T  15239313 cacttattctattaaataataaaaataaccatttaataaaatacaccaca 15239362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19451493 - 19451542
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccaca 49  Q
    ||||||||||||||||||||  |||||| || ||||||||||||||||||    
T  19451493 cacttattctattaaataatacaaatagacatttaataaaatacaccaca 19451542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3467 - 3414
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  3467 cacttattctattaaataatgaaaatagccattaataaaatacaccgcaccaca 3414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11427 - 11374
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  11427 cacttattctattaaataatgaaaatagccattaataaaatacaccgcaccaca 11374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0860 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0860
Description:

Target: scaffold0860; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4026 - 4080
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  4026 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 4080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10504 - 10450
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  10504 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 10450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4211 - 4265
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  4211 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 4265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 875 - 929
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  875 cacttattctattaaataatgaaaatagccatttaataaaatacaccacaccaca 929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15759 - 15705
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  15759 cacttattctattaaataatgaaaatagccatttaataaaatacaccacaccaca 15705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33719 - 33665
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  33719 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 33665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 221973 - 221919
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  221973 cacttattctattaaataatgaaaatagccatttaataaaatacaccacaccaca 221919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13765608 - 13765662
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  13765608 cacttattctattaaatgatgaaaatagtcatttaataaaatacaccacaccaca 13765662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23058221 - 23058275
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  23058221 cacttattctattaaataatgaaaataatcatttaataaaatacaccacaccaca 23058275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23610773 - 23610719
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  23610773 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 23610719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 29415333 - 29415282
Alignment:
Q  3 cttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    ||||||||||| |||||||||||||| ||||||||||||||| |||||||||    
T  29415333 cttattctatttaataatgaaaatagccattaataaaatacatcacaccaca 29415282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2286545 - 2286491
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  2286545 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 2286491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4478158 - 4478212
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  4478158 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 4478212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21347082 - 21347136
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  21347082 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 21347136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23839476 - 23839530
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  23839476 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 23839530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 1589556 - 1589508
Alignment:
Q  5 tattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  1589556 tattctattaaataataaaaatagtcatttaataaaatacaccacacca 1589508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 15540393 - 15540444
Alignment:
Q  4 ttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||    
T  15540393 ttattctattaaataataaaaatagtcatttaataaaatacatcacaccaca 15540444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8524048 - 8524101
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  8524048 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 8524101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12597077 - 12597131
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||    
T  12597077 cacttattctattaaataataaaaataatcatttaataaaatataccacaccaca 12597131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21504995 - 21505048
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  21504995 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 21505048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25598914 - 25598968
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || ||||||||||||| |||||||||    
T  25598914 cacttattctattaaataatgaaaataaccatttaataaaatacaacacaccaca 25598968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29493870 - 29493923
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  29493870 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 29493923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1640230 - 1640282
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||| |||||||    
T  1640230 cacttaatctattaaataataaaaatagtcatttaataaaatacaacacacca 1640282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16830913 - 16830965
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||||||| ||||||||||| || ||||||    
T  16830913 cacttattctattaaataataaaaatagtcatttaataaaatatactacacca 16830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29847094 - 29847062
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt 33  Q
    |||||||||||||||||||||||||||||||||    
T  29847094 cacttattctattaaataatgaaaatagtcatt 29847062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16103460 - 16103514
Alignment:
Q  1 cacttattctattaaataatgaaaatagt-cattaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||| | | ||||||||||| |||||||||||    
T  16103460 cacttattctattaaataataaaaataatcctttaataaaatataccacaccaca 16103514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 10985877 - 10985833
Alignment:
Q  11 attaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||||  |||| |||||||||||||||||||||    
T  10985877 attaaataatgaaaataaccatttaataaaatacaccacaccaca 10985833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 22593399 - 22593451
Alignment:
Q  3 cttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||| | ||||||| || ||||||||||| |||||||||||    
T  22593399 cttattctattaaatactaaaaatagccatttaataaaatataccacaccaca 22593451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18276246 - 18276300
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  18276246 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 18276300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21180070 - 21180016
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  21180070 cacttattctattaaataatgaaaatagccatttaataaaatacaccacaccaca 21180016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28203548 - 28203494
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  28203548 cacttattctattaaataataaaaatagtcatttaataaaatacaccacaccaca 28203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28313611 - 28313665
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  28313611 cacttattctattaaataatgaaaatagccatttaataaaatacaccacaccaca 28313665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 20902396 - 20902448
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  20902396 cacttattctattaaataataaaaatagtcatttaataaaatacaccacacca 20902448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24088533 - 24088588
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccacag 55  Q
    |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  24088533 cacttattctattaaataataaaaatagtcatttaataaaatataccacaccacag 24088588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16373241 - 16373295
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  16373241 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 16373295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18271592 - 18271646
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||||||    
T  18271592 cacttattctattaaataataaaaatattcatttaataaaatacaccacaccaca 18271646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 22219723 - 22219776
Alignment:
Q  2 acttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  22219723 acttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 22219776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20436804 - 20436750
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||| ||||||||||||||  |||| |||||||||||||||||||||    
T  20436804 cacttattctataaaataatgaaaataaccatttaataaaatacaccacaccaca 20436750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20632434 - 20632487
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  20632434 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 20632487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20887682 - 20887629
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  20887682 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 20887629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22899256 - 22899203
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  22899256 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 22899203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36182694 - 36182747
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  36182694 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 36182747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22075483 - 22075534
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  22075483 cacttattctattaaataat-aaaatagtcatttaataaaatataccacacca 22075534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 45495156 - 45495105
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||||| | ||||||||||| |||||||||    
T  45495156 cacttattctattaaataat-aaaatagtaatttaataaaatataccacacca 45495105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 22123 - 22176
Alignment:
Q  2 acttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  22123 acttattctattaaataatgaaaatagccatttaataaaatacaccacaccaca 22176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14801 - 14749
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  14801 cacttattctattaaataataaaaatagtcatttaataaaatacaccacacca 14749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8781 - 8833
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  8781 cacttattctattaaataataaaaatagtcatttaataaaatacaccacacca 8833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 2324 - 2376
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  2324 cacttattctattaaataataaaaatagtcatttaataaaatacaccacacca 2376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 155 - 209
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  155 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9954 - 9900
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  9954 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 9900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1284 - 1230
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  1284 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 1230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12620 - 12566
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  12620 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 12566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7546 - 7492
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  7546 cacttattctattaaataataaaaatagtcatttaataaaatataccacaccaca 7492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8547 - 8493
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  8547 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 8493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23506 - 23452
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  23506 cacttattctattaaataataaaaatagccatttaataaaatacaccacaccaca 23452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15553 - 15499
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  15553 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 15499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7701 - 7755
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  7701 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 7755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33024 - 33078
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  33024 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 33078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10356 - 10410
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  10356 cacttattctattaaataataaaaatagccatttaataaaatacaccacaccaca 10410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10535 - 10589
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  10535 cacttattctattaaataatgaaaataaccatttaataaaatacaccacaccaca 10589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4150 - 4204
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  4150 cacttattctattaaataataaaaatagccatttaataaaatacaccacaccaca 4204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29175 - 29229
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  29175 cacttattctattaaataataaaaatagccatttaataaaatacaccacaccaca 29229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 106570 - 106624
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  106570 cacttattctattaaatactaaaaatagtcattcaataaaatacaccacaccaca 106624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 897 - 946
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccaca 49  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  897 cacttattctattaaataataaaaatagtcatttaataaaatacaccaca 946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 189991 - 190040
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccaca 49  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  189991 cacttattctattaaataataaaaatagtcatttaataaaatacaccaca 190040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1361 - 1413
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||||    
T  1361 cacttattctattaaataataaaaataatcatttaataaaatacaccacacca 1413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 5010 - 5062
Alignment:
Q  3 cttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  5010 cttattctattaaataataaaaatagccatttaataaaatacaccacaccaca 5062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12723 - 12775
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  12723 cacttattctattaaataatacaaatagtcatttaataaaatacaccacacca 12775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8109 - 8161
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    ||||||||||||||||||||  ||||||||| |||||| ||||||||||||||    
T  8109 cacttattctattaaataatacaaatagtcatttaatacaatacaccacacca 8161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29475 - 29423
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  29475 cacttattttattaaataataaaaatagtcatttaataaaatacaccacacca 29423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41466 - 41414
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  41466 cacttattttattaaataataaaaatagtcatttaataaaatacaccacacca 41414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1653 - 1606
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacacca 47  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||    
T  1653 cacttattctattaaataataaaaatagtcatttaataaaatacacca 1606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7408 - 7355
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  7408 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 7355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15659 - 15609
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacac 50  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||    
T  15659 cacttattctattaaataatgaaaataaccatttaataaaatacaccacac 15609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2021 - 1967
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||||||||||  || ||||||||||| |||||||||||    
T  2021 cacttattctattaaataatgaaaataaccatttaataaaatataccacaccaca 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47759 - 47812
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  47759 cacttattctattaaataat-aaaatagtcatttaataaaatataccacaccaca 47812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0643 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8715 - 8662
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcattaataaaatacaccacaccaca 54  Q
    ||||||||| |||||||||||||||||    |||||||||||||||||||||||    
T  8715 cacttattccattaaataatgaaaataccatttaataaaatacaccacaccaca 8662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31248 - 31199
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccaca 49  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||||||||    
T  31248 cacttattctattacataataaaaatagtcatttaataaaatacaccaca 31199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 395 - 347
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcat-taataaaatacaccac 48  Q
    |||||||||||||||||||| |||||| |||| ||||||||||||||||    
T  395 cacttattctattaaataataaaaataatcatctaataaaatacaccac 347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8224 - 8272
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccac 48  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  8224 cacttattctattaaataatacaaatagtcatttaataaaatacaccac 8272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7110 - 7162
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    ||||||| ||||||||||||  ||||||||| |||||||||||||||||||||    
T  7110 cacttatactattaaataatataaatagtcatttaataaaatacaccacacca 7162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10718 - 10770
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    ||||||||||||||||||||  ||||||||| |||||| ||||||||||||||    
T  10718 cacttattctattaaataatacaaatagtcatttaatacaatacaccacacca 10770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7120 - 7172
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    ||||||| ||||||||||||  ||||||||| |||||||||||||||||||||    
T  7120 cacttatactattaaataatataaatagtcatttaataaaatacaccacacca 7172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25300 - 25248
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||| ||| ||||| |||||||||||||||    
T  25300 cacttattctattaaataataaaaataatcatttaatcaaatacaccacacca 25248  T

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Target: scaffold0152 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24731 - 24783
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    ||||||| ||||||||||||  ||||||||| |||||||||||||||||||||    
T  24731 cacttatactattaaataatacaaatagtcatttaataaaatacaccacacca 24783  T

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Target: scaffold0023 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 163583 - 163635
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||| |||||||||| ||||||||||| | |||||||    
T  163583 cacttattctattaaataataaaaatagtcatttaataaaatagatcacacca 163635  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 34719 - 34771
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    |||||||||||||||||||||||||||  || ||||||||||||||| |||||    
T  34719 cacttattctattaaataatgaaaataaccatttaataaaatacacctcacca 34771  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 181846 - 181799
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacacca 47  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  181846 cacttattctattaaataatagaaatagtcatttaataaaatacacca 181799  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 253557 - 253507
Alignment:
Q  2 acttattctattaaataatgaaaatagtca-ttaataaaatacaccacacca 52  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  253557 acttattctattaaataat-aaaatagtcatttaataaaatataccacacca 253507  T

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Target: scaffold1992 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1992
Description:

Target: scaffold1992; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 105 - 158
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    ||||||||||||||||||||| |||||  || |||||||||||||||||||||||    
T  105 cacttattctattaaataatg-aaataaccatttaataaaatacaccacaccaca 158  T

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Target: scaffold0453 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6816 - 6762
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccacaccaca 54  Q
    |||||||||||||||||| | |||||| ||| || ||||||||||||||||||||    
T  6816 cacttattctattaaatactaaaaatattcattttataaaatacaccacaccaca 6762  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4490 - 4441
Alignment:
Q  1 cacttattctattaaataatgaaaatagtca-ttaataaaatacaccaca 49  Q
    |||||||||||||||||| | |||||||| | ||||||||||||||||||    
T  4490 cacttattctattaaatagtaaaaatagttatttaataaaatacaccaca 4441  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 2056 - 2108
Alignment:
Q  1 cacttattctattaaataatgaaaatagtcatt-aataaaatacaccacacca 52  Q
    |||||||||||||||||||| ||| ||  |||| |||||||||||||||||||    
T  2056 cacttattctattaaataataaaagtaaccatttaataaaatacaccacacca 2108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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