View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0846_high_177 (Length: 251)
Name: NF0846_high_177
Description: NF0846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0846_high_177 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 10 - 251
Target Start/End: Original strand, 40077648 - 40077889
Alignment:
| Q |
10 |
gcagagaaagtaagtgaacgttatggtgagatgagggaagagtatgttaagaatttaggtgacatgagaagaccttttattacacattttacagggtgcc |
109 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40077648 |
gcagagaaagtaagtgaacgttatggtgagatgagggaagagtatgttaagaatttaggtgacatgagaagaccttttattacacattttacagggtgcc |
40077747 |
T |
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| Q |
110 |
aaccttgtaatggtcaccataatccaatgtatgctgcagatgattgctggaatggcatggagagagctctcaattttgctgataatcaggtgttgcgcaa |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40077748 |
aaccttgtaatggtcaccataatccaatgtatgctgcagatgattgctggaatggcatggagagagctctcaattttgctgataatcaggtgttgcgcaa |
40077847 |
T |
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| Q |
210 |
gtttggcttcattcatccaaatctattggataagtctgtttc |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
40077848 |
gtttggcttcattcatccaaatctattggataagtctgtttc |
40077889 |
T |
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