View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0846_high_172 (Length: 251)
Name: NF0846_high_172
Description: NF0846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0846_high_172 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 87 - 251
Target Start/End: Original strand, 4926750 - 4926913
Alignment:
| Q |
87 |
attttaaagggatcaaaaacatatatataacccattttttaataactatgtaaaactcaaataaaattaagagtatataacggagggagtacctattaac |
186 |
Q |
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| T |
4926750 |
atttaaaagggaccaaaaacatatatataacccattttttaataaccatgtaaaactcaaataaaattaagagtatataaaggagggagtacctattaac |
4926849 |
T |
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| Q |
187 |
tcggaaaagnnnnnnnntacatactttatttttgaattaagagtaatttttgaattgacacaaat |
251 |
Q |
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|||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4926850 |
tcggaaga-aaaaaaagtacatactttatttttgaattaagagtaatttttgaattgacacaaat |
4926913 |
T |
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