View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0846_high_120 (Length: 310)
Name: NF0846_high_120
Description: NF0846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0846_high_120 |
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Alignment Details
Target: chr6 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 182 - 298
Target Start/End: Complemental strand, 17221887 - 17221771
Alignment:
| Q |
182 |
gctataaataaatatctcactctgctcaatcaaatcaaatgttaagttaagtagtatatcatattgtttaatgtacattatcattctccaccatatgctt |
281 |
Q |
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|||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17221887 |
gctataaataaatatctcactctgctcaatcaaatccaattttaagttaagtagtatatcatattgtttaatgtacattatcattctccaccatatgctt |
17221788 |
T |
|
| Q |
282 |
caagaggtccctatctc |
298 |
Q |
| |
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||||||||||||||||| |
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| T |
17221787 |
caagaggtccctatctc |
17221771 |
T |
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