View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0846_high_193 (Length: 203)
Name: NF0846_high_193
Description: NF0846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0846_high_193 |
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Alignment Details
Target: chr5 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 34127211 - 34127034
Alignment:
| Q |
1 |
agagtcttggaattattagatttcatcacaatgatgaactaaccaaatcccaactcctcctaatgatatatagaaccaaggtctaaaggttaggtaatta |
100 |
Q |
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| T |
34127211 |
agagtcttggaattattagatttcatcacaatgatgaactaaccaaatcccaactcctcctaatgatatatagaaccaaggtctaaaggttaggtaatta |
34127112 |
T |
|
| Q |
101 |
ctaaagtaattgtcaccttctttcaaggtatgtgtgtgttccttatcaatatatcccctattcttatggttacctatg |
178 |
Q |
| |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
34127111 |
ctaaagtaattgtcaccctctttcaaggtatgtgtgtgttccttatcaatataccccctattcttatggttacctatg |
34127034 |
T |
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