View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0846_high_109 (Length: 322)
Name: NF0846_high_109
Description: NF0846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0846_high_109 |
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Alignment Details
Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 6738900 - 6738786
Alignment:
| Q |
74 |
cacagaaatgcataatgtgtgataataagagctcaaaatgggagagggaaataacaaattataaagatagctttgaagtcacctaaattgaaatgagcag |
173 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
6738900 |
cacagaaatgcataatgtgtgataa---gagctcaaaatgggagagggaaataacaaattata--gatagctttgaagtcacctaaattgaaatgagcag |
6738806 |
T |
|
| Q |
174 |
ttgaaatagttttacccttg |
193 |
Q |
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|||||||||||||||||||| |
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| T |
6738805 |
ttgaaatagttttacccttg |
6738786 |
T |
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